RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HYDIN (Homo sapiens)

Ensembl gene IDs: ENSG00000157423

Ensembl transcript IDs: ENST00000288168.14, ENST00000309900.11, ENST00000321489.9, ENST00000378856.8, ENST00000393567.7, ENST00000536785.1, ENST00000537789.1, ENST00000538248.5, ENST00000538382.1, ENST00000539447.5, ENST00000540892.1, ENST00000541601.5, ENST00000542283.1, ENST00000542890.1, ENST00000634268.1, ENST00000634392.1, ENST00000634515.1, ENST00000634745.1, ENST00000634869.1, ENST00000634987.1, ENST00000635049.1, ENST00000635131.1, ENST00000635355.1, ENST00000635365.1, ENST00000635381.2, ENST00000635523.1, ENST00000635582.1, ENST00000635596.1

Found 885 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CACTGGGGGCCCAGTGTGGAACGAGGCCAGGGAGCCCCATTCCCATaGTATTCTGTGCACAGTGCTCCTTGGAGTTCTGCCACACAGCTA +
Preference number: 1 (lower is better)
Translates to: HWGPSVERGQGAPFP*YSVHSAPWSSATQL
Trigger: TAGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCACAGAATACCATGGGAATGGGGCTCCCTGGCCTCGTTCCACACTGGGCCCCCAGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp CCTGCGAGCGATGATAGGATCAGGATGCCCTTGGTCTCACCCAGGTaGCTGGGCTCGAATAAGACTTCCACACTGGCTTCAGTGCCTCCC +
Preference number: 1 (lower is better)
Translates to: PASDDRIRMPLVSPR*LGSNKTSTLASVPP
Trigger: GGGAGGCACTGAAGCCAGTGTGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCCTATCATCGCTCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 90 bp GTCACCTCTGACTTGAGGCTCCTAAAGAAGTGGTTAGACTTAGCATaGCACACTCACTGGGGGCCCAGTGTGGAACGAGGCCAGGGAGCC +
Preference number: 1 (lower is better)
Translates to: VTSDLRLLKKWLDLA*HTHWGPSVERGQGA
Trigger: GGCTCCCTGGCCTCGTTCCACACTGGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 90 bp CATGCCTGCATTGGCATGAGCCTGTGGATGCCACCCCTGGAAGAGTaGACAGGTGGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAG +
Preference number: 1 (lower is better)
Translates to: HACIGMSLWMPPLEE*TGGMWGDTMWSGLQ
Trigger: CTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTGTGCACTCTTCCAGGGGTGGCATCCACAGGCTCATGCCAATGCAGGCATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CCA 90 bp TTGAGGCTCCTAAAGAAGTGGTTAGACTTAGCATGCCACACTCACTaGGGGCCCAGTGTGGAACGAGGCCAGGGAGCCCCATTCCCATGG +
Preference number: 1 (lower is better)
Translates to: LRLLKKWLDLACHTH*GPSVERGQGAPFPW
Trigger: CCATGGGAATGGGGCTCCCTGGCCTCGTTCCACACTGGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 90 bp AGGGACCTTGGGGCTTGGGAGGCAGAGCCATTCCAAAGAGGGGGATaGTATACTCTCCACCTGCGAGCGATGATAGGATCAGGATGCCCT +
Preference number: 1 (lower is better)
Translates to: RDLGAWEAEPFQRGG*YTLHLRAMIGSGCP
Trigger: AGGGCATCCTGATCCTATCATCGCTCGCAGGTGGAGAGTATATCATCCCCCTCTTTGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 90 bp TCTTTACGGCATTCATTCCCAAGAGGCCATCTTCTTCCAGTCTCCTaGCCCTCTTGTAGGAGGGCTGTGGGGGATGAGTGTGGGGAGCAG +
Preference number: 1 (lower is better)
Translates to: SLRHSFPRGHLLPVS*PSCRRAVGDECGEQ
Trigger: CTGCTCCCCACACTCATCCCCCACAGCCCTCCTACAAGAGGGGCAGGAGACTGGAAGAAGATGGCCTCTTGGGAATGAATGCCGTAAAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 90 bp CCAGTGTGGAACGAGGCCAGGGAGCCCCATTCCCATGGTATTCTGTaGACAGTGCTCCTTGGAGTTCTGCCACACAGCTACCCTGACATT +
Preference number: 1 (lower is better)
Translates to: PVWNEAREPHSHGIL*TVLLGVLPHSYPDI
Trigger: AATGTCAGGGTAGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCACAGAATACCATGGGAATGGGGCTCCCTGGCCTCGTTCCACACTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp TGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTGTGGTaGGGGGAGCTGGGATCTCTATTAGCCTTTCTCCAGGGCCTAGAC +
Preference number: 1 (lower is better)
Translates to: CSPAECYPRRGVYVW*GELGSLLAFLQGLD
Trigger: GTCTAGGCCCTGGAGAAAGGCTAATAGAGATCCCAGCTCCCCCCACCACACATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp ATGAGCCTGTGGATGCCACCCCTGGAAGAGTGCACAGGTGGAATGTaGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATG +
Preference number: 1 (lower is better)
Translates to: MSLWMPPLEECTGGM*GDTMWSGLQKVEAM
Trigger: CATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTGTGCACTCTTCCAGGGGTGGCATCCACAGGCTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR TCA 90 bp CAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTaGGCTTGGCTCTTGGTCCCAGGGAGAAGGAACTTCCTCCTCTCT +
Preference number: 1 (lower is better)
Translates to: QSQTSLEEGSHWGRI*AWLLVPGRRNFLLS
Trigger: AGAGAGGAGGAAGTTCCTTCTCCCTGGGACCAAGAGCCAAGCTCAGATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 90 bp TCTCACTCCCTTCACCAGGAGGGCAGCTCACAGTCAGCTTGGTGGTaGTGGGGGTTTTGCTGCCAGATGGGTTTCCTTCAAAGGAGACTG +
Preference number: 1 (lower is better)
Translates to: SHSLHQEGSSQSAWW*WGFCCQMGFLQRRL
Trigger: CAGTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACCCCCATCACCACCAAGCTGACTGTGAGCTGCCCTCCTGGTGAAGGGAGTGAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp CTCCTGATGAGGATGCAGCTGGCCAGCACCTTGATTTCAGCCTTGTaGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCC +
Preference number: 1 (lower is better)
Translates to: LLMRMQLASTLISAL*NPELRIQFTLGSQP
Trigger: GGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGCTGCATCCTCATCAGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp AAGGGGATGATTATGCTGTACCCGGCTCGGATCGAGAAGGGACCTTaGGGCTTGGGAGGCAGAGCCATTCCAAAGAGGGGGATGATATAC +
Preference number: 1 (lower is better)
Translates to: KGMIMLYPARIEKGP*GLGGRAIPKRGMIY
Trigger: GTATATCATCCCCCTCTTTGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGATCCGAGCCGGGTACAGCATAATCATCCCCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp TGGCTGGGCTCGAATAAGACTTCCACACTGGCTTCAGTGCCTCCCTaGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCT +
Preference number: 1 (lower is better)
Translates to: WLGSNKTSTLASVPP*PPGAALMSFSAWKS
Trigger: AGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGCACTGAAGCCAGTGTGGAAGTCTTATTCGAGCCCAGCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp GATCTTCTTGGGCCGCACAGACTCTCCAGCGCGAATGGTGAAGGCTaGGTTATCCACGATGATGGAGAAGGTCACCATGTGATAGAAGAC +
Preference number: 1 (lower is better)
Translates to: DLLGPHRLSSANGEG*VIHDDGEGHHVIED
Trigger: GTCTTCTATCACATGGTGACCTTCTCCATCATCGTGGATAACCCAGCCTTCACCATTCGCGCTGGAGAGTCTGTGCGGCCCAAGAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR TCA 90 bp AGAGACAGTGGGGATGCAGCAGAGAAAGTGATGATCAAAGGTCACTaGGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAG +
Preference number: 1 (lower is better)
Translates to: RDSGDAAEKVMIKGH*VMRWEETLKSISRK
Trigger: CTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAGTGACCTTTGATCATCACTTTCTCTGCTGCATCCCCACTGTCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 90 bp AATGCAGATTCTGATTCAACAAGTCTAGGGTGGGGCCTGAGGGCCTaGCTTTCTAACAAATTCCCAGGTGATGCTGATGCTGCAGGTCCA +
Preference number: 1 (lower is better)
Translates to: NADSDSTSLGWGLRA*LSNKFPGDADAAGP
Trigger: TGGACCTGCAGCATCAGCATCACCTGGGAATTTGTTAGAAAGGCAGGCCCTCAGGCCCCACCCTAGACTTGTTGAATCAGAATCTGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 90 bp GCTGCTGCCAAGGACAGTCTGGAAGTGAACAGGCTTTTCCGGAAGTaGTGGCGTGGCTTTCAGATAGAGCTCATATTGGTAGTAACCCAA +
Preference number: 1 (lower is better)
Translates to: AAAKDSLEVNRLFRK*WRGFQIELILVVTQ
Trigger: TTGGGTTACTACCAATATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCTGTTCACTTCCAGACTGTCCTTGGCAGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp GAGAAAAACCTAAAGGGAAGAAATGCACCCAATCTCAAACCAGCCTaGAAGAGGGTTCACACTGGGGCAGGATCTGAGCTTGGCTCTTGG +
Preference number: 1 (lower is better)
Translates to: EKNLKGRNAPNLKPA*KRVHTGAGSELGSW
Trigger: CCAAGAGCCAAGCTCAGATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTTCTTCCCTTTAGGTTTTTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp GCTGCCAAGGACAGTCTGGAAGTGAACAGGCTTTTCCGGAAGTGCTaGCGTGGCTTTCAGATAGAGCTCATATTGGTAGTAACCCAAGTC +
Preference number: 1 (lower is better)
Translates to: AAKDSLEVNRLFRKC*RGFQIELILVVTQV
Trigger: GACTTGGGTTACTACCAATATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCTGTTCACTTCCAGACTGTCCTTGGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp CAATGTTACAGTATTGTCACCTCTGACTTGAGGCTCCTAAAGAAGTaGTTAGACTTAGCATGCCACACTCACTGGGGGCCCAGTGTGGAA +
Preference number: 1 (lower is better)
Translates to: QCYSIVTSDLRLLKK*LDLACHTHWGPSVE
Trigger: TTCCACACTGGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTGTAACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp TGCTCTCTCTGCCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACTTaGCTACCCCCATTCTCACTTCTTTCACTCTCACTTTGTTCTCAC +
Preference number: 1 (lower is better)
Translates to: CSLCLERALHSRFFT*LPPFSLLSLSLCSH
Trigger: GTGAGAACAAAGTGAGAGTGAAAGAAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCAGAGAGAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp CAAGGACAGTCTGGAAGTGAACAGGCTTTTCCGGAAGTGCTGGCGTaGCTTTCAGATAGAGCTCATATTGGTAGTAACCCAAGTCAGTGT +
Preference number: 1 (lower is better)
Translates to: QGQSGSEQAFPEVLA*LSDRAHIGSNPSQC
Trigger: ACACTGACTTGGGTTACTACCAATATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCTGTTCACTTCCAGACTGTCCTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 90 bp GGTCTTTGGAGGTTTGAATCCCCTGGTGCTAACCAATATGCACACTaGCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCA +
Preference number: 1 (lower is better)
Translates to: GLWRFESPGANQYAH*LPGIQGILGNNKQP
Trigger: TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATATTGGTTAGCACCAGGGGATTCAAACCTCCAAAGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CCA 90 bp CAGTATATGGAGTGTTCAGTACTATCTGTGGTTTCAGGCATCTACTaGGCACCTTGGAATGTATCCCCTGAGGATGAGGGAGGACTATTG +
Preference number: 1 (lower is better)
Translates to: QYMECSVLSVVSGIY*APWNVSPEDEGGLL
Trigger: CAATAGTCCTCCCTCATCCTCAGGGGATACATTCCAAGGTGCCCAGTAGATGCCTGAAACCACAGATAGTACTGAACACTCCATATACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 90 bp TTGTGCAAAGTTAGTCTTCCGAAGGTTTCTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTGCCCTGTAGTCCTAGCTACTCAGGA +
Preference number: 1 (lower is better)
Translates to: LCKVSLPKVSPAFRG*NSNENVPCSPSYSG
Trigger: TCCTGAGTAGCTAGGACTACAGGGCACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGGAGAAACCTTCGGAAGACTAACTTTGCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 90 bp ATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTaGCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACTTGGCTACCC +
Preference number: 1 (lower is better)
Translates to: IEHFCPCMCCTCCSL*LERALHSRFFTWLP
Trigger: GGGTAGCCAAGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCAGAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp CAGGTGGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTaGAGGCAATGGATTAGATATACACATAGCAACATGAATGGATCT +
Preference number: 1 (lower is better)
Translates to: QVECGVTQCGLVCRR*RQWIRYTHSNMNGS
Trigger: AGATCCATTCATGTTGCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR TCA 90 bp TTGAAATGTAGCAGGCCCTCACCAATGTTACAGTATTGTCACCTCTaGCTTGAGGCTCCTAAAGAAGTGGTTAGACTTAGCATGCCACAC +
Preference number: 1 (lower is better)
Translates to: LKCSRPSPMLQYCHL*LEAPKEVVRLSMPH
Trigger: GTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTGTAACATTGGTGAGGGCCTGCTACATTTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp TGTAAAGGAAAATACCACAGTATATGGAGTGTTCAGTACTATCTGTaGTTTCAGGCATCTACTGGGCACCTTGGAATGTATCCCCTGAGG +
Preference number: 1 (lower is better)
Translates to: CKGKYHSIWSVQYYL*FQASTGHLGMYPLR
Trigger: CCTCAGGGGATACATTCCAAGGTGCCCAGTAGATGCCTGAAACCACAGATAGTACTGAACACTCCATATACTGTGGTATTTTCCTTTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 90 bp GCATTCTTTGGTGAATCAGCTTCTCGTGAGGTCCTTCAGATCAGCTaGTGTCAGTTGTTTCACTGGTACACAGGACCAAGAATAAATATC +
Preference number: 1 (lower is better)
Translates to: AFFGESASREVLQIS*CQLFHWYTGPRINI
Trigger: GATATTTATTCTTGGTCCTGTGTACCAGTGAAACAACTGACATCAGCTGATCTGAAGGACCTCACGAGAAGCTGATTCACCAAAGAATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp CCATTCTCACTTCTTTCACTCTCACTTTGTTCTCACTTCTTTACTTaGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGGGAACTACC +
Preference number: 1 (lower is better)
Translates to: PFSLLSLSLCSHFFT*LPPICPLKFSWGTT
Trigger: GGTAGTTCCCCAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAAAGTGAGAGTGAAAGAAGTGAGAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTaGTCTCTCTGCCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACT +
Preference number: 1 (lower is better)
Translates to: INHIEHFCPCMCCTC*SLCLERALHSRFFT
Trigger: AGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCAGAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 90 bp TTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAATTGTAGCTaGAGTTTCAGGGCAACAGGGTTTAAGGTATTAGGTAGAGGTCTT +
Preference number: 1 (lower is better)
Translates to: LNCAKQFLQQQCNCS*SFRATGFKVLGRGL
Trigger: AAGACCTCTACCTAATACCTTAAACCCTGTTGCCCTGAAACTCCAGCTACAATTACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp AATTTGAACTGGAAGAGAGACTCTCCTGTAAGGAGTTTAGTCATATaGCCACAAAGGAATGAATTTTGCCAACACATTGAGGGTCCTTGG +
Preference number: 1 (lower is better)
Translates to: NLNWKRDSPVRSLVI*PQRNEFCQHIEGPW
Trigger: CCAAGGACCCTCAATGTGTTGGCAAAATTCATTCCTTTGTGGCCATATGACTAAACTCCTTACAGGAGAGTCTCTCTTCCAGTTCAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp GATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTaGGTTTGGCAAATGTCAAGTTTTGCCAGGTACCTTAAAGTAGCA +
Preference number: 1 (lower is better)
Translates to: DLVRLLRTVMKELWL*VWQMSSFARYLKVA
Trigger: TGCTACTTTAAGGTACCTGGCAAAACTTGACATTTGCCAAACCCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp ATAAAATGCTTTGTGTGGACTGAGGATGAAGATGATAGTGCTCCATaGACTGAGGAGTATGAGAAATGCAATCCCTGTACCAGAAAACAA +
Preference number: 1 (lower is better)
Translates to: IKCFVWTEDEDDSAP*TEEYEKCNPCTRKQ
Trigger: TTGTTTTCTGGTACAGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCTCAGTCCACACAAAGCATTTTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATaGCTGTGGGTTTGGCAAATGTCAAGTTTTGCCAGGTACCTTAAA +
Preference number: 1 (lower is better)
Translates to: YADLVRLLRTVMKEL*LWVWQMSSFARYLK
Trigger: TTTAAGGTACCTGGCAAAACTTGACATTTGCCAAACCCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 90 bp GTGCCTGACTGCATACTAGTCATTATTTCACAGTTACAATTCATCTaGATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGT +
Preference number: 1 (lower is better)
Translates to: VPDCILVIISQLQFI*ICVMLGCYARTCNS
Trigger: ACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCAGATGAATTGTAACTGTGAAATAATGACTAGTATGCAGTCAGGCAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 90 bp ACCGAATCAAGTGAGTACTTAAAAGAGATTAGAAGAAATTTGAACTaGAAGAGAGACTCTCCTGTAAGGAGTTTAGTCATATGGCCACAA +
Preference number: 1 (lower is better)
Translates to: TESSEYLKEIRRNLN*KRDSPVRSLVIWPQ
Trigger: TTGTGGCCATATGACTAAACTCCTTACAGGAGAGTCTCTCTTCCAGTTCAAATTTCTTCTAATCTCTTTTAAGTACTCACTTGATTCGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAACTGGGGGCCCAGTGTaGAACGAGGCCAGGGAGCCC +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMETGGPV*NEAREP
Trigger: GGGCTCCCTGGCCTCGTTCCACACTGGGCCCCCAGT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp TCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGAGCTaGGCTCTTGGTCCCAGGGAGAAGGAACTTCCTCCTCTCTCAGGG +
Preference number: 2 (lower is better)
Translates to: SNQPGRGFTLGQDLS*ALGPREKELPPLSG
Trigger: CCCTGAGAGAGGAGGAAGTTCCTTCTCCCTGGGACCAAGAGCCAAGCTCAGATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTGGGGGAAGAAGAGGGTaGCCTGGTGCTTGCGGTTCT +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCGGRRG*PGACGS
Trigger: AGAACCGCAAGCACCAGGGCACCCTCTTCTTCCCCC...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGGTCCTAGAGTATACTaGGCTAGGGTTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKGPRVY*ARVVGR
Trigger: CCTCCCCACAACCCTAGCCCAGTATACTCTAGGACC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCTTGTAGGAGGGCTGTaGGGGATGAGTGTGGGGAGC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLVGGL*GMSVGS
Trigger: GCTCCCCACACTCATCCCCCACAGCCCTCCTACAAG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGCACTGGAACAGGTCTaGAGTTGGGGGAGTTGCCCC +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEALEQV*SWGSCP
Trigger: GGGGCAACTCCCCCAACTTCAGACCTGTTCCAGTGC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGGCACCAAACAGCTATaGGGAAGCAGGTCTGAGCGC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWGTKQL*GSRSER
Trigger: GCGCTCAGACCTGCTTCCTCATAGCTGTTTGGTGCC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACACTGGGGCAGGATCTaGGCTTGGCTCTTGGTCCCA +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEHWGRI*AWLLVP
Trigger: TGGGACCAAGAGCCAAGCTCAGATCCTGCCCCAGTG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCTTGAGGAAATCTCATaGCATCCCACTCCATCCTGC +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKLEEIS*HPTPSC
Trigger: GCAGGATGGAGTGGGATGGCATGAGATTTCCTCAAG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTAAGAGGGTGCCCTGGTaGTTGCGGTTCTCCAAGTTC +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCKRVPW*LRFSKF
Trigger: GAACTTGGAGAACCGCAAGCACCAGGGCACCCTCTT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTGGCCCCAAAGCACATaGGTAGTGATGCTGGCATAT +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKWPQST*VVMLAY
Trigger: ATATGCCAGCATCACTACCCATGTGCTTTGGGGCCA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTCAACAAGTCTAGGGTaGGGCCTGAGGGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRISTSLG*GLRACL
Trigger: AAGGCAGGCCCTCAGGCCCCACCCTAGACTTGTTGA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp ATGATTATGCTGTACCCGGCTCGGATCGAGAAGGGACCTTGGGGCTaGGGAGGCAGAGCCATTCCAAAGAGGGGGATGATATACTCTCCA +
Preference number: 2 (lower is better)
Translates to: MIMLYPARIEKGPWG*GGRAIPKRGMIYSP
Trigger: TGGAGAGTATATCATCCCCCTCTTTGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGATCCGAGCCGGGTACAGCATAATCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGATGTGCAGATGGGTTaGGAATCCCTGCTCTCCTGC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWDVQMG*ESLLSC
Trigger: GCAGGAGAGCAGGGATTCTCAACCCATCTGCACATC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGGGGATCCTGGAGGGTaGAGGGCTGAAAAACCAGGT +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEGDPGG*RAEKPG
Trigger: ACCTGGTTTTTCAGCCCTTCACCCTCCAGGATCCCC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGCTCTCCTGCTGAATaGTATCCAAGGCGGGGTGTG +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRICSPAE*YPRRGV
Trigger: CACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGGTCCTAGAGTATACTaGGCTAGGGTTGTGGGGAGG +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWGPRVY*ARVVGR
Trigger: CCTCCCCACAACCCTAGCCCAGTATACTCTAGGACC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGGCTTGGGGAAGCACTaGAACAGGTCTGAAGTTGGG +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIGLGKH*NRSEVG
Trigger: CCCAACTTCAGACCTGTTCCAGTGCTTCCCCAAGCC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTGGCAGGTTGGGAATCTaGCAGAAAAGGTTGCTCTCG +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCGRLGI*QKRLLS
Trigger: CGAGAGCAACCTTTTCTGCCAGATTCCCAACCTGCC...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTCCGGAAGTGCTGGCGTaGCTTTCAGATAGAGCTCAT +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCPEVLA*LSDRAH
Trigger: ATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGG...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp ATGATATACTCTCCACCTGCGAGCGATGATAGGATCAGGATGCCCTaGGTCTCACCCAGGTGGCTGGGCTCGAATAAGACTTCCACACTG +
Preference number: 2 (lower is better)
Translates to: MIYSPPASDDRIRMP*VSPRWLGSNKTSTL
Trigger: CAGTGTGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCCTATCATCGCTCGCAGGTGGAGAGTATATCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp GGGGTTTTGCTGCCAGATGGGTTTCCTTCAAAGGAGACTGTGATGTaGTTGATCTTCTTGGGCCGCACAGACTCTCCAGCGCGAATGGTG +
Preference number: 2 (lower is better)
Translates to: GVLLPDGFPSKETVM*LIFLGRTDSPARMV
Trigger: CACCATTCGCGCTGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACATCACAGTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp TCACCAGGAGGGCAGCTCACAGTCAGCTTGGTGGTGATGGGGGTTTaGCTGCCAGATGGGTTTCCTTCAAAGGAGACTGTGATGTTGTTG +
Preference number: 2 (lower is better)
Translates to: SPGGQLTVSLVVMGV*LPDGFPSKETVMLL
Trigger: CAACAACATCACAGTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACCCCCATCACCACCAAGCTGACTGTGAGCTGCCCTCCTGGTGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAGAAGGTCACTAGTGTaGTACCTGTGCCTTCTTGAT +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKRRSLV*YLCLLD
Trigger: ATCAAGAAGGCACAGGTATCACACTAGTGACCTTCT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAAGAGTCTCCCTCCATaGAAGCCACCTCTGACAGGT +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWKSLPP*KPPLTG
Trigger: ACCTGTCAGAGGTGGCTTTCATGGAGGGAGACTCTT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGCTGGCTATAAGCCATaGTGGGGCTGGTGGCATGTT +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEAGYKP*WGWWHV
Trigger: AACATGCCACCAGCCCCAGCATGGCTTATAGCCAGC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGGCTATAAGCCATGCTaGGGCTGGTGGCATGTTAGA +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIGYKPC*GWWHVR
Trigger: TCTAACATGCCACCAGCCCCAGCATGGCTTATAGCC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTCCTCTAAAGTTCAGCTaGGGAACTACCTTGTCCAGG +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCPLKFS*GTTLSR
Trigger: CCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGG...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTATCAATTGGGAACCTaGACAGTGGTGGGATCCAGC +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCYQLGT*TVVGSS
Trigger: GCTGGATCCCACCACTGTCCAGGTTCCCAATTGATA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp CCAGATGGGTTTCCTTCAAAGGAGACTGTGATGTTGTTGATCTTCTaGGGCCGCACAGACTCTCCAGCGCGAATGGTGAAGGCTGGGTTA +
Preference number: 2 (lower is better)
Translates to: PDGFPSKETVMLLIF*GRTDSPARMVKAGL
Trigger: TAACCCAGCCTTCACCATTCGCGCTGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACATCACAGTCTCCTTTGAAGGAAACCCATCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGAGTTAGGTGGTCCTaGTGTGCAGATGGGTTGAGA +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIRVRWS*CADGLR
Trigger: TCTCAACCCATCTGCACATCAGGACCACCTAACTCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCATCCCACTCCATCCTaGTCAGGATGTGAATCATCC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWHPTPS*SGCESS
Trigger: GGATGATTCACATCCTGAGCAGGATGGAGTGGGATG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCTTGAGGAAATCTCATaGCATCCCACTCCATCCTGC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLEEIS*HPTPSC
Trigger: GCAGGATGGAGTGGGATGGCATGAGATTTCCTCAAG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGCAGTAACAGACCAATaGACAGAGACAGTGGGGATG +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIAVTDQ*TETVGM
Trigger: CATCCCCACTGTCTCTGTGCATTGGTCTGTTACTGC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTGTCCCATTTAAACCTTaGACCCACATCGCCTGTGTT +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCVPFKP*THIACV
Trigger: AACACAGGCGATGTGGGTGCAAGGTTTAAATGGGAC...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTGTGTAGGGCAGATGTaGGATTCGGACACTGATGGT +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWCVGQM*DSDTDG
Trigger: ACCATCAGTGTCCGAATCCCACATCTGCCCTACACA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCCTCTGGTGAATAGGTaGAAGGAGGCACATTTTGGG +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWPLVNR*KEAHFG
Trigger: CCCAAAATGTGCCTCCTTCCACCTATTCACCAGAGG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGTCTTAGGGATCACTTaGTGTACCACATTGACCATT +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKVLGIT*CTTLTI
Trigger: AATGGTCAATGTGGTACACCAAGTGATCCCTAAGAC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAAGCCATGCTGGGGCTaGTGGCATGTTAGACAAGAT +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIKPCWG*WHVRQD
Trigger: ATCTTGTCTAACATGCCACCAGCCCCAGCATGGCTT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp GTTTTGCTGCCAGATGGGTTTCCTTCAAAGGAGACTGTGATGTTGTaGATCTTCTTGGGCCGCACAGACTCTCCAGCGCGAATGGTGAAG +
Preference number: 2 (lower is better)
Translates to: VLLPDGFPSKETVML*IFLGRTDSPARMVK
Trigger: CTTCACCATTCGCGCTGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACATCACAGTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGTATTCTGTGCACAGTaGTCCTTGGAGTTCTGCCAC +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEVFCAQ*SLEFCH
Trigger: GTGGCAGAACTCCAAGGAGCACTGTGCACAGAATAC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACAAGGCCCAGACCAATaGCTACCTTTAGGTCAGAAG +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEQGPDQ*LPLGQK
Trigger: CTTCTGACCTAAAGGTAGGCATTGGTCTGGGCCTTG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTATGTGTTGCACATGTTaGTCTCTCTGCCTAGAGAGA +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCMCCTC*SLCLER
Trigger: TCTCTCTAGGCAGAGAGAGCAACATGTGCAACACAT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGACAATGCATAGCTTTTaGTTGATACAGGTAACCCTG +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKTMHSF*LIQVTL
Trigger: CAGGGTTACCTGTATCAACCAAAAGCTATGCATTGT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAAAGAGTTATGGCTGTaGGTTTGGCAAATGTCAAGT +
Preference number: 2 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKKELWL*VWQMSS
Trigger: ACTTGACATTTGCCAAACCCACAGCCATAACTCTTT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGAGTGTGCTGCAACCTaGGTTCGTTTTTGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIECAAT*VRFCFS
Trigger: GGAGAAACAAAAACGAACCCAGGTTGCAGCACACTC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp GGGATCCTGGAGGGTGAAGGGCTGAAAAACCAGGTGACTGATTGGTaGGGTAAGACGGATGAAATCATCAGGATGTGGAAACCGCATTCT +
Preference number: 2 (lower is better)
Translates to: GILEGEGLKNQVTDW*GKTDEIIRMWKPHS
Trigger: AGAATGCGGTTTCCACATCCTGATGATTTCATCCGTCTTACCCAACCAATCAGTCACCTGGTTTTTCAGCCCTTCACCCTCCAGGATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGAAGGTCACTAGTGTaGTACCTGTGCCTTCTTGAT +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIRRSLV*YLCLLD
Trigger: ATCAAGAAGGCACAGGTATCACACTAGTGACCTTCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGTGGGATTCGGACACTaGTGGTATAAAAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEVGFGH*WYKSQE
Trigger: CTCTTGGCTTTTATACCATCAGTGTCCGAATCCCAC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATGGGTTGAGAATCCCTaGTCTCCTGCTGAATGCTAT +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEWVENP*SPAECY
Trigger: ATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCCA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATCAGAGGTGTATGTCTaGAGAAGCAAACCCATGCCA +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESEVYV*RSKPMP
Trigger: TGGCATGGGTTTGCTTCTGCAGACATACACCTCTGA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp TTCTGTCCTCTGCCGTGTGTAATTGATGAACTTCACAAGGATGATTaGGCTGCTGCCAAGGACAGTCTGGAAGTGAACAGGCTTTTCCGG +
Preference number: 2 (lower is better)
Translates to: FCPLPCVIDELHKDD*AAAKDSLEVNRLFR
Trigger: CCGGAAAAGCCTGTTCACTTCCAGACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAAGTTCATCAATTACACACGGCAGAGGACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGCAAGTCATCACTCTTaGTCATTGATCTTAGCATCC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWASHHS*SLILAS
Trigger: GGATGCTAAGATCAATGAGCAAGAGTGATGACTTGC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATTTCTCCAATGTGTGTaGATTTCCACGGGACGCATA +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEFLQCV*ISTGRI
Trigger: TATGCGTCCCGTGGAAATGCACACACATTGGAGAAA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGACAATGCATAGCTTTTaGTTGATACAGGTAACCCTG +
Preference number: 2 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMTMHSF*LIQVTL
Trigger: CAGGGTTACCTGTATCAACCAAAAGCTATGCATTGT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGAAGGAGGCACATTTTaGGGAGGGTTAATTTCATCA +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWEGGTF*GGLISS
Trigger: TGATGAAATTAACCCTCCCCAAAATGTGCCTCCTTC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGAAGGAGGCACATTTTaGGGAGGGTTAATTTCATCA +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIEGGTF*GGLISS
Trigger: TGATGAAATTAACCCTCCCCAAAATGTGCCTCCTTC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGTCTTAGGGATCACTTaGTGTACCACATTGACCATT +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIVLGIT*CTTLTI
Trigger: AATGGTCAATGTGGTACACCAAGTGATCCCTAAGAC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGAAATCATCAGGATGTaGAAACCGCATTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWEIIRM*KPHSLV
Trigger: CACCAAAGAATGCGGTTTCCACATCCTGATGATTTC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAGGCTCCTAAAGAAGTaGTTAGACTTAGCATGCCAC +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMERLLKK*LDLACH
Trigger: GTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATAACAGGAGTGGGGTGTaGGGATGTAAGAGAATAAAT +
Preference number: 2 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDNRSGV*GCKRIN
Trigger: ATTTATTCTCTTACATCCCCACACCCCACTCCTGTT...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 90 bp GAAGAGTCTCCCTCCATGAAAGCCACCTCTGACAGGTATAAGGACTaGCTAAAAGATTGCCGGGCCACACCTACAGACTTTTTGATTCAG +
Preference number: 2 (lower is better)
Translates to: EESPSMKATSDRYKD*LKDCRATPTDFLIQ
Trigger: CTGAATCAAAAAGTCTGTAGGTGTGGCCCGGCAATCTTTTAGCAAGTCCTTATACCTGTCAGAGGTGGCTTTCATGGAGGGAGACTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp TTGCTCTCTCTGCCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACTaGGCTACCCCCATTCTCACTTCTTTCACTCTCACTTTGTTCTCA +
Preference number: 2 (lower is better)
Translates to: LLSLPRESPSFSLLH*ATPILTSFTLTLFS
Trigger: TGAGAACAAAGTGAGAGTGAAAGAAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCAGAGAGAGCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTTATTACAAAGTACTTaGGCTTTGGGGCTATGTCAA +
Preference number: 2 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMLLQST*ALGLCQ
Trigger: TTGACATAGCCCCAAAGCTCAAGTACTTTGTAATAA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp GAAGAGTGCACAGGTGGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGATGGAATACAAAATATaGCTTCTCTCTGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: EECTGGMWGDTMWSGLQKMEYKI*LLSVSP
Trigger: GGGAGAGACAGAGAGAAGTCATATTTTGTATTCCAT...CTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTGTGCACTCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGATTTTAAAAAGAAACTaGAGTACCCAGCGTCACGCA +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWILKRN*STQRHA
Trigger: TGCGTGACGCTGGGTACTGCAGTTTCTTTTTAAAAT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGGTCAGAGCGATCTTTaGTCACTTAACCATTGTGAA +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEGQSDL*SLNHCE
Trigger: TTCACAATGGTTAAGTGAGCAAAGATCGCTCTGACC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTTGACTCTCTTGATCTaGTTTAAATACCCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: ASLASWGCINEFFCVEVCLTLLI*FKYPFA
Trigger: AGCAAAGGGGTATTTAAAGCAGATCAAGAGAGTCAA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCACAATGCATAGCTTTTaGTTGATACAGGTAACCCTG +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRITMHSF*LIQVTL
Trigger: CAGGGTTACCTGTATCAACCAAAAGCTATGCATTGT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAAAGTACTTGAGCTTTaGGGCTATGTCAAGAAACTC +
Preference number: 2 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWKVLEL*GYVKKL
Trigger: GAGTTTCTTGACATAGCCCCAAAGCTCAAGTACTTT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGCATCACCAAGAACTaGTTAGAAATGCAGATTCTC +
Preference number: 2 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRISITKN*LEMQIL
Trigger: GAGAATCTGCATTTCTAACCAGTTCTTGGTGATGCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATTATGGCTGTGGGTTTaGCAAATGTCAAGTTTTGCC +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMELWLWV*QMSSFA
Trigger: GGCAAAACTTGACATTTGCCAAACCCACAGCCATAA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp TTGGGTAAGACGGATGAAATCATCAGGATGTGGAAACCGCATTCTTaGGTGAATCAGCTTCTCGTGAGGTCCTTCAGATCAGCTGATGTC +
Preference number: 2 (lower is better)
Translates to: LGKTDEIIRMWKPHS*VNQLLVRSFRSADV
Trigger: GACATCAGCTGATCTGAAGGACCTCACGAGAAGCTGATTCACCAAAGAATGCGGTTTCCACATCCTGATGATTTCATCCGTCTTACCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp AATGTAGCAGGCCCTCACCAATGTTACAGTATTGTCACCTCTGACTaGAGGCTCCTAAAGAAGTGGTTAGACTTAGCATGCCACACTCAC +
Preference number: 2 (lower is better)
Translates to: NVAGPHQCYSIVTSD*RLLKKWLDLACHTH
Trigger: GTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTGTAACATTGGTGAGGGCCTGCTACATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATCCCTGCTCTCCTGCTaGATGCTATCCAAGGCGGGG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTSLLSC*MLSKAG
Trigger: CCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATGGGGACTGAGAGTTTaGCTTTTAATAAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEWGLRV*LLINSQ
Trigger: CTGGGAATTTATTAAAAGTCAAACTCTCAGTCCCCA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGATAAATGTTGGACCATaGCTGATCTTGATTATGAGT +
Preference number: 2 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMINVGP*LILIMS
Trigger: ACTCATAATCAAGATCAGCCATGGTCCAACATTTAT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp TGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTaGTCCAGGAAGCCTTCCTTGACTCTCTTGATCTGCTTTAAATAC +
Preference number: 2 (lower is better)
Translates to: WLPPICPLKFSWGTT*SRKPSLTLLICFKY
Trigger: GTATTTAAAGCAGATCAAGAGAGTCAAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATAGGAGGTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACTAGATCGGACTTCCTaGGGGTGGGGCTCAGCAATC +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLDRTS*GWGSAI
Trigger: GATTGCTGAGCCCCACCCTCAGGAAGTCCGATCTAG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGGGATCCTGGAGGGTaGAGGGCTGAAAAACCAGGT +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGDPGG*RAEKPG
Trigger: ACCTGGTTTTTCAGCCCTTCACCCTCCAGGATCCCC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGCAGAAGCAAACCCATaGCAGGGCCAGACTTTAACC +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWAEANP*QGQTLT
Trigger: GGTTAAAGTCTGGCCCTGGCATGGGTTTGCTTCTGC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCAGCTGCAATGTGCATaGAAATCGCCTGGAGGTCCA +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWQLQCA*KSPGGP
Trigger: TGGACCTCCAGGCGATTTGCATGCACATTGCAGCTG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACAAAATCTTGAACTGTaGAAAGCAGTTTCTCCAACA +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEQNLEL*KAVSPT
Trigger: TGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATCAACAAGTCTAGGGTaGGGCCTGAGGGCCTGCCTT +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTSTSLG*GLRACL
Trigger: AAGGCAGGCCCTCAGGCCCCACCCTAGACTTGTTGA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGATGTGGATGCCACCCCTaGAAGAGTGCACAGGTGGAA +
Preference number: 2 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRCGCHP*KSAQVE
Trigger: TTCCACCTGTGCACTCTTCCAGGGGTGGCATCCACA...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CCA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGAATTGGCATGAGCCTGTaGATGCCACCCCTGGAAGAG +
Preference number: 2 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRIGMSL*MPPLEE
Trigger: CTCTTCCAGGGGTGGCATCCACAGGCTCATGCCAAT...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAGAGTTAGGTGGTCCTaGTGTGCAGATGGGTTGAGA +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWRVRWS*CADGLR
Trigger: TCTCAACCCATCTGCACATCAGGACCACCTAACTCT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCAGACATACCAAAATATTaGCTGTGGTTTCCCTGGTTG +
Preference number: 2 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPDIPKY*LWFPWL
Trigger: CAACCAGGGAAACCACAGTCAATATTTTGGTATGTC...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGCTGTTAAGCTACTTTaGCATTCCAAATTTGCTAAT +
Preference number: 2 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEAVKLL*HSKFAN
Trigger: ATTAGCAAATTTGGAATGGCAAAGTAGCTTAACAGC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TACAGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTCAATGTGGTCTGGTCTaGAGAAGGTGGAGGCAATGG +
Preference number: 2 (lower is better)
Translates to: YRLRHTKILTVVSLVGRIQCGLV*RRWRQW
Trigger: CCATTGCCTCCACCTTCTGCAGACCAGACCACATTG...AATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCTGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTGTGTAGGGCAGATGTaGGATTCGGACACTGATGGT +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWCVGQM*DSDTDG
Trigger: ACCATCAGTGTCCGAATCCCACATCTGCCCTACACA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGTCCTGATGTGCAGATaGGTTGAGAATCCCTGCTCT +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWVLMCR*VENPCS
Trigger: AGAGCAGGGATTCTCAACCCATCTGCACATCAGGAC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCAAACAGGAGTGGGGTGTaGGGATGTAAGAGAATAAAT +
Preference number: 2 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPNRSGV*GCKRIN
Trigger: ATTTATTCTCTTACATCCCCACACCCCACTCCTGTT...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CCA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGATGGGGTGACACAATGTaGTCTGGTCTGCAGAAGGTG +
Preference number: 2 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRWGDTM*SGLQKV
Trigger: CACCTTCTGCAGACCAGACCACATTGTGTCACCCCA...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 90 bp CCCATTCTCACTTCTTTCACTCTCACTTTGTTCTCACTTCTTTACTaGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGGGAACTAC +
Preference number: 2 (lower is better)
Translates to: PILTSFTLTLFSLLY*VTSYLSSKVQLGNY
Trigger: GTAGTTCCCCAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAAAGTGAGAGTGAAAGAAGTGAGAATGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGCAGAAGCAAACCCATaGCAGGGCCAGACTTTAACC +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCAEANP*QGQTLT
Trigger: GGTTAAAGTCTGGCCCTGGCATGGGTTTGCTTCTGC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTCAGAGGTGTATGTCTaGAGAAGCAAACCCATGCCA +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWSEVYV*RSKPMP
Trigger: TGGCATGGGTTTGCTTCTGCAGACATACACCTCTGA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAACTGGGCTAGGGTTGTaGGGAGGTACAGAAGAAGGA +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTTGLGL*GGTEEG
Trigger: TCCTTCTTCTGTACCTCCCCACAACCCTAGCCCAGT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACTCCCGGAAGAGTTCTaGACTGGGGTTTTTAAGGGG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLPEEF*TGVFKG
Trigger: CCCCTTAAAAACCCCAGTCCAGAACTCTTCCGGGAG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTGCACAGTGCTCCTTaGAGTTCTGCCACACAGCTA +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVHSAP*SSATQL
Trigger: TAGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGGAGCCCCATTCCCATaGTATTCTGTGCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTGAPFP*YSVHSA
Trigger: AGCACTGTGCACAGAATACCATGGGAATGGGGCTCC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TACAGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTTGCACAGGTGGAATGTaGGGTGACACAATGTGGTCT +
Preference number: 2 (lower is better)
Translates to: YRLRHTKILTVVSLVGRICTGGM*GDTMWS
Trigger: AGACCACATTGTGTCACCCCACATTCCACCTGTGCA...AATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATATCCTGCTCAGGATGTaGATCATCCCCTCGTCTAGC +
Preference number: 2 (lower is better)
Translates to: KICHLVVFRPISSVFRGYILLRM*IIPSSS
Trigger: GCTAGACGAGGGGATGATTCACATCCTGAGCAGGAT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGTCATGGGATCGCAATaGTTGTGTTCAAGGAAACCT +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWVMGSQ*LCSRKP
Trigger: AGGTTTCCTTGAACACAAGCATTGCGATCCCATGAC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACATCCCACTCCATCCTaGTCAGGATGTGAATCATCC +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTHPTPS*SGCESS
Trigger: GGATGATTCACATCCTGAGCAGGATGGAGTGGGATG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCCTCTGGTGAATAGGTaGAAGGAGGCACATTTTGGG +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCPLVNR*KEAHFG
Trigger: CCCAAAATGTGCCTCCTTCCACCTATTCACCAGAGG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAAAGCCATGCTGGGGCTaGTGGCATGTTAGACAAGAT +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTKPCWG*WHVRQD
Trigger: ATCTTGTCTAACATGCCACCAGCCCCAGCATGGCTT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAATCTCAAACCAGCCTaGAAGAGGGTTCACACTGGG +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCNLKPA*KRVHTG
Trigger: CCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp ACATTTTGGGGAGGGTTAATTTCATCAACTAGGTCCTATGCAGATTaGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGG +
Preference number: 2 (lower is better)
Translates to: TFWGGLISSTRSYAD*VRLLRTVMKELWLW
Trigger: CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATAGGACCTAGTTGATGAAATTAACCCTCCCCAAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAGCCAAGAGAAAAAGTaGTGGGAGTGTCCCTGGATT +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSQEKK*WECPWI
Trigger: AATCCAGGGACACTCCCATCACTTTTTCTCTTGGCT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTGGGATTCGGACACTaGTGGTATAAAAGCCAAGAG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVGFGH*WYKSQE
Trigger: CTCTTGGCTTTTATACCATCAGTGTCCGAATCCCAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATGATCAAAGGTCACTaGGTGATGAGATGGGAGGAG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTMIKGH*VMRWEE
Trigger: CTCCTCCCATCTCATCACTCAGTGACCTTTGATCAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCCTGGTCTGCTTTGCTaGGAATGGATTCTCCAATGT +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCPGLLC*EWILQC
Trigger: ACATTGGAGAATCCATTCTCAGCAAAGCAGACCAGG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp CTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCAACATGAATATGGAATACAAAATATaGCTTCTCTCTGTCTCTCCC +
Preference number: 2 (lower is better)
Translates to: LVCRRWRQWIRYTHSNMNMEYKI*LLSVSP
Trigger: GGGAGAGACAGAGAGAAGTCATATTTTGTATTCCAT...ATTCATGTTGCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGGAGTGTCCCTGGATTaGCCTAATGTTATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTGVSLD*PNVICS
Trigger: TGAGCAGATAACATTAGGGCAATCCAGGGACACTCC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAGTCCTCCTCATCTATaGCTTCAGTTACCTGTGGTC +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSPPHL*LQLPVV
Trigger: GACCACAGGTAACTGAAGCCATAGATGAGGAGGACT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATCCTCTCAGATTATTaGTCAGAGCGATCTTTGCTC +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWILSDY*SERSLL
Trigger: GAGCAAAGATCGCTCTGACCAATAATCTGAGAGGAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAGTGTGCTGCAACCTaGGTTCGTTTTTGTTTCTCC +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCECAAT*VRFCFS
Trigger: GGAGAAACAAAAACGAACCCAGGTTGCAGCACACTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTCTCGCTTCTTCACTTaGCTACCCCCATTCTCACTT +
Preference number: 2 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLSRFFT*LPPFSL
Trigger: AAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGA...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp GGCCTGACCGAATCAAGTGAGTACTTAAAAGAGATTAGAAGAAATTaGAACTGGAAGAGAGACTCTCCTGTAAGGAGTTTAGTCATATGG +
Preference number: 2 (lower is better)
Translates to: GLTESSEYLKEIRRN*NWKRDSPVRSLVIW
Trigger: CCATATGACTAAACTCCTTACAGGAGAGTCTCTCTTCCAGTTCAAATTTCTTCTAATCTCTTTTAAGTACTCACTTGATTCGGTCAGGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTGGGGACTGAGAGTTTaGCTTTTAATAAATTCCCAG +
Preference number: 2 (lower is better)
Translates to: YADLVRLLRTVMKELWLWWGLRV*LLINSQ
Trigger: CTGGGAATTTATTAAAAGTCAAACTCTCAGTCCCCA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGGAGTGTCCCTGGATTaGCCTAATGTTATCTGCTCA +
Preference number: 2 (lower is better)
Translates to: KICHLVVFRPISSVFRGYGVSLD*PNVICS
Trigger: TGAGCAGATAACATTAGGGCAATCCAGGGACACTCC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGACAATGCATAGCTTTTaGTTGATACAGGTAACCCTG +
Preference number: 2 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLTMHSF*LIQVTL
Trigger: CAGGGTTACCTGTATCAACCAAAAGCTATGCATTGT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTTCAGTACTATCTGTaGTTTCAGGCATCTACTGGG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVQYYL*FQASTG
Trigger: CCCAGTAGATGCCTGAAACCACAGATAGTACTGAAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACAATGTAATTGTAGCTaGAGTTTCAGGGCAACAGGG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTQCNCS*SFRATG
Trigger: CCCTGTTGCCCTGAAACTCCAGCTACAATTACATTG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 90 bp ACTTTATACAGATGCTGTATATTTGCAAGTCATCACTCTTGCTCATaGATCTTAGCATCCTCTCAGATTATTGGTCAGAGCGATCTTTGC +
Preference number: 2 (lower is better)
Translates to: TLYRCCIFASHHSCS*ILASSQIIGQSDLC
Trigger: GCAAAGATCGCTCTGACCAATAATCTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATGACTTGCAAATATACAGCATCTGTATAAAGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGTCAGAGCGATCTTTaGTCACTTAACCATTGTGAA +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGQSDL*SLNHCE
Trigger: TTCACAATGGTTAAGTGAGCAAAGATCGCTCTGACC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAAATCATCAGGATGTaGAAACCGCATTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCEIIRM*KPHSLV
Trigger: CACCAAAGAATGCGGTTTCCACATCCTGATGATTTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGAAGAAGGTGGAGGCAATaGATTAGATATACACATAGC +
Preference number: 2 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRRRWRQ*IRYTHS
Trigger: GCTATGTGTATATCTAATCCATTGCCTCCACCTTCT...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAAAGAGTTATGGCTGTaGGTTTGGCAAATGTCAAGT +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCKELWL*VWQMSS
Trigger: ACTTGACATTTGCCAAACCCACAGCCATAACTCTTT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTCTCACTTCTTTACTTaGTTACCTCCTATCTGTCCT +
Preference number: 2 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLSHFFT*LPPICP
Trigger: AGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGA...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 90 bp GTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAGAAATAAATaGTCTATTGAGTATGGCAGTCCTCCTCATCTATGGCTTCAGTTA +
Preference number: 2 (lower is better)
Translates to: VFRPISSVFRGYRNK*SIEYGSPPHLWLQL
Trigger: TAACTGAAGCCATAGATGAGGAGGACTGCCATACTCAATAGACAATTTATTTCTATAACCTCTAAAGACACTACTGATAGGTCTAAAGAC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTTATTACAAAGTACTTaGGCTTTGGGGCTATGTCAA +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCLLQST*ALGLCQ
Trigger: TTGACATAGCCCCAAAGCTCAAGTACTTTGTAATAA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACTTGGTGTACCACATTaGCCATTATTGAAAAAGTAC +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLGVPH*PLLKKY
Trigger: GTACTTTTTCAATAATGGTCAATGTGGTACACCAAG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATATTTTAAAAAGAAACTaGAGTACCCAGCGTCACGCA +
Preference number: 2 (lower is better)
Translates to: KICHLVVFRPISSVFRGYILKRN*STQRHA
Trigger: TGCGTGACGCTGGGTACTGCAGTTTCTTTTTAAAAT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATCCACAAGCATGTGTTaGAAGGGTTATTTTCATCAA +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTSTSMC*KGYFHQ
Trigger: TTGATGAAAATAACCCTTCCAACACATGCTTGTGGA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGCTGTTAAGCTACTTTaGCATTCCAAATTTGCTAAT +
Preference number: 2 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCAVKLL*HSKFAN
Trigger: ATTAGCAAATTTGGAATGGCAAAGTAGCTTAACAGC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATTTATAAAATGTATATaGACAGCTTCAGTGGCTTGG +
Preference number: 2 (lower is better)
Translates to: CICVMLGCYARTCNSSVTFIKCI*TASVAW
Trigger: CCAAGCCACTGAAGCTGTCCATATACATTTTATAAA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp ATTATGCTGTACCCGGCTCGGATCGAGAAGGGACCTTaGGGCTTGGGAGGCAGAGCCATTCCAAAGAGGGGG +
Preference number: 3 (lower is better)
Translates to: IMLYPARIEKGP*GLGGRAIPKRG
Trigger: CCCCCTCTTTGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGATCCGAGCCGGGTACAGCATAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR TCA 72 bp ACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTaGGCTTGGCTCTTGGTCCCAGGGAGAAGGAACTTC +
Preference number: 3 (lower is better)
Translates to: TSLEEGSHWGRI*AWLLVPGRRNF
Trigger: GAAGTTCCTTCTCCCTGGGACCAAGAGCCAAGCTCAGATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp AGGGTTCACACTGGGGCAGGATCTGAGCTTGGCTCTTaGTCCCAGGGAGAAGGAACTTCCTCCTCTCTCAGG +
Preference number: 3 (lower is better)
Translates to: RVHTGAGSELGS*SQGEGTSSSLR
Trigger: CCTGAGAGAGGAGGAAGTTCCTTCTCCCTGGGACCAAGAGCCAAGCTCAGATCCTGCCCCAGTGTGAACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp CTAAAGAAGTGGTTAGACTTAGCATGCCACACTCACTaGGGGCCCAGTGTGGAACGAGGCCAGGGAGCCCCA +
Preference number: 3 (lower is better)
Translates to: LKKWLDLACHTH*GPSVERGQGAP
Trigger: TGGGGCTCCCTGGCCTCGTTCCACACTGGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp GGGCCGCACAGACTCTCCAGCGCGAATGGTGAAGGCTaGGTTATCCACGATGATGGAGAAGGTCACCATGTG +
Preference number: 3 (lower is better)
Translates to: GPHRLSSANGEG*VIHDDGEGHHV
Trigger: CACATGGTGACCTTCTCCATCATCGTGGATAACCCAGCCTTCACCATTCGCGCTGGAGAGTCTGTGCGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGGCCAGGGTAAGGACCTaGGGTTCCTGGAGTTCTGGA +
Preference number: 3 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMARVRT*GSWSSG
Trigger: TCCAGAACTCCAGGAACCCAAGGTCCTTACCCTGGC...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 72 bp GCCCCTAGCCACCCCAAGGCTGGCTATAAGCCATGCTaGGGCTGGTGGCATGTTAGACAAGATTTCAGACAG +
Preference number: 3 (lower is better)
Translates to: APSHPKAGYKPC*GWWHVRQDFRQ
Trigger: CTGTCTGAAATCTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGCTAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp CTCCACCTGCGAGCGATGATAGGATCAGGATGCCCTTaGTCTCACCCAGGTGGCTGGGCTCGAATAAGACTT +
Preference number: 3 (lower is better)
Translates to: LHLRAMIGSGCP*SHPGGWARIRL
Trigger: AAGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCCTATCATCGCTCGCAGGTGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 72 bp TGGATGCCACCCCTGGAAGAGTGCACAGGTGGAATGTaGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTG +
Preference number: 3 (lower is better)
Translates to: WMPPLEECTGGM*GDTMWSGLQKV
Trigger: CACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTGTGCACTCTTCCAGGGGTGGCATCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CAA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTAGCTGGGGAACTACCTaGTCCAGGAAGCCTTCCTTG +
Preference number: 3 (lower is better)
Translates to: ASLASWGCINEFFCVEVCSWGTT*SRKPSL
Trigger: CAAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTCTCCAGGTGGCAGGTaGGGAATCTGGCAGAAAAGG +
Preference number: 3 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMSPGGR*GIWQKR
Trigger: CCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAGA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR TCA 72 bp GGACTGGGCACGTTCAGAGTGAGAGTTAGGTGGTCCTaGTGTGCAGATGGGTTGAGAATCCCTGCTCTCCTG +
Preference number: 3 (lower is better)
Translates to: GLGTFRVRVRWS*CADGLRIPALL
Trigger: CAGGAGAGCAGGGATTCTCAACCCATCTGCACATCAGGACCACCTAACTCTCACTCTGAACGTGCCCAGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp GCTGGCCAGCACCTTGATTTCAGCCTTGTGGAACCCTaGGCTGAGAATCCAGTTCACACTGGGCTCTCAACC +
Preference number: 3 (lower is better)
Translates to: AGQHLDFSLVEP*AENPVHTGLST
Trigger: GGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp GGGGCTTGGGAGGCAGAGCCATTCCAAAGAGGGGGATaGTATACTCTCCACCTGCGAGCGATGATAGGATCA +
Preference number: 3 (lower is better)
Translates to: GAWEAEPFQRGG*YTLHLRAMIGS
Trigger: TGATCCTATCATCGCTCGCAGGTGGAGAGTATATCATCCCCCTCTTTGGAATGGCTCTGCCTCCCAAGCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 72 bp CATTCATTCCCAAGAGGCCATCTTCTTCCAGTCTCCTaGCCCTCTTGTAGGAGGGCTGTGGGGGATGAGTGT +
Preference number: 3 (lower is better)
Translates to: HSFPRGHLLPVS*PSCRRAVGDEC
Trigger: ACACTCATCCCCCACAGCCCTCCTACAAGAGGGGCAGGAGACTGGAAGAAGATGGCCTCTTGGGAATGAATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp GACTTGAGGCTCCTAAAGAAGTGGTTAGACTTAGCATaGCACACTCACTGGGGGCCCAGTGTGGAACGAGGC +
Preference number: 3 (lower is better)
Translates to: DLRLLKKWLDLA*HTHWGPSVERG
Trigger: GCCTCGTTCCACACTGGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TATACTCTCCACCTGCGAGCGATGATAGGATCAGGATaGCCTTGGTCTCACCCAGGTGGCTGGGCTCGAATA +
Preference number: 3 (lower is better)
Translates to: YTLHLRAMIGSG*PWSHPGGWARI
Trigger: TATTCGAGCCCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCCTATCATCGCTCGCAGGTGGAGAGTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 72 bp GCTGAATGCTATCCAAGGCGGGGTGTGTATGTGTGGTaGGGGGAGCTGGGATCTCTATTAGCCTTTCTCCAG +
Preference number: 3 (lower is better)
Translates to: AECYPRRGVYVW*GELGSLLAFLQ
Trigger: CTGGAGAAAGGCTAATAGAGATCCCAGCTCCCCCCACCACACATACACACCCCGCCTTGGATAGCATTCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp GATGCCCACACCCCTCTCCAGACCAATTACATCAGATaGGGACTGGGCACGTTCAGAGTGAGAGTTAGGTGG +
Preference number: 3 (lower is better)
Translates to: DAHTPLQTNYIR*GLGTFRVRVRW
Trigger: CCACCTAACTCTCACTCTGAACGTGCCCAGTCCCCATCTGATGTAATTGGTCTGGAGAGGGGTGTGGGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp AGGATGCAGCTGGCCAGCACCTTGATTTCAGCCTTGTaGAACCCTGAGCTGAGAATCCAGTTCACACTGGGC +
Preference number: 3 (lower is better)
Translates to: RMQLASTLISAL*NPELRIQFTLG
Trigger: GCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGCTGCATCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp ATAGGATCAGGATGCCCTTGGTCTCACCCAGGTGGCTaGGCTCGAATAAGACTTCCACACTGGCTTCAGTGC +
Preference number: 3 (lower is better)
Translates to: IGSGCPWSHPGG*ARIRLPHWLQC
Trigger: GCACTGAAGCCAGTGTGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCCTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCATCCTCTCAGATTATaGGTCAGAGCGATCTTTGCT +
Preference number: 3 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKHPLRL*VRAIFA
Trigger: AGCAAAGATCGCTCTGACCAATAATCTGAGAGGATG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAGTCTTAGGGATCACTaGGTGTACCACATTGACCAT +
Preference number: 3 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKSLRDH*VYHIDH
Trigger: ATGGTCAATGTGGTACACCAAGTGATCCCTAAGACT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp GAGGCTCGAGGCTTTAGAGTCGTGGTTCTCACAGTCTaGTTGGTCTCACCAACGAGCATCACCAAGAACTGG +
Preference number: 3 (lower is better)
Translates to: EARGFRVVVLTV*LVSPTSITKNW
Trigger: CCAGTTCTTGGTGATGCTCGTTGGTGAGACCAATCAGACTGTGAGAACCACGACTCTAAAGCCTCGAGCCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTaGGTGGAAGTCTGTACAGTCGGTCCTGCAGTAGTA +
Preference number: 3 (lower is better)
Translates to: SLASWGCINEFF*VEVCTVGPAVV
Trigger: TACTACTGCAGGACCGACTGTACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 72 bp CTCCGAATAACCAGGAGGCTCGAGGCTTTAGAGTCGTaGTTCTCACAGTCTGATTGGTCTCACCAACGAGCA +
Preference number: 3 (lower is better)
Translates to: LRITRRLEALES*FSQSDWSHQRA
Trigger: TGCTCGTTGGTGAGACCAATCAGACTGTGAGAACCACGACTCTAAAGCCTCGAGCCTCCTGGTTATTCGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTATACTGGGCTAGGGTaGTGGGGAGGTACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIYTGLG*WGGTEE
Trigger: TTCTTCTGTACCTCCCCACAACCCTAGCCCAGTATA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTCCAGGAAGCCTTCCTaGACTCTCTTGATCTGCTTT +
Preference number: 3 (lower is better)
Translates to: ASLASWGCINEFFCVEVCSRKPS*TLLICF
Trigger: AAAGCAGATCAAGAGAGTCAAGGAAGGCTTCCTGGA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAACCTGGGTTCGTTTTaGTTTCTCCCCCTCCCTTCT +
Preference number: 3 (lower is better)
Translates to: LWNPELRIQFTLGSQPMENLGSF*FLPLPS
Trigger: AGAAGGGAGGGGGAGAAACAAAAACGAACCCAGGTT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCCTTCCTTGACTCTCTaGATCTGCTTTAAATACCCC +
Preference number: 3 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMPSLTL*ICFKYP
Trigger: GGGGTATTTAAAGCAGATCAAGAGAGTCAAGGAAGG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 72 bp CCCATGGTATTCTGTGCACAGTGCTCCTTGGAGTTCTaGCACACAGCTACCCTGACATTTTCTGAACATCCC +
Preference number: 3 (lower is better)
Translates to: PMVFCAQCSLEF*HTATLTFSEHP
Trigger: GGGATGTTCAGAAAATGTCAGGGTAGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCACAGAATACCATGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp AGTATTGTCACCTCTGACTTGAGGCTCCTAAAGAAGTaGTTAGACTTAGCATGCCACACTCACTGGGGGCCC +
Preference number: 3 (lower is better)
Translates to: SIVTSDLRLLKK*LDLACHTHWGP
Trigger: GGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAAATCTGTCATCTGGTaGTCTTTAGACCTATCAGTA +
Preference number: 3 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKKSVIW*SLDLSV
Trigger: TACTGATAGGTCTAAAGACAACCAGATGACAGATTT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCATCCTCTCAGATTATaGGTCAGAGCGATCTTTGCT +
Preference number: 3 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIHPLRL*VRAIFA
Trigger: AGCAAAGATCGCTCTGACCAATAATCTGAGAGGATG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCATCACTCTTGCTCATaGATCTTAGCATCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIHHSCS*ILASSQ
Trigger: CTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGTTATGGCTGTGGGTTaGGCAAATGTCAAGTTTTGC +
Preference number: 3 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWVMAVG*ANVKFC
Trigger: GCAAAACTTGACATTTGCCAAACCCACAGCCATAAC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGTCTTAGGGATCACTaGGTGTACCACATTGACCAT +
Preference number: 3 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRISLRDH*VYHIDH
Trigger: ATGGTCAATGTGGTACACCAAGTGATCCCTAAGACT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTCAGATAGAGCTCATATaGGTAGTAACCCAAGTCAGT +
Preference number: 3 (lower is better)
Translates to: ASLASWGCINEFFCVEVCQIELI*VVTQVS
Trigger: ACTGACTTGGGTTACTACCAATATGAGCTCTATCTG...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR TCA 72 bp AACAGCAGGCACCAAACAGCTATGAGGAAGCAGGTCTaGGCGCAGGCTGATCTAGTGATTAATGCTGAGTGT +
Preference number: 3 (lower is better)
Translates to: NSRHQTAMRKQV*AQADLVINAEC
Trigger: ACACTCAGCATTAATCACTAGATCAGCCTGCGCTCAGACCTGCTTCCTCATAGCTGTTTGGTGCCTGCTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp GGGGATGCAGCAGAGAAAGTGATGATCAAAGGTCACTaGGTGATGAGATGGGAGGAGACCCTCAAATCCATC +
Preference number: 3 (lower is better)
Translates to: GDAAEKVMIKGH*VMRWEETLKSI
Trigger: GATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAGTGACCTTTGATCATCACTTTCTCTGCTGCATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TGGTGTTATAGGACCAACACGTTTGTGTGCCCACTGTaGAGTAACAGACCAATGCACAGAGACAGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: WCYRTNTFVCPL*SNRPMHRDSGD
Trigger: ATCCCCACTGTCTCTGTGCATTGGTCTGTTACTGCACAGTGGGCACACAAACGTGTTGGTCCTATAACACCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp GAGTGTTCAGTACTATCTGTGGTTTCAGGCATCTACTaGGCACCTTGGAATGTATCCCCTGAGGATGAGGGA +
Preference number: 3 (lower is better)
Translates to: ECSVLSVVSGIY*APWNVSPEDEG
Trigger: TCCCTCATCCTCAGGGGATACATTCCAAGGTGCCCAGTAGATGCCTGAAACCACAGATAGTACTGAACACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACATCACTCTTGCTCATaGATCTTAGCATCCTCTCAG +
Preference number: 3 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEHHSCS*ILASSQ
Trigger: CTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTGCAAGTCATCACTCTaGCTCATTGATCTTAGCATC +
Preference number: 3 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWCKSSL*LIDLSI
Trigger: GATGCTAAGATCAATGAGCAAGAGTGATGACTTGCA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGCAAGTCATCACTCTaGCTCATTGATCTTAGCATC +
Preference number: 3 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRICKSSL*LIDLSI
Trigger: GATGCTAAGATCAATGAGCAAGAGTGATGACTTGCA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAAAAAGTACACCCTTTaGAAGAGTAGGGTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEKKYTL*KSRVRD
Trigger: GTCCCTCACCCTACTCTTCAAAAGGGTGTACTTTTT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCGAACATTTTTGTCCTaGTATGTGTTGCACATGTTG +
Preference number: 3 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMRTFLS*YVLHML
Trigger: CAACATGTGCAACACATACAAGGACAAAAATGTTCG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTCACATCGAACATTTTaGTCCTTGTATGTGTTGCAC +
Preference number: 3 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMSHRTF*SLYVLH
Trigger: GTGCAACACATACAAGGACAAAAATGTTCGATGTGA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR TCA 72 bp GGTGAATCAGCTTCTCGTGAGGTCCTTCAGATCAGCTaGTGTCAGTTGTTTCACTGGTACACAGGACCAAGA +
Preference number: 3 (lower is better)
Translates to: GESASREVLQIS*CQLFHWYTGPR
Trigger: TCTTGGTCCTGTGTACCAGTGAAACAACTGACATCAGCTGATCTGAAGGACCTCACGAGAAGCTGATTCACC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp GTTAGTCTTCCGAAGGTTTCTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTGCCCTGTAGTCCTAGC +
Preference number: 3 (lower is better)
Translates to: VSLPKVSPAFRG*NSNENVPCSPS
Trigger: GCTAGGACTACAGGGCACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGGAGAAACCTTCGGAAGACTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 72 bp AAGGACAGTCTGGAAGTGAACAGGCTTTTCCGGAAGTaGTGGCGTGGCTTTCAGATAGAGCTCATATTGGTA +
Preference number: 3 (lower is better)
Translates to: KDSLEVNRLFRK*WRGFQIELILV
Trigger: TACCAATATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCTGTTCACTTCCAGACTGTCCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 72 bp CAGGTGGAATGTGGGGTGACACAATGTGGTCTGGTCTaGAGAAGGTGGAGGCAATGGATTAGATATACACAT +
Preference number: 3 (lower is better)
Translates to: QVECGVTQCGLV*RRWRQWIRYTH
Trigger: ATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CCA 72 bp TGCCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACTTaGCTACCCCCATTCTCACTTCTTTCACTCTCACTT +
Preference number: 3 (lower is better)
Translates to: CLERALHSRFFT*LPPFSLLSLSL
Trigger: AAGTGAGAGTGAAAGAAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CCA 72 bp TCTGGAAGTGAACAGGCTTTTCCGGAAGTGCTGGCGTaGCTTTCAGATAGAGCTCATATTGGTAGTAACCCA +
Preference number: 3 (lower is better)
Translates to: SGSEQAFPEVLA*LSDRAHIGSNP
Trigger: TGGGTTACTACCAATATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCTGTTCACTTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCTAGAAAAAGCTTTTTaGGTCCTAGAGTATACTGGG +
Preference number: 3 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLEKAF*VLEYTG
Trigger: CCCAGTATACTCTAGGACCAAAAAAGCTTTTTCTAG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAAATCTGTCATCTGGTaGTCTTTAGACCTATCAGTA +
Preference number: 3 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIKSVIW*SLDLSV
Trigger: TACTGATAGGTCTAAAGACAACCAGATGACAGATTT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAACAGATGCTGTATATTaGCAAGTCATCACTCTTGCT +
Preference number: 3 (lower is better)
Translates to: LWNPELRIQFTLGSQPMETDAVY*QVITLA
Trigger: AGCAAGAGTGATGACTTGCAAATATACAGCATCTGT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATTCCACAAGCATGTGTaGGAAGGGTTATTTTCATCA +
Preference number: 3 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEFHKHV*EGLFSS
Trigger: TGATGAAAATAACCCTTCCAACACATGCTTGTGGAA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp AGCAGGCCCTCACCAATGTTACAGTATTGTCACCTCTaGCTTGAGGCTCCTAAAGAAGTGGTTAGACTTAGC +
Preference number: 3 (lower is better)
Translates to: SRPSPMLQYCHL*LEAPKEVVRLS
Trigger: GCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTGTAACATTGGTGAGGGCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp CATGAAAATGCAGATTCTGATTCAACAAGTCTAGGGTaGGGCCTGAGGGCCTGCCTTTCTAACAAATTCCCA +
Preference number: 3 (lower is better)
Translates to: HENADSDSTSLG*GLRACLSNKFP
Trigger: TGGGAATTTGTTAGAAAGGCAGGCCCTCAGGCCCCACCCTAGACTTGTTGAATCAGAATCTGCATTTTCATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATTATTACAAAGTACTaGAGCTTTGGGGCTATGTCA +
Preference number: 3 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEIITKY*SFGAMS
Trigger: TGACATAGCCCCAAAGCTCAAGTACTTTGTAATAAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp TGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTaGGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAA +
Preference number: 3 (lower is better)
Translates to: CSLVKRTQSTNG*ARILTQLPLSK
Trigger: TTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
3UTR GCA 72 bp TTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTaGCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACT +
Preference number: 3 (lower is better)
Translates to: FCPCMCCTCCSL*LERALHSRFFT
Trigger: AGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCAGAGAGAGCAACATGTGCAACACATACAAGGACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 72 bp AGGTTTGAATCCCCTGGTGCTAACCAATATGCACACTaGCTCCCAGGAATCCAGGGAATATTAGGGAATAAT +
Preference number: 3 (lower is better)
Translates to: RFESPGANQYAH*LPGIQGILGNN
Trigger: ATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATATTGGTTAGCACCAGGGGATTCAAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CCA 72 bp GTAGCACTCTCAGCTGCAATGTGCATGCAAATCGCCTaGAGGTCCATGAAAATGCAGATTCTGATTCAACAA +
Preference number: 3 (lower is better)
Translates to: VALSAAMCMQIA*RSMKMQILIQQ
Trigger: TTGTTGAATCAGAATCTGCATTTTCATGGACCTCCAGGCGATTTGCATGCACATTGCAGCTGAGAGTGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp GATTGGTTGGGTAAGACGGATGAAATCATCAGGATGTaGAAACCGCATTCTTTGGTGAATCAGCTTCTCGTG +
Preference number: 3 (lower is better)
Translates to: DWLGKTDEIIRM*KPHSLVNQLLV
Trigger: CACGAGAAGCTGATTCACCAAAGAATGCGGTTTCCACATCCTGATGATTTCATCCGTCTTACCCAACCAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTGTGCACAGTGCTCCTaGGAGTTCTGCCACACAGCT +
Preference number: 3 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCCAQCS*EFCHTA
Trigger: AGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCACA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTCCAGGAAGCCTTCCTaGACTCTCTTGATCTGCTTT +
Preference number: 3 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLSRKPS*TLLICF
Trigger: AAAGCAGATCAAGAGAGTCAAGGAAGGCTTCCTGGA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp CAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCATTAGAATGGTATCTTaGGGGGAATTAACAGGAGTG +
Preference number: 3 (lower is better)
Translates to: QCGLVCRRWRQWIRYTHSIRMVS*GELTGV
Trigger: CACTCCTGTTAATTCCCCCAAAGATACCATTCTAAT...GCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR TCA 72 bp TCGTGTTCATGCCCTGTATTATGCCCTCTTTCAGCGTaGACAAGACTTGTAAATATGATGGGCTATGCATCA +
Preference number: 3 (lower is better)
Translates to: SCSCPVLCPLSA*TRLVNMMGYAS
Trigger: TGATGCATAGCCCATCATATTTACAAGTCTTGTTCACGCTGAAAGAGGGCATAATACAGGGCATGAACACGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp AGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTaGGTTTGGCAAATGTCAAGTTTTGCCAGGTACCTT +
Preference number: 3 (lower is better)
Translates to: RLLRTVMKELWL*VWQMSSFARYL
Trigger: AAGGTACCTGGCAAAACTTGACATTTGCCAAACCCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp ACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATaGATTAGATATACACATAGCAACATGAATGGATCT +
Preference number: 3 (lower is better)
Translates to: TQCGLVCRRWRQ*IRYTHSNMNGS
Trigger: AGATCCATTCATGTTGCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGT
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATATACTGGGCTAGGGTaGTGGGGAGGTACAGAAGAA +
Preference number: 3 (lower is better)
Translates to: CICVMLGCYARTCNSSVTYTGLG*WGGTEE
Trigger: TTCTTCTGTACCTCCCCACAACCCTAGCCCAGTATA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGTCTCCTGGTCTGCTTaGCTGAGAATGGATTCTCCA +
Preference number: 3 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCVSWSA*LRMDSP
Trigger: TGGAGAATCCATTCTCAGCAAAGCAGACCAGGAGAC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp TCCAGTTCACACTGGGCTCTCAACCCATGGAAACTGTaGGATAATAAATTTGTGTTGTTTTGCTCTCCTAGT +
Preference number: 3 (lower is better)
Translates to: SSSHWALNPWKL*DNKFVLFCSPS
Trigger: ACTAGGAGAGCAAAACAACACAAATTTATTATCTCACAGTTTCCATGGGTTGAGAGCCCAGTGTGAACTGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR TCA 72 bp AATGGAGTATTTTCCTCAACAGAAACAGGGACGCAATaGGTAAAGGGCAAAAGTAGGCAGAATTCTAGGATG +
Preference number: 3 (lower is better)
Translates to: NGVFSSTETGTQ*VKGKSRQNSRM
Trigger: CATCCTAGAATTCTGCCTACTTTTGCCCTTTACTCATTGCGTCCCTGTTTCTGTTGAGGAAAATACTCCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTaGACATGTTGCTCTCTCTGCCTAGAGAGAGCCCTT +
Preference number: 3 (lower is better)
Translates to: INHIEHFCPCMC*TCCSLCLERAL
Trigger: AAGGGCTCTCTCTAGGCAGAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR GCA 72 bp GATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATaGAATCCCTGTACCAGAAAACAAAGAGAACAAAAC +
Preference number: 3 (lower is better)
Translates to: DDSAPWTEEYEK*NPCTRKQREQN
Trigger: GTTTTGTTCTCTTTGTTTTCTGGTACAGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CCA 72 bp AAATACCACAGTATATGGAGTGTTCAGTACTATCTGTaGTTTCAGGCATCTACTGGGCACCTTGGAATGTAT +
Preference number: 3 (lower is better)
Translates to: KYHSIWSVQYYL*FQASTGHLGMY
Trigger: ATACATTCCAAGGTGCCCAGTAGATGCCTGAAACCACAGATAGTACTGAACACTCCATATACTGTGGTATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp AAATTGTCTATTGAGTATGGCAGTCCTCCTCATCTATaGCTTCAGTTACCTGTGGTCAACTGTGGAATGAAA +
Preference number: 3 (lower is better)
Translates to: KLSIEYGSPPHL*LQLPVVNCGMK
Trigger: TTTCATTCCACAGTTGACCACAGGTAACTGAAGCCATAGATGAGGAGGACTGCCATACTCAATAGACAATTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CCA 72 bp CTTCTTTCACTCTCACTTTGTTCTCACTTCTTTACTTaGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGG +
Preference number: 3 (lower is better)
Translates to: LLSLSLCSHFFT*LPPICPLKFSW
Trigger: CCAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAAAGTGAGAGTGAAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAAAAAGTACACCCTTTaGAAGAGTAGGGTGAGGGAC +
Preference number: 3 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCKKYTL*KSRVRD
Trigger: GTCCCTCACCCTACTCTTCAAAAGGGTGTACTTTTT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCCTTCCTTGACTCTCTaGATCTGCTTTAAATACCCC +
Preference number: 3 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLPSLTL*ICFKYP
Trigger: GGGGTATTTAAAGCAGATCAAGAGAGTCAAGGAAGG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR TCA 72 bp TTTGATTCAGTCGATCTGACATGGGGACTGAGAGTTTaGCTTTTAATAAATTCCCAGGTGATAGTACTGCTG +
Preference number: 3 (lower is better)
Translates to: FDSVDLTWGLRV*LLINSQVIVLL
Trigger: CAGCAGTACTATCACCTGGGAATTTATTAAAAGTCAAACTCTCAGTCCCCATGTCAGATCGACTGAATCAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TTAGCATCCTCTCAGATTATTGGTCAGAGCGATCTTTaGTCACTTAACCATTGTGAAAATCTGTCATCTGGT +
Preference number: 3 (lower is better)
Translates to: LASSQIIGQSDL*SLNHCENLSSG
Trigger: ACCAGATGACAGATTTTCACAATGGTTAAGTGAGCAAAGATCGCTCTGACCAATAATCTGAGAGGATGCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTTCTCACTTCTTTACTaGGTTACCTCCTATCTGTCC +
Preference number: 3 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLFSLLY*VTSYLS
Trigger: GGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAA...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR-3UTR CAA 90 bp TACAGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTATTAGAATGGTATCTTaGGGGGAATTAACAGGAGTG +
Preference number: 3 (lower is better)
Translates to: YRLRHTKILTVVSLVGRIIRMVS*GELTGV
Trigger: CACTCCTGTTAATTCCCCCAAAGATACCATTCTAAT...AATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCTGTA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAAATAAATTGTCTATaGAGTATGGCAGTCCTCCTC +
Preference number: 3 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCEINCL*SMAVLL
Trigger: GAGGAGGACTGCCATACTCAATAGACAATTTATTTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATTCCACAAGCATGTGTaGGAAGGGTTATTTTCATCA +
Preference number: 3 (lower is better)
Translates to: CICVMLGCYARTCNSSVTFHKHV*EGLFSS
Trigger: TGATGAAAATAACCCTTCCAACACATGCTTGTGGAA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TTCAGAAGCACTGACTTTATACAGATGCTGTATATTTaGAAGTCATCACTCTTGCTCATTGATCTTAGCATC +
Preference number: 3 (lower is better)
Translates to: FRSTDFIQMLYI*KSSLLLIDLSI
Trigger: GATGCTAAGATCAATGAGCAAGAGTGATGACTTGCAAATATACAGCATCTGTATAAAGTCAGTGCTTCTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATATTATTACAAAGTACTaGAGCTTTGGGGCTATGTCA +
Preference number: 3 (lower is better)
Translates to: KICHLVVFRPISSVFRGYIITKY*SFGAMS
Trigger: TGACATAGCCCCAAAGCTCAAGTACTTTGTAATAAT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TGCATACTAGTCATTATTTCACAGTTACAATTCATCTaGATCTGTGTGATGCTTGGTTGTTATGCTAGAACT +
Preference number: 3 (lower is better)
Translates to: CILVIISQLQFI*ICVMLGCYART
Trigger: AGTTCTAGCATAACAACCAAGCATCACACAGATGCAGATGAATTGTAACTGTGAAATAATGACTAGTATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp AATGGGAATGATTTGGTTCTATTTCTCCAATGTGTGTaGATTTCCACGGGACGCATATCTAATATATTTCAT +
Preference number: 3 (lower is better)
Translates to: NGNDLVLFLQCV*ISTGRISNIFH
Trigger: ATGAAATATATTAGATATGCGTCCCGTGGAAATGCACACACATTGGAGAAATAGAACCAAATCATTCCCATT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR GCA 72 bp TTCAGCGTGAACAAGACTTGTAAATATGATGGGCTATaGATCACTCACATGATTATATTATGTAATATCGCA +
Preference number: 3 (lower is better)
Translates to: FSVNKTCKYDGL*ITHMIILCNIA
Trigger: TGCGATATTACATAATATAATCATGTGAGTGATGCATAGCCCATCATATTTACAAGTCTTGTTCACGCTGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCGCCCGCACTCTCCATaGGCCGCCCGAGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKRPHSP*AARAVA
Trigger: GGCAACAGCTCGGGCGGCGCATGGAGAGTGCGGGCG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGCACTGGAACAGGTCTaGAGTTGGGGGAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKALEQV*SWGSCP
Trigger: GGGGCAACTCCCCCAACTTCAGACCTGTTCCAGTGC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCACTGGGGCAGGATCTaGGCTTGGCTCTTGGTCCCA +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKHWGRI*AWLLVP
Trigger: TGGGACCAAGAGCCAAGCTCAGATCCTGCCCCAGTG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGCATGCCACACTCACTaGGGGCCCAGTGTGGAACGA +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKACHTH*GPSVER
Trigger: TCGTTCCACACTGGGCCCCCAGTGAGTGTGGCATGC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp CTGTACCCGGCTCGGATCGAGAAGGGACCTTGGGGCTaGGGAGGCAGAGCCATTCCAAAGAGGGGGATGATA +
Preference number: 4 (lower is better)
Translates to: LYPARIEKGPWG*GGRAIPKRGMI
Trigger: TATCATCCCCCTCTTTGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGATCCGAGCCGGGTACAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCAGTCAGCTTGGTGGTaGTGGGGGTTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKQSAWW*WGFCCQ
Trigger: CTGGCAGCAAAACCCCCATCACCACCAAGCTGACTG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGCACTGGAACAGGTCTaGAGTTGGGGGAGTTGCCCC +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMALEQV*SWGSCP
Trigger: GGGGCAACTCCCCCAACTTCAGACCTGTTCCAGTGC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGGCTTCAGTGCCTCCCTaGCCTCCTGGGGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMASVPP*PPGAAL
Trigger: TAATGCAGCCCCAGGAGGCCAGGGAGGCACTGAAGC...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTGGGCGAAGCGGGCCTaGCCTGTGGTGGTTACTTCT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMWAKRA*PVVVTS
Trigger: AGAAGTAACCACCACAGGCCAGGCCCGCTTCGCCCA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAGGTCAACATGCAGCTaGGCAGGGAGGACACCATTG +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKRSTCS*AGRTPL
Trigger: CAATGGTGTCCTCCCTGCCCAGCTGCATGTTGACCT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGCTCCATACCCAGCTTaGAGCCGCCCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEAPYPA*SRPHSP
Trigger: TGGAGAGTGCGGGCGGCTTCAAGCTGGGTATGGAGC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTCTCCAGCGCGAATGGTaGAGGCTGGGTTATCCACGA +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCLQREW*RLGYPR
Trigger: TCGTGGATAACCCAGCCTTCACCATTCGCGCTGGAG...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCTCCAGCGCGAATGGTaGAGGCTGGGTTATCCACGA +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMLQREW*RLGYPR
Trigger: TCGTGGATAACCCAGCCTTCACCATTCGCGCTGGAG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCAGTCAGCTTGGTGGTaGTGGGGGTTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMQSAWW*WGFCCQ
Trigger: CTGGCAGCAAAACCCCCATCACCACCAAGCTGACTG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGATCCTGCTCAGGATGTaGATCATCCCCTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKILLRM*IIPSSS
Trigger: GCTAGACGAGGGGATGATTCACATCCTGAGCAGGAT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGGCACCAAACAGCTATaGGGAAGCAGGTCTGAGCGC +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMGTKQL*GSRSER
Trigger: GCGCTCAGACCTGCTTCCTCATAGCTGTTTGGTGCC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGGGGATCCTGGAGGGTaGAGGGCTGAAAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMGDPGG*RAEKPG
Trigger: ACCTGGTTTTTCAGCCCTTCACCCTCCAGGATCCCC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTGTGGAACCCTGAGCTaGGAATCCAGTTCACACTGG +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKCGTLS*ESSSHW
Trigger: CCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGGGGGAAGAAGAGGGTaGCCTGGTGCTTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIGGRRG*PGACGS
Trigger: AGAACCGCAAGCACCAGGGCACCCTCTTCTTCCCCC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGCAGAAGCAAACCCATaGCAGGGCCAGACTTTAACC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKAEANP*QGQTLT
Trigger: GGTTAAAGTCTGGCCCTGGCATGGGTTTGCTTCTGC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCCAGTCTCTGCTCGGTaGTCAGGGACATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKPVSAR*SGTFPS
Trigger: TGAAGGAAATGTCCCTGACCACCGAGCAGAGACTGG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCCGGAAGTGCTGGCGTaGCTTTCAGATAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKPEVLA*LSDRAH
Trigger: ATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGATAAGACTTCCACACTaGCTTCAGTGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKIRLPH*LQCLPG
Trigger: GCCAGGGAGGCACTGAAGCCAGTGTGGAAGTCTTAT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGGGCGAAGCGGGCCTaGCCTGTGGTGGTTACTTCT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIWAKRA*PVVVTS
Trigger: AGAAGTAACCACCACAGGCCAGGCCCGCTTCGCCCA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCTTGTAGGAGGGCTGTaGGGGATGAGTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILVGGL*GMSVGS
Trigger: GCTCCCCACACTCATCCCCCACAGCCCTCCTACAAG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGACAGCTTCAGTGGCTTaGGGAAGCACTGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKTASVA*GSTGTG
Trigger: ACCTGTTCCAGTGCTTCCCCAAGCCACTGAAGCTGT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp TCTCCACCTGCGAGCGATGATAGGATCAGGATGCCCTaGGTCTCACCCAGGTGGCTGGGCTCGAATAAGACT +
Preference number: 4 (lower is better)
Translates to: SPPASDDRIRMP*VSPRWLGSNKT
Trigger: AGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCCTATCATCGCTCGCAGGTGGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTTCCAAAGAGGGGGATaGTATACTCTCCACCTGCGA +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKFQRGG*YTLHLR
Trigger: TCGCAGGTGGAGAGTATATCATCCCCCTCTTTGGAA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGGGCTGAAATTCAAATaGGAACGTGCCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKGLKFK*ERALGV
Trigger: AACTCCGAGGGCACGTTCTCATTTGAATTTCAGCCC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCTAGATCGGACTTCCTaGGGGTGGGGCTCAGCAATC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILDRTS*GWGSAI
Trigger: GATTGCTGAGCCCCACCCTCAGGAAGTCCGATCTAG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGGGGATCCTGGAGGGTaGAGGGCTGAAAAACCAGGT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWGDPGG*RAEKPG
Trigger: ACCTGGTTTTTCAGCCCTTCACCCTCCAGGATCCCC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
56% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTTTGCCAGCCTCTCCTaGTCCCTCTTCTTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIFASLS*SLFFRS
Trigger: CGAGCGGAAGAAGAGGGAGCAGGAGAGGCTGGCAAA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTTTTTCTCACCTTGGTaGACTCCGGGTCCCACGTTT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKFFSPW*TPGPTF
Trigger: AAACGTGGGACCCGGAGTGCACCAAGGTGAGAAAAA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTCCTGCAGGTCAACATaGAGCTGGGCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRISCRST*SWAGRT
Trigger: TGTCCTCCCTGCCCAGCTGCATGTTGACCTGCAGGA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGCTGGCTATAAGCCATaGTGGGGCTGGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMAGYKP*WGWWHV
Trigger: AACATGCCACCAGCCCCAGCATGGCTTATAGCCAGC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTAAGAAGAGGGTGCCCTaGTGCTTGCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCKKRVP*CLRFSK
Trigger: CTTGGAGAACCGCAAGCACCAGGGCACCCTCTTCTT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATCGAGAAGGGACCTTaGGGCTTGGGAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEIEKGP*GLGGRA
Trigger: GGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGAGGTCAACATGCAGCTaGGCAGGGAGGACACCATTG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMRSTCS*AGRTPL
Trigger: CAATGGTGTCCTCCCTGCCCAGCTGCATGTTGACCT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTGTGTAGGGCAGATGTaGGATTCGGACACTGATGGT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKCVGQM*DSDTDG
Trigger: ACCATCAGTGTCCGAATCCCACATCTGCCCTACACA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTCAACAAGTCTAGGGTaGGGCCTGAGGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWSTSLG*GLRACL
Trigger: AAGGCAGGCCCTCAGGCCCCACCCTAGACTTGTTGA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCCTCTGGTGAATAGGTaGAAGGAGGCACATTTTGGG +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKPLVNR*KEAHFG
Trigger: CCCAAAATGTGCCTCCTTCCACCTATTCACCAGAGG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCCATGCTGGGGCTGGTaGCATGTTAGACAAGATTTC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKPCWGW*HVRQDF
Trigger: GAAATCTTGTCTAACATGCCACCAGCCCCAGCATGG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGGCTTGGGGAAGCACTaGAACAGGTCTGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMGLGKH*NRSEVG
Trigger: CCCAACTTCAGACCTGTTCCAGTGCTTCCCCAAGCC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp GGGCAGCTCACAGTCAGCTTGGTGGTGATGGGGGTTTaGCTGCCAGATGGGTTTCCTTCAAAGGAGACTGTG +
Preference number: 4 (lower is better)
Translates to: GQLTVSLVVMGV*LPDGFPSKETV
Trigger: CACAGTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACCCCCATCACCACCAAGCTGACTGTGAGCTGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGGCTGGAATAATGCCTaGTCCAGGTCAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKGWNNA*SRSIPE
Trigger: TTCAGGAATTGACCTGGATCAGGCATTATTCCAGCC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAAGAGGGTGCCCTGGTaGTTGCGGTTCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWKRVPW*LRFSKF
Trigger: GAACTTGGAGAACCGCAAGCACCAGGGCACCCTCTT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATCCTGCAGGTCAACATaGAGCTGGGCAGGGAGGACA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESCRST*SWAGRT
Trigger: TGTCCTCCCTGCCCAGCTGCATGTTGACCTGCAGGA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTCAGAGGTGTATGTCTaGAGAAGCAAACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKSEVYV*RSKPMP
Trigger: TGGCATGGGTTTGCTTCTGCAGACATACACCTCTGA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCCGGAAGTGCTGGCGTaGCTTTCAGATAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMPEVLA*LSDRAH
Trigger: ATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGATAAGACTTCCACACTaGCTTCAGTGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMIRLPH*LQCLPG
Trigger: GCCAGGGAGGCACTGAAGCCAGTGTGGAAGTCTTAT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTCTCACCCAGGTGGCTaGGCTCGAATAAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMSHPGG*ARIRLP
Trigger: TGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTTGGTCTCACCCAGGTaGCTGGGCTCGAATAAGACT +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCLVSPR*LGSNKT
Trigger: AGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTTGGTCTCACCCAGGTaGCTGGGCTCGAATAAGACT +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMLVSPR*LGSNKT
Trigger: AGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGGTTTTGCTGCCAGATaGGTTTCCTTCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKGFAAR*VSFKGD
Trigger: GTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCTGGTAGCTGGATTTTaGCCAGTTTGCGGCGACTCC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLVAGF*PVCGDS
Trigger: GGAGTCGCCGCAAACTGGCCAAAATCCAGCTACCAG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGATGTACTCTGGTAGCTaGATTTTGGCCAGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKMYSGS*ILASLR
Trigger: CCGCAAACTGGCCAAAATCCAGCTACCAGAGTACAT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATCAACAAGTCTAGGGTaGGGCCTGAGGGCCTGCCTT +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESTSLG*GLRACL
Trigger: AAGGCAGGCCCTCAGGCCCCACCCTAGACTTGTTGA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCTCCCGGAAGAGTTCTaGACTGGGGTTTTTAAGGGG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMLPEEF*TGVFKG
Trigger: CCCCTTAAAAACCCCAGTCCAGAACTCTTCCGGGAG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAATGCACAGAGACAGTaGGGATGCAGCAGAGAAAGT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKNAQRQ*GCSRES
Trigger: ACTTTCTCTGCTGCATCCCCACTGTCTCTGTGCATT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATATTGGCATGAGCCTGTaGATGCCACCCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDIGMSL*MPPLEE
Trigger: CTCTTCCAGGGGTGGCATCCACAGGCTCATGCCAAT...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp TTGAGCCTCCTGATGAGGATGCAGCTGGCCAGCACCTaGATTTCAGCCTTGTGGAACCCTGAGCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: LSLLMRMQLAST*ISALWNPELRI
Trigger: GATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGCTGCATCCTCATCAGGAGGCTCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGTTTTCTCACCCAGCTTaGAGCCGCCCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEFSHPA*SRPHSP
Trigger: TGGAGAGTGCGGGCGGCTTCAAGCTGGGTGAGAAAA...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAGAAACCTCCATGCCTaGGGTAATATAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKRNLHA*GNIAFF
Trigger: GAAGAAGGCTATATTACCTCAGGCATGGAGGTTTCT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTTCCAAAGAGGGGGATaGTATACTCTCCACCTGCGA +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCFQRGG*YTLHLR
Trigger: TCGCAGGTGGAGAGTATATCATCCCCCTCTTTGGAA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGATGTGCAGATGGGTTaGGAATCCCTGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEDVQMG*ESLLSC
Trigger: GCAGGAGAGCAGGGATTCTCAACCCATCTGCACATC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAGCCTTGTGGAACCCTaGGCTGAGAATCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWSLVEP*AENPVH
Trigger: GTGAACTGGATTCTCAGCTCAGGGTTCCACAAGGCT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAAGAGGGTGCCCTGGTaGTTGCGGTTCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEKRVPW*LRFSKF
Trigger: GAACTTGGAGAACCGCAAGCACCAGGGCACCCTCTT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGAGGCTTTTCCGGAAGTaGTGGCGTGGCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMRLFRK*WRGFQI
Trigger: TATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTCTGGCCTCCTGGGGCTaGATTAATGAGTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCLASWG*INEFFC
Trigger: GCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAG...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCGCCCGCACTCTCCATaGGCCGCCCGAGCTGTTGCC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWRPHSP*AARAVA
Trigger: GGCAACAGCTCGGGCGGCGCATGGAGAGTGCGGGCG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATGCTCTCCTGCTGAATaGTATCCAAGGCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMECSPAE*YPRRGV
Trigger: CACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGCAGAAGCAAACCCATaGCAGGGCCAGACTTTAACC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIAEANP*QGQTLT
Trigger: GGTTAAAGTCTGGCCCTGGCATGGGTTTGCTTCTGC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGCTCCTTGGAGTTCTaGCACACAGCTACCCTGACA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRICSLEF*HTATLT
Trigger: TGTCAGGGTAGCTGTGTGGCAGAACTCCAAGGAGCA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCAAGGCCCAGACCAATaGCTACCTTTAGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMQGPDQ*LPLGQK
Trigger: CTTCTGACCTAAAGGTAGGCATTGGTCTGGGCCTTG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GAAGAGTGCACAGGTGGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGCAATGTGGTCTGGTCTaGAGAAGGTGGAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: EECTGGMWGDTMWSGLQKQCGLV*RRWRQW
Trigger: CCATTGCCTCCACCTTCTGCAGACCAGACCACATTG...CTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTGTGCACTCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCCAGGAGCCACTTTGTaGCCAATATCTTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWPGATL*PISLGL
Trigger: CAGCCCCAAAGATATTGGCCACAAAGTGGCTCCTGG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCCTCTAAAGTTCAGCTaGGGAACTACCTTGTCCAGG +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMPLKFS*GTTLSR
Trigger: CCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCTCCAGGTGGCAGGTTaGGAATCTGGCAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLQVAG*ESGRKG
Trigger: ACCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCTTTTCCGGAAGTGCTaGCGTGGCTTTCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMLFRKC*RGFQIE
Trigger: CTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCATAAGACTTCCACACTaGCTTCAGTGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIIRLPH*LQCLPG
Trigger: GCCAGGGAGGCACTGAAGCCAGTGTGGAAGTCTTAT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGGATCAGGATGCCCTTaGTCTCACCCAGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLGSGCP*SHPGGW
Trigger: CCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTATCGAGAAGGGACCTTaGGGCTTGGGAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLIEKGP*GLGGRA
Trigger: GGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGAT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGAGGTGGCCCATCTGTaGGGAGAAAGCAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWEVAHL*GESNCS
Trigger: GCTACAATTGCTTTCTCCCCACAGATGGGCCACCTC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTGTGTAGGGCAGATGTaGGATTCGGACACTGATGGT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMCVGQM*DSDTDG
Trigger: ACCATCAGTGTCCGAATCCCACATCTGCCCTACACA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGAATCTCAAACCAGCCTaGAAGAGGGTTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMNLKPA*KRVHTG
Trigger: CCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp ATGAGGATGCAGCTGGCCAGCACCTTGATTTCAGCCTaGTGGAACCCTGAGCTGAGAATCCAGTTCACACTG +
Preference number: 4 (lower is better)
Translates to: MRMQLASTLISA*WNPELRIQFTL
Trigger: CAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGCTGCATCCTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp CTGCCAGATGGGTTTCCTTCAAAGGAGACTGTGATGTaGTTGATCTTCTTGGGCCGCACAGACTCTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LPDGFPSKETVM*LIFLGRTDSPA
Trigger: CGCTGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACATCACAGTCTCCTTTGAAGGAAACCCATCTGGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTG +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMPAFRG*NSNENV
Trigger: CACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTTCCAAAGAGGGGGATaGTATACTCTCCACCTGCGA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWFQRGG*YTLHLR
Trigger: TCGCAGGTGGAGAGTATATCATCCCCCTCTTTGGAA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCTGGGTTATCCACGATaGTGGAGAAGGTCACCATGT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILGYPR*WRRSPC
Trigger: ACATGGTGACCTTCTCCATCATCGTGGATAACCCAG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTCTCCAGCGCGAATGGTaGAGGCTGGGTTATCCACGA +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLLQREW*RLGYPR
Trigger: TCGTGGATAACCCAGCCTTCACCATTCGCGCTGGAG...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCTGGTCTGCTCCTCTTaGGCCTTTGTAGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILVCSS*AFVVFV
Trigger: CACAAACACTACAAAGGCTCAAGAGGAGCAGACCAG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGAGCCAAGAGAAAAAGTaGTGGGAGTGTCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMSQEKK*WECPWI
Trigger: AATCCAGGGACACTCCCATCACTTTTTCTCTTGGCT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGTGGGATTCGGACACTaGTGGTATAAAAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMVGFGH*WYKSQE
Trigger: CTCTTGGCTTTTATACCATCAGTGTCCGAATCCCAC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATCCTGCTCAGGATGTaGATCATCCCCTCGTCTAGC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEILLRM*IIPSSS
Trigger: GCTAGACGAGGGGATGATTCACATCCTGAGCAGGAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCCTGGTCTGCTTTGCTaGGAATGGATTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMPGLLC*EWILQC
Trigger: ACATTGGAGAATCCATTCTCAGCAAAGCAGACCAGG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGCTGACACAATCCTATaGATGAAGGTAGGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMADTIL*MKVGAL
Trigger: TAGCGCACCTACCTTCATTCATAGGATTGTGTCAGC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAGCCTTGTGGAACCCTaGGCTGAGAATCCAGTTCAC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESLVEP*AENPVH
Trigger: GTGAACTGGATTCTCAGCTCAGGGTTCCACAAGGCT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCTGGATTCCTGTCTGTaGAGCAAGAGCCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLDSCL*SKSRSK
Trigger: TTTTGACCGGCTCTTGCTGCACAGACAGGAATCCAG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGGCTTTTCCGGAAGTaGTGGCGTGGCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIRLFRK*WRGFQI
Trigger: TATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATGGGGCCTGAGGGCCTaGCTTTCTAACAAATTCCCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEWGLRA*LSNKFP
Trigger: TGGGAATTTGTTAGAAAGGCAGGCCCTCAGGCCCCA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTCTGAACAGCCCCCATaGACTCCTCAAGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWSEQPP*TPQVFY
Trigger: GTAGAAGACTTGAGGAGTCCATGGGGGCTGTTCAGA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACCAGGAGCCACTTTGTaGCCAATATCTTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEPGATL*PISLGL
Trigger: CAGCCCCAAAGATATTGGCCACAAAGTGGCTCCTGG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTCTCGCTTCTTCACTTaGCTACCCCCATTCTCACTT +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCSRFFT*LPPFSL
Trigger: AAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTCTCGCTTCTTCACTTaGCTACCCCCATTCTCACTT +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMSRFFT*LPPFSL
Trigger: AAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCTTTTCCGGAAGTGCTaGCGTGGCTTTCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILFRKC*RGFQIE
Trigger: CTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTTCACAAGGATGATTTaGCTGCTGCCAAGGACAGTC +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMFTRMI*LLPRTV
Trigger: GACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTGGCCCCAAAGCACATaGGTAGTGATGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWWPQST*VVMLAY
Trigger: ATATGCCAGCATCACTACCCATGTGCTTTGGGGCCA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGTTATGGCTGTGGGTTTaGCAAATGTCAAGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKLWLWV*QMSSFA
Trigger: GGCAAAACTTGACATTTGCCAAACCCACAGCCATAA...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGGCTATAAGCCATGCTaGGGCTGGTGGCATGTTAGA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEGYKPC*GWWHVR
Trigger: TCTAACATGCCACCAGCCCCAGCATGGCTTATAGCC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAATCTCAAACCAGCCTaGAAGAGGGTTCACACTGGG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWNLKPA*KRVHTG
Trigger: CCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGGAGCCCCATTCCCATaGTATTCTGTGCACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEGAPFP*YSVHSA
Trigger: AGCACTGTGCACAGAATACCATGGGAATGGGGCTCC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATTGTCCACACTTGGCCTaGAACAAATGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDCPHLA*NKWSHP
Trigger: TGGATGGCTCCATTTGTTCCAGGCCAAGTGTGGACA...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAAGACCCCGCCGCCGCTaGGGGGCTCCATACCCAGCT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTRPRRR*GAPYPA
Trigger: AGCTGGGTATGGAGCCCCTCAGCGGCGGCGGGGTCT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAGACCCCGCCGCCGCTaGGGGGCTCCATACCCAGCT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCRPRRR*GAPYPA
Trigger: AGCTGGGTATGGAGCCCCTCAGCGGCGGCGGGGTCT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGACTTTTCATTTGCTGTaGGGTTCCTGGGGAGATCGA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWTFHLL*GSWGDR
Trigger: TCGATCTCCCCAGGAACCTCACAGCAAATGAAAAGT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGAGAAGGTCACTAGTGTaGTACCTGTGCCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMRRSLV*YLCLLD
Trigger: ATCAAGAAGGCACAGGTATCACACTAGTGACCTTCT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGTGGGATTCGGACACTaGTGGTATAAAAGCCAAGAG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIVGFGH*WYKSQE
Trigger: CTCTTGGCTTTTATACCATCAGTGTCCGAATCCCAC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGATGATCAAAGGTCACTaGGTGATGAGATGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWMIKGH*VMRWEE
Trigger: CTCCTCCCATCTCATCACTCAGTGACCTTTGATCAT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTGTGACCATTCCTGTTaGAACTCTTCTAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMCDHSC*NSSRLG
Trigger: CCCTAGTCTAGAAGAGTTTCAACAGGAATGGTCACA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGCTGACACAATCCTATaGATGAAGGTAGGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIADTIL*MKVGAL
Trigger: TAGCGCACCTACCTTCATTCATAGGATTGTGTCAGC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGGCAGAATTCTAGGATaGCCTCCAATATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEGRILG*PPIFPP
Trigger: GGGTGGGAATATTGGAGGTCATCCTAGAATTCTGCC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGAAACAGGGACGCAATaGGTAAAGGGCAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWETGTQ*VKGKSR
Trigger: CCTACTTTTGCCCTTTACTCATTGCGTCCCTGTTTC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGTCCCATTTAAACCTTaGACCCACATCGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIVPFKP*THIACV
Trigger: AACACAGGCGATGTGGGTGCAAGGTTTAAATGGGAC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGTCCCATTTAAACCTTaGACCCACATCGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWVPFKP*THIACV
Trigger: AACACAGGCGATGTGGGTGCAAGGTTTAAATGGGAC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTAAGAGGGTGCCCTGGTaGTTGCGGTTCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLKRVPW*LRFSKF
Trigger: GAACTTGGAGAACCGCAAGCACCAGGGCACCCTCTT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATGATAGGATCAGGATaGCCTTGGTCTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEMIGSG*PWSHPG
Trigger: ACCTGGGTGAGACCAAGGGCATCCTGATCCTATCAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTCTGACGTGGCTGGCTaGTTTCTTTTGATGAATGGG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRISDVAG*FLLMNG
Trigger: CCCATTCATCAAAAGAAAGCAGCCAGCCACGTCAGA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATTCAAATGAGAACGTaGCCTCGGAGTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEIQMRT*PRSWQA
Trigger: TGCCTGCCAACTCCGAGGGCACGTTCTCATTTGAAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTGGGTTGAGAATCCCTaGTCTCCTGCTGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWWVENP*SPAECY
Trigger: ATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCCA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTCAGAGGTGTATGTCTaGAGAAGCAAACCCATGCCA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRISEVYV*RSKPMP
Trigger: TGGCATGGGTTTGCTTCTGCAGACATACACCTCTGA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCACCCCTTCGTGTTCATaGCCTGTATTATGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRITPSCS*PVLCPL
Trigger: AAGAGGGCATAATACAGGGCATGAACACGAAGGGGT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATGGCCAGTCTCTGCTCGGTaGTCAGGGACATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: ARILTQLPLSKRERSWRWPVSAR*SGTFPS
Trigger: TGAAGGAAATGTCCCTGACCACCGAGCAGAGACTGG...CCATCTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATATCAATTGGGAACCTaGACAGTGGTGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEYQLGT*TVVGSS
Trigger: GCTGGATCCCACCACTGTCCAGGTTCCCAATTGATA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGATGAGTTTTTCTGCGTaGAAGTCTGTACAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMMSFSA*KSVQSV
Trigger: GACCGACTGTACAGACTTCCACGCAGAAAAACTCAT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGCGAATGGTGAAGGCTaGGTTATCCACGATGATGGA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEANGEG*VIHDDG
Trigger: TCCATCATCGTGGATAACCCAGCCTTCACCATTCGC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAGTCCTCCTCATCTATaGCTTCAGTTACCTGTGGTC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWSPPHL*LQLPVV
Trigger: GACCACAGGTAACTGAAGCCATAGATGAGGAGGACT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACCTCTGGTGAATAGGTaGAAGGAGGCACATTTTGGG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEPLVNR*KEAHFG
Trigger: CCCAAAATGTGCCTCCTTCCACCTATTCACCAGAGG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGAGTGTGCTGCAACCTaGGTTCGTTTTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWECAAT*VRFCFS
Trigger: GGAGAAACAAAAACGAACCCAGGTTGCAGCACACTC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCAATGTAATTGTAGCTaGAGTTTCAGGGCAACAGGG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMQCNCS*SFRATG
Trigger: CCCTGTTGCCCTGAAACTCCAGCTACAATTACATTG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTTGATTTCAGCCTTGTaGAACCCTGAGCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMLISAL*NPELRI
Trigger: GATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGTTTTCTCACCCAGCTTaGAGCCGCCCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEFSHPA*SRPHSP
Trigger: TGGAGAGTGCGGGCGGCTTCAAGCTGGGTGAGAAAA...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAGTGATTCAGTCTGGTaGATTTCTCCTGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESDSVW*ISPGSA
Trigger: AGCACTCCCAGGAGAAATTCACCAGACTGAATCACT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGCTCCATACCCAGCTTaGAGCCGCCCGCACTCTCCA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWAPYPA*SRPHSP
Trigger: TGGAGAGTGCGGGCGGCTTCAAGCTGGGTATGGAGC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEPAFRG*NSNENV
Trigger: CACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGATCTAGCTCAGTACTaGATCCTGTCTCATGAAGGA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIDLAQY*ILSHEG
Trigger: TCCTTCATGAGACAGGATTCAGTACTGAGCTAGATC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCTTGGTGTACCACATTaGCCATTATTGAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKLGVPH*PLLKKY
Trigger: GTACTTTTTCAATAATGGTCAATGTGGTACACCAAG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCAGTATTGTCACCTCTaGCTTGAGGCTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIQYCHL*LEAPKE
Trigger: TTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGTCATCTGCATCTGTGTaGTGCTTGGTTGTTATGCTA +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMSSASV*CLVVML
Trigger: TAGCATAACAACCAAGCATCACACAGATGCAGATGA...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCATTTTGCCAACACATTaGGGGTCCTTGGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIILPTH*GSLEAD
Trigger: ATCTGCTTCCAAGGACCCTCAATGTGTTGGCAAAAT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGCTTGCGTTCTTCTTaGTCCTTTTTGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRICLRSS*SFLAFS
Trigger: GGAGAAAGCCAAAAAGGAGCAAGAAGAACGCAAGCA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGATTCAAATGAGAACGTaGCCTGTAGTCCTAGCTACT +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMIQMRT*PVVLAT
Trigger: AGTAGCTAGGACTACAGGGCACGTTCTCATTTGAAT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGGAGTGTCCCTGGATTaGCCTAATGTTATCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEGVSLD*PNVICS
Trigger: TGAGCAGATAACATTAGGGCAATCCAGGGACACTCC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGAAGTCTCCTGGTCTaGTTTGCTGAGAATGGATTC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIRSLLV*FAENGF
Trigger: GAATCCATTCTCAGCAAAGCAGACCAGGAGACTTCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGTCTGAACAGCCCCCATaGACTCCTCAAGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELESEQPP*TPQVFY
Trigger: GTAGAAGACTTGAGGAGTCCATGGGGGCTGTTCAGA...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTCTCACCCAGGTGGCTaGGCTCGAATAAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLSHPGG*ARIRLP
Trigger: TGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATGTACTCTGGTAGCTaGATTTTGGCCAGTTTGCGG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEMYSGS*ILASLR
Trigger: CCGCAAACTGGCCAAAATCCAGCTACCAGAGTACAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGTTCAGTACTATCTGTaGTTTCAGGCATCTACTGGG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWVQYYL*FQASTG
Trigger: CCCAGTAGATGCCTGAAACCACAGATAGTACTGAAC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGAAGGAGGCACATTTTaGGGAGGGTTAATTTCATCA +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMEGGTF*GGLISS
Trigger: TGATGAAATTAACCCTCCCCAAAATGTGCCTCCTTC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTACTGGGGGCCCAGTGTaGAACGAGGCCAGGGAGCCC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCTGGPV*NEAREP
Trigger: GGGCTCCCTGGCCTCGTTCCACACTGGGCCCCCAGT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGGCTCCTAAAGAAGTaGTTAGACTTAGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIRLLKK*LDLACH
Trigger: GTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTTGATTTCAGCCTTGTaGAACCCTGAGCTGAGAATC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILISAL*NPELRI
Trigger: GATTCTCAGCTCAGGGTTCCACAAGGCTGAAATCAA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATCTGGTCTGCAGAAGGTaGAGGCAATGGATTAGATAT +
Preference number: 4 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDLVCRR*RQWIRY
Trigger: ATATCTAATCCATTGCCTCCACCTTCTGCAGACCAG...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCATGTGGATGCCACCCCTaGAAGAGTGCACAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPCGCHP*KSAQVE
Trigger: TTCCACCTGTGCACTCTTCCAGGGGTGGCATCCACA...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp CCCTCCATGAAAGCCACCTCTGACAGGTATAAGGACTaGCTAAAAGATTGCCGGGCCACACCTACAGACTTT +
Preference number: 4 (lower is better)
Translates to: PSMKATSDRYKD*LKDCRATPTDF
Trigger: AAAGTCTGTAGGTGTGGCCCGGCAATCTTTTAGCAAGTCCTTATACCTGTCAGAGGTGGCTTTCATGGAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp CTGCCTAGAGAGAGCCCTTCATTCTCGCTTCTTCACTaGGCTACCCCCATTCTCACTTCTTTCACTCTCACT +
Preference number: 4 (lower is better)
Translates to: LPRESPSFSLLH*ATPILTSFTLT
Trigger: AGTGAGAGTGAAAGAAGTGAGAATGGGGGTAGCCAAGTGAAGAAGCGAGAATGAAGGGCTCTCTCTAGGCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
3UTR CAA 72 bp TTTCCTTCAAAGGAGACTGTGATGTTGTTGATCTTCTaGGGCCGCACAGACTCTCCAGCGCGAATGGTGAAG +
Preference number: 4 (lower is better)
Translates to: FPSKETVMLLIF*GRTDSPARMVK
Trigger: CTTCACCATTCGCGCTGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACATCACAGTCTCCTTTGAAGGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATATCTAAGAGTTCGATaGTCTGTGGTCGGCACATCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEYLRVR*SVVGTS
Trigger: TGATGTGCCGACCACAGATCATCGAACTCTTAGATA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGGGCTGGAATAATGCCTaGTCCAGGTCAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEGWNNA*SRSIPE
Trigger: TTCAGGAATTGACCTGGATCAGGCATTATTCCAGCC...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGCAGTCAACAAATGGCTaGGCCAGGATTTTAACCCAG +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEQSTNG*ARILTQ
Trigger: CTGGGTTAAAATCCTGGCTCAGCCATTTGTTGACTG...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR TCA 90 bp GCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATGGCAGTCAACAAATGGCTaGGCCAGGATTTTAACCCAG +
Preference number: 4 (lower is better)
Translates to: ARILTQLPLSKRERSWRWQSTNG*ARILTQ
Trigger: CTGGGTTAAAATCCTGGCTCAGCCATTTGTTGACTG...CCATCTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR TCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTTTGCTTCATGCACATaGCATTATGTCAAACACTCG +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCFASCT*HYVKHS
Trigger: CGAGTGTTTGACATAATGTCATGTGCATGAAGCAAA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTCTGGGTTATCCACGATaGTGGAGAAGGTCACCATGT +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLLGYPR*WRRSPC
Trigger: ACATGGTGACCTTCTCCATCATCGTGGATAACCCAG...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGGTTACCACTAAAGGGTaGTCCCCTTCAGATAATAAA +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMVTTKG*SPSDNK
Trigger: TTTATTATCTGAAGGGGATCACCCTTTAGTGGTAAC...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGATCTAGCTCAGTACTaGATCCTGTCTCATGAAGGA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEDLAQY*ILSHEG
Trigger: TCCTTCATGAGACAGGATTCAGTACTGAGCTAGATC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTCCCTGCTCTCCTGCTaGATGCTATCCAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWSLLSC*MLSKAG
Trigger: CCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATGTGACCATTCCTGTTaGAACTCTTCTAGACTAGGG +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMECDHSC*NSSRLG
Trigger: CCCTAGTCTAGAAGAGTTTCAACAGGAATGGTCACA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGCCCTCTTTCAGCGTaGACAAGACTTGTAAATATG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRICPLSA*TRLVNM
Trigger: CATATTTACAAGTCTTGTTCACGCTGAAAGAGGGCA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATGCTTGCGTTCTTCTTaGTCCTTTTTGGCTTTCTCC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMECLRSS*SFLAFS
Trigger: GGAGAAAGCCAAAAAGGAGCAAGAAGAACGCAAGCA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTATGATAGGATCAGGATaGCCTTGGTCTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLMIGSG*PWSHPG
Trigger: ACCTGGGTGAGACCAAGGGCATCCTGATCCTATCAT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTTCATACTTTTCATTTaGTGTGAGGTTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWFILFI*CEVPGE
Trigger: CTCCCCAGGAACCTCACAGCAAATGAAAAGTATGAA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACCTAAAGGGAAGAAATaGACCCAATCTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEPKGKK*TQSQTS
Trigger: GCTGGTTTGAGATTGGGTGCATTTCTTCCCTTTAGG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAGAAGTCTCCTGGTCTaGTTTGCTGAGAATGGATTC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMERSLLV*FAENGF
Trigger: GAATCCATTCTCAGCAAAGCAGACCAGGAGACTTCT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCAGTTACAATTCATCTaGATCTGTGTGATGCTTGGT +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMQLQFI*ICVMLG
Trigger: ACCAAGCATCACACAGATGCAGATGAATTGTAACTG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGTTCTGTAACCACCTTTaGACTCAGGGGTGGCAAAAC +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEFCNHL*TQGWQN
Trigger: GTTTTGCCACCCCTGAGTCCAAAGGTGGTTACAGAA...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGGAGTTCGATGATCTGTaGTCGGCACATCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEEFDDL*SAHQTC
Trigger: ACACGTTTGATGTGCCGACCACAGATCATCGAACTC...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAACTTTCACCAACCTTaGAATTTTGTCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKNFHQP*NFVIVP
Trigger: AGGAACAATGACAAAATTCCAAGGTTGGTGAAAGTT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCATCCTTGTTCTCCTCTaGAGTAAAGAGGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIILVLL*SKEDSE
Trigger: TTCCGAATCCTCTTTACTCCAGAGGAGAACAAGGAT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGAGGAAATACCACTTTTaGGTCTTGGCAAATGTATGG +
Preference number: 4 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMRKYHF*VLANVW
Trigger: CCATACATTTGCCAAGACCCAAAAGTGGTATTTCCT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTCTCACTTCTTTACTTaGTTACCTCCTATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMSHFFT*LPPICP
Trigger: AGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATCGAGAAGGGACCTTaGGGCTTGGGAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWIEKGP*GLGGRA
Trigger: GGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGCGAATGGTGAAGGCTaGGTTATCCACGATGATGGA +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLANGEG*VIHDDG
Trigger: TCCATCATCGTGGATAACCCAGCCTTCACCATTCGC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTTATGGCTGTGGGTTTaGCAAATGTCAAGTTTTGCC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLWLWV*QMSSFA
Trigger: GGCAAAACTTGACATTTGCCAAACCCACAGCCATAA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCATCCCATGTCCACACTTaGCCTGGAACAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPSHVHT*PGTNGA
Trigger: GGCTCCATTTGTTCCAGGCCAAGTGTGGACATGGGA...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCATGGGGTGACACAATGTaGTCTGGTCTGCAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPWGDTM*SGLQKV
Trigger: CACCTTCTGCAGACCAGACCACATTGTGTCACCCCA...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp AGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCTATTGGCATGAGCCTGTaGATGCCACCCCTGGAAGAG +
Preference number: 4 (lower is better)
Translates to: RMKMIVLHGLRSMRNAIPIGMSL*MPPLEE
Trigger: CTCTTCCAGGGGTGGCATCCACAGGCTCATGCCAAT...AGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGATCCAGGTCAATTCCTaGAAACTTCTGATGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWIQVNS*KLLMCC
Trigger: ACAACACATCAGAAGTTTTCAGGAATTGACCTGGAT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGAGGCTGGAATAATGCCTaGTCCAGGTCAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGGWNNA*SRSIPE
Trigger: TTCAGGAATTGACCTGGATCAGGCATTATTCCAGCC...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGACAGTCAACAAATGGCTaGGCCAGGATTTTAACCCAG +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGQSTNG*ARILTQ
Trigger: CTGGGTTAAAATCCTGGCTCAGCCATTTGTTGACTG...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR TCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTG +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLPAFRG*NSNENV
Trigger: CACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGG...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCTCCAGCGCGAATGGTaGAGGCTGGGTTATCCACGA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWLQREW*RLGYPR
Trigger: TCGTGGATAACCCAGCCTTCACCATTCGCGCTGGAG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGTTACCACTAAAGGGTaGTCCCCTTCAGATAATAAA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWVTTKG*SPSDNK
Trigger: TTTATTATCTGAAGGGGATCACCCTTTAGTGGTAAC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATCATCTGCATCTGTGTaGTGCTTGGTTGTTATGCTA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESSASV*CLVVML
Trigger: TAGCATAACAACCAAGCATCACACAGATGCAGATGA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATATGGAATACAAAATATaGCTTCTCTCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDMEYKI*LLSVSP
Trigger: GGGAGAGACAGAGAGAAGTCATATTTTGTATTCCAT...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR GCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGACATCAAACGTGTTTTTaGCAGTCTCTGCTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGHQTCF*QSLLGG
Trigger: ACCACCGAGCAGAGACTGGCAAAAACACGTTTGATG...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR GCA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTTGACTCTCTTGATCTaGTTTAAATACCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMLTLLI*FKYPFA
Trigger: AGCAAAGGGGTATTTAAAGCAGATCAAGAGAGTCAA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGTCCCATTTAAACCTTaGACCCACATCGCCTGTGTT +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLVPFKP*THIACV
Trigger: AACACAGGCGATGTGGGTGCAAGGTTTAAATGGGAC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTATTAATGAGTTTTTCTaGGTGGAAGTCTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: ASLASWGCINEFFCVEVCINEFF*VEVCTV
Trigger: GACTGTACAGACTTCCACGCAGAAAAACTCATTAAT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp AGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCTCAATGTGGTCTGGTCTaGAGAAGGTGGAGGCAATGG +
Preference number: 4 (lower is better)
Translates to: RMKMIVLHGLRSMRNAIPQCGLV*RRWRQW
Trigger: CCATTGCCTCCACCTTCTGCAGACCAGACCACATTG...AGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR GCA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCAAACCAATATGCACACTaGCTCCCAGGAATCCAGGGA +
Preference number: 4 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPNQYAH*LPGIQG
Trigger: TCCCTGGATTCCTGGGAGGCAGTGTGCATATTGGTT...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGTCTCTGCTCGGTaGTCAGGGACATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEPVSAR*SGTFPS
Trigger: TGAAGGAAATGTCCCTGACCACCGAGCAGAGACTGG...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGAGAGTTCGATGATCTGTaGTCGGCACATCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGEFDDL*SAHQTC
Trigger: ACACGTTTGATGTGCCGACCACAGATCATCGAACTC...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGAGCCACTTTGTaGCCAATATCTTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEPGATL*PISLGL
Trigger: CAGCCCCAAAGATATTGGCCACAAAGTGGCTCCTGG...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTCCAGGAGCCACTTTGTaGCCAATATCTTTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFPGATL*PISLGL
Trigger: CAGCCCCAAAGATATTGGCCACAAAGTGGCTCCTGG...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAGGAAATACCACTTTTaGGTCTTGGCAAATGTATGG +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIRKYHF*VLANVW
Trigger: CCATACATTTGCCAAGACCCAAAAGTGGTATTTCCT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGGTTTTGCTGCCAGATaGGTTTCCTTCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLGFAAR*VSFKGD
Trigger: GTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAAAGAGTTATGGCTGTaGGTTTGGCAAATGTCAAGT +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIKELWL*VWQMSS
Trigger: ACTTGACATTTGCCAAACCCACAGCCATAACTCTTT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGTAATGAAAGAGTTATaGCTGTGGGTTTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWVMKEL*LWVWQM
Trigger: CATTTGCCAAACCCACAGCCATAACTCTTTCATTAC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTAGAAACCTCCATGCCTaGGGTAATATAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLRNLHA*GNIAFF
Trigger: GAAGAAGGCTATATTACCTCAGGCATGGAGGTTTCT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTTATTACAAAGTACTTaGGCTTTGGGGCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLLQST*ALGLCQ
Trigger: TTGACATAGCCCCAAAGCTCAAGTACTTTGTAATAA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTCCCTGCTCTCCTGCTaGATGCTATCCAAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSLLSC*MLSKAG
Trigger: CCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCTTGGTGTACCACATTaGCCATTATTGAAAAAGTAC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRILGVPH*PLLKKY
Trigger: GTACTTTTTCAATAATGGTCAATGTGGTACACCAAG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGATTGTACCAAAATCTTaGACTGTGCAAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWIVPKS*TVQSSF
Trigger: GAAACTGCTTTGCACAGTTCAAGATTTTGGTACAAT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAGATTAGAAGAAATTTaGACTGGAAGAGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWRLEEI*TGRETL
Trigger: GAGAGTCTCTCTTCCAGTTCAAATTTCTTCTAATCT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTGTCCTTGTATGTGTTaGACATGTTGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLCPCMC*TCCSLC
Trigger: GCAGAGAGAGCAACATGTGCAACACATACAAGGACA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGAAGAGGGTGCCCTGGTaGTTGCGGTTCTCCAAGTTC +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLKRVPW*LRFSKF
Trigger: GAACTTGGAGAACCGCAAGCACCAGGGCACCCTCTT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCGGGGGAAGAAGAGGGTaGCCTGGTGCTTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLGGRRG*PGACGS
Trigger: AGAACCGCAAGCACCAGGGCACCCTCTTCTTCCCCC...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGGGGAAGAAGAGGGTaGCCTGGTGCTTGCGGTTCT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGGRRG*PGACGS
Trigger: AGAACCGCAAGCACCAGGGCACCCTCTTCTTCCCCC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATTTTAAAAAGAAACTaGAGTACCCAGCGTCACGCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEILKRN*STQRHA
Trigger: TGCGTGACGCTGGGTACTGCAGTTTCTTTTTAAAAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTGCTCTCCTGCTGAATaGTATCCAAGGCGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWCSPAE*YPRRGV
Trigger: CACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGCAAAATCTTGAACTGTaGAAAGCAGTTTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWQNLEL*KAVSPT
Trigger: TGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTG...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCAAAATCTTGAACTGTaGAAAGCAGTTTCTCCAACA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIQNLEL*KAVSPT
Trigger: TGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACAAAGGAATGAATTTTaGCAACACATTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEQRNEF*QHIEGP
Trigger: AGGACCCTCAATGTGTTGGCAAAATTCATTCCTTTG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTTCTGAACAGCCCCCATaGACTCCTCAAGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFSEQPP*TPQVFY
Trigger: GTAGAAGACTTGAGGAGTCCATGGGGGCTGTTCAGA...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGTTCCTCAAAATCAGTaGAACTTCATAGACTTCACA +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIVPQNQ*NFIDFT
Trigger: TGTGAAGTCTATGAAGTTCCACTGATTTTGAGGAAC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATCCTTGTTCTCCTCTaGAGTAAAGAGGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEILVLL*SKEDSE
Trigger: TTCCGAATCCTCTTTACTCCAGAGGAGAACAAGGAT...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGGACACAGTCAACAAATaGCTGAGCCAGGATTTTAAC +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEDTVNK*LSQDFN
Trigger: GTTAAAATCCTGGCTCAGCCATTTGTTGACTGTGTC...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCGCTTCAGTGCCTCCCTaGCCTCCTGGGGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLASVPP*PPGAAL
Trigger: TAATGCAGCCCCAGGAGGCCAGGGAGGCACTGAAGC...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGCTTCAGTGCCTCCCTaGCCTCCTGGGGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTASVPP*PPGAAL
Trigger: TAATGCAGCCCCAGGAGGCCAGGGAGGCACTGAAGC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGGATCAGGATGCCCTTaGTCTCACCCAGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTGSGCP*SHPGGW
Trigger: CCAGCCACCTGGGTGAGACCAAGGGCATCCTGATCC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCATCGAGAAGGGACCTTaGGGCTTGGGAGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLIEKGP*GLGGRA
Trigger: GGCTCTGCCTCCCAAGCCCCAAGGTCCCTTCTCGAT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACACCCAGGGTGGAGGTaGCCCATCTGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTHPGWR*PICGEK
Trigger: TTTCTCCCCACAGATGGGCCACCTCCACCCTGGGTG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCACCCAGGGTGGAGGTaGCCCATCTGTGGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCHPGWR*PICGEK
Trigger: TTTCTCCCCACAGATGGGCCACCTCCACCCTGGGTG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAAAGTACTTGAGCTTTaGGGCTATGTCAAGAAACTC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEKVLEL*GYVKKL
Trigger: GAGTTTCTTGACATAGCCCCAAAGCTCAAGTACTTT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACTTGTAGGAGGGCTGTaGGGGATGAGTGTGGGGAGC +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLVGGL*GMSVGS
Trigger: GCTCCCCACACTCATCCCCCACAGCCCTCCTACAAG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGGTCCTAGAGTATACTaGGCTAGGGTTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWGPRVY*ARVVGR
Trigger: CCTCCCCACAACCCTAGCCCAGTATACTCTAGGACC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGGCTTGGGGAAGCACTaGAACAGGTCTGAAGTTGGG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWGLGKH*NRSEVG
Trigger: CCCAACTTCAGACCTGTTCCAGTGCTTCCCCAAGCC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTCCACAAGCATGTGTTaGAAGGGTTATTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWSTSMC*KGYFHQ
Trigger: TTGATGAAAATAACCCTTCCAACACATGCTTGTGGA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCCTGAAATTATATTCTaGCTCAGGTTGCTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIPEIIF*LRLLSN
Trigger: GTTACTTAGCAACCTGAGCCAGAATATAATTTCAGG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCTGTCCACACTTGGCCTaGAACAAATGGAGCCATCCA +
Preference number: 4 (lower is better)
Translates to: LRMKMIVLHGLRSMRNAICPHLA*NKWSHP
Trigger: TGGATGGCTCCATTTGTTCCAGGCCAAGTGTGGACA...GATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp CTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCAACATGAATTCCCATGTCCACACTTaGCCTGGAACAAATGGAGCC +
Preference number: 4 (lower is better)
Translates to: LVCRRWRQWIRYTHSNMNSHVHT*PGTNGA
Trigger: GGCTCCATTTGTTCCAGGCCAAGTGTGGACATGGGA...ATTCATGTTGCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp GAGGGTGAAGGGCTGAAAAACCAGGTGACTGATTGGTaGGGTAAGACGGATGAAATCATCAGGATGTGGAAA +
Preference number: 4 (lower is better)
Translates to: EGEGLKNQVTDW*GKTDEIIRMWK
Trigger: TTTCCACATCCTGATGATTTCATCCGTCTTACCCAACCAATCAGTCACCTGGTTTTTCAGCCCTTCACCCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp GGCCCTCACCAATGTTACAGTATTGTCACCTCTGACTaGAGGCTCCTAAAGAAGTGGTTAGACTTAGCATGC +
Preference number: 4 (lower is better)
Translates to: GPHQCYSIVTSD*RLLKKWLDLAC
Trigger: GCATGCTAAGTCTAACCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTGTAACATTGGTGAGGGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGTTCCTTCAGGAACTCTaGGGGTGTAAGCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEFLQEL*GCKHSV
Trigger: AACCGAATGCTTACACCCTCAGAGTTCCTGAAGGAA...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTTTCCTTCAGGAACTCTaGGGGTGTAAGCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFFLQEL*GCKHSV
Trigger: AACCGAATGCTTACACCCTCAGAGTTCCTGAAGGAA...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATTCCTGAAAACTTCTaGTGTGTTGTTTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEIPENF*CVVSPI
Trigger: TATGGGGGAAACAACACATCAGAAGTTTTCAGGAAT...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATCCAGGTCAATTCCTaGAAACTTCTGATGTGTTGT +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEIQVNS*KLLMCC
Trigger: ACAACACATCAGAAGTTTTCAGGAATTGACCTGGAT...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGGAACATATCAAGGTATaGGGAAACCCAAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEEHIKV*GNPKET
Trigger: TGTTTCCTTTGGGTTTCCTCATACCTTGATATGTTC...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCAGTCAGCTTGGTGGTaGTGGGGGTTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCQSAWW*WGFCCQ
Trigger: CTGGCAGCAAAACCCCCATCACCACCAAGCTGACTG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCAGTCAGCTTGGTGGTaGTGGGGGTTTTGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLQSAWW*WGFCCQ
Trigger: CTGGCAGCAAAACCCCCATCACCACCAAGCTGACTG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAGATTAGAAGAAATTTaGACTGGAAGAGAGACTCTC +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMERLEEI*TGRETL
Trigger: GAGAGTCTCTCTTCCAGTTCAAATTTCTTCTAATCT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CTGAGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCCAGATCACATAGCTaGAAGATAGCCTGGACTTCA +
Preference number: 4 (lower is better)
Translates to: LRMKMIVLHGLRSMRNAIPRSHS*KIAWTS
Trigger: TGAAGTCCAGGCTATCTTTCAGCTATGTGATCTGGG...GATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR GCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTCATCAAACGTGTTTTTaGCAGTCTCTGCTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFHQTCF*QSLLGG
Trigger: ACCACCGAGCAGAGACTGGCAAAAACACGTTTGATG...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR GCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTCCTCATCAGCAGTACTaGAATGACTGTAGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFPHQQY*NDCSLV
Trigger: GACCAAGCTACAGTCATTGCAGTACTGCTGATGAGG...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR GCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAACTGATGTGCCTGACTaGATACTAGTCATTATTTCA +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMETDVPD*ILVIIS
Trigger: TGAAATAATGACTAGTATGCAGTCAGGCACATCAGT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGAATCCTTGTTCTCCTCTaGAGTAAAGAGGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGILVLL*SKEDSE
Trigger: TTCCGAATCCTCTTTACTCCAGAGGAGAACAAGGAT...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGAGACACAGTCAACAAATaGCTGAGCCAGGATTTTAAC +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGDTVNK*LSQDFN
Trigger: GTTAAAATCCTGGCTCAGCCATTTGTTGACTGTGTC...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGGCAGGTTGGGAATCTaGCAGAAAAGGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWGRLGI*QKRLLS
Trigger: CGAGAGCAACCTTTTCTGCCAGATTCCCAACCTGCC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGGCAGGTTGGGAATCTaGCAGAAAAGGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLGRLGI*QKRLLS
Trigger: CGAGAGCAACCTTTTCTGCCAGATTCCCAACCTGCC...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGCTCCAGGTGGCAGGTTaGGAATCTGGCAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLLQVAG*ESGRKG
Trigger: ACCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAG...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGATAAATGTTGGACCATaGCTGATCTTGATTATGAGT +
Preference number: 4 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWINVGP*LILIMS
Trigger: ACTCATAATCAAGATCAGCCATGGTCCAACATTTAT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGATGACCCGGAATCTCTaGGGCTTGTTCAGCCAGTTG +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLMTRNL*GLFSQL
Trigger: CAACTGGCTGAACAAGCCCCAGAGATTCCGGGTCAT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGCTTCAGTGCCTCCCTaGCCTCCTGGGGCTGCATTA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYASVPP*PPGAAL
Trigger: TAATGCAGCCCCAGGAGGCCAGGGAGGCACTGAAGC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGATAAGACTTCCACACTaGCTTCAGTGCCTCCCTGGC +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLIRLPH*LQCLPG
Trigger: GCCAGGGAGGCACTGAAGCCAGTGTGGAAGTCTTAT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTCTCACCCAGGTGGCTaGGCTCGAATAAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLSHPGG*ARIRLP
Trigger: TGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGACAGCTTCAGTGGCTTaGGGAAGCACTGGAACAGGT +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWTASVA*GSTGTG
Trigger: ACCTGTTCCAGTGCTTCCCCAAGCCACTGAAGCTGT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGCATGCCACACTCACTaGGGGCCCAGTGTGGAACGA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYACHTH*GPSVER
Trigger: TCGTTCCACACTGGGCCCCCAGTGAGTGTGGCATGC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TACAGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTTGTGGATGCCACCCCTaGAAGAGTGCACAGGTGGAA +
Preference number: 4 (lower is better)
Translates to: YRLRHTKILTVVSLVGRICGCHP*KSAQVE
Trigger: TTCCACCTGTGCACTCTTCCAGGGGTGGCATCCACA...AATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCTGTA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp ACGGATGAAATCATCAGGATGTGGAAACCGCATTCTTaGGTGAATCAGCTTCTCGTGAGGTCCTTCAGATCA +
Preference number: 4 (lower is better)
Translates to: TDEIIRMWKPHS*VNQLLVRSFRS
Trigger: TGATCTGAAGGACCTCACGAGAAGCTGATTCACCAAAGAATGCGGTTTCCACATCCTGATGATTTCATCCGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGTATCTAAGAGTTCGATaGTCTGTGGTCGGCACATCA +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEYLRVR*SVVGTS
Trigger: TGATGTGCCGACCACAGATCATCGAACTCTTAGATA...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTTATCTAAGAGTTCGATaGTCTGTGGTCGGCACATCA +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFYLRVR*SVVGTS
Trigger: TGATGTGCCGACCACAGATCATCGAACTCTTAGATA...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGAATTCCTGAAAACTTCTaGTGTGTTGTTTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGIPENF*CVVSPI
Trigger: TATGGGGGAAACAACACATCAGAAGTTTTCAGGAAT...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTTCCAAAGAGGGGGATaGTATACTCTCCACCTGCGA +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLFQRGG*YTLHLR
Trigger: TCGCAGGTGGAGAGTATATCATCCCCCTCTTTGGAA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCTGGGTTATCCACGATaGTGGAGAAGGTCACCATGT +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWLGYPR*WRRSPC
Trigger: ACATGGTGACCTTCTCCATCATCGTGGATAACCCAG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGATGTGCAGATGGGTTaGGAATCCCTGCTCTCCTGC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCDVQMG*ESLLSC
Trigger: GCAGGAGAGCAGGGATTCTCAACCCATCTGCACATC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGGCAGAATTCTAGGATaGCCTCCAATATTCCCACCC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWGRILG*PPIFPP
Trigger: GGGTGGGAATATTGGAGGTCATCCTAGAATTCTGCC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATTTTGCCAGCCTCTCCTaGTCCCTCTTCTTCCGCTCG +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYFASLS*SLFFRS
Trigger: CGAGCGGAAGAAGAGGGAGCAGGAGAGGCTGGCAAA...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCTGGATTCCTGTCTGTaGAGCAAGAGCCGGTCAAAA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWLDSCL*SKSRSK
Trigger: TTTTGACCGGCTCTTGCTGCACAGACAGGAATCCAG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGAGGCTTTTCCGGAAGTaGTGGCGTGGCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLRLFRK*WRGFQI
Trigger: TATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGCTGGCTATAAGCCATaGTGGGGCTGGTGGCATGTT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCAGYKP*WGWWHV
Trigger: AACATGCCACCAGCCCCAGCATGGCTTATAGCCAGC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGCAGTAACAGACCAATaGACAGAGACAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWAVTDQ*TETVGM
Trigger: CATCCCCACTGTCTCTGTGCATTGGTCTGTTACTGC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCAAGGCCCAGACCAATaGCTACCTTTAGGTCAGAAG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWQGPDQ*LPLGQK
Trigger: CTTCTGACCTAAAGGTAGGCATTGGTCTGGGCCTTG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGGTTCCTCAAAATCAGTaGAACTTCATAGACTTCACA +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELEVPQNQ*NFIDFT
Trigger: TGTGAAGTCTATGAAGTTCCACTGATTTTGAGGAAC...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAACTTTCACCAACCTTaGAATTTTGTCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LWNPELRIQFTLGSQPMENFHQP*NFVIVP
Trigger: AGGAACAATGACAAAATTCCAAGGTTGGTGAAAGTT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTATCAATTGGGAACCTaGACAGTGGTGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWYQLGT*TVVGSS
Trigger: GCTGGATCCCACCACTGTCCAGGTTCCCAATTGATA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTAATATAGCCTTCTTCTaGGCTAATGGAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLNIAFF*ANGEMR
Trigger: CCTCATTTCTCCATTAGCCCAGAAGAAGGCTATATT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCAAGAAGAGGGTGCCCTaGTGCTTGCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLKKRVP*CLRFSK
Trigger: CTTGGAGAACCGCAAGCACCAGGGCACCCTCTTCTT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAAGAAGAGGGTGCCCTaGTGCTTGCGGTTCTCCAAG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCKKRVP*CLRFSK
Trigger: CTTGGAGAACCGCAAGCACCAGGGCACCCTCTTCTT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGCGAATGGTGAAGGCTaGGTTATCCACGATGATGGA +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLANGEG*VIHDDG
Trigger: TCCATCATCGTGGATAACCCAGCCTTCACCATTCGC...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGCGAATGGTGAAGGCTaGGTTATCCACGATGATGGA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWANGEG*VIHDDG
Trigger: TCCATCATCGTGGATAACCCAGCCTTCACCATTCGC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACTGGTAGCTGGATTTTaGCCAGTTTGCGGCGACTCC +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLVAGF*PVCGDS
Trigger: GGAGTCGCCGCAAACTGGCCAAAATCCAGCTACCAG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGTCCTAGAGTATACTaGGCTAGGGTTGTGGGGAGG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGPRVY*ARVVGR
Trigger: CCTCCCCACAACCCTAGCCCAGTATACTCTAGGACC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCAACAGGAGTGGGGTGTaGGGATGTAAGAGAATAAAT +
Preference number: 4 (lower is better)
Translates to: QCGLVCRRWRQWIRYTHSNRSGV*GCKRIN
Trigger: ATTTATTCTCTTACATCCCCACACCCCACTCCTGTT...GCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp AGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCTCTGGTCTGCAGAAGGTaGAGGCAATGGATTAGATAT +
Preference number: 4 (lower is better)
Translates to: RMKMIVLHGLRSMRNAIPLVCRR*RQWIRY
Trigger: ATATCTAATCCATTGCCTCCACCTTCTGCAGACCAG...AGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGACTTTTCATTTGCTGTaGGGTTCCTGGGGAGATCGA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWTFHLL*GSWGDR
Trigger: TCGATCTCCCCAGGAACCTCACAGCAAATGAAAAGT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAAAGAGTCTCCCTCCATaGAAGCCACCTCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTKSLPP*KPPLTG
Trigger: ACCTGTCAGAGGTGGCTTTCATGGAGGGAGACTCTT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATGATCAAAGGTCACTaGGTGATGAGATGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWMIKGH*VMRWEE
Trigger: CTCCTCCCATCTCATCACTCAGTGACCTTTGATCAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGAAACAGGGACGCAATaGGTAAAGGGCAAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWETGTQ*VKGKSR
Trigger: CCTACTTTTGCCCTTTACTCATTGCGTCCCTGTTTC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp CAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCATGGAATACAAAATATaGCTTCTCTCTGTCTCTCCC +
Preference number: 4 (lower is better)
Translates to: QCGLVCRRWRQWIRYTHSMEYKI*LLSVSP
Trigger: GGGAGAGACAGAGAGAAGTCATATTTTGTATTCCAT...GCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR TCA 90 bp AGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCTGACATACCAAAATATTaGCTGTGGTTTCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: RMKMIVLHGLRSMRNAIPDIPKY*LWFPWL
Trigger: CAACCAGGGAAACCACAGTCAATATTTTGGTATGTC...AGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR GCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTTGACTCTCTTGATCTaGTTTAAATACCCCTTTGCT +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLLTLLI*FKYPFA
Trigger: AGCAAAGGGGTATTTAAAGCAGATCAAGAGAGTCAA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGACATGTTGCTCTCTCTaGCTAGAGAGAGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLTCCSL*LERALH
Trigger: ATGAAGGGCTCTCTCTAGGCAGAGAGAGCAACATGT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACAGCTGCAATGTGCATaGAAATCGCCTGGAGGTCCA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTQLQCA*KSPGGP
Trigger: TGGACCTCCAGGCGATTTGCATGCACATTGCAGCTG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATGCTCCTTGGAGTTCTaGCACACAGCTACCCTGACA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTCSLEF*HTATLT
Trigger: TGTCAGGGTAGCTGTGTGGCAGAACTCCAAGGAGCA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATTGGTTAGACTTAGCATaGCACACTCACTGGGGGCCC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYWLDLA*HTHWGP
Trigger: GGGCCCCCAGTGAGTGTGGCATGCTAAGTCTAACCA...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGAACTTTCACCAACCTTaGAATTTTGTCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: LSQDFNPAASLKKREELENFHQP*NFVIVP
Trigger: AGGAACAATGACAAAATTCCAAGGTTGGTGAAAGTT...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGGACACAGTCAACAAATaGCTGAGCCAGGATTTTAAC +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEDTVNK*LSQDFN
Trigger: GTTAAAATCCTGGCTCAGCCATTTGTTGACTGTGTC...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGCAGGTTGGGAATCTaGCAGAAAAGGTTGCTCTCG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGRLGI*QKRLLS
Trigger: CGAGAGCAACCTTTTCTGCCAGATTCCCAACCTGCC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCTCCAGGTGGCAGGTTaGGAATCTGGCAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLLQVAG*ESGRKG
Trigger: ACCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCTCCAGGTGGCAGGTTaGGAATCTGGCAGAAAAGGT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCLQVAG*ESGRKG
Trigger: ACCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACCGGAAGTGCTGGCGTaGCTTTCAGATAGAGCTCAT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTPEVLA*LSDRAH
Trigger: ATGAGCTCTATCTGAAAGCCACGCCAGCACTTCCGG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATCTCACCCAGGTGGCTaGGCTCGAATAAGACTTCCA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTSHPGG*ARIRLP
Trigger: TGGAAGTCTTATTCGAGCCCAGCCACCTGGGTGAGA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATTGGTCTCACCCAGGTaGCTGGGCTCGAATAAGACT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLVSPR*LGSNKT
Trigger: AGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGGTTTTGCTGCCAGATaGGTTTCCTTCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLGFAAR*VSFKGD
Trigger: GTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACC...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGGTTTTGCTGCCAGATaGGTTTCCTTCAAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWGFAAR*VSFKGD
Trigger: GTCTCCTTTGAAGGAAACCCATCTGGCAGCAAAACC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAGGTGGCCCATCTGTaGGGAGAAAGCAATTGTAGC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCEVAHL*GESNCS
Trigger: GCTACAATTGCTTTCTCCCCACAGATGGGCCACCTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTACTGGGCTAGGGTTGTaGGGAGGTACAGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCTGLGL*GGTEEG
Trigger: TCCTTCTTCTGTACCTCCCCACAACCCTAGCCCAGT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGAGTGTGCTGCAACCTaGGTTCGTTTTTGTTTCTCC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWECAAT*VRFCFS
Trigger: GGAGAAACAAAAACGAACCCAGGTTGCAGCACACTC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCTAACAGGAGTGGGGTGTaGGGATGTAAGAGAATAAAT +
Preference number: 4 (lower is better)
Translates to: RMKMIVLHGLRSMRNAIPNRSGV*GCKRIN
Trigger: ATTTATTCTCTTACATCCCCACACCCCACTCCTGTT...AGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGATGCACAGGTGGAATGTaGGGTGACACAATGTGGTCT +
Preference number: 4 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRCTGGM*GDTMWS
Trigger: AGACCACATTGTGTCACCCCACATTCCACCTGTGCA...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR TCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTATCCAGGTCAATTCCTaGAAACTTCTGATGTGTTGT +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFIQVNS*KLLMCC
Trigger: ACAACACATCAGAAGTTTTCAGGAATTGACCTGGAT...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTGAACATATCAAGGTATaGGGAAACCCAAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFEHIKV*GNPKET
Trigger: TGTTTCCTTTGGGTTTCCTCATACCTTGATATGTTC...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR TCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCTGGGTTATCCACGATaGTGGAGAAGGTCACCATGT +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLLGYPR*WRRSPC
Trigger: ACATGGTGACCTTCTCCATCATCGTGGATAACCCAG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGGCTGAAATTCAAATaGGAACGTGCCCTCGGAGTT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGLKFK*ERALGV
Trigger: AACTCCGAGGGCACGTTCTCATTTGAATTTCAGCCC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAAGAGTCTCCCTCCATaGAAGCCACCTCTGACAGGT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYKSLPP*KPPLTG
Trigger: ACCTGTCAGAGGTGGCTTTCATGGAGGGAGACTCTT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGATGTGTTGCACATGTTaGTCTCTCTGCCTAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLMCCTC*SLCLER
Trigger: TCTCTCTAGGCAGAGAGAGCAACATGTGCAACACAT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTGTCCTTGTATGTGTTaGACATGTTGCTCTCTCTGC +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLCPCMC*TCCSLC
Trigger: GCAGAGAGAGCAACATGTGCAACACATACAAGGACA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCTGGCCTCCTGGGGCTaGATTAATGAGTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLLASWG*INEFFC
Trigger: GCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCTGGCCTCCTGGGGCTaGATTAATGAGTTTTTCTGC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCLASWG*INEFFC
Trigger: GCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTATGATAGGATCAGGATaGCCTTGGTCTCACCCAGGT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCMIGSG*PWSHPG
Trigger: ACCTGGGTGAGACCAAGGGCATCCTGATCCTATCAT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTATTCAAATGAGAACGTaGCCTCGGAGTTGGCAGGCA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCIQMRT*PRSWQA
Trigger: TGCCTGCCAACTCCGAGGGCACGTTCTCATTTGAAT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGCAGTAACAGACCAATaGACAGAGACAGTGGGGATG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCAVTDQ*TETVGM
Trigger: CATCCCCACTGTCTCTGTGCATTGGTCTGTTACTGC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGTATTCTGTGCACAGTaGTCCTTGGAGTTCTGCCAC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCVFCAQ*SLEFCH
Trigger: GTGGCAGAACTCCAAGGAGCACTGTGCACAGAATAC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTCTGAACAGCCCCCATaGACTCCTCAAGTCTTCTAC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSEQPP*TPQVFY
Trigger: GTAGAAGACTTGAGGAGTCCATGGGGGCTGTTCAGA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCCAGTCTCTGCTCGGTaGTCAGGGACATTTCCTTCA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYPVSAR*SGTFPS
Trigger: TGAAGGAAATGTCCCTGACCACCGAGCAGAGACTGG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTATCAATTGGGAACCTaGACAGTGGTGGGATCCAGC +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLYQLGT*TVVGSS
Trigger: GCTGGATCCCACCACTGTCCAGGTTCCCAATTGATA...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTATAAATGTTGGACCATaGCTGATCTTGATTATGAGT +
Preference number: 4 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLINVGP*LILIMS
Trigger: ACTCATAATCAAGATCAGCCATGGTCCAACATTTAT...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCTTTTCCGGAAGTGCTaGCGTGGCTTTCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLLFRKC*RGFQIE
Trigger: CTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATGAGTTTTTCTGCGTaGAAGTCTGTACAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWMSFSA*KSVQSV
Trigger: GACCGACTGTACAGACTTCCACGCAGAAAAACTCAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATTTGGTCTCACCCAGGTaGCTGGGCTCGAATAAGACT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYLVSPR*LGSNKT
Trigger: AGTCTTATTCGAGCCCAGCCACCTGGGTGAGACCAA...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTCCTGATGTGCAGATaGGTTGAGAATCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVLMCR*VENPCS
Trigger: AGAGCAGGGATTCTCAACCCATCTGCACATCAGGAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATACTGGGCTAGGGTTGTaGGGAGGTACAGAAGAAGGA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYTGLGL*GGTEEG
Trigger: TCCTTCTTCTGTACCTCCCCACAACCCTAGCCCAGT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTGGCCCCAAAGCACATaGGTAGTGATGCTGGCATAT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCWPQST*VVMLAY
Trigger: ATATGCCAGCATCACTACCCATGTGCTTTGGGGCCA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACCATGCTGGGGCTGGTaGCATGTTAGACAAGATTTC +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTPCWGW*HVRQDF
Trigger: GAAATCTTGTCTAACATGCCACCAGCCCCAGCATGG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAAGCCATGCTGGGGCTaGTGGCATGTTAGACAAGAT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCKPCWG*WHVRQD
Trigger: ATCTTGTCTAACATGCCACCAGCCCCAGCATGGCTT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGTGCACAGTGCTCCTTaGAGTTCTGCCACACAGCTA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYVHSAP*SSATQL
Trigger: TAGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCAC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGAGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCAGAAGGTGGAGGCAATaGATTAGATATACACATAGC +
Preference number: 4 (lower is better)
Translates to: LRMKMIVLHGLRSMRNAIRRWRQ*IRYTHS
Trigger: GCTATGTGTATATCTAATCCATTGCCTCCACCTTCT...GATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCTCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp GAATGGATTCTCCAATGTAACTTCCACAAGCATGTGTaGGAAGGGTTATTTTCATCAAGCCTGCTGTTAAGC +
Preference number: 4 (lower is better)
Translates to: EWILQCNFHKHV*EGLFSSSLLLS
Trigger: GCTTAACAGCAGGCTTGATGAAAATAACCCTTCCAACACATGCTTGTGGAAGTTACATTGGAGAATCCATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTTCCTTCAGGAACTCTaGGGGTGTAAGCATTCGGTT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCFLQEL*GCKHSV
Trigger: AACCGAATGCTTACACCCTCAGAGTTCCTGAAGGAA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGCTGGAATAATGCCTaGTCCAGGTCAATTCCTGAA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGWNNA*SRSIPE
Trigger: TTCAGGAATTGACCTGGATCAGGCATTATTCCAGCC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAGTGATTCAGTCTGGTaGATTTCTCCTGGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSDSVW*ISPGSA
Trigger: AGCACTCCCAGGAGAAATTCACCAGACTGAATCACT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCTGGTCTGCTCCTCTTaGGCCTTTGTAGTGTTTGTG +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYLVCSS*AFVVFV
Trigger: CACAAACACTACAAAGGCTCAAGAGGAGCAGACCAG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAAGCCAAGAGAAAAAGTaGTGGGAGTGTCCCTGGATT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTSQEKK*WECPWI
Trigger: AATCCAGGGACACTCCCATCACTTTTTCTCTTGGCT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTGCCCTCTTTCAGCGTaGACAAGACTTGTAAATATG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWCPLSA*TRLVNM
Trigger: CATATTTACAAGTCTTGTTCACGCTGAAAGAGGGCA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCATCAAACGTGTTTTTaGCAGTCTCTGCTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCHQTCF*QSLLGG
Trigger: ACCACCGAGCAGAGACTGGCAAAAACACGTTTGATG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCACATGTTGCTCTCTCTaGCTAGAGAGAGCCCTTCAT +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLTCCSL*LERALH
Trigger: ATGAAGGGCTCTCTCTAGGCAGAGAGAGCAACATGT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAGGCTTTTCCGGAAGTaGTGGCGTGGCTTTCAGATA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYRLFRK*WRGFQI
Trigger: TATCTGAAAGCCACGCCAGCACTTCCGGAAAAGCCT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTCTGACGTGGCTGGCTaGTTTCTTTTGATGAATGGG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSDVAG*FLLMNG
Trigger: CCCATTCATCAAAAGAAAGCAGCCAGCCACGTCAGA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATGGGTTGAGAATCCCTaGTCTCCTGCTGAATGCTAT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTWVENP*SPAECY
Trigger: ATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCCA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCTTGAGGAAATCTCATaGCATCCCACTCCATCCTGC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYLEEIS*HPTPSC
Trigger: GCAGGATGGAGTGGGATGGCATGAGATTTCCTCAAG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTACCCCTTCGTGTTCATaGCCTGTATTATGCCCTCTT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCTPSCS*PVLCPL
Trigger: AAGAGGGCATAATACAGGGCATGAACACGAAGGGGT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAGTTCGATGATCTGTaGTCGGCACATCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCEFDDL*SAHQTC
Trigger: ACACGTTTGATGTGCCGACCACAGATCATCGAACTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGAGTTCGATGATCTGTaGTCGGCACATCAAACGTGT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTEFDDL*SAHQTC
Trigger: ACACGTTTGATGTGCCGACCACAGATCATCGAACTC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATCCTTGTTCTCCTCTaGAGTAAAGAGGATTCGGAA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWILVLL*SKEDSE
Trigger: TTCCGAATCCTCTTTACTCCAGAGGAGAACAAGGAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCTTTTCCGGAAGTGCTaGCGTGGCTTTCAGATAGAG +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYLFRKC*RGFQIE
Trigger: CTCTATCTGAAAGCCACGCCAGCACTTCCGGAAAAG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTTCACAAGGATGATTTaGCTGCTGCCAAGGACAGTC +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLFTRMI*LLPRTV
Trigger: GACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAA...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTTCACAAGGATGATTTaGCTGCTGCCAAGGACAGTC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCFTRMI*LLPRTV
Trigger: GACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGTCCTGATGTGCAGATaGGTTGAGAATCCCTGCTCT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYVLMCR*VENPCS
Trigger: AGAGCAGGGATTCTCAACCCATCTGCACATCAGGAC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGTCTTAGGGATCACTTaGTGTACCACATTGACCATT +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWVLGIT*CTTLTI
Trigger: AATGGTCAATGTGGTACACCAAGTGATCCCTAAGAC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGAAATCATCAGGATGTaGAAACCGCATTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWEIIRM*KPHSLV
Trigger: CACCAAAGAATGCGGTTTCCACATCCTGATGATTTC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCTTGGAAGGATTAGAATaGATTTTTGCCCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: QCGLVCRRWRQWIRYTHSLEGLE*IFALIF
Trigger: AAAGATGAGGGCAAAAATCCATTCTAATCCTTCCAA...GCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp CAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCGAACATTACATTTATTaGGTACCTGTCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: QCGLVCRRWRQWIRYTHSEHYIY*VPVKLC
Trigger: GCAAAGTTTGACAGGTACCCAATAAATGTAATGTTC...GCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTATCTAAGAGTTCGATaGTCTGTGGTCGGCACATCA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCYLRVR*SVVGTS
Trigger: TGATGTGCCGACCACAGATCATCGAACTCTTAGATA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTTTGCTTCATGCACATaGCATTATGTCAAACACTCG +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLFASCT*HYVKHS
Trigger: CGAGTGTTTGACATAATGTCATGTGCATGAAGCAAA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGTTACCACTAAAGGGTaGTCCCCTTCAGATAATAAA +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLVTTKG*SPSDNK
Trigger: TTTATTATCTGAAGGGGATCACCCTTTAGTGGTAAC...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCCTGGTCTGCTTTGCTaGGAATGGATTCTCCAATGT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYPGLLC*EWILQC
Trigger: ACATTGGAGAATCCATTCTCAGCAAAGCAGACCAGG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTCAGTATTGTCACCTCTaGCTTGAGGCTCCTAAAGAA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCQYCHL*LEAPKE
Trigger: TTCTTTAGGAGCCTCAAGTCAGAGGTGACAATACTG...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATTTTGCCAACACATTaGGGGTCCTTGGAAGCAGAT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTILPTH*GSLEAD
Trigger: ATCTGCTTCCAAGGACCCTCAATGTGTTGGCAAAAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TACAGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTGACATACCAAAATATTaGCTGTGGTTTCCCTGGTTG +
Preference number: 4 (lower is better)
Translates to: YRLRHTKILTVVSLVGRIDIPKY*LWFPWL
Trigger: CAACCAGGGAAACCACAGTCAATATTTTGGTATGTC...AATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCATCAAACGTGTTTTTaGCAGTCTCTGCTCGGTGGT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYHQTCF*QSLLGG
Trigger: ACCACCGAGCAGAGACTGGCAAAAACACGTTTGATG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATTTTAAAAAGAAACTaGAGTACCCAGCGTCACGCA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWILKRN*STQRHA
Trigger: TGCGTGACGCTGGGTACTGCAGTTTCTTTTTAAAAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTCATGGGATCGCAATaGTTGTGTTCAAGGAAACCT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVMGSQ*LCSRKP
Trigger: AGGTTTCCTTGAACACAAGCATTGCGATCCCATGAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGTCATGGGATCGCAATaGTTGTGTTCAAGGAAACCT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCVMGSQ*LCSRKP
Trigger: AGGTTTCCTTGAACACAAGCATTGCGATCCCATGAC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACCTAAAGGGAAGAAATaGACCCAATCTCAAACCAGC +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTPKGKK*TQSQTS
Trigger: GCTGGTTTGAGATTGGGTGCATTTCTTCCCTTTAGG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCAGTTACAATTCATCTaGATCTGTGTGATGCTTGGT +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWQLQFI*ICVMLG
Trigger: ACCAAGCATCACACAGATGCAGATGAATTGTAACTG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCAAAGGAATGAATTTTaGCAACACATTGAGGGTCCT +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWQRNEF*QHIEGP
Trigger: AGGACCCTCAATGTGTTGGCAAAATTCATTCCTTTG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp CTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCAACATGAATAGATGTCCATTAAAGTaGTGGAATGATACCAGATCA +
Preference number: 4 (lower is better)
Translates to: LVCRRWRQWIRYTHSNMNRCPLK*WNDTRS
Trigger: TGATCTGGTATCATTCCAGCACTTTAATGGACATCT...ATTCATGTTGCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGAACTTTCACCAACCTTaGAATTTTGTCATTGTTCCT +
Preference number: 4 (lower is better)
Translates to: STAMTVAWSKGHSQQMAENFHQP*NFVIVP
Trigger: AGGAACAATGACAAAATTCCAAGGTTGGTGAAAGTT...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CCA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTCTCACTTCTTTACTTaGTTACCTCCTATCTGTCCT +
Preference number: 4 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLSHFFT*LPPICP
Trigger: AGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCATGAGTTTTTCTGCGTaGAAGTCTGTACAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLMSFSA*KSVQSV
Trigger: GACCGACTGTACAGACTTCCACGCAGAAAAACTCAT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATGAGTTTTTCTGCGTaGAAGTCTGTACAGTCGGTC +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTMSFSA*KSVQSV
Trigger: GACCGACTGTACAGACTTCCACGCAGAAAAACTCAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAAAGTACTTGAGCTTTaGGGCTATGTCAAGAAACTC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWKVLEL*GYVKKL
Trigger: GAGTTTCTTGACATAGCCCCAAAGCTCAAGTACTTT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAGCATCACCAAGAACTaGTTAGAAATGCAGATTCTC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWSITKN*LEMQIL
Trigger: GAGAATCTGCATTTCTAACCAGTTCTTGGTGATGCT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGATTGGCCTGGAACAAATaGAGCCATCCACCTATATTT +
Preference number: 4 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRLAWNK*SHPPIF
Trigger: AAATATAGGTGGATGGCTCCATTTGTTCCAGGCCAA...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CCA 90 bp CTGAGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCGAACATTACATTTATTaGGTACCTGTCAAACTTTGC +
Preference number: 4 (lower is better)
Translates to: LRMKMIVLHGLRSMRNAIEHYIY*VPVKLC
Trigger: GCAAAGTTTGACAGGTACCCAATAAATGTAATGTTC...GATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCTCAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp AGATGCTGTATATTTGCAAGTCATCACTCTTGCTCATaGATCTTAGCATCCTCTCAGATTATTGGTCAGAGC +
Preference number: 4 (lower is better)
Translates to: RCCIFASHHSCS*ILASSQIIGQS
Trigger: GCTCTGACCAATAATCTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATGACTTGCAAATATACAGCATCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAGAAACCTCCATGCCTaGGGTAATATAGCCTTCTTC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYRNLHA*GNIAFF
Trigger: GAAGAAGGCTATATTACCTCAGGCATGGAGGTTTCT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAGAAGGTCACTAGTGTaGTACCTGTGCCTTCTTGAT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYRRSLV*YLCLLD
Trigger: ATCAAGAAGGCACAGGTATCACACTAGTGACCTTCT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATTGTACCAAAATCTTaGACTGTGCAAAGCAGTTTC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWIVPKS*TVQSSF
Trigger: GAAACTGCTTTGCACAGTTCAAGATTTTGGTACAAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATTAATGAGTTTTTCTaGGTGGAAGTCTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWINEFF*VEVCTV
Trigger: GACTGTACAGACTTCCACGCAGAAAAACTCATTAAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTTCATACTTTTCATTTaGTGTGAGGTTCCTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCFILFI*CEVPGE
Trigger: CTCCCCAGGAACCTCACAGCAAATGAAAAGTATGAA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATTTTCTCCAATGTGTGTaGATTTCCACGGGACGCATA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYFLQCV*ISTGRI
Trigger: TATGCGTCCCGTGGAAATGCACACACATTGGAGAAA...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGTTCCTCAAAATCAGTaGAACTTCATAGACTTCACA +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWVPQNQ*NFIDFT
Trigger: TGTGAAGTCTATGAAGTTCCACTGATTTTGAGGAAC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGTTCAGTACTATCTGTaGTTTCAGGCATCTACTGGG +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYVQYYL*FQASTG
Trigger: CCCAGTAGATGCCTGAAACCACAGATAGTACTGAAC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATCCTCTCAGATTATTaGTCAGAGCGATCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTILSDY*SERSLL
Trigger: GAGCAAAGATCGCTCTGACCAATAATCTGAGAGGAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGTCTTAGGGATCACTTaGTGTACCACATTGACCATT +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCVLGIT*CTTLTI
Trigger: AATGGTCAATGTGGTACACCAAGTGATCCCTAAGAC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGAAATCATCAGGATGTaGAAACCGCATTCTTTGGTG +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTEIIRM*KPHSLV
Trigger: CACCAAAGAATGCGGTTTCCACATCCTGATGATTTC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAGGCTCCTAAAGAAGTaGTTAGACTTAGCATGCCAC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYRLLKK*LDLACH
Trigger: GTGGCATGCTAAGTCTAACCACTTCTTTAGGAGCCT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp CTGGTCTGCAGAAGGTGGAGGCAATGGATTAGATATACACATAGCAACATGAATTTGGAAGGATTAGAATaGATTTTTGCCCTCATCTTT +
Preference number: 4 (lower is better)
Translates to: LVCRRWRQWIRYTHSNMNLEGLE*IFALIF
Trigger: AAAGATGAGGGCAAAAATCCATTCTAATCCTTCCAA...ATTCATGTTGCTATGTGTATATCTAATCCATTGCCTCCACCTTCTGCAGACCAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
3UTR CAA 72 bp GGAGGGTTAATTTCATCAACTAGGTCCTATGCAGATTaGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTA +
Preference number: 4 (lower is better)
Translates to: GGLISSTRSYAD*VRLLRTVMKEL
Trigger: TAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATAGGACCTAGTTGATGAAATTAACCCTCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATTCCTGAAAACTTCTaGTGTGTTGTTTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTIPENF*CVVSPI
Trigger: TATGGGGGAAACAACACATCAGAAGTTTTCAGGAAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATCCAGGTCAATTCCTaGAAACTTCTGATGTGTTGT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTIQVNS*KLLMCC
Trigger: ACAACACATCAGAAGTTTTCAGGAATTGACCTGGAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAACATATCAAGGTATaGGGAAACCCAAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCEHIKV*GNPKET
Trigger: TGTTTCCTTTGGGTTTCCTCATACCTTGATATGTTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTGGGGACTGAGAGTTTaGCTTTTAATAAATTCCCAG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCWGLRV*LLINSQ
Trigger: CTGGGAATTTATTAAAAGTCAAACTCTCAGTCCCCA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGCAAGTCATCACTCTTaGTCATTGATCTTAGCATCC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYASHHS*SLILAS
Trigger: GGATGCTAAGATCAATGAGCAAGAGTGATGACTTGC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATAAATGTTGGACCATaGCTGATCTTGATTATGAGT +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWINVGP*LILIMS
Trigger: ACTCATAATCAAGATCAGCCATGGTCCAACATTTAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCAATATAGCCTTCTTCTaGGCTAATGGAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLNIAFF*ANGEMR
Trigger: CCTCATTTCTCCATTAGCCCAGAAGAAGGCTATATT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAAATATAGCCTTCTTCTaGGCTAATGGAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTNIAFF*ANGEMR
Trigger: CCTCATTTCTCCATTAGCCCAGAAGAAGGCTATATT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATATCCTCTCAGATTATTaGTCAGAGCGATCTTTGCTC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYILSDY*SERSLL
Trigger: GAGCAAAGATCGCTCTGACCAATAATCTGAGAGGAT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGAAGGAGGCACATTTTaGGGAGGGTTAATTTCATCA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYEGGTF*GGLISS
Trigger: TGATGAAATTAACCCTCCCCAAAATGTGCCTCCTTC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTTTATAAAATGTATATaGACAGCTTCAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: YADLVRLLRTVMKELWLWFIKCI*TASVAW
Trigger: CCAAGCCACTGAAGCTGTCCATATACATTTTATAAA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp GTAGTGTCTTTAGAGGTTATAGAAATAAATTGTCTATaGAGTATGGCAGTCCTCCTCATCTATGGCTTCAGT +
Preference number: 4 (lower is better)
Translates to: VVSLEVIEINCL*SMAVLLIYGFS
Trigger: ACTGAAGCCATAGATGAGGAGGACTGCCATACTCAATAGACAATTTATTTCTATAACCTCTAAAGACACTAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATATTCCTGAAAACTTCTaGTGTGTTGTTTCCCCCATA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYIPENF*CVVSPI
Trigger: TATGGGGGAAACAACACATCAGAAGTTTTCAGGAAT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGAACATATCAAGGTATaGGGAAACCCAAAGGAAACA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYEHIKV*GNPKET
Trigger: TGTTTCCTTTGGGTTTCCTCATACCTTGATATGTTC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGTTACCACTAAAGGGTaGTCCCCTTCAGATAATAAA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYVTTKG*SPSDNK
Trigger: TTTATTATCTGAAGGGGATCACCCTTTAGTGGTAAC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR TCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATTATTACAAAGTACTTaGGCTTTGGGGCTATGTCAA +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLLQST*ALGLCQ
Trigger: TTGACATAGCCCCAAAGCTCAAGTACTTTGTAATAA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTATTAATGAGTTTTTCTaGGTGGAAGTCTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCINEFF*VEVCTV
Trigger: GACTGTACAGACTTCCACGCAGAAAAACTCATTAAT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCATTAATGAGTTTTTCTaGGTGGAAGTCTGTACAGTC +
Preference number: 4 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLINEFF*VEVCTV
Trigger: GACTGTACAGACTTCCACGCAGAAAAACTCATTAAT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAATATAGCCTTCTTCTaGGCTAATGGAGAAATGAGG +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYNIAFF*ANGEMR
Trigger: CCTCATTTCTCCATTAGCCCAGAAGAAGGCTATATT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATACTGATGTGCCTGACTaGATACTAGTCATTATTTCA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYTDVPD*ILVIIS
Trigger: TGAAATAATGACTAGTATGCAGTCAGGCACATCAGT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTTTATAAAATGTATATaGACAGCTTCAGTGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCFIKCI*TASVAW
Trigger: CCAAGCCACTGAAGCTGTCCATATACATTTTATAAA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATTCCACAAGCATGTGTTaGAAGGGTTATTTTCATCAA +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYSTSMC*KGYFHQ
Trigger: TTGATGAAAATAACCCTTCCAACACATGCTTGTGGA...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCCTGAAATTATATTCTaGCTCAGGTTGCTAAGTAAC +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYPEIIF*LRLLSN
Trigger: GTTACTTAGCAACCTGAGCCAGAATATAATTTCAGG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CCA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAAGGAGTTTAGTCATATaGCCACAAAGGAATGAATTT +
Preference number: 4 (lower is better)
Translates to: CICVMLGCYARTCNSSVTRSLVI*PQRNEF
Trigger: AAATTCATTCCTTTGTGGCCATATGACTAAACTCCT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
3UTR CAA 72 bp TTTATACAGATGCTGTATATTTGCAAGTCATCACTCTaGCTCATTGATCTTAGCATCCTCTCAGATTATTGG +
Preference number: 4 (lower is better)
Translates to: FIQMLYICKSSL*LIDLSILSDYW
Trigger: CCAATAATCTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATGACTTGCAAATATACAGCATCTGTATAAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR GCA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGCTGTTAAGCTACTTTaGCATTCCAAATTTGCTAAT +
Preference number: 4 (lower is better)
Translates to: KICHLVVFRPISSVFRGYAVKLL*HSKFAN
Trigger: ATTAGCAAATTTGGAATGGCAAAGTAGCTTAACAGC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGGCTCCATACCCAGCTaGAAGCCGCCCGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKGSIPS*KPPALS
Trigger: GGAGAGTGCGGGCGGCTTCAAGCTGGGTATGGAGCC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGGCTCCATACCCAGCTaGAAGCCGCCCGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMGSIPS*KPPALS
Trigger: GGAGAGTGCGGGCGGCTTCAAGCTGGGTATGGAGCC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGCCAGGGTAAGGACCTaGGGTTCCTGGAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKARVRT*GSWSSG
Trigger: TCCAGAACTCCAGGAACCCAAGGTCCTTACCCTGGC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTAAGGGACCTTGGGGCTaGGGAGGCAGAGCCATTCCA +
Preference number: 5 (lower is better)
Translates to: ASLASWGCINEFFCVEVCKGPWG*GGRAIP
Trigger: TGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTT...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS CCA 90 bp CACACTCATCCTGAATTCTCCCTCTCTTCCTCAAGGGCCCTAGGGTaGGAACCTTTCCTCTGTCCCCAGGGAGCATCCTGTGCAGTCCTT +
Preference number: 5 (lower is better)
Translates to: HTHPEFSLSSSRALG*EPFLCPQGASCAVL
Trigger: AAGGACTGCACAGGATGCTCCCTGGGGACAGAGGAAAGGTTCCCACCCTAGGGCCCTTGAGGAAGAGAGGGAGAATTCAGGATGAGTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540892.1
ENST00000634515.1
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCAAGGGACCTTGGGGCTaGGGAGGCAGAGCCATTCCA +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIKGPWG*GGRAIP
Trigger: TGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGCGGGCAAAGGGCTTATaGGAGATAGGCCTGACTACA +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKRAKGL*EIGLTT
Trigger: TGTAGTCAGGCCTATCTCCAATAAGCCCTTTGCCCG...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGTCCAAAGGGATTTTTaGTGTGCCATGTGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKVQRDF*CAMCAW
Trigger: CCAGGCACACATGGCACACAAAAAATCCCTTTGGAC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTTCTCCAGGTGGCAGGTaGGGAATCTGGCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: ASLASWGCINEFFCVEVCSPGGR*GIWQKR
Trigger: CCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAGA...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGATGTTGTTGATCTTCTaGGGCCGCACAGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKMLLIF*GRTDSP
Trigger: TGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACAT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCTCCCTGGCCTCCTGGGGCTGCATTAATGAGTTTTTCTGCGTGGAAGTCTGTGTGGTGATGGGGGTTTaGCTGCCAGATGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: ASLASWGCINEFFCVEVCVVMGV*LPDGFP
Trigger: AGGAAACCCATCTGGCAGCAAAACCCCCATCACCAC...ACAGACTTCCACGCAGAAAAACTCATTAATGCAGCCCCAGGAGGCCAGGGAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGGCCCTCCAACCACCTaGATGGGCAGAATGACTTCT +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMGPPTT*MGRMTS
Trigger: AGAAGTCATTCTGCCCATCAAGGTGGTTGGAGGGCC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGGTCTCCTGGTCTGCTTaGCTGAGAATGGATTCTCCA +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKVSWSA*LRMDSP
Trigger: TGGAGAATCCATTCTCAGCAAAGCAGACCAGGAGAC...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACCCCCTTCAGCTCCTTaGGGGAAGGTGATGTCCAAG +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEPPSAP*GKVMSK
Trigger: CTTGGACATCACCTTCCCCAAAGGAGCTGAAGGGGG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCGTGGTGATGGGGGTTTaGCTGCCAGATGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIVVMGV*LPDGFP
Trigger: AGGAAACCCATCTGGCAGCAAAACCCCCATCACCAC...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCGGGCAAAGGGCTTATaGGAGATAGGCCTGACTACA +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMRAKGL*EIGLTT
Trigger: TGTAGTCAGGCCTATCTCCAATAAGCCCTTTGCCCG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTGTGCACAGTGCTCCTaGGAGTTCTGCCACACAGCT +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRICAQCS*EFCHTA
Trigger: AGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCACA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GAAGAGTGCACAGGTGGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGCTCCCATGTCCACACTaGGCCTGGAACAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: EECTGGMWGDTMWSGLQKLPCPH*AWNKWS
Trigger: GCTCCATTTGTTCCAGGCCAAGTGTGGACATGGGAG...CTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCCACCTGTGCACTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCACTCCAGGAGCCACTTaGTGGCCAATATCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRITPGAT*WPISLG
Trigger: CCCCAAAGATATTGGCCACAAAGTGGCTCCTGGAGT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAATCTCCAGGTGGCAGGTaGGGAATCTGGCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMESPGGR*GIWQKR
Trigger: CCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAGA...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCTTCACAAGGATGATTaGGCTGCTGCCAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMLHKDD*AAAKDS
Trigger: ACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAAG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGATGTTGTTGATCTTCTaGGGCCGCACAGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMMLLIF*GRTDSP
Trigger: TGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACAT...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGGAGACTGTGATGTTGTaGATCTTCTTGGGCCGCACA +
Preference number: 5 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMETVML*IFLGRT
Trigger: TGTGCGGCCCAAGAAGATCAACAACATCACAGTCTC...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGGAGACTGTGATGTTGTaGATCTTCTTGGGCCGCACA +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMETVML*IFLGRT
Trigger: TGTGCGGCCCAAGAAGATCAACAACATCACAGTCTC...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGAATTTTGCCAACACATaGAGGGTCCTTGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKNFANT*RVLGSR
Trigger: TCTGCTTCCAAGGACCCTCAATGTGTTGGCAAAATT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCACATCAAACGTGTTTTaGCCAGTCTCTGCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRITSNVF*PVSARW
Trigger: CCACCGAGCAGAGACTGGCAAAAACACGTTTGATGT...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAACTCCAGGAGCCACTTaGTGGCCAATATCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMETPGAT*WPISLG
Trigger: CCCCAAAGATATTGGCCACAAAGTGGCTCCTGGAGT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTCCAGGAAGCCTTCCTaGACTCTCTTGATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMSRKPS*TLLICF
Trigger: AAAGCAGATCAAGAGAGTCAAGGAAGGCTTCCTGGA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGTATGTGTTGCACATGTaGCTCTCTCTGCCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMYVLHM*LSLPRE
Trigger: CTCTCTAGGCAGAGAGAGCAACATGTGCAACACATA...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGCCAGGGTAAGGACCTaGGGTTCCTGGAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLARVRT*GSWSSG
Trigger: TCCAGAACTCCAGGAACCCAAGGTCCTTACCCTGGC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGGAGACTGTGATGTTGTaGATCTTCTTGGGCCGCACA +
Preference number: 5 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWETVML*IFLGRT
Trigger: TGTGCGGCCCAAGAAGATCAACAACATCACAGTCTC...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS TCA 90 bp TCCCTTGCCCTTTGTGCTCCATCAATAGAGGCTGCTGGTGTTTCCTaGATCCATGATGCTGCTTCTGACCTCCAGTCCTTTGCACTTGTG +
Preference number: 5 (lower is better)
Translates to: SLALCAPSIEAAGVS*IHDAASDLQSFALV
Trigger: CACAAGTGCAAAGGACTGGAGGTCAGAAGCAGCATCATGGATTCAGGAAACACCAGCAGCCTCTATTGATGGAGCACAAAGGGCAAGGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540892.1
ENST00000634515.1
CDS GCA 90 bp TCGATGATCTGTGGTCGGCACATCAAACGTGTTTTTGCCAGTCTCTaGTCGGTGGTCAGGGACATTTCCTTCAGGAACTCTGAGGGTGTA +
Preference number: 5 (lower is better)
Translates to: SMICGRHIKRVFASL*SVVRDISFRNSEGV
Trigger: TACACCCTCAGAGTTCCTGAAGGAAATGTCCCTGACCACCGAGCAGAGACTGGCAAAAACACGTTTGATGTGCCGACCACAGATCATCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 12 transcripts:
ENST00000288168.14
ENST00000321489.9
ENST00000393567.7
ENST00000538248.5
ENST00000539447.5
ENST00000541601.5
ENST00000634268.1
ENST00000634392.1
ENST00000634745.1
ENST00000634987.1
ENST00000635365.1
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATGGACTCCAGGAGCCACTTaGTGGCCAATATCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: ARILTQLPLSKRERSWRWTPGAT*WPISLG
Trigger: CCCCAAAGATATTGGCCACAAAGTGGCTCCTGGAGT...CCATCTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAGAGCTCCCTTGTGCTaGCGTTCTTCTTGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMERAPLC*RSSCSF
Trigger: AAAGGAGCAAGAAGAACGCAAGCACAAGGGAGCTCT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTCTCCAGGTGGCAGGTaGGGAATCTGGCAGAAAAGG +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLSPGGR*GIWQKR
Trigger: CCTTTTCTGCCAGATTCCCAACCTGCCACCTGGAGA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAAAGGAGACTGTGATGTaGTTGATCTTCTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEKETVM*LIFLGR
Trigger: GCGGCCCAAGAAGATCAACAACATCACAGTCTCCTT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCATCACTCTTGCTCATaGATCTTAGCATCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMHHSCS*ILASSQ
Trigger: CTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCCACCCCAAGGCTGGCTATAAGCCATGCTGGGGCTGGTGGCATGTTAGACAAGACAGATGCTGTATATTaGCAAGTCATCACTCTTGCT +
Preference number: 5 (lower is better)
Translates to: ATPRLAISHAGAGGMLDKTDAVY*QVITLA
Trigger: AGCAAGAGTGATGACTTGCAAATATACAGCATCTGT...CTTGTCTAACATGCCACCAGCCCCAGCATGGCTTATAGCCAGCCTTGGGGTGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS TCA 90 bp TTGTGCAAAGTTAGTCTTCCGAAGGTTTCTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTGCCCTCGGAGTTGGCAGGCACCACA +
Preference number: 5 (lower is better)
Translates to: LCKVSLPKVSPAFRG*NSNENVPSELAGTT
Trigger: TGTGGTGCCTGCCAACTCCGAGGGCACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGGAGAAACCTTCGGAAGACTAACTTTGCACAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTTTTTTCTCACCCAGCTaGAAGCCGCCCGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFFFSPS*KPPALS
Trigger: GGAGAGTGCGGGCGGCTTCAAGCTGGGTGAGAAAAA...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
50% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGTTTTTCTCACCCAGCTaGAAGCCGCCCGCACTCTCC +
Preference number: 5 (lower is better)
Translates to: STAMTVAWSKGHSQQMAEFFSPS*KPPALS
Trigger: GGAGAGTGCGGGCGGCTTCAAGCTGGGTGAGAAAAA...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGTGCTTGCGTTCTTCTaGCTCCTTTTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEVLAFF*LLFGFL
Trigger: GAGAAAGCCAAAAAGGAGCAAGAAGAACGCAAGCAC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGCAGATAGAGCTCATATaGGTAGTAACCCAAGTCAGT +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMQIELI*VVTQVS
Trigger: ACTGACTTGGGTTACTACCAATATGAGCTCTATCTG...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCTGAGGCAGGAGGAGGCCTTGATTGTAGGAGTTTAAGGCTGCAGGGAGCTATGCAGATAGAGCTCATATaGGTAGTAACCCAAGTCAGT +
Preference number: 5 (lower is better)
Translates to: AEAGGGLDCRSLRLQGAMQIELI*VVTQVS
Trigger: ACTGACTTGGGTTACTACCAATATGAGCTCTATCTG...CATAGCTCCCTGCAGCCTTAAACTCCTACAATCAAGGCCTCCTCCTGCCTCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAATTGTCACCTCTGACTaGAGGCTCCTAAAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEIVTSD*RLLKKW
Trigger: CCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAAT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCACACTGCCTCCCAGGAATCCAGGGAATATTAGGGAATAATAAGCAGCCACTCCCATGTCCACACTaGGCCTGGAACAAATGGAGC +
Preference number: 5 (lower is better)
Translates to: YAHCLPGIQGILGNNKQPLPCPH*AWNKWS
Trigger: GCTCCATTTGTTCCAGGCCAAGTGTGGACATGGGAG...TGGCTGCTTATTATTCCCTAATATTCCCTGGATTCCTGGGAGGCAGTGTGCATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATCTGTGGTTTCCCTGGTaGGAAGGATTAGAATGGATT +
Preference number: 5 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDLWFPW*EGLEWI
Trigger: AATCCATTCTAATCCTTCCAACCAGGGAAACCACAG...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCCAGATAGAGCTCATATaGGTAGTAACCCAAGTCAGT +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIQIELI*VVTQVS
Trigger: ACTGACTTGGGTTACTACCAATATGAGCTCTATCTG...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGAGACTGTGATGTTGTaGATCTTCTTGGGCCGCACA +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLETVML*IFLGRT
Trigger: TGTGCGGCCCAAGAAGATCAACAACATCACAGTCTC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGTTATGGCTGTGGGTTaGGCAAATGTCAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEVMAVG*ANVKFC
Trigger: GCAAAACTTGACATTTGCCAAACCCACAGCCATAAC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGTTGTGGCCAATATCTTaGGGGCTGATTACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWLWPIS*GLITLK
Trigger: CTTTAAAGTAATCAGCCCCAAAGATATTGGCCACAA...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTACTCCAGGAGCCACTTaGTGGCCAATATCTTTGGGG +
Preference number: 5 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFTPGAT*WPISLG
Trigger: CCCCAAAGATATTGGCCACAAAGTGGCTCCTGGAGT...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTCCAGGAAGCCTTCCTaGACTCTCTTGATCTGCTTT +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLSRKPS*TLLICF
Trigger: AAAGCAGATCAAGAGAGTCAAGGAAGGCTTCCTGGA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTATGTGTTGCACATGTaGCTCTCTCTGCCTAGAGAG +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLYVLHM*LSLPRE
Trigger: CTCTCTAGGCAGAGAGAGCAACATGTGCAACACATA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGATTATTACAAAGTACTaGAGCTTTGGGGCTATGTCA +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMIITKY*SFGAMS
Trigger: TGACATAGCCCCAAAGCTCAAGTACTTTGTAATAAT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGACAGATGCTGTATATTaGCAAGTCATCACTCTTGCT +
Preference number: 5 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWTDAVY*QVITLA
Trigger: AGCAAGAGTGATGACTTGCAAATATACAGCATCTGT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAATGCACCCAATCTCAAACCAGCCTGGAAGAGGGTTCACACTGGGGCAGGATCTTCCACAAGCATGTGTaGGAAGGGTTATTTTCATCA +
Preference number: 5 (lower is better)
Translates to: KCTQSQTSLEEGSHWGRIFHKHV*EGLFSS
Trigger: TGATGAAAATAACCCTTCCAACACATGCTTGTGGAA...GATCCTGCCCCAGTGTGAACCCTCTTCCAGGCTGGTTTGAGATTGGGTGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GGGTTGAGAATCCCTGCTCTCCTGCTGAATGCTATCCAAGGCGGGGTGTGTATGACATCTCCAAATGTCTaGCAAAGTTTGGTTTTAGGA +
Preference number: 5 (lower is better)
Translates to: GLRIPALLLNAIQGGVCMTSPNV*QSLVLG
Trigger: TCCTAAAACCAAACTTTGCAAGACATTTGGAGATGT...CATACACACCCCGCCTTGGATAGCATTCAGCAGGAGAGCAGGGATTCTCAACCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTACATCAAACGTGTTTTaGCCAGTCTCTGCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFTSNVF*PVSARW
Trigger: CCACCGAGCAGAGACTGGCAAAAACACGTTTGATGT...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAAAACTTCTGATGTGTaGTTTCCCCCATATCTAAGA +
Preference number: 5 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWKTSDV*FPPYLR
Trigger: TCTTAGATATGGGGGAAACAACACATCAGAAGTTTT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATGCAATGACTGTAGCTaGGTCAAAAGGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGCNDCS*VKRTQS
Trigger: TGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCA...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGAGCTGGGGAACTACCTaGTCCAGGAAGCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLSWGTT*SRKPSL
Trigger: CAAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCAAGGGACCTTGGGGCTaGGGAGGCAGAGCCATTCCA +
Preference number: 5 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLKGPWG*GGRAIP
Trigger: TGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAACTAGAAAAAGCTTTTTaGGTCCTAGAGTATACTGGG +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMELEKAF*VLEYTG
Trigger: CCCAGTATACTCTAGGACCAAAAAAGCTTTTTCTAG...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAGAAATAAATTGTCTATaGAGTATGGCAGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMEEINCL*SMAVLL
Trigger: GAGGAGGACTGCCATACTCAATAGACAATTTATTTC...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp CTGAGTGATGAGATGGGAGGAGACCCTCAAATCCATCTCCCGGAAGAGTTCTGGAAATCTGTCATCTGGTaGTCTTTAGACCTATCAGTA +
Preference number: 5 (lower is better)
Translates to: LSDEMGGDPQIHLPEEFWKSVIW*SLDLSV
Trigger: TACTGATAGGTCTAAAGACAACCAGATGACAGATTT...CCAGAACTCTTCCGGGAGATGGATTTGAGGGTCTCCTCCCATCTCATCACTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTGTGCACAGTGCTCCTaGGAGTTCTGCCACACAGCT +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWCAQCS*EFCHTA
Trigger: AGCTGTGTGGCAGAACTCCAAGGAGCACTGTGCACA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCAGCTGGCCAGCACCTaGATTTCAGCCTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWQLAST*ISALWN
Trigger: GTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGCTG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp GGAATGTGGGGTGACACAATGTGGTCTGGTCTGCAGAAGGTGGAGGCAATGGATGGTACCTGTCAAACTTaGCACATGCATCATATAATT +
Preference number: 5 (lower is better)
Translates to: GMWGDTMWSGLQKVEAMDGTCQT*HMHHII
Trigger: AATTATATGATGCATGTGCAAAGTTTGACAGGTACC...ATCCATTGCCTCCACCTTCTGCAGACCAGACCACATTGTGTCACCCCACATTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp GCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATGGCAACTTTCACCAACCTaGGAATTTTGTCATTGTTCC +
Preference number: 5 (lower is better)
Translates to: ARILTQLPLSKRERSWRWQLSPT*EFCHCS
Trigger: GGAACAATGACAAAATTCCAAGGTTGGTGAAAGTTG...CCATCTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTTTCTCACTTCTTTACTaGGTTACCTCCTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLFSLLY*VTSYLS
Trigger: GGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAA...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCGCCAGGGTAAGGACCTaGGGTTCCTGGAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLARVRT*GSWSSG
Trigger: TCCAGAACTCCAGGAACCCAAGGTCCTTACCCTGGC...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGCCAGGGTAAGGACCTaGGGTTCCTGGAGTTCTGGA +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTARVRT*GSWSSG
Trigger: TCCAGAACTCCAGGAACCCAAGGTCCTTACCCTGGC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTCAGATAGAGCTCATATaGGTAGTAACCCAAGTCAGT +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLQIELI*VVTQVS
Trigger: ACTGACTTGGGTTACTACCAATATGAGCTCTATCTG...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAAGGGACCTTGGGGCTaGGGAGGCAGAGCCATTCCA +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYKGPWG*GGRAIP
Trigger: TGGAATGGCTCTGCCTCCCAAGCCCCAAGGTCCCTT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTGGAACCCTGAGCTGAGAATCCAGTTCACACTGGGCTCTCAACCCATGGAAACATCTCCAAATGTCTaGCAAAGTTTGGTTTTAGGA +
Preference number: 5 (lower is better)
Translates to: LWNPELRIQFTLGSQPMETSPNV*QSLVLG
Trigger: TCCTAAAACCAAACTTTGCAAGACATTTGGAGATGT...TTCCATGGGTTGAGAGCCCAGTGTGAACTGGATTCTCAGCTCAGGGTTCCACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp CTGAGCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGAAAACTTCTGATGTGTaGTTTCCCCCATATCTAAGA +
Preference number: 5 (lower is better)
Translates to: LSQDFNPAASLKKREELEKTSDV*FPPYLR
Trigger: TCTTAGATATGGGGGAAACAACACATCAGAAGTTTT...CTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp GCCAGGATTTTAACCCAGCTGCCTCTCTCAAAAAGAGAGAGGAGTTGGAGATGGAAAACTTCTGATGTGTaGTTTCCCCCATATCTAAGA +
Preference number: 5 (lower is better)
Translates to: ARILTQLPLSKRERSWRWKTSDV*FPPYLR
Trigger: TCTTAGATATGGGGGAAACAACACATCAGAAGTTTT...CCATCTCCAACTCCTCTCTCTTTTTGAGAGAGGCAGCTGGGTTAAAATCCTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp GCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGACAACTTTCACCAACCTaGGAATTTTGTCATTGTTCC +
Preference number: 5 (lower is better)
Translates to: AMTVAWSKGHSQQMAEPGQLSPT*EFCHCS
Trigger: GGAACAATGACAAAATTCCAAGGTTGGTGAAAGTTG...TCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGTGCAATGACTGTAGCTaGGTCAAAAGGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: STAMTVAWSKGHSQQMAECNDCS*VKRTQS
Trigger: TGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCA...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR CAA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTTGCAATGACTGTAGCTaGGTCAAAAGGACACAGTCA +
Preference number: 5 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFCNDCS*VKRTQS
Trigger: TGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCA...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000288168.14
ENST00000542890.1
ENST00000634987.1
ENST00000635523.1
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATCCCCCTTCAGCTCCTTaGGGGAAGGTGATGTCCAAG +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYPPSAP*GKVMSK
Trigger: CTTGGACATCACCTTCCCCAAAGGAGCTGAAGGGGG...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATCTGTCCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTTGCTTTAAATACCCCTTaGCTTCATGCACATGACATT +
Preference number: 5 (lower is better)
Translates to: YLSSKVQLGNYLVQEAFLALNTP*LHAHDI
Trigger: AATGTCATGTGCATGAAGCAAAGGGGTATTTAAAGC...AAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGGACAGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCAGCTGGGGAACTACCTaGTCCAGGAAGCCTTCCTTG +
Preference number: 5 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLSWGTT*SRKPSL
Trigger: CAAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCTTCACAAGGATGATTaGGCTGCTGCCAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWLHKDD*AAAKDS
Trigger: ACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAAG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGCTTCACAAGGATGATTaGGCTGCTGCCAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLLHKDD*AAAKDS
Trigger: ACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAAG...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGATGTTGTTGATCTTCTaGGGCCGCACAGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLMLLIF*GRTDSP
Trigger: TGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACAT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGAAGGAGACTGTGATGTaGTTGATCTTCTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLKETVM*LIFLGR
Trigger: GCGGCCCAAGAAGATCAACAACATCACAGTCTCCTT...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAAGGAGACTGTGATGTaGTTGATCTTCTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWKETVM*LIFLGR
Trigger: GCGGCCCAAGAAGATCAACAACATCACAGTCTCCTT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTGGTGATGGGGGTTTaGCTGCCAGATGGGTTTCCT +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVVMGV*LPDGFP
Trigger: AGGAAACCCATCTGGCAGCAAAACCCCCATCACCAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTTCTGGTAGCTGGATTTaGGCCAGTTTGCGGCGACTC +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCSGSWI*ASLRRL
Trigger: GAGTCGCCGCAAACTGGCCAAAATCCAGCTACCAGA...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATCTGGTAGCTGGATTTaGGCCAGTTTGCGGCGACTC +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTSGSWI*ASLRRL
Trigger: GAGTCGCCGCAAACTGGCCAAAATCCAGCTACCAGA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGGCCCTCCAACCACCTaGATGGGCAGAATGACTTCT +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCGPPTT*MGRMTS
Trigger: AGAAGTCATTCTGCCCATCAAGGTGGTTGGAGGGCC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTATACTGGGCTAGGGTaGTGGGGAGGTACAGAAGAA +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWYTGLG*WGGTEE
Trigger: TTCTTCTGTACCTCCCCACAACCCTAGCCCAGTATA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAACCTGGGTTCGTTTTaGTTTCTCCCCCTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWNLGSF*FLPLPS
Trigger: AGAAGGGAGGGGGAGAAACAAAAACGAACCCAGGTT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGCCCAAAGGCTACCCTaGCCTTCCACCCTTGTTCCT +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYAQRLP*PSTLVP
Trigger: AGGAACAAGGGTGGAAGGCAAGGGTAGCCTTTGGGC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACAGCTGGCCAGCACCTaGATTTCAGCCTTGTGGAAC +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTQLAST*ISALWN
Trigger: GTTCCACAAGGCTGAAATCAAGGTGCTGGCCAGCTG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGATGTGTTTCTCCAGCTaGTCAACAGGCTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWMCFSS*STGFWL
Trigger: GAGCCAAAAGCCTGTTGACAAGCTGGAGAAACACAT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAACATCAAACGTGTTTTaGCCAGTCTCTGCTCGGTGG +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTTSNVF*PVSARW
Trigger: CCACCGAGCAGAGACTGGCAAAAACACGTTTGATGT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTTTGTGGCCAATATCTTaGGGGCTGATTACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFLWPIS*GLITLK
Trigger: CTTTAAAGTAATCAGCCCCAAAGATATTGGCCACAA...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAGAGCTCCCTTGTGCTaGCGTTCTTCTTGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCRAPLC*RSSCSF
Trigger: AAAGGAGCAAGAAGAACGCAAGCACAAGGGAGCTCT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGCCTTCCTTGACTCTCTaGATCTGCTTTAAATACCCC +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLPSLTL*ICFKYP
Trigger: GGGGTATTTAAAGCAGATCAAGAGAGTCAAGGAAGG...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACTTCACAAGGATGATTaGGCTGCTGCCAAGGACAGT +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLHKDD*AAAKDS
Trigger: ACTGTCCTTGGCAGCAGCCAAATCATCCTTGTGAAG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAATGTTGTTGATCTTCTaGGGCCGCACAGACTCTCCA +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTMLLIF*GRTDSP
Trigger: TGGAGAGTCTGTGCGGCCCAAGAAGATCAACAACAT...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCAAGGAGACTGTGATGTaGTTGATCTTCTTGGGCCGC +
Preference number: 5 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLKETVM*LIFLGR
Trigger: GCGGCCCAAGAAGATCAACAACATCACAGTCTCCTT...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGCTGGTCTGCTCCTCTaGAGCCTTTGTAGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTAGLLL*SLCSVC
Trigger: ACAAACACTACAAAGGCTCAAGAGGAGCAGACCAGC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCATCACTCTTGCTCATaGATCTTAGCATCCTCTCAG +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWHHSCS*ILASSQ
Trigger: CTGAGAGGATGCTAAGATCAATGAGCAAGAGTGATG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAGGTCCTATGCAGATTaGGTAAGACTTCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWRSYAD*VRLLRT
Trigger: AGTCCTGAGAAGTCTTACCAAATCTGCATAGGACCT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAAAAAGTACACCCTTTaGAAGAGTAGGGTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWKKYTL*KSRVRD
Trigger: GTCCCTCACCCTACTCTTCAAAAGGGTGTACTTTTT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAACCTGGGTTCGTTTTaGTTTCTCCCCCTCCCTTCT +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCNLGSF*FLPLPS
Trigger: AGAAGGGAGGGGGAGAAACAAAAACGAACCCAGGTT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCCCTAGACATACCAAAATATaGACTGTGGTTTCCCTGGTT +
Preference number: 5 (lower is better)
Translates to: RMKMIVLHGLRSMRNAIPRHTKI*TVVSLV
Trigger: AACCAGGGAAACCACAGTCAATATTTTGGTATGTCT...AGGGATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp AGTACTGCAATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGACCAACCTTGGAATTTaGTCATTGTTCCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: STAMTVAWSKGHSQQMAETNLGI*SLFLKI
Trigger: GATTTTGAGGAACAATGACAAAATTCCAAGGTTGGT...CTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCATTGCAGTACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp ATGACTGTAGCTTGGTCAAAAGGACACAGTCAACAAATGGCTGAGCCAGGATTTACCAACCTTGGAATTTaGTCATTGTTCCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: MTVAWSKGHSQQMAEPGFTNLGI*SLFLKI
Trigger: GATTTTGAGGAACAATGACAAAATTCCAAGGTTGGT...AAATCCTGGCTCAGCCATTTGTTGACTGTGTCCTTTTGACCAAGCTACAGTCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000288168.14
ENST00000634987.1
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTATGTGTTTCTCCAGCTaGTCAACAGGCTTTTGGCTC +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCMCFSS*STGFWL
Trigger: GAGCCAAAAGCCTGTTGACAAGCTGGAGAAACACAT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGTCCAAAGGGATTTTTaGTGTGCCATGTGTGCCTGG +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYVQRDF*CAMCAW
Trigger: CCAGGCACACATGGCACACAAAAAATCCCTTTGGAC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTTCTCACTTCTTTACTaGGTTACCTCCTATCTGTCC +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLFSLLY*VTSYLS
Trigger: GGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGTGCAAGTCATCACTCTaGCTCATTGATCTTAGCATC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWCKSSL*LIDLSI
Trigger: GATGCTAAGATCAATGAGCAAGAGTGATGACTTGCA...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTATTGTCACCTCTGACTaGAGGCTCCTAAAGAAGTGG +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCIVTSD*RLLKKW
Trigger: CCACTTCTTTAGGAGCCTCAAGTCAGAGGTGACAAT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGACTGTGGTTTCCCTGGTaGGAAGGATTAGAATGGATT +
Preference number: 5 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRLWFPW*EGLEWI
Trigger: AATCCATTCTAATCCTTCCAACCAGGGAAACCACAG...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp CTGAGGATGAAGATGATAGTGCTCCATGGACTGAGGAGTATGAGAAATGCAATCGGTACCTGTCAAACTTaGCACATGCATCATATAATT +
Preference number: 5 (lower is better)
Translates to: LRMKMIVLHGLRSMRNAIGTCQT*HMHHII
Trigger: AATTATATGATGCATGTGCAAAGTTTGACAGGTACC...GATTGCATTTCTCATACTCCTCAGTCCATGGAGCACTATCATCTTCATCCTCAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS TCA 90 bp AGAGTTAAACACAGACTGAAATCCATCAACTACTTACTAGACGTGTaGCCTTGGTCAGGTCTGAACTTCAGTCTTCTCAATTTGTCATTG +
Preference number: 5 (lower is better)
Translates to: RVKHRLKSINYLLDV*PWSGLNFSLLNLSL
Trigger: CAATGACAAATTGAGAAGACTGAAGTTCAGACCTGACCAAGGTCACACGTCTAGTAAGTAGTTGATGGATTTCAGTCTGTGTTTAACTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537789.1
ENST00000635596.1
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGTGCTTGCGTTCTTCTaGCTCCTTTTTGGCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYVLAFF*LLFGFL
Trigger: GAGAAAGCCAAAAAGGAGCAAGAAGAACGCAAGCAC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGGCTTTAAATACCCCTTaGCTTCATGCACATGACATT +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLALNTP*LHAHDI
Trigger: AATGTCATGTGCATGAAGCAAAGGGGTATTTAAAGC...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TTGTTCTCACTTCTTTACTTGGTTACCTCCTATCTGTCCTCTAAAGTTCAGCTGTCACATCGAACATTTTaGTCCTTGTATGTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: LFSLLYLVTSYLSSKVQLSHRTF*SLYVLH
Trigger: GTGCAACACATACAAGGACAAAAATGTTCGATGTGA...CAGCTGAACTTTAGAGGACAGATAGGAGGTAACCAAGTAAAGAAGTGAGAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGCTAGAAAAAGCTTTTTaGGTCCTAGAGTATACTGGG +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWLEKAF*VLEYTG
Trigger: CCCAGTATACTCTAGGACCAAAAAAGCTTTTTCTAG...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGGAAATAAATTGTCTATaGAGTATGGCAGTCCTCCTC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWEINCL*SMAVLL
Trigger: GAGGAGGACTGCCATACTCAATAGACAATTTATTTC...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACATCCTCTCAGATTATaGGTCAGAGCGATCTTTGCT +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTHPLRL*VRAIFA
Trigger: AGCAAAGATCGCTCTGACCAATAATCTGAGAGGATG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACAGTTATGGCTGTGGGTTaGGCAAATGTCAAGTTTTGC +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTVMAVG*ANVKFC
Trigger: GCAAAACTTGACATTTGCCAAACCCACAGCCATAAC...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAGGTCCTATGCAGATTaGGTAAGACTTCTCAGGACT +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCRSYAD*VRLLRT
Trigger: AGTCCTGAGAAGTCTTACCAAATCTGCATAGGACCT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAATTTTGCCAACACATaGAGGGTCCTTGGAAGCAGA +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCNFANT*RVLGSR
Trigger: TCTGCTTCCAAGGACCCTCAATGTGTTGGCAAAATT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGACCAACCTTGGAATTTaGTCATTGTTCCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWTNLGI*SLFLKI
Trigger: GATTTTGAGGAACAATGACAAAATTCCAAGGTTGGT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTGAGGAAATACCACTTTaGGGTCTTGGCAAATGTATG +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCEEIPL*GLGKCM
Trigger: CATACATTTGCCAAGACCCAAAAGTGGTATTTCCTC...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TATGCAGATTTGGTAAGACTTCTCAGGACTGTAATGAAAGAGTTATGGCTGTGGAAATCTGTCATCTGGTaGTCTTTAGACCTATCAGTA +
Preference number: 5 (lower is better)
Translates to: YADLVRLLRTVMKELWLWKSVIW*SLDLSV
Trigger: TACTGATAGGTCTAAAGACAACCAGATGACAGATTT...CCACAGCCATAACTCTTTCATTACAGTCCTGAGAAGTCTTACCAAATCTGCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATAAAAAGTACACCCTTTaGAAGAGTAGGGTGAGGGAC +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYKKYTL*KSRVRD
Trigger: GTCCCTCACCCTACTCTTCAAAAGGGTGTACTTTTT...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGACTTAGACATACCAAAATATTGACTGTGGTTTCCCTGGTTGGAAGGATTAGAATTAGAATGGTATCTTaGGGGGAATTAACAGGAGTG +
Preference number: 5 (lower is better)
Translates to: RLRHTKILTVVSLVGRIRIRMVS*GELTGV
Trigger: CACTCCTGTTAATTCCCCCAAAGATACCATTCTAAT...TCTAATCCTTCCAACCAGGGAAACCACAGTCAATATTTTGGTATGTCTAAGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000538382.1
ENST00000635355.1
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACACAACTTTCACCAACCTaGGAATTTTGTCATTGTTCC +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTQLSPT*EFCHCS
Trigger: GGAACAATGACAAAATTCCAAGGTTGGTGAAAGTTG...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp TGCATCTGTGTGATGCTTGGTTGTTATGCTAGAACTTGTAATAGTTCTGTAACATTGTGGCCAATATCTTaGGGGCTGATTACTTTAAAG +
Preference number: 5 (lower is better)
Translates to: CICVMLGCYARTCNSSVTLWPIS*GLITLK
Trigger: CTTTAAAGTAATCAGCCCCAAAGATATTGGCCACAA...TGTTACAGAACTATTACAAGTTCTAGCATAACAACCAAGCATCACACAGATGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AAAATCTGTCATCTGGTTGTCTTTAGACCTATCAGTAGTGTCTTTAGAGGTTATGAGGAAATACCACTTTaGGGTCTTGGCAAATGTATG +
Preference number: 5 (lower is better)
Translates to: KICHLVVFRPISSVFRGYEEIPL*GLGKCM
Trigger: CATACATTTGCCAAGACCCAAAAGTGGTATTTCCTC...ATAACCTCTAAAGACACTACTGATAGGTCTAAAGACAACCAGATGACAGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCCGAACATTTTTGTCCTaGTATGTGTTGCACATGTTG +
Preference number: 5 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLRTFLS*YVLHML
Trigger: CAACATGTGCAACACATACAAGGACAAAAATGTTCG...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp ATTAATCACATCGAACATTTTTGTCCTTGTATGTGTTGCACATGTTGCTCTCTCTCACATCGAACATTTTaGTCCTTGTATGTGTTGCAC +
Preference number: 5 (lower is better)
Translates to: INHIEHFCPCMCCTCCSLSHRTF*SLYVLH
Trigger: GTGCAACACATACAAGGACAAAAATGTTCGATGTGA...GAGAGAGCAACATGTGCAACACATACAAGGACAAAAATGTTCGATGTGATTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTAAAACTTCTGATGTGTaGTTTCCCCCATATCTAAGA +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCKTSDV*FPPYLR
Trigger: TCTTAGATATGGGGGAAACAACACATCAGAAGTTTT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS-3UTR CAA 90 bp AGAAATTGTACCAAAATCTTGAACTGTGCAAAGCAGTTTCTCCAACAGCAATGTACCAACCTTGGAATTTaGTCATTGTTCCTCAAAATC +
Preference number: 5 (lower is better)
Translates to: RNCTKILNCAKQFLQQQCTNLGI*SLFLKI
Trigger: GATTTTGAGGAACAATGACAAAATTCCAAGGTTGGT...ACATTGCTGTTGGAGAAACTGCTTTGCACAGTTCAAGATTTTGGTACAATTTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS CAA 72 bp CAGACCCCGCCGCCGCTGAGGGGCTCCATACCCAGCTaGAAGCCGCCCGCACTCTCCATGCGCCGCCCGAGC +
Preference number: 6 (lower is better)
Translates to: QTPPPLRGSIPS*KPPALSMRRPS
Trigger: GCTCGGGCGGCGCATGGAGAGTGCGGGCGGCTTCAAGCTGGGTATGGAGCCCCTCAGCGGCGGCGGGGTCTG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000393567.7
ENST00000538248.5
ENST00000634268.1
ENST00000635381.2
CDS CAA 90 bp TCCAACTCACAGACCCCGCCGCCGCTGAGGGGCTCCATACCCAGCTaGAAGCCGCCCGCACTCTCCATGCGCCGCCCGAGCTGTTGCCGT +
Preference number: 6 (lower is better)
Translates to: SNSQTPPPLRGSIPS*KPPALSMRRPSCCR
Trigger: ACGGCAACAGCTCGGGCGGCGCATGGAGAGTGCGGGCGGCTTCAAGCTGGGTATGGAGCCCCTCAGCGGCGGCGGGGTCTGTGAGTTGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS CCA 72 bp AAGGGTACGCCCAGGTCCTTCTCCTTCTTCCCTTCGTaGTCCTCCTCCCCTTCCCCCTCCCAGTCGCTCCGC +
Preference number: 6 (lower is better)
Translates to: KGTPRSFSFFPS*SSSPSPSQSLR
Trigger: GCGGAGCGACTGGGAGGGGGAAGGGGAGGAGGACCACGAAGGGAAGAAGGAGAAGGACCTGGGCGTACCCTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000309900.11
ENST00000393567.7
ENST00000635131.1
ENST00000635381.2
CDS CCA 72 bp CCTGAATTCTCCCTCTCTTCCTCAAGGGCCCTAGGGTaGGAACCTTTCCTCTGTCCCCAGGGAGCATCCTGT +
Preference number: 6 (lower is better)
Translates to: PEFSLSSSRALG*EPFLCPQGASC
Trigger: ACAGGATGCTCCCTGGGGACAGAGGAAAGGTTCCCACCCTAGGGCCCTTGAGGAAGAGAGGGAGAATTCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540892.1
ENST00000634515.1
CDS GCA 72 bp CACCCTCACGCATCATCCCCACTCCCTTGCCCTTTGTaGTCCATCAATAGAGGCTGCTGGTGTTTCCTGAAT +
Preference number: 6 (lower is better)
Translates to: HPHASSPLPCPL*SINRGCWCFLN
Trigger: ATTCAGGAAACACCAGCAGCCTCTATTGATGGAGCACAAAGGGCAAGGGAGTGGGGATGATGCGTGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000540892.1
ENST00000634515.1
CDS TCA 72 bp ATGCTGCTTCTGACCTCCAGTCCTTTGCACTTGTGGTaGCTCCTCCTAGAACGCCCATACCCATCAACCCAT +
Preference number: 6 (lower is better)
Translates to: MLLLTSSPLHLW*LLLERPYPSTH
Trigger: ATGGGTTGATGGGTATGGGCGTTCTAGGAGGAGTCACCACAAGTGCAAAGGACTGGAGGTCAGAAGCAGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540892.1
ENST00000634515.1
CDS TCA 72 bp GTTAGTCTTCCGAAGGTTTCTCCAGCTTTCAGGGGCTaGAATTCAAATGAGAACGTGCCCTCGGAGTTGGCA +
Preference number: 6 (lower is better)
Translates to: VSLPKVSPAFRG*NSNENVPSELA
Trigger: TGCCAACTCCGAGGGCACGTTCTCATTTGAATTTCAGCCCCTGAAAGCTGGAGAAACCTTCGGAAGACTAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000393567.7
ENST00000635381.2
CDS TCA 72 bp CTGCTCGGTGGTCAGGGACATTTCCTTCAGGAACTCTaGGGGTGTAAGCATTCGGTTTACTTCTTCTTCTGT +
Preference number: 6 (lower is better)
Translates to: LLGGQGHFLQEL*GCKHSVYFFFC
Trigger: ACAGAAGAAGAAGTAAACCGAATGCTTACACCCTCAGAGTTCCTGAAGGAAATGTCCCTGACCACCGAGCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000288168.14
ENST00000321489.9
ENST00000393567.7
ENST00000538248.5
ENST00000539447.5
ENST00000541601.5
ENST00000634268.1
ENST00000634392.1
ENST00000634745.1
ENST00000634987.1
ENST00000635365.1
ENST00000635381.2
CDS TCA 72 bp CTTTGTGCTCCATCAATAGAGGCTGCTGGTGTTTCCTaGATCCATGATGCTGCTTCTGACCTCCAGTCCTTT +
Preference number: 6 (lower is better)
Translates to: LCAPSIEAAGVS*IHDAASDLQSF
Trigger: AAAGGACTGGAGGTCAGAAGCAGCATCATGGATTCAGGAAACACCAGCAGCCTCTATTGATGGAGCACAAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000540892.1
ENST00000634515.1
CDS CAA 90 bp CCTCTAAAGTTCAGCTGGGGAACTACCTTGTCCAGGAAGCCTTCCTaGACTCTCTTGATCTGCTTTAAATACCCCTTTGCTTCATGCACA +
Preference number: 6 (lower is better)
Translates to: PLKFSWGTTLSRKPS*TLLICFKYPFASCT
Trigger: TGTGCATGAAGCAAAGGGGTATTTAAAGCAGATCAAGAGAGTCAAGGAAGGCTTCCTGGACAAGGTAGTTCCCCAGCTGAACTTTAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000378856.8
ENST00000634869.1
CDS CAA 90 bp TTCTTCTGTAACCACCTTTGGACTCAGGGGTGGCAAAACCTTGCTTaGAAATCCTTTGAACATATTGACCAATCCCATCTGAACAGCCCC +
Preference number: 6 (lower is better)
Translates to: FFCNHLWTQGWQNLA*KSFEHIDQSHLNSP
Trigger: GGGGCTGTTCAGATGGGATTGGTCAATATGTTCAAAGGATTTCAAAGCAAGGTTTTGCCACCCCTGAGTCCAAAGGTGGTTACAGAAGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000288168.14
ENST00000321489.9
ENST00000393567.7
ENST00000538248.5
ENST00000541601.5
ENST00000634268.1
ENST00000634392.1
ENST00000634745.1
ENST00000634987.1
ENST00000635381.2
CDS CCA 72 bp GAGCTAGAGGAAATACTCCCATGTCCACACTTGGCCTaGAACAAATGGAGCCATCCACCTATATTTTTCTCT +
Preference number: 6 (lower is better)
Translates to: ELEEILPCPHLA*NKWSHPPIFFS
Trigger: AGAGAAAAATATAGGTGGATGGCTCCATTTGTTCCAGGCCAAGTGTGGACATGGGAGTATTTCCTCTAGCTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000536785.1
ENST00000538382.1
ENST00000635049.1
ENST00000635355.1
CDS CAA 72 bp AGGATTCGGAATATGGAAGGCACTCCAGGAGCCACTTaGTGGCCAATATCTTTGGGGCTGATTACTTTAAAG +
Preference number: 6 (lower is better)
Translates to: RIRNMEGTPGAT*WPISLGLITLK
Trigger: CTTTAAAGTAATCAGCCCCAAAGATATTGGCCACAAAGTGGCTCCTGGAGTGCCTTCCATATTCCGAATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000288168.14
ENST00000321489.9
ENST00000393567.7
ENST00000537789.1
ENST00000538248.5
ENST00000539447.5
ENST00000541601.5
ENST00000634268.1
ENST00000634392.1
ENST00000634745.1
ENST00000634987.1
ENST00000635365.1
ENST00000635381.2
ENST00000635596.1
CDS TCA 72 bp TCTGATGTGTTGTTTCCCCCATATCTAAGAGTTCGATaGTCTGTGGTCGGCACATCAAACGTGTTTTTGCCA +
Preference number: 6 (lower is better)
Translates to: SDVLFPPYLRVR*SVVGTSNVFLP
Trigger: TGGCAAAAACACGTTTGATGTGCCGACCACAGATCATCGAACTCTTAGATATGGGGGAAACAACACATCAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 12 transcripts:
ENST00000288168.14
ENST00000321489.9
ENST00000393567.7
ENST00000538248.5
ENST00000539447.5
ENST00000541601.5
ENST00000634268.1
ENST00000634392.1
ENST00000634745.1
ENST00000634987.1
ENST00000635365.1
ENST00000635381.2
CDS CCA 72 bp AAGCATTCGGTTTACTTCTTCTTCTGTAACCACCTTTaGACTCAGGGGTGGCAAAACCTTGCTTTGAAATCC +
Preference number: 6 (lower is better)
Translates to: KHSVYFFFCNHL*TQGWQNLALKS
Trigger: GGATTTCAAAGCAAGGTTTTGCCACCCCTGAGTCCAAAGGTGGTTACAGAAGAAGAAGTAAACCGAATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000288168.14
ENST00000321489.9
ENST00000393567.7
ENST00000538248.5
ENST00000541601.5
ENST00000634268.1
ENST00000634392.1
ENST00000634745.1
ENST00000634987.1
ENST00000635381.2
CDS CAA 72 bp AGTAAGGCGAACTTTCTTCCACAACTTTCACCAACCTaGGAATCTGCAGGGAAACACATGATGATGAACATC +
Preference number: 6 (lower is better)
Translates to: SKANFLPQLSPT*ESAGKHMMMNI
Trigger: GATGTTCATCATCATGTGTTTCCCTGCAGATTCCAAGGTTGGTGAAAGTTGTGGAAGAAAGTTCGCCTTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537789.1
ENST00000635596.1
CDS CAA 72 bp ACTGAAATCCATCAACTACTTACTAGACGTGTGACCTaGGTCAGGTCTGAACTTCAGTCTTCTCAATTTGTC +
Preference number: 6 (lower is better)
Translates to: TEIHQLLTRRVT*VRSELQSSQFV
Trigger: GACAAATTGAGAAGACTGAAGTTCAGACCTGACCAAGGTCACACGTCTAGTAAGTAGTTGATGGATTTCAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000537789.1
ENST00000635596.1
CDS TCA 72 bp GAACTCTCATCACTAATTGGCAATTACCTACTAAAGTaGAAGCTATGCACACTCTATGACCTGTGGTTCTAC +
Preference number: 6 (lower is better)
Translates to: ELSSLIGNYLLK*KLCTLYDLWFY
Trigger: GTAGAACCACAGGTCATAGAGTGTGCATAGCTTTCACTTTAGTAGGTAATTGCCAATTAGTGATGAGAGTTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000542283.1
ENST00000635582.1