RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HYLS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000198331

Ensembl transcript IDs: ENST00000356438.7, ENST00000425380.7, ENST00000526028.1

Found 141 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGCCAGCGCACACCGTaGCCTCCAGGGGCTGCGGCC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGQRTP*PPGAAA
Trigger: GGCCGCAGCCCCTGGAGGTCACGGTGTGCGCTGGCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGTGACCTCCAGGGGCTaGGGCCCGCCGCGCACATCG +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNVTSRG*GPPRTS
Trigger: CGATGTGCGCGGCGGGCCGCAGCCCCTGGAGGTCAC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCGCAGTCGCCCCGCCTaGCCGTGGGCGTGGCTTGGA +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNRSRPA*PWAWLG
Trigger: TCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGCCGTGGGCGTGGCTTaGACCCAGGTCGCTAGCGGC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNAVGVA*TQVASG
Trigger: GCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGCCTGTAGCTCACGCTaGCCCGGCCGCCTCCCTCAG +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIACSSR*PGRLPQ
Trigger: CTGAGGGAGGCGGCCGGGGCAGCGTGAGCTACAGGC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGCCTGGCCGTGGGCGTaGCTTGGACCCAGGTCGCTA +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNAWPWA*LGPRSL
Trigger: TAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCGGAAGTCCGCTCTCTaGACCGCGTCCTGCCAGTCG +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNRKSAL*TASCQS
Trigger: CGACTGGCAGGACGCGGTGCAGAGAGCGGACTTCCG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000425380.7
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGCACCGTCCCGACGGTaGGAAAAGGAGCGAGGGCTC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNAPSRR*EKERGL
Trigger: GAGCCCTCGCTCCTTTTCCCACCGTCGGGACGGTGC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCTCTGCACCGCGTCCTaGCAGTCGCCAGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSILCTAS*QSPAEH
Trigger: GTGCTCTGCTGGCGACTGGCAGGACGCGGTGCAGAG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000425380.7
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGGAAGCTGCCACTCTaGACCGTCCCGACGGTGGGA +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGKLPL*TVPTVG
Trigger: TCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCAGGAACGCAGACGTTaGGGACGGCTCGCCAGGCAG +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIQERRR*GRLARQ
Trigger: CTGCCTGGCGAGCCGTCCCCAACGTCTGCGTTCCTG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATACTCCTAACCTCAGGTaGTCTGCCCGCCTTGGCCTC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNTPNLR*SARLGL
Trigger: GAGGCCAAGGCGGGCAGATCACCTGAGGTTAGGAGT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTCCACGGAGGGAAGCTaGCACTCTGCACCGTCCCGA +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSISTEGS*HSAPSR
Trigger: TCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGCTCGACAAAGCATCTaGTCTCGGACACCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNARQSI*SRTPQR
Trigger: ACGCTGGGGTGTCCGAGAGCAGATGCTTTGTCGAGC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCTACCCGGTCTGTCTTaGCCCGGTTTCGGCTTAACT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNLPGLS*PGFGLT
Trigger: AGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGCTCGACAAAGCATCTaGTCTCGGACACCCCAGCGT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIARQSI*SRTPQR
Trigger: ACGCTGGGGTGTCCGAGAGCAGATGCTTTGTCGAGC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGTGATCTGCCCGCCTTaGCCTCCCTCCCAAAATGTG +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIVICPP*PPSQNV
Trigger: CACATTTTGGGAGGGAGGCCAAGGCGGGCAGATCAC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCTTCCCTGGGGCTACTaGAGCTTTACTGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNLPWGY*SFTVGI
Trigger: GATCCCTACAGTAAAGCTTCAGTAGCCCCAGGGAAG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTCCTTCACCCTGCCCTaGACAGATGTGGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNSFTLP*TDVGKS
Trigger: GCTTTTACCCACATCTGTGCAGGGCAGGGTGAAGGA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATACATCTCCTTCACCCTaGCCTGCACAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNTSPSP*PAQMWV
Trigger: TACCCACATCTGTGCAGGGCAGGGTGAAGGAGATGT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCTACCCGGTCTGTCTTaGCCCGGTTTCGGCTTAACT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSILPGLS*PGFGLT
Trigger: AGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCCTTGGACGGTTCCATaGTGCAGTCCACAAAAGGTG +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNPWTVP*CSPQKV
Trigger: CACCTTTTGTGGACTGCAGCATGGAACCGTCCAAGG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGGCTTTCGGAGTCTTTaGGAGGCCTCAGAGACTGTT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNGFRSL*EASETV
Trigger: AACAGTCTCTGAGGCCTCCCAAAGACTCCGAAAGCC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCTTCCCTGGGGCTACTaGAGCTTTACTGTAGGGATC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSILPWGY*SFTVGI
Trigger: GATCCCTACAGTAAAGCTTCAGTAGCCCCAGGGAAG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGAAGCTTCCTGGGTATaGCACCATTTGCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNEASWV*HHLQGH
Trigger: GTGACCTTGCAAATGGTGTCATACCCAGGAAGCTTC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTCCTTCACCCTGCCCTaGACAGATGTGGGTAAAAGC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSISFTLP*TDVGKS
Trigger: GCTTTTACCCACATCTGTGCAGGGCAGGGTGAAGGA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTACATCTCCTTCACCCTaGCCTGCACAGATGTGGGTA +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSITSPSP*PAQMWV
Trigger: TACCCACATCTGTGCAGGGCAGGGTGAAGGAGATGT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTGCCCTGCACAGATGTaGGTAAAAGCTGTAGCAGCT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNCPAQM*VKAVAA
Trigger: AGCTGCTACAGCTTTTACCCACATCTGTGCAGGGCA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGAAGCTTCCTGGGTATaGCACCATTTGCAAGGTCAC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIEASWV*HHLQGH
Trigger: GTGACCTTGCAAATGGTGTCATACCCAGGAAGCTTC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTTTGGATTGGGGTTCTaGTCGACAAAGCATCTGCTC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNFGLGF*STKHLL
Trigger: GAGCAGATGCTTTGTCGAGCAGAACCCCAATCCAAA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGGGTATGACACCATTTaGAAGGTCACAACGAACACC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNGYDTI*KVTTNT
Trigger: GGTGTTCGTTGTGACCTTGCAAATGGTGTCATACCC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGTCTTGTTCGTAAGCTaGAGAGCCCATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNVLFVS*RAHSFS
Trigger: AGAGAAGGAATGGGCTCTCCAGCTTACGAACAAGAC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATAGGACTTGGGTCTGCTaGCAACAATCAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNRTWVC*QQSGLV
Trigger: AACAAGACCTGATTGTTGCCAGCAGACCCAAGTCCT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCGGTTTCGGCTTAACTaGTCCAGCTTTGGGAGAATA +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNRFRLN*SSFGRI
Trigger: TATTCTCCCAAAGCTGGACCAGTTAAGCCGAAACCG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATAAAAGCTGTAGCAGCTaGCAACATTCGTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNKSCSS*QHSFFW
Trigger: CCAGAAGAACGAATGTTGGCAGCTGCTACAGCTTTT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGGTATGACACCATTTaGAAGGTCACAACGAACACC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGYDTI*KVTTNT
Trigger: GGTGTTCGTTGTGACCTTGCAAATGGTGTCATACCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCTTTCTCTTCATCACTaGCTTTCGGAGTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNLSLHH*LSESLG
Trigger: TCCCAAAGACTCCGAAAGCCAGTGATGAAGAGAAAG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGTCTTGTTCGTAAGCTaGAGAGCCCATTCCTTCTCT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIVLFVS*RAHSFS
Trigger: AGAGAAGGAATGGGCTCTCCAGCTTACGAACAAGAC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTAGGACTTGGGTCTGCTaGCAACAATCAGGTCTTGTT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIRTWVC*QQSGLV
Trigger: AACAAGACCTGATTGTTGCCAGCAGACCCAAGTCCT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATATATATGCTGAGGTTTaGATTGGGGTTCTGCTCGAC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNIYAEV*IGVLLD
Trigger: GTCGAGCAGAACCCCAATCCAAACCTCAGCATATAT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCTCAGAGACTGTTTCTaGAGGGACATTACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNLRDCF*RDITFY
Trigger: GTAGAAAGTAATGTCCCTTCAGAAACAGTCTCTGAG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGGACATATATATGCTaGGGTTTGGATTGGGGTTCT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGTYIC*GLDWGS
Trigger: AGAACCCCAATCCAAACCTCAGCATATATATGTCCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGGGCCCTTACTAATTTaGCAAAATAGAAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNGPLLI*QNRKTR
Trigger: CCTGGTCTTTCTATTTTGTCAAATTAGTAAGGGCCC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTTCCACTCTTACTCCTaGTTTCTACTGTCTTGCCAC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIFHSYS*FLLSCH
Trigger: GTGGCAAGACAGTAGAAAGCAGGAGTAAGAGTGGAA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR GCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCACTGTAGGACCTTCTaGTTTCATTTCCACTCTTAC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNHCRTF*FHFHSY
Trigger: GTAAGAGTGGAAATGAAAGCAGAAGGTCCTACAGTG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTAAAAGCTGTAGCAGCTaGCAACATTCGTTCTTCTGG +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIKSCSS*QHSFFW
Trigger: CCAGAAGAACGAATGTTGGCAGCTGCTACAGCTTTT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCTTTCTCTTCATCACTaGCTTTCGGAGTCTTTGGGA +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSILSLHH*LSESLG
Trigger: TCCCAAAGACTCCGAAAGCCAGTGATGAAGAGAAAG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTATATATGCTGAGGTTTaGATTGGGGTTCTGCTCGAC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIIYAEV*IGVLLD
Trigger: GTCGAGCAGAACCCCAATCCAAACCTCAGCATATAT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCTCAGAGACTGTTTCTaGAGGGACATTACTTTCTAC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSILRDCF*RDITFY
Trigger: GTAGAAAGTAATGTCCCTTCAGAAACAGTCTCTGAG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCGTAATTCCTTTCTATaGTCTTCACCAGGTAAACGT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNRNSFL*SSPGKR
Trigger: ACGTTTACCTGGTGAAGATCATAGAAAGGAATTACG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTGCAATTGCTGGATTTaGGTGGCAATTTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNCNCWI*VAIWKY
Trigger: ATACTTCCAAATTGCCACTCAAATCCAGCAATTGCA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGGCCCTTACTAATTTaGCAAAATAGAAAGACCAGG +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGPLLI*QNRKTR
Trigger: CCTGGTCTTTCTATTTTGTCAAATTAGTAAGGGCCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR GCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTGCTTTCTACTGTCTTaGCACCTTCAGGTCCTTATT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSICFLLS*HLQVLI
Trigger: AATAAGGACCTGAAGGTGGCAAGACAGTAGAAAGCA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTCATATTGGATAGATTaGGCTTCTCTCCTGACATCT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNSYWID*ASLLTS
Trigger: AGATGTCAGGAGAGAAGCCCAATCTATCCAATATGA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTTCTGTACCAGATTCTaGTTCACTGATAATCGACTC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIFCTRF*FTDNRL
Trigger: GAGTCGATTATCAGTGAATCAGAATCTGGTACAGAA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCGTAATTCCTTTCTATaGTCTTCACCAGGTAAACGT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIRNSFL*SSPGKR
Trigger: ACGTTTACCTGGTGAAGATCATAGAAAGGAATTACG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATAAGACCAATGATAGGTaGAGTCCTTACCATAAAATG +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNKTNDR*SPYHKM
Trigger: CATTTTATGGTAAGGACTTCACCTATCATTGGTCTT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCATCTGATACCAATGTaGTATATAGCTAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNHLIPM*YIARKD
Trigger: GTCTTTCCTAGCTATATATCACATTGGTATCAGATG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTGCAATTGCTGGATTTaGGTGGCAATTTGGAAGTAT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSICNCWI*VAIWKY
Trigger: ATACTTCCAAATTGCCACTCAAATCCAGCAATTGCA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCAACATTCGTTCTTCTaGATCCATATTAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNQHSFF*IHISPY
Trigger: ATATGGGCTAATATGGATCCAGAAGAACGAATGTTG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATATTGCTGGATTTGAGTaGCAATTTGGAAGTATCATC +
Preference number: 4 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNIAGFE*QFGSII
Trigger: GATGATACTTCCAAATTGCCACTCAAATCCAGCAAT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTAAGACCAATGATAGGTaGAGTCCTTACCATAAAATG +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIKTNDR*SPYHKM
Trigger: CATTTTATGGTAAGGACTTCACCTATCATTGGTCTT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR TCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCATCTGATACCAATGTaGTATATAGCTAGGAAAGAC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIHLIPM*YIARKD
Trigger: GTCTTTCCTAGCTATATATCACATTGGTATCAGATG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCAACATTCGTTCTTCTaGATCCATATTAGCCCATAT +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIQHSFF*IHISPY
Trigger: ATATGGGCTAATATGGATCCAGAAGAACGAATGTTG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CCA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTATTGCTGGATTTGAGTaGCAATTTGGAAGTATCATC +
Preference number: 4 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIIAGFE*QFGSII
Trigger: GATGATACTTCCAAATTGCCACTCAAATCCAGCAAT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 90 bp CAAAGACCGCGGCGGCGGCCAGCGCACACCGTGACCTCCAGGGGCTaGGGCCCGCCGCGCACATCGCCTGTAGCTCACGCTGCCCCGGCC +
Preference number: 5 (lower is better)
Translates to: QRPRRRPAHTVTSRG*GPPRTSPVAHAAPA
Trigger: GGCCGGGGCAGCGTGAGCTACAGGCGATGTGCGCGGCGGGCCGCAGCCCCTGGAGGTCACGGTGTGCGCTGGCCGCCGCCGCGGTCTTTG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS GCA 90 bp CTCCAGGGGCTGCGGCCCGCCGCGCACATCGCCTGTAGCTCACGCTaGCCCGGCCGCCTCCCTCAGGAACGCAGACGTTGGGGACGGCTC +
Preference number: 5 (lower is better)
Translates to: LQGLRPAAHIACSSR*PGRLPQERRRWGRL
Trigger: GAGCCGTCCCCAACGTCTGCGTTCCTGAGGGAGGCGGCCGGGGCAGCGTGAGCTACAGGCGATGTGCGCGGCGGGCCGCAGCCCCTGGAG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp CAACGGCAAAGCTCGCAGTCGCCCCGCCTGGCCGTGGGCGTGGCTTaGACCCAGGTCGCTAGCGGCCTTCGGGACTCCCCTCCAGCCCTG +
Preference number: 5 (lower is better)
Translates to: QRQSSQSPRLAVGVA*TQVASGLRDSPPAL
Trigger: CAGGGCTGGAGGGGAGTCCCGAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCCGTTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp GCTCCGCCTTTCAACGGCAAAGCTCGCAGTCGCCCCGCCTGGCCGTaGGCGTGGCTTGGACCCAGGTCGCTAGCGGCCTTCGGGACTCCC +
Preference number: 5 (lower is better)
Translates to: APPFNGKARSRPAWP*AWLGPRSLAAFGTP
Trigger: GGGAGTCCCGAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCCGTTGAAAGGCGGAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp CTGGAATCCACGGAGGGAAGCTGCCACTCTGCACCGTCCCGACGGTaGGAAAAGGAGCGAGGGCTCCCGCCGCAGTGGGCCGGCAGCCAC +
Preference number: 5 (lower is better)
Translates to: LESTEGSCHSAPSRR*EKERGLPPQWAGSH
Trigger: GTGGCTGCCGGCCCACTGCGGCGGGAGCCCTCGCTCCTTTTCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGATTCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp CCTTTCAACGGCAAAGCTCGCAGTCGCCCCGCCTGGCCGTGGGCGTaGCTTGGACCCAGGTCGCTAGCGGCCTTCGGGACTCCCCTCCAG +
Preference number: 5 (lower is better)
Translates to: PFNGKARSRPAWPWA*LGPRSLAAFGTPLQ
Trigger: CTGGAGGGGAGTCCCGAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCCGTTGAAAGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp AGACACGCTCCGCCTTTCAACGGCAAAGCTCGCAGTCGCCCCGCCTaGCCGTGGGCGTGGCTTGGACCCAGGTCGCTAGCGGCCTTCGGG +
Preference number: 5 (lower is better)
Translates to: RHAPPFNGKARSRPA*PWAWLGPRSLAAFG
Trigger: CCCGAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCCGTTGAAAGGCGGAGCGTGTCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS GCA 90 bp GCTCGCCAGGCAGGACCTGGAATCCACGGAGGGAAGCTGCCACTCTaGACCGTCCCGACGGTGGGAAAAGGAGCGAGGGCTCCCGCCGCA +
Preference number: 5 (lower is better)
Translates to: ARQAGPGIHGGKLPL*TVPTVGKGARAPAA
Trigger: TGCGGCGGGAGCCCTCGCTCCTTTTCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGATTCCAGGTCCTGCCTGGCGAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS GCA 90 bp TGGGGACGGCTCGCCAGGCAGGACCTGGAATCCACGGAGGGAAGCTaGCACTCTGCACCGTCCCGACGGTGGGAAAAGGAGCGAGGGCTC +
Preference number: 5 (lower is better)
Translates to: WGRLARQDLESTEGS*HSAPSRRWEKERGL
Trigger: GAGCCCTCGCTCCTTTTCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGATTCCAGGTCCTGCCTGGCGAGCCGTCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp TCCCTCAGGAACGCAGACGTTGGGGACGGCTCGCCAGGCAGGACCTaGAATCCACGGAGGGAAGCTGCCACTCTGCACCGTCCCGACGGT +
Preference number: 5 (lower is better)
Translates to: SLRNADVGDGSPGRT*NPRREAATLHRPDG
Trigger: ACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGATTCCAGGTCCTGCCTGGCGAGCCGTCCCCAACGTCTGCGTTCCTGAGGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 90 bp AAATACCGGGCTACCCGGTCTGTCTTGCCCCGGTTTCGGCTTAACTaGTCCAGCTTTGGGAGAATAAAGGACTTGGGTCTGCTGGCAACA +
Preference number: 5 (lower is better)
Translates to: KYRATRSVLPRFRLN*SSFGRIKDLGLLAT
Trigger: TGTTGCCAGCAGACCCAAGTCCTTTATTCTCCCAAAGCTGGACCAGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGCCCGGTATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CCA 90 bp TGGGCTTCTCTCCTGACATCTCCTTCACCCTGCCCTGCACAGATGTaGGTAAAAGCTGTAGCAGCTGCCAACATTCGTTCTTCTGGATCC +
Preference number: 5 (lower is better)
Translates to: WASLLTSPSPCPAQM*VKAVAAANIRSSGS
Trigger: GGATCCAGAAGAACGAATGTTGGCAGCTGCTACAGCTTTTACCCACATCTGTGCAGGGCAGGGTGAAGGAGATGTCAGGAGAGAAGCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 90 bp TTGGATAGATTGGGCTTCTCTCCTGACATCTCCTTCACCCTGCCCTaGACAGATGTGGGTAAAAGCTGTAGCAGCTGCCAACATTCGTTC +
Preference number: 5 (lower is better)
Translates to: LDRLGFSPDISFTLP*TDVGKSCSSCQHSF
Trigger: GAACGAATGTTGGCAGCTGCTACAGCTTTTACCCACATCTGTGCAGGGCAGGGTGAAGGAGATGTCAGGAGAGAAGCCCAATCTATCCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS TCA 90 bp CGACAAAGCATCTGCTCTCGGACACCCCAGCGTAATTCCTTTCTATaGTCTTCACCAGGTAAACGTATTGAGTCCCAGTCCCGTTTGTAC +
Preference number: 5 (lower is better)
Translates to: RQSICSRTPQRNSFL*SSPGKRIESQSRLY
Trigger: GTACAAACGGGACTGGGACTCAATACGTTTACCTGGTGAAGATCATAGAAAGGAATTACGCTGGGGTGTCCGAGAGCAGATGCTTTGTCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 90 bp TCCTTCACCCTGCCCTGCACAGATGTGGGTAAAAGCTGTAGCAGCTaGCAACATTCGTTCTTCTGGATCCATATTAGCCCATATTTGTCC +
Preference number: 5 (lower is better)
Translates to: SFTLPCTDVGKSCSS*QHSFFWIHISPYLS
Trigger: GGACAAATATGGGCTAATATGGATCCAGAAGAACGAATGTTGGCAGCTGCTACAGCTTTTACCCACATCTGTGCAGGGCAGGGTGAAGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTCAGGAACGCAGACGTaGGGGACGGCTCGCCAGGCA +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNSGTQT*GTARQA
Trigger: TGCCTGGCGAGCCGTCCCCAACGTCTGCGTTCCTGA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGCTACCCGGTCTGTCTaGCCCCGGTTTCGGCTTAAC +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNATRSV*PRFRLN
Trigger: GTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGTGATCTGCCCGCCTaGGCCTCCCTCCCAAAATGT +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGDLPA*ASLPKC
Trigger: ACATTTTGGGAGGGAGGCCAAGGCGGGCAGATCACC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGCTACCCGGTCTGTCTaGCCCCGGTTTCGGCTTAAC +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIATRSV*PRFRLN
Trigger: GTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCAGGGTTTCGCCATGTaGGCCAGGCTGATCTTGAAC +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNQGFAM*ARLILN
Trigger: GTTCAAGATCAGCCTGGCCAACATGGCGAAACCCTG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTGGCTTTCGGAGTCTTaGGGAGGCCTCAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNWLSES*GGLRDC
Trigger: ACAGTCTCTGAGGCCTCCCAAAGACTCCGAAAGCCA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTGGCTTTCGGAGTCTTaGGGAGGCCTCAGAGACTGT +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIWLSES*GGLRDC
Trigger: ACAGTCTCTGAGGCCTCCCAAAGACTCCGAAAGCCA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGGCAACAATCAGGTCTaGTTCGTAAGCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNGNNQV*FVSWRA
Trigger: GGCTCTCCAGCTTACGAACAAGACCTGATTGTTGCC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGAGTCCCAGTCCCGTTaGTACTCAAAATACCGGGCT +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNESQSR*YSKYRA
Trigger: AGCCCGGTATTTTGAGTACAAACGGGACTGGGACTC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGCAACAATCAGGTCTaGTTCGTAAGCTGGAGAGCC +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGNNQV*FVSWRA
Trigger: GGCTCTCCAGCTTACGAACAAGACCTGATTGTTGCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGGGAGAATAAAGGACTaGGGTCTGCTGGCAACAATC +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNGRIKD*GLLATI
Trigger: GATTGTTGCCAGCAGACCCAAGTCCTTTATTCTCCC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGAGTCCCAGTCCCGTTaGTACTCAAAATACCGGGCT +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIESQSR*YSKYRA
Trigger: AGCCCGGTATTTTGAGTACAAACGGGACTGGGACTC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCACCAGGTAAACGTATaGAGTCCCAGTCCCGTTTGT +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNHQVNV*SPSPVC
Trigger: ACAAACGGGACTGGGACTCAATACGTTTACCTGGTG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATATGCTGAGGTTTGGATaGGGGTTCTGCTCGACAAAG +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNMLRFG*GFCSTK
Trigger: CTTTGTCGAGCAGAACCCCAATCCAAACCTCAGCAT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATCTGCTTTCTACTGTCTaGCCACCTTCAGGTCCTTAT +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNLLSTV*PPSGPY
Trigger: ATAAGGACCTGAAGGTGGCAAGACAGTAGAAAGCAG...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356438.7
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGTAGAAGTTCTTCCATaGCTTCCCCTACACTGTAGG +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNVEVLP*LPLHCR
Trigger: CCTACAGTGTAGGGGAAGCAATGGAAGAACTTCTAC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGGGAGAATAAAGGACTaGGGTCTGCTGGCAACAATC +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIGRIKD*GLLATI
Trigger: GATTGTTGCCAGCAGACCCAAGTCCTTTATTCTCCC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTCACCAGGTAAACGTATaGAGTCCCAGTCCCGTTTGT +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIHQVNV*SPSPVC
Trigger: ACAAACGGGACTGGGACTCAATACGTTTACCTGGTG...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTATGCTGAGGTTTGGATaGGGGTTCTGCTCGACAAAG +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIMLRFG*GFCSTK
Trigger: CTTTGTCGAGCAGAACCCCAATCCAAACCTCAGCAT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS TCA 90 bp TGGAACTGTACATTCATCAGCCTTTGTCTTAAGTCCCAGAGATCCTaGTCATTTTCTGTACCAGATTCTGATTCACTGATAATCGACTCA +
Preference number: 5 (lower is better)
Translates to: WNCTFISLCLKSQRS*SFSVPDSDSLIIDS
Trigger: TGAGTCGATTATCAGTGAATCAGAATCTGGTACAGAAAATGATCAGGATCTCTGGGACTTAAGACAAAGGCTGATGAATGTACAGTTCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTGTAGAAGTTCTTCCATaGCTTCCCCTACACTGTAGG +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIVEVLP*LPLHCR
Trigger: CCTACAGTGTAGGGGAAGCAATGGAAGAACTTCTAC...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATATCATATTGGATAGATaGGGCTTCTCTCCTGACATC +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNIILDR*GFSPDI
Trigger: GATGTCAGGAGAGAAGCCCAATCTATCCAATATGAT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATACTGTAGGGATCATATaGGATAGATTGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNTVGII*DRLGFS
Trigger: AGAGAAGCCCAATCTATCCAATATGATCCCTACAGT...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTATCATATTGGATAGATaGGGCTTCTCTCCTGACATC +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSIIILDR*GFSPDI
Trigger: GATGTCAGGAGAGAAGCCCAATCTATCCAATATGAT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTACTGTAGGGATCATATaGGATAGATTGGGCTTCTCT +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSITVGII*DRLGFS
Trigger: AGAGAAGCCCAATCTATCCAATATGATCCCTACAGT...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTCAAATGAAGATTCCTaGTCTTCCTGGAACTGTACA +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNSNEDS*SSWNCT
Trigger: TGTACAGTTCCAGGAAGACAAGGAATCTTCATTTGA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATGCAAATGAGCTGATCTaGAGAAATTCCTTGGTATTC +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNANELI*RNSLVF
Trigger: GAATACCAAGGAATTTCTCAAGATCAGCTCATTTGC...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp ATCTTGCAATTGCTGGATTTGAGTGGCAATTTGGAAGTATCATCTGATACCAATTTGCAATTGCTGGATTaGAGTGGCAATTTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: ILQLLDLSGNLEVSSDTNLQLLD*SGNLEV
Trigger: TACTTCCAAATTGCCACTCAAATCCAGCAATTGCAA...ATTGGTATCAGATGATACTTCCAAATTGCCACTCAAATCCAGCAATTGCAAGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTCAAATGAAGATTCCTaGTCTTCCTGGAACTGTACA +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSISNEDS*SSWNCT
Trigger: TGTACAGTTCCAGGAAGACAAGGAATCTTCATTTGA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS-3UTR CAA 90 bp GAAGTCCTTACCATAAAATGTTTCGAAGAGCTTCTCAAGACAGTTGTTTCTATTTTGCAATTGCTGGATTaGAGTGGCAATTTGGAAGTA +
Preference number: 5 (lower is better)
Translates to: EVLTIKCFEELLKTVVSILQLLD*SGNLEV
Trigger: TACTTCCAAATTGCCACTCAAATCCAGCAATTGCAA...AATAGAAACAACTGTCTTGAGAAGCTCTTCGAAACATTTTATGGTAAGGACTTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 72 bp CGGCGGCGGCCAGCGCACACCGTGACCTCCAGGGGCTaGGGCCCGCCGCGCACATCGCCTGTAGCTCACGCT +
Preference number: 6 (lower is better)
Translates to: RRRPAHTVTSRG*GPPRTSPVAHA
Trigger: AGCGTGAGCTACAGGCGATGTGCGCGGCGGGCCGCAGCCCCTGGAGGTCACGGTGTGCGCTGGCCGCCGCCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp CGACGGTGGGAAAAGGAGCGAGGGCTCCCGCCGCAGTaGGCCGGCAGCCACCAGGTCCCCGCGTCCCTCCGC +
Preference number: 6 (lower is better)
Translates to: RRWEKERGLPPQ*AGSHQVPASLR
Trigger: GCGGAGGGACGCGGGGACCTGGTGGCTGCCGGCCCACTGCGGCGGGAGCCCTCGCTCCTTTTCCCACCGTCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS GCA 72 bp CTGCGGCCCGCCGCGCACATCGCCTGTAGCTCACGCTaGCCCGGCCGCCTCCCTCAGGAACGCAGACGTTGG +
Preference number: 6 (lower is better)
Translates to: LRPAAHIACSSR*PGRLPQERRRW
Trigger: CCAACGTCTGCGTTCCTGAGGGAGGCGGCCGGGGCAGCGTGAGCTACAGGCGATGTGCGCGGCGGGCCGCAG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp AGCTCGCAGTCGCCCCGCCTGGCCGTGGGCGTGGCTTaGACCCAGGTCGCTAGCGGCCTTCGGGACTCCCCT +
Preference number: 6 (lower is better)
Translates to: SSQSPRLAVGVA*TQVASGLRDSP
Trigger: AGGGGAGTCCCGAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp CGCTGCCCCGGCCGCCTCCCTCAGGAACGCAGACGTTaGGGACGGCTCGCCAGGCAGGACCTGGAATCCACG +
Preference number: 6 (lower is better)
Translates to: RCPGRLPQERRR*GRLARQDLEST
Trigger: CGTGGATTCCAGGTCCTGCCTGGCGAGCCGTCCCCAACGTCTGCGTTCCTGAGGGAGGCGGCCGGGGCAGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp GGCAAAGCTCGCAGTCGCCCCGCCTGGCCGTGGGCGTaGCTTGGACCCAGGTCGCTAGCGGCCTTCGGGACT +
Preference number: 6 (lower is better)
Translates to: GKARSRPAWPWA*LGPRSLAAFGT
Trigger: AGTCCCGAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp ACGGAGGGAAGCTGCCACTCTGCACCGTCCCGACGGTaGGAAAAGGAGCGAGGGCTCCCGCCGCAGTGGGCC +
Preference number: 6 (lower is better)
Translates to: TEGSCHSAPSRR*EKERGLPPQWA
Trigger: GGCCCACTGCGGCGGGAGCCCTCGCTCCTTTTCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp CCGCCTTTCAACGGCAAAGCTCGCAGTCGCCCCGCCTaGCCGTGGGCGTGGCTTGGACCCAGGTCGCTAGCG +
Preference number: 6 (lower is better)
Translates to: PPFNGKARSRPA*PWAWLGPRSLA
Trigger: CGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCCGTTGAAAGGCGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CAA 72 bp ACGCTGCCCCGGCCGCCTCCCTCAGGAACGCAGACGTaGGGGACGGCTCGCCAGGCAGGACCTGGAATCCAC +
Preference number: 6 (lower is better)
Translates to: TLPRPPPSGTQT*GTARQAGPGIH
Trigger: GTGGATTCCAGGTCCTGCCTGGCGAGCCGTCCCCAACGTCTGCGTTCCTGAGGGAGGCGGCCGGGGCAGCGT
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp TTCAACGGCAAAGCTCGCAGTCGCCCCGCCTGGCCGTaGGCGTGGCTTGGACCCAGGTCGCTAGCGGCCTTC +
Preference number: 6 (lower is better)
Translates to: FNGKARSRPAWP*AWLGPRSLAAF
Trigger: GAAGGCCGCTAGCGACCTGGGTCCAAGCCACGCCCACGGCCAGGCGGGGCGACTGCGAGCTTTGCCGTTGAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS GCA 72 bp GCAGGACCTGGAATCCACGGAGGGAAGCTGCCACTCTaGACCGTCCCGACGGTGGGAAAAGGAGCGAGGGCT +
Preference number: 6 (lower is better)
Translates to: AGPGIHGGKLPL*TVPTVGKGARA
Trigger: AGCCCTCGCTCCTTTTCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGATTCCAGGTCCTGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS GCA 72 bp CTCGCCAGGCAGGACCTGGAATCCACGGAGGGAAGCTaGCACTCTGCACCGTCCCGACGGTGGGAAAAGGAG +
Preference number: 6 (lower is better)
Translates to: LARQDLESTEGS*HSAPSRRWEKE
Trigger: CTCCTTTTCCCACCGTCGGGACGGTGCAGAGTGGCAGCTTCCCTCCGTGGATTCCAGGTCCTGCCTGGCGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000526028.1
CDS CCA 72 bp GCTACCCGGTCTGTCTTGCCCCGGTTTCGGCTTAACTaGTCCAGCTTTGGGAGAATAAAGGACTTGGGTCTG +
Preference number: 6 (lower is better)
Translates to: ATRSVLPRFRLN*SSFGRIKDLGL
Trigger: CAGACCCAAGTCCTTTATTCTCCCAAAGCTGGACCAGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 72 bp CGTTTGTACTCAAAATACCGGGCTACCCGGTCTGTCTaGCCCCGGTTTCGGCTTAACTGGTCCAGCTTTGGG +
Preference number: 6 (lower is better)
Translates to: RLYSKYRATRSV*PRFRLNWSSFG
Trigger: CCCAAAGCTGGACCAGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGCCCGGTATTTTGAGTACAAACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 72 bp GTTTGTACTCAAAATACCGGGCTACCCGGTCTGTCTTaGCCCGGTTTCGGCTTAACTGGTCCAGCTTTGGGA +
Preference number: 6 (lower is better)
Translates to: VCTQNTGLPGLS*PGFGLTGPALG
Trigger: TCCCAAAGCTGGACCAGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGCCCGGTATTTTGAGTACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 90 bp TCCCAGTCCCGTTTGTACTCAAAATACCGGGCTACCCGGTCTGTCTaGCCCCGGTTTCGGCTTAACTGGTCCAGCTTTGGGAGAATAAAG +
Preference number: 6 (lower is better)
Translates to: SQSRLYSKYRATRSV*PRFRLNWSSFGRIK
Trigger: CTTTATTCTCCCAAAGCTGGACCAGTTAAGCCGAAACCGGGGCAAGACAGACCGGGTAGCCCGGTATTTTGAGTACAAACGGGACTGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 72 bp AAGAGGGAAGGGAAGCTTCCTGGGTATGACACCATTTaGAAGGTCACAACGAACACCCCAACGGAGTGCAGA +
Preference number: 6 (lower is better)
Translates to: KREGKLPGYDTI*KVTTNTPTECR
Trigger: TCTGCACTCCGTTGGGGTGTTCGTTGTGACCTTGCAAATGGTGTCATACCCAGGAAGCTTCCCTTCCCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CCA 72 bp CTCCTGACATCTCCTTCACCCTGCCCTGCACAGATGTaGGTAAAAGCTGTAGCAGCTGCCAACATTCGTTCT +
Preference number: 6 (lower is better)
Translates to: LLTSPSPCPAQM*VKAVAAANIRS
Trigger: AGAACGAATGTTGGCAGCTGCTACAGCTTTTACCCACATCTGTGCAGGGCAGGGTGAAGGAGATGTCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CCA 72 bp ATCTGGCTTTCTGCGCAGCACCTTTCTCTTCATCACTaGCTTTCGGAGTCTTTGGGAGGCCTCAGAGACTGT +
Preference number: 6 (lower is better)
Translates to: IWLSAQHLSLHH*LSESLGGLRDC
Trigger: ACAGTCTCTGAGGCCTCCCAAAGACTCCGAAAGCCAGTGATGAAGAGAAAGGTGCTGCGCAGAAAGCCAGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 72 bp GAAGGGACATTACTTTCTACATGTGGGTACTGTAGTTaGACAGGAAGAGCAGGTCGCTTCCCTGGGGCTACT +
Preference number: 6 (lower is better)
Translates to: EGTLLSTCGYCS*TGRAGRFPGAT
Trigger: AGTAGCCCCAGGGAAGCGACCTGCTCTTCCTGTGCAACTACAGTACCCACATGTAGAAAGTAATGTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 72 bp CTGCCCTGCACAGATGTGGGTAAAAGCTGTAGCAGCTaGCAACATTCGTTCTTCTGGATCCATATTAGCCCA +
Preference number: 6 (lower is better)
Translates to: LPCTDVGKSCSS*QHSFFWIHISP
Trigger: TGGGCTAATATGGATCCAGAAGAACGAATGTTGGCAGCTGCTACAGCTTTTACCCACATCTGTGCAGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 72 bp TCTTCACCAGGTAAACGTATTGAGTCCCAGTCCCGTTaGTACTCAAAATACCGGGCTACCCGGTCTGTCTTG +
Preference number: 6 (lower is better)
Translates to: SSPGKRIESQSR*YSKYRATRSVL
Trigger: CAAGACAGACCGGGTAGCCCGGTATTTTGAGTACAAACGGGACTGGGACTCAATACGTTTACCTGGTGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 90 bp CACCCCAGCGTAATTCCTTTCTATGATCTTCACCAGGTAAACGTATaGAGTCCCAGTCCCGTTTGTACTCAAAATACCGGGCTACCCGGT +
Preference number: 6 (lower is better)
Translates to: HPSVIPFYDLHQVNV*SPSPVCTQNTGLPG
Trigger: ACCGGGTAGCCCGGTATTTTGAGTACAAACGGGACTGGGACTCAATACGTTTACCTGGTGAAGATCATAGAAAGGAATTACGCTGGGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS TCA 72 bp TTGCACAGGAAGAGCAGGTCGCTTCCCTGGGGCTACTaGAGCTTTACTGTAGGGATCATATTGGATAGATTG +
Preference number: 6 (lower is better)
Translates to: LHRKSRSLPWGY*SFTVGIILDRL
Trigger: CAATCTATCCAATATGATCCCTACAGTAAAGCTTCAGTAGCCCCAGGGAAGCGACCTGCTCTTCCTGTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS TCA 72 bp ATCTGCTCTCGGACACCCCAGCGTAATTCCTTTCTATaGTCTTCACCAGGTAAACGTATTGAGTCCCAGTCC +
Preference number: 6 (lower is better)
Translates to: ICSRTPQRNSFL*SSPGKRIESQS
Trigger: GGACTGGGACTCAATACGTTTACCTGGTGAAGATCATAGAAAGGAATTACGCTGGGGTGTCCGAGAGCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 72 bp AATAAAGGACTTGGGTCTGCTGGCAACAATCAGGTCTaGTTCGTAAGCTGGAGAGCCCATTCCTTCTCTTTG +
Preference number: 6 (lower is better)
Translates to: NKGLGSAGNNQV*FVSWRAHSFSL
Trigger: CAAAGAGAAGGAATGGGCTCTCCAGCTTACGAACAAGACCTGATTGTTGCCAGCAGACCCAAGTCCTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 90 bp GGTCACAACGAACACCCCAACGGAGTGCAGACCTTTTCTTCTCTGTaGGTACTAGATAATTGTTTGGGACATATATATGCTGAGGTTTGG +
Preference number: 6 (lower is better)
Translates to: GHNEHPNGVQTFSSL*VLDNCLGHIYAEVW
Trigger: CCAAACCTCAGCATATATATGTCCCAAACAATTATCTAGTACCAACAGAGAAGAAAAGGTCTGCACTCCGTTGGGGTGTTCGTTGTGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS TCA 72 bp CTGGAGAGCCCATTCCTTCTCTTTGTAGAGAGCAAATaGGCTGATCTTGAGAAATTCCTTGGTATTCATGTG +
Preference number: 6 (lower is better)
Translates to: LESPFLLFVESK*ADLEKFLGIHV
Trigger: CACATGAATACCAAGGAATTTCTCAAGATCAGCTCATTTGCTCTCTACAAAGAGAAGGAATGGGCTCTCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 72 bp GTAATTCCTTTCTATGATCTTCACCAGGTAAACGTATaGAGTCCCAGTCCCGTTTGTACTCAAAATACCGGG +
Preference number: 6 (lower is better)
Translates to: VIPFYDLHQVNV*SPSPVCTQNTG
Trigger: CCCGGTATTTTGAGTACAAACGGGACTGGGACTCAATACGTTTACCTGGTGAAGATCATAGAAAGGAATTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS CAA 72 bp GAACACCCCAACGGAGTGCAGACCTTTTCTTCTCTGTaGGTACTAGATAATTGTTTGGGACATATATATGCT +
Preference number: 6 (lower is better)
Translates to: EHPNGVQTFSSL*VLDNCLGHIYA
Trigger: AGCATATATATGTCCCAAACAATTATCTAGTACCAACAGAGAAGAAAAGGTCTGCACTCCGTTGGGGTGTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000356438.7
ENST00000425380.7
ENST00000526028.1
CDS GCA 72 bp TTTCATTTCCACTCTTACTCCTGCTTTCTACTGTCTTaGCACCTTCAGGTCCTTATTTCAATGTATCTTGAT +
Preference number: 6 (lower is better)
Translates to: FHFHSYSCFLLS*HLQVLISMYLD
Trigger: ATCAAGATACATTGAAATAAGGACCTGAAGGTGGCAAGACAGTAGAAAGCAGGAGTAAGAGTGGAAATGAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356438.7