RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HYAL3 (Homo sapiens)

Ensembl gene IDs: ENSG00000186792

Ensembl transcript IDs: ENST00000336307.6, ENST00000359051.7, ENST00000415204.5, ENST00000435141.1, ENST00000450982.6, ENST00000513170.1, ENST00000621157.5

Found 265 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTCCAAGGGAAGCGGGGTGTGTGCTTGGGAGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAG +
Preference number: 1 (lower is better)
Translates to: FQGKRGVCLGGLTVN*IEQEWDRVVPGLEK
Trigger: CTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCCCGCTTCCCTTGGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
3UTR-3UTR TCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCCATGGAGGACTCACATaGTCTCAGAGGGCCTCTGGT +
Preference number: 2 (lower is better)
Translates to: PICDLSMGLVRCRHKALGHGGLT*SQRASG
Trigger: ACCAGAGGCCCTCTGAGATCATGTGAGTCCTCCATG...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
3UTR-3UTR GCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCGGGAAGCGGGGTGTGTaGTTGGGAGGGTTGACTGTA +
Preference number: 2 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIGKRGV*LGGLTV
Trigger: TACAGTCAACCCTCCCAAGCACACACCCCGCTTCCC...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
3UTR-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCACTGCTTCCTTGCCATaGAGGACTCACATGATCTCA +
Preference number: 2 (lower is better)
Translates to: PICDLSMGLVRCRHKALGTASLP*RTHMIS
Trigger: TGAGATCATGTGAGTCCTCCATGGCAAGGAAGCAGT...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
3UTR-3UTR GCA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGGGGAAGCGGGGTGTGTaGTTGGGAGGGTTGACTGTA +
Preference number: 2 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKGKRGV*LGGLTV
Trigger: TACAGTCAACCCTCCCAAGCACACACCCCGCTTCCC...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
3UTR-3UTR CAA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGAAGCGGGGTGTGTGCTaGGGAGGGTTGACTGTAAAC +
Preference number: 3 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMKRGVC*GGLTVN
Trigger: GTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
3UTR TCA 72 bp AAGCGGGGTGTGTGCTTGGGAGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGA +
Preference number: 3 (lower is better)
Translates to: KRGVCLGGLTVN*IEQEWDRVVPG
Trigger: TCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGCCATGGCACCGCTGGTaGCTGCAGGCCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMPWHRW*LQAIAA
Trigger: GGCAGCGATGGCCTGCAGTCACCAGCGGTGCCATGG...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGGGCACCGCTGGTGACTaGAGGCCATCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMGTAGD*RPSLPW
Trigger: CCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCC...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCTCGGTCCGACAACGTTaGCCCCCAGCGGTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMISVRQR*PPAVRR
Trigger: CCGCCGCACCGCTGGGGGCCAACGTTGTCGGACCGA...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS-3UTR CCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGTGTTGCGGGCAAGGGTaGCTGCATGGCAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMCCGQG*LHGSGR
Trigger: CCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACA...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGGGGATGCCCCCATTGTaGGCTGTGCCCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMGMPPL*AVPLGP
Trigger: TGGACCCAGGGGCACAGCTCACAATGGGGGCATCCC...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCACCTGTGGTAGGGGCTaGCCACAACCCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGTCGRG*PQPRHR
Trigger: CCTGTGCCTGGGTTGTGGCCAGCCCCTACCACAGGT...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGGCAGCCAGTGCCAGGTaGCGGTCAAGGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMAASAR*RSRGKA
Trigger: GGCTTTGCCCCTTGACCGCCACCTGGCACTGGCTGC...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCGGCTTCCATCTGTCCTaGATCTCGCCGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGGFHLS*ISPGTA
Trigger: CGCTGTGCCCGGCGAGATCCAGGACAGATGGAAGCC...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGCCAAGCCCAAGAGGCTaGCTGATAAGCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMPSPRG*LISSAA
Trigger: CGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGG...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCGGCAGGGGATGTCGGTaGCCAACAAGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIGRGCR*PTRATR
Trigger: CCGTGTGGCCCTTGTTGGGCACCGACATCCCCTGCC...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGGCACCGCTGGTGACTaGAGGCCATCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQGTAGD*RPSLPW
Trigger: CCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAGGCACCGCTGGTGACTaGAGGCCATCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKGTAGD*RPSLPW
Trigger: CCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCC...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCATCGGTCCGACAACGTTaGCCCCCAGCGGTGCGGCGG +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAASVRQR*PPAVRR
Trigger: CCGCCGCACCGCTGGGGGCCAACGTTGTCGGACCGA...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS-3UTR CCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCGCAGCCAGTGCCAGGTaGCGGTCAAGGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIAASAR*RSRGKA
Trigger: GGCTTTGCCCCTTGACCGCCACCTGGCACTGGCTGC...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAATGTTGCGGGCAAGGGTaGCTGCATGGCAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKCCGQG*LHGSGR
Trigger: CCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACA...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCGTGGGAGGTAGATGCTaGGGAAGAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGVGGRC*GRGHWR
Trigger: CCTCCAGTGCCCTCTTCCCCAGCATCTACCTCCCAC...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAGGGATGCCCCCATTGTaGGCTGTGCCCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKGMPPL*AVPLGP
Trigger: TGGACCCAGGGGCACAGCTCACAATGGGGGCATCCC...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR TCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCCAGAGCCAATGCAGTTaGGTGTTGCGGGCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGQSQCS*VLRARV
Trigger: CACCCTTGCCCGCAACACTCAACTGCATTGGCTCTG...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGCAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMQISGV*GGHRPG
Trigger: TCCTGGCCTATGTCCGCCTCACACACCGGAGATCTG...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCTGCACGGCCCATCTGTaGCCTCTCCATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGCTAHL*PLHGLS
Trigger: ACTAAGCCCATGGAGAGGTCACAGATGGGCCGTGCA...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAGCGGGCAAGGGTGGCTaGATGGCAGCGGCCGGTATA +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKAGKGG*MAAAGI
Trigger: TATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGC...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGGCAGGGGATGTCGGTaGCCAACAAGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQGRGCR*PTRATR
Trigger: CCGTGTGGCCCTTGTTGGGCACCGACATCCCCTGCC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCCTGGGCCCAGTTGCGTaGTCATTCCCCAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGLGPVA*SFPKDG
Trigger: TCCATCCTTGGGGAATGACCACGCAACTGGGCCCAG...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAACCCCAGCACCAGGGCTaGGCCCAGTTGCGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKPQHQG*AQLRGH
Trigger: ATGACCACGCAACTGGGCCCAGCCCTGGTGCTGGGG...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGCAGCCAGTGCCAGGTaGCGGTCAAGGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQAASAR*RSRGKA
Trigger: GGCTTTGCCCCTTGACCGCCACCTGGCACTGGCTGC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCCCAATCCAGCACTGCTaGGCCAGCAAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGPIQHC*ASKARS
Trigger: AGACCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGG...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGTGTTGCGGGCAAGGGTaGCTGCATGGCAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRCCGQG*LHGSGR
Trigger: CCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACA...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATGGCTTCCATCTGTCCTaGATCTCGCCGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDGFHLS*ISPGTA
Trigger: CGCTGTGCCCGGCGAGATCCAGGACAGATGGAAGCC...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTCCATGGCACCGCTGGTaGCTGCAGGCCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSPWHRW*LQAIAA
Trigger: GGCAGCGATGGCCTGCAGTCACCAGCGGTGCCATGG...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGGCGGGCAAGGGTGGCTaGATGGCAGCGGCCGGTATA +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRAGKGG*MAAAGI
Trigger: TATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGC...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTGGCACCGCTGGTGACTaGAGGCCATCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSGTAGD*RPSLPW
Trigger: CCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCC...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGGCACCGCTGGTGACTaGAGGCCATCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSGTAGD*RPSLPW
Trigger: CCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCACCCCAGCACCAGGGCTaGGCCCAGTTGCGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAPQHQG*AQLRGH
Trigger: ATGACCACGCAACTGGGCCCAGCCCTGGTGCTGGGG...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGACCTGTGGTAGGGGCTaGCCACAACCCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQTCGRG*PQPRHR
Trigger: CCTGTGCCTGGGTTGTGGCCAGCCCCTACCACAGGT...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGGCAGCCAGTGCCAGGTaGCGGTCAAGGGGCAAAGCC +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRAASAR*RSRGKA
Trigger: GGCTTTGCCCCTTGACCGCCACCTGGCACTGGCTGC...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGCCAATCCAGCACTGCTaGGCCAGCAAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMPIQHC*ASKARS
Trigger: AGACCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGG...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAAAGCCCCAGAGTCCATaGGGCCGTAGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAKPQSP*GRSAWA
Trigger: GGCCCAGGCACTACGGCCCCATGGACTCTGGGGCTT...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR TCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCCTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMILPWSH*SHRGPR
Trigger: CCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAG...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGGGCTGGGCCCAGTTaGGTGGTCATTCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQRAGPS*VVIPQG
Trigger: TCCTTGGGGAATGACCACGCAACTGGGCCCAGCCCT...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCCCCCATTGTGAGCTGTaGCCCTGGGTCCAAAGTAGG +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIPHCEL*PWVQSR
Trigger: CCTACTTTGGACCCAGGGGCACAGCTCACAATGGGG...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGCAAAGCCTGGGGGATaGCCCCATTGTGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQAKPGG*PHCELC
Trigger: GCACAGCTCACAATGGGGGCATCCCCCAGGCTTTGC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGCCAAGCCCAAGAGGCTaGCTGATAAGCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRPSPRG*LISSAA
Trigger: CGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGG...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCGTATCCTCCATCAGTaGACGGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDRILHQ*TGRLLK
Trigger: TTTGAGCAGGCGGCCCGTGCACTGATGGAGGATACG...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCCGTATCCTCCATCAGTaGACGGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIRILHQ*TGRLLK
Trigger: TTTGAGCAGGCGGCCCGTGCACTGATGGAGGATACG...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGCACCGCTGGTGACTaGAGGCCATCGCTGCCCTGG +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTGTAGD*RPSLPW
Trigger: CCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCC...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGALALY*FFRPRP
Trigger: AGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGC...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATGGGAAGCGGGGTGTGTaGTTGGGAGGGTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDGKRGV*LGGLTV
Trigger: TACAGTCAACCCTCCCAAGCACACACCCCGCTTCCC...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAATTTTTGGGGCCCATCTaGCCGTGCACGGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKFLGPI*PCTAHL
Trigger: CAGATGGGCCGTGCACGGGCAGATGGGCCCCAAAAA...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAAGCCCCAGAGTCCATaGGGCCGTAGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSKPQSP*GRSAWA
Trigger: GGCCCAGGCACTACGGCCCCATGGACTCTGGGGCTT...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGTGTCGGACAAAGGCCTaGTGGTGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRCRTKA*WWAGGS
Trigger: GCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACA...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCATGTCGGACAAAGGCCTaGTGGTGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAACRTKA*WWAGGS
Trigger: GCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACA...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGCTTCCATCTGTCCTaGATCTCGCCGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAGFHLS*ISPGTA
Trigger: CGCTGTGCCCGGCGAGATCCAGGACAGATGGAAGCC...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCGAACCTGACTCTCCCTaGAACTGCTTCCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGEPDSP*NCFLAM
Trigger: CATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTC...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGCAGAGCCAATGCAGTTaGGTGTTGCGGGCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQQSQCS*VLRARV
Trigger: CACCCTTGCCCGCAACACTCAACTGCATTGGCTCTG...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR TCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCACAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAQISGV*GGHRPG
Trigger: TCCTGGCCTATGTCCGCCTCACACACCGGAGATCTG...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGTGCACGGCCCATCTGTaGCCTCTCCATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQCTAHL*PLHGLS
Trigger: ACTAAGCCCATGGAGAGGTCACAGATGGGCCGTGCA...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAAGGGAATACCTGCTGTaGCCAAGCCCAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKREYLL*PSPRGC
Trigger: GCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCT...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCTTGGAAGCCATACTATaGCAGCCATTGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: PICDLSMGLVRCRHKALGLEAIL*QPLPQA
Trigger: AGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAA...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATTCCAATCTCCAAGGCTaGCGTCTGGCCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDSNLQG*RLATGV
Trigger: TACACCTGTGGCCAGACGGCAGCCTTGGAGATTGGA...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGGGAAGCGGGGTGTGTaGTTGGGAGGGTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQGKRGV*LGGLTV
Trigger: TACAGTCAACCCTCCCAAGCACACACCCCGCTTCCC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATGACTCTCCCTGGAACTaGTTCCTTGCCATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDDSPWN*FLAMED
Trigger: GTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTC...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTAAGCCCCAGAGTCCATaGGGCCGTAGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTKPQSP*GRSAWA
Trigger: GGCCCAGGCACTACGGCCCCATGGACTCTGGGGCTT...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAATGTTGCGGGCAAGGGTaGCTGCATGGCAGCGGCCGG +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKCCGQG*LHGSGR
Trigger: CCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACA...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTGTCGGACAAAGGCCTaGTGGTGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSCRTKA*WWAGGS
Trigger: GCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACA...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTTGTCGGACAAAGGCCTaGTGGTGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSCRTKA*WWAGGS
Trigger: GCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACA...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGGCTTCCATCTGTCCTaGATCTCGCCGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSGFHLS*ISPGTA
Trigger: CGCTGTGCCCGGCGAGATCCAGGACAGATGGAAGCC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGCTGGTGGTGGGCAGGTaGCAGCATGTTGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRLVVGR*QHVDAG
Trigger: GCCAGCATCAACATGCTGCCACCTGCCCACCACCAG...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415204.5
ENST00000513170.1
CDS-3UTR CCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGACAAAGGCCTGGTGGTaGGCAGGTGGCAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQTKAWW*AGGSML
Trigger: CAACATGCTGCCACCTGCCCACCACCAGGCCTTTGT...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415204.5
ENST00000513170.1
CDS-3UTR TCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTCAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSQISGV*GGHRPG
Trigger: TCCTGGCCTATGTCCGCCTCACACACCGGAGATCTG...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCACTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAALPWSH*SHRGPR
Trigger: CCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAG...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGCTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRLPWSH*SHRGPR
Trigger: CCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAG...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTCCATGGCACCGCTGGTaGCTGCAGGCCATCGCTGCC +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFPWHRW*LQAIAA
Trigger: GGCAGCGATGGCCTGCAGTCACCAGCGGTGCCATGG...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGCATGGAGGACTCACATaGTCTCAGAGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQHGGLT*SQRASG
Trigger: ACCAGAGGCCCTCTGAGATCATGTGAGTCCTCCATG...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAACATGGAGGACTCACATaGTCTCAGAGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKHGGLT*SQRASG
Trigger: ACCAGAGGCCCTCTGAGATCATGTGAGTCCTCCATG...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGGGCTGGGCCCAGTTaGGTGGTCATTCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSRAGPS*VVIPQG
Trigger: TCCTTGGGGAATGACCACGCAACTGGGCCCAGCCCT...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTCTCCCAATCCAGCACTaGTGGGCCAGCAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSLPIQH*WASKAR
Trigger: CCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAG...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTCTCCCAATCCAGCACTaGTGGGCCAGCAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSLPIQH*WASKAR
Trigger: CCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAG...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCACCAAGCCCAAGAGGCTaGCTGATAAGCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAPSPRG*LISSAA
Trigger: CGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGG...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGTACTATGCCAGCCATTaGCACAGGCTGGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMYYASH*HRLGSD
Trigger: ATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTA...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGTTGGAAGCCATACTATaGCAGCCATTGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMLEAIL*QPLPQA
Trigger: AGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAA...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCGGGCAAGGGTGGCTaGATGGCAGCGGCCGGTATA +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVAGKGG*MAAAGI
Trigger: TATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGCGGGCAAGGGTGGCTaGATGGCAGCGGCCGGTATA +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKAGKGG*MAAAGI
Trigger: TATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGC...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCAATGCAGTTGAGTGTTaGGGGCAAGGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMINAVEC*GQGWLH
Trigger: ATGCAGCCACCCTTGCCCGCAACACTCAACTGCATT...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGGCAGGGGATGTCGGTaGCCAACAAGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVGRGCR*PTRATR
Trigger: CCGTGTGGCCCTTGTTGGGCACCGACATCCCCTGCC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAATCCAATCTCCAAGGCTaGCGTCTGGCCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKSNLQG*RLATGV
Trigger: TACACCTGTGGCCAGACGGCAGCCTTGGAGATTGGA...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGACTCTCCCTGGAACTaGTTCCTTGCCATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQDSPWN*FLAMED
Trigger: GTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAGACTCTCCCTGGAACTaGTTCCTTGCCATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKDSPWN*FLAMED
Trigger: GTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTC...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTTTTTTGGGGCCCATCTaGCCGTGCACGGCCCATCTG +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSFLGPI*PCTAHL
Trigger: CAGATGGGCCGTGCACGGGCAGATGGGCCCCAAAAA...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGTTGATGCTGGCCTCTaGGATGTTCCGCGTCCTAGC +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAVDAGL*DVPRPS
Trigger: GCTAGGACGCGGAACATCCCAGAGGCCAGCATCAAC...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS-3UTR CCA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGCCCCAGCACCAGGGCTaGGCCCAGTTGCGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKPQHQG*AQLRGH
Trigger: ATGACCACGCAACTGGGCCCAGCCCTGGTGCTGGGG...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTACCTGTGGTAGGGGCTaGCCACAACCCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTTCGRG*PQPRHR
Trigger: CCTGTGCCTGGGTTGTGGCCAGCCCCTACCACAGGT...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAACCTGTGGTAGGGGCTaGCCACAACCCAGGCACAGG +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVATCGRG*PQPRHR
Trigger: CCTGTGCCTGGGTTGTGGCCAGCCCCTACCACAGGT...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGAAGCCCCAGAGTCCATaGGGCCGTAGTGCCTGGGCC +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVKPQSP*GRSAWA
Trigger: GGCCCAGGCACTACGGCCCCATGGACTCTGGGGCTT...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAGCCATTGCCACAGGCTaGGTAGTGATAGAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKAIATG*VVIEAP
Trigger: TGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGC...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGTGGGAGGTAGATGCTaGGGAAGAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSVGGRC*GRGHWR
Trigger: CCTCCAGTGCCCTCTTCCCCAGCATCTACCTCCCAC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTTGTCGGACAAAGGCCTaGTGGTGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTCRTKA*WWAGGS
Trigger: GCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACA...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGGCTTCCATCTGTCCTaGATCTCGCCGGGCACAGCG +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAGFHLS*ISPGTA
Trigger: CGCTGTGCCCGGCGAGATCCAGGACAGATGGAAGCC...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGTGCCAGCACTCCTCCTaGGACAGGAACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRCQHSS*DRNLPD
Trigger: ATCTGGGAGGTTCCTGTCCCAGGAGGAGTGCTGGCA...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359051.7
ENST00000450982.6
ENST00000513170.1
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACAAAGGCCTGGTGGTaGGCAGGTGGCAGCATGTTG +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRTKAWW*AGGSML
Trigger: CAACATGCTGCCACCTGCCCACCACCAGGCCTTTGT...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000415204.5
ENST00000513170.1
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGGCCTCACAGTGTGCTaGGGGTACATTCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSGLTVC*GYIPQH
Trigger: GTGCTGTGGAATGTACCCTCAGCACACTGTGAGGCC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR TCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTGGCCTCACAGTGTGCTaGGGGTACATTCCACAGCAC +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSGLTVC*GYIPQH
Trigger: GTGCTGTGGAATGTACCCTCAGCACACTGTGAGGCC...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR TCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTGGGATGCCCCCATTGTaGGCTGTGCCCCTGGGTCCA +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFGMPPL*AVPLGP
Trigger: TGGACCCAGGGGCACAGCTCACAATGGGGGCATCCC...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMGLTVN*IEQEWD
Trigger: GTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCC...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTAGGGCTGGGCCCAGTTaGGTGGTCATTCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTRAGPS*VVIPQG
Trigger: TCCTTGGGGAATGACCACGCAACTGGGCCCAGCCCT...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAAAGCCTGGGGGATaGCCCCATTGTGAGCTGTGC +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAAKPGG*PHCELC
Trigger: GCACAGCTCACAATGGGGGCATCCCCCAGGCTTTGC...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACCAAGCCCAAGAGGCTaGCTGATAAGCTCGGCGGCG +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKPSPRG*LISSAA
Trigger: CGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTAGGGAATACCTGCTGTaGCCAAGCCCAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSREYLL*PSPRGC
Trigger: GCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCT...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGGGAATACCTGCTGTaGCCAAGCCCAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSREYLL*PSPRGC
Trigger: GCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCT...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTCGTATCCTCCATCAGTaGACGGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSRILHQ*TGRLLK
Trigger: TTTGAGCAGGCGGCCCGTGCACTGATGGAGGATACG...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTGGCAGGGGATGTCGGTaGCCAACAAGGGCCACACGG +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFGRGCR*PTRATR
Trigger: CCGTGTGGCCCTTGTTGGGCACCGACATCCCCTGCC...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAACTCACACCAATGGACTaGACAAGGTCATCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKLTPMD*TRSSWD
Trigger: GTCCCAGGATGACCTTGTGCAGTCCATTGGTGTGAG...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCATCCAATCTCCAAGGCTaGCGTCTGGCCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAASNLQG*RLATGV
Trigger: TACACCTGTGGCCAGACGGCAGCCTTGGAGATTGGA...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGTCCAATCTCCAAGGCTaGCGTCTGGCCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRSNLQG*RLATGV
Trigger: TACACCTGTGGCCAGACGGCAGCCTTGGAGATTGGA...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQALALY*FFRPRP
Trigger: AGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGGGAAGCGGGGTGTGTaGTTGGGAGGGTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSGKRGV*LGGLTV
Trigger: TACAGTCAACCCTCCCAAGCACACACCCCGCTTCCC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTCTAGCTCCGCACAGCTaGGTATCTCACTCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSLAPHS*VSHSVA
Trigger: GGCGACTGAGTGAGATACCCAGCTGTGCGGAGCTAG...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS-3UTR CCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTCCCCAGCACCAGGGCTaGGCCCAGTTGCGTGGTCAT +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFPQHQG*AQLRGH
Trigger: ATGACCACGCAACTGGGCCCAGCCCTGGTGCTGGGG...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTCCAATCCAGCACTGCTaGGCCAGCAAAGCCAGGTCT +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSPIQHC*ASKARS
Trigger: AGACCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGG...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGCCATTGCCACAGGCTaGGTAGTGATAGAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAAIATG*VVIEAP
Trigger: TGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGC...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAAGCGGCCGGTATAGTTaGAAGCCATACTATGCCAGC +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKSGRYS*KPYYAS
Trigger: GCTGGCATAGTATGGCTTCCAACTATACCGGCCGCT...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGTGGGAGGTAGATGCTaGGGAAGAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAVGGRC*GRGHWR
Trigger: CCTCCAGTGCCCTCTTCCCCAGCATCTACCTCCCAC...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGTGTCGGACAAAGGCCTaGTGGTGGGCAGGTGGCAGC +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVCRTKA*WWAGGS
Trigger: GCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACA...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGAACCTGACTCTCCCTaGAACTGCTTCCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQEPDSP*NCFLAM
Trigger: CATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAGTCATTCCCCAAGGATaGAAACCTGCATCAGCCACC +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKVIPQG*KPASAT
Trigger: GGTGGCTGATGCAGGTTTCCATCCTTGGGGAATGAC...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000359051.7
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTTGCCAGCACTCCTCCTaGGACAGGAACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSCQHSS*DRNLPD
Trigger: ATCTGGGAGGTTCCTGTCCCAGGAGGAGTGCTGGCA...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000359051.7
ENST00000450982.6
ENST00000513170.1
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCACTGGTGGTGGGCAGGTaGCAGCATGTTGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVALVVGR*QHVDAG
Trigger: GCCAGCATCAACATGCTGCCACCTGCCCACCACCAG...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000415204.5
ENST00000513170.1
CDS-3UTR TCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGA +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKQISGV*GGHRPG
Trigger: TCCTGGCCTATGTCCGCCTCACACACCGGAGATCTG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCACTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVALPWSH*SHRGPR
Trigger: CCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAG...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTCTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTLPWSH*SHRGPR
Trigger: CCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAG...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATAGTAACAGTGGCAGCTaGAGGACTTCCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDSNSGS*RTSNLQ
Trigger: TTGGAGATTGGAAGTCCTTCAGCTGCCACTGTTACT...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIGLTVN*IEQEWD
Trigger: GTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCC...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTCATGGAGGACTCACATaGTCTCAGAGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSHGGLT*SQRASG
Trigger: ACCAGAGGCCCTCTGAGATCATGTGAGTCCTCCATG...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGAGGGCTGGGCCCAGTTaGGTGGTCATTCCCCAAGGA +
Preference number: 4 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKRAGPS*VVIPQG
Trigger: TCCTTGGGGAATGACCACGCAACTGGGCCCAGCCCT...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGCTCCCAATCCAGCACTaGTGGGCCAGCAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVLPIQH*WASKAR
Trigger: CCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAG...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACTCCCAATCCAGCACTaGTGGGCCAGCAAAGCCAGG +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLPIQH*WASKAR
Trigger: CCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTAGGGAATACCTGCTGTaGCCAAGCCCAAGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTREYLL*PSPRGC
Trigger: GCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCT...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTCGTATCCTCCATCAGTaGACGGGCCGCCTGCTCAAA +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTRILHQ*TGRLLK
Trigger: TTTGAGCAGGCGGCCCGTGCACTGATGGAGGATACG...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAATACTATGCCAGCCATTaGCACAGGCTGGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKYYASH*HRLGSD
Trigger: ATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTA...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTTCCAATCTCCAAGGCTaGCGTCTGGCCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSSNLQG*RLATGV
Trigger: TACACCTGTGGCCAGACGGCAGCCTTGGAGATTGGA...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAATCTCCAAGGCTaGCGTCTGGCCACAGGTGTA +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSSNLQG*RLATGV
Trigger: TACACCTGTGGCCAGACGGCAGCCTTGGAGATTGGA...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGGAAGCGGGGTGTGTaGTTGGGAGGGTTGACTGTA +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTGKRGV*LGGLTV
Trigger: TACAGTCAACCCTCCCAAGCACACACCCCGCTTCCC...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATGTCATTCCCCAAGGATaGAAACATGTTGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDVIPQG*KHVDAG
Trigger: GCCAGCATCAACATGTTTCCATCCTTGGGGAATGAC...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000336307.6
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCACTGGGCCCAGTTGCGTaGTCATTCCCCAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVALGPVA*SFPKDG
Trigger: TCCATCCTTGGGGAATGACCACGCAACTGGGCCCAG...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGTGGGAGGTAGATGCTaGGGAAGAGGGCACTGGAGG +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVVGGRC*GRGHWR
Trigger: CCTCCAGTGCCCTCTTCCCCAGCATCTACCTCCCAC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCATGCACAAGGTCATCCTaGGACAGGAACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAACTRSS*DRNLPD
Trigger: ATCTGGGAGGTTCCTGTCCCAGGATGACCTTGTGCA...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGCAGTGGCAGGGGCCCTaGCTTTATACTGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQQWQGP*LYTASL
Trigger: TAAAGAAGCAGTATAAAGCCAGGGCCCCTGCCACTG...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATACTGCTTCCTTGCCATaGAGGACTCACATGATCTCA +
Preference number: 4 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDTASLP*RTHMIS
Trigger: TGAGATCATGTGAGTCCTCCATGGCAAGGAAGCAGT...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGGAACCTGACTCTCCCTaGAACTGCTTCCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSREPDSP*NCFLAM
Trigger: CATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTC...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGCAGAGCCAATGCAGTTaGGTGTTGCGGGCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVQSQCS*VLRARV
Trigger: CACCCTTGCCCGCAACACTCAACTGCATTGGCTCTG...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR TCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGG +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLPWSH*SHRGPR
Trigger: CCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQGLTVN*IEQEWD
Trigger: GTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGTGCACGGCCCATCTGTaGCCTCTCCATGGGCTTAGT +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVCTAHL*PLHGLS
Trigger: ACTAAGCCCATGGAGAGGTCACAGATGGGCCGTGCA...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACAGGTGGCAGCATGTTaGTGCTGGCCTCTGGGATGT +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKQVAAC*CWPLGC
Trigger: ACATCCCAGAGGCCAGCATCAACATGCTGCCACCTG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415204.5
CDS-3UTR GCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTCTCACACCAATGGACTaGACAAGGTCATCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSLTPMD*TRSSWD
Trigger: GTCCCAGGATGACCTTGTGCAGTCCATTGGTGTGAG...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSALALY*FFRPRP
Trigger: AGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACTAGCTCCGCACAGCTaGGTATCTCACTCAGTCGCC +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLAPHS*VSHSVA
Trigger: GGCGACTGAGTGAGATACCCAGCTGTGCGGAGCTAG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS-3UTR CCA 90 bp GGGTGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGGTCATTCCCCAAGGATaGAAACATGTTGATGCTGGC +
Preference number: 4 (lower is better)
Translates to: GCVLGRVDCKLNRARVGQVIPQG*KHVDAG
Trigger: GCCAGCATCAACATGTTTCCATCCTTGGGGAATGAC...CTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000450982.6
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGCTGGGCCCAGTTGCGTaGTCATTCCCCAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVLGPVA*SFPKDG
Trigger: TCCATCCTTGGGGAATGACCACGCAACTGGGCCCAG...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACTGGGCCCAGTTGCGTaGTCATTCCCCAAGGATGGA +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLGPVA*SFPKDG
Trigger: TCCATCCTTGGGGAATGACCACGCAACTGGGCCCAG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGCCATTGCCACAGGCTaGGTAGTGATAGAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTAIATG*VVIEAP
Trigger: TGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGC...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGCGGCCGGTATAGTTaGAAGCCATACTATGCCAGC +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSSGRYS*KPYYAS
Trigger: GCTGGCATAGTATGGCTTCCAACTATACCGGCCGCT...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTAGCGGCCGGTATAGTTaGAAGCCATACTATGCCAGC +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSSGRYS*KPYYAS
Trigger: GCTGGCATAGTATGGCTTCCAACTATACCGGCCGCT...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAAACTGCTTCCTTGCCATaGAGGACTCACATGATCTCA +
Preference number: 4 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKTASLP*RTHMIS
Trigger: TGAGATCATGTGAGTCCTCCATGGCAAGGAAGCAGT...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAATGCCAGCACTCCTCCTaGGACAGGAACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKCQHSS*DRNLPD
Trigger: ATCTGGGAGGTTCCTGTCCCAGGAGGAGTGCTGGCA...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359051.7
ENST00000450982.6
ENST00000513170.1
CDS-3UTR TCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTCAGAGCCAATGCAGTTaGGTGTTGCGGGCAAGGGTG +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFQSQCS*VLRARV
Trigger: CACCCTTGCCCGCAACACTCAACTGCATTGGCTCTG...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR TCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGAGTAACAGTGGCAGCTaGAGGACTTCCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRSNSGS*RTSNLQ
Trigger: TTGGAGATTGGAAGTCCTTCAGCTGCCACTGTTACT...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTTACTATGCCAGCCATTaGCACAGGCTGGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSYYASH*HRLGSD
Trigger: ATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTA...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAALALY*FFRPRP
Trigger: AGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGC...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGGACTCTCCCTGGAACTaGTTCCTTGCCATGGAGGAC +
Preference number: 4 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKDSPWN*FLAMED
Trigger: GTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTC...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCCATTGCCACAGGCTaGGTAGTGATAGAAGCCCCA +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVAIATG*VVIEAP
Trigger: TGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTCTGCACTCACACCAATaGACTGCACAAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSLHSHQ*TAQGHP
Trigger: AGGATGACCTTGTGCAGTCCATTGGTGTGAGTGCAG...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTCAGTGGCAGGGGCCCTaGCTTTATACTGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSQWQGP*LYTASL
Trigger: TAAAGAAGCAGTATAAAGCCAGGGCCCCTGCCACTG...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTCAGTGGCAGGGGCCCTaGCTTTATACTGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSQWQGP*LYTASL
Trigger: TAAAGAAGCAGTATAAAGCCAGGGCCCCTGCCACTG...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGCTTCCTTGCCATaGAGGACTCACATGATCTCA +
Preference number: 4 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRTASLP*RTHMIS
Trigger: TGAGATCATGTGAGTCCTCCATGGCAAGGAAGCAGT...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTCATGGAGGACTCACATaGTCTCAGAGGGCCTCTGGT +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFHGGLT*SQRASG
Trigger: ACCAGAGGCCCTCTGAGATCATGTGAGTCCTCCATG...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTTTGGAAGCCATACTATaGCAGCCATTGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTLEAIL*QPLPQA
Trigger: AGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAA...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGAATGCAGTTGAGTGTTaGGGGCAAGGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVNAVEC*GQGWLH
Trigger: ATGCAGCCACCCTTGCCCGCAACACTCAACTGCATT...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGAATGCAGTTGAGTGTTaGGGGCAAGGGTGGCTGCAT +
Preference number: 4 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKNAVEC*GQGWLH
Trigger: ATGCAGCCACCCTTGCCCGCAACACTCAACTGCATT...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVALALY*FFRPRP
Trigger: AGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGTTTATGATGAAAGAGTaGAGACAACAGCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMFMMKE*RQQLST
Trigger: AGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTCCAAGGATGGAAACCTaGATCAGCCACCTCTGCAGC +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFPRMET*ISHLCS
Trigger: GCTGCAGAGGTGGCTGATGCAGGTTTCCATCCTTGG...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000359051.7
CDS-3UTR CCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAAGCGGCCGGTATAGTTaGAAGCCATACTATGCCAGC +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKSGRYS*KPYYAS
Trigger: GCTGGCATAGTATGGCTTCCAACTATACCGGCCGCT...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCACAGTGGCAGGGGCCCTaGCTTTATACTGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAQWQGP*LYTASL
Trigger: TAAAGAAGCAGTATAAAGCCAGGGCCCCTGCCACTG...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGAACCTGACTCTCCCTaGAACTGCTTCCTTGCCATG +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVEPDSP*NCFLAM
Trigger: CATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAAGTAACAGTGGCAGCTaGAGGACTTCCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVASNSGS*RTSNLQ
Trigger: TTGGAGATTGGAAGTCCTTCAGCTGCCACTGTTACT...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAATTGGAAGCCATACTATaGCAGCCATTGCCACAGGCT +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLEAIL*QPLPQA
Trigger: AGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAA...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCT +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFALALY*FFRPRP
Trigger: AGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGC...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTTGCACAAGGTCATCCTaGGACAGGAACCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFCTRSS*DRNLPD
Trigger: ATCTGGGAGGTTCCTGTCCCAGGATGACCTTGTGCA...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGCTGCACTCACACCAATaGACTGCACAAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVLHSHQ*TAQGHP
Trigger: AGGATGACCTTGTGCAGTCCATTGGTGTGAGTGCAG...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGCAGTGGCAGGGGCCCTaGCTTTATACTGCTTCTTTA +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVQWQGP*LYTASL
Trigger: TAAAGAAGCAGTATAAAGCCAGGGCCCCTGCCACTG...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGAGTAACAGTGGCAGCTaGAGGACTTCCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVSNSGS*RTSNLQ
Trigger: TTGGAGATTGGAAGTCCTTCAGCTGCCACTGTTACT...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVGLTVN*IEQEWD
Trigger: GTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCC...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR TCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGGGTTGACTGTAAACTaGATAGAGCAAGAGTGGGAC +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKGLTVN*IEQEWD
Trigger: GTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCC...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR GCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTTACTATGCCAGCCATTaGCACAGGCTGGGTAGTGAT +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFYYASH*HRLGSD
Trigger: ATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTA...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTCTGCACTCACACCAATaGACTGCACAAGGTCATCCT +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFLHSHQ*TAQGHP
Trigger: AGGATGACCTTGTGCAGTCCATTGGTGTGAGTGCAG...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000621157.5
CDS-3UTR CCA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAACTGCTTCCTTGCCATaGAGGACTCACATGATCTCA +
Preference number: 4 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKTASLP*RTHMIS
Trigger: TGAGATCATGTGAGTCCTCCATGGCAAGGAAGCAGT...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR TCA 90 bp ATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGATTTTTAGTAACAGTGGCAGCTaGAGGACTTCCAATCTCCAA +
Preference number: 4 (lower is better)
Translates to: MKECRQQLSTLPTFAKIFSNSGS*RTSNLQ
Trigger: TTGGAGATTGGAAGTCCTTCAGCTGCCACTGTTACT...AAAAATCTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR GCA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCATTTATGATGAAAGAGTaGAGACAACAGCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAFMMKE*RQQLST
Trigger: AGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp TGTGTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTGGTTCTTGTAGAAAATaGTCATGTTCTGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: CVLGRVDCKLNRARVGQSGSCRK*SCSDRE
Trigger: TTCACGGTCAGAACATGACCATTTTCTACAAGAACC...ACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CCA 90 bp AAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGGTTCTTGTAGAAAATaGTCATGTTCTGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: KLNRARVGQSSSRTGKVAGSCRK*SCSDRE
Trigger: TTCACGGTCAGAACATGACCATTTTCTACAAGAACC...TGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR GCA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTTTTATGATGAAAGAGTaGAGACAACAGCTTAGCACT +
Preference number: 4 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTFMMKE*RQQLST
Trigger: AGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CCA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGGGTTCTTGTAGAAAATaGTCATGTTCTGACCGTGAA +
Preference number: 4 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKGSCRK*SCSDRE
Trigger: TTCACGGTCAGAACATGACCATTTTCTACAAGAACC...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS GCA 90 bp GTTGGCCCCCAGCGGTGCGGCGGATGTTCTGCAGCCGTCGCGTCCTaGGGCACGCCACGGCGTTCTAAGGCCTCCCAGCACCCGCGCGTC +
Preference number: 5 (lower is better)
Translates to: VGPQRCGGCSAAVAS*GTPRRSKASQHPRV
Trigger: GACGCGCGGGTGCTGGGAGGCCTTAGAACGCCGTGGCGTGCCGCAGGACGCGACGGCTGCAGAACATCCGCCGCACCGCTGGGGGCCAAC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS CCA 90 bp GGCTGCCTGATAAGCTCGGCGGCGGCCCCAGTTCCCAGCCCAGAGTaGACACCACTCCTCCCAATCCAGCACTGCTGGGCCAGCAAAGCC +
Preference number: 5 (lower is better)
Translates to: GCLISSAAAPVPSPE*TPLLPIQHCWASKA
Trigger: GGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAGGAGTGGTGTCCACTCTGGGCTGGGAACTGGGGCCGCCGCCGAGCTTATCAGGCAGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000435141.1
ENST00000450982.6
ENST00000621157.5
CDS GCA 90 bp AGGGTCCAGGTCAGGGAATACCTGCTGTGCCCAAGCCCAAGAGGCTaGCTGATAAGCTCGGCGGCGGCCCCAGTTCCCAGCCCAGAGTGG +
Preference number: 5 (lower is better)
Translates to: RVQVREYLLCPSPRG*LISSAAAPVPSPEW
Trigger: CCACTCTGGGCTGGGAACTGGGGCCGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCTGACCTGGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS TCA 90 bp GCCAGCACTCCTCCTGGGACAGGAACCTCCCAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGACAGGCAGGGGATGTCGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: ASTPPGTGTSQISGV*GGHRPGQAGDVGAQ
Trigger: TTGGGCACCGACATCCCCTGCCTGTCCTGGCCTATGTCCGCCTCACACACCGGAGATCTGGGAGGTTCCTGTCCCAGGAGGAGTGCTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359051.7
ENST00000450982.6
ENST00000513170.1
CDS GCA 90 bp ACAGCGCCCGTGGCCATGGCACCGCTGGTGACTGCAGGCCATCGCTaGCCTGGTCACATTGATCACATAGGGGCCCAAGGTGTCCACCAG +
Preference number: 5 (lower is better)
Translates to: TAPVAMAPLVTAGHR*PGHIDHIGAQGVHQ
Trigger: CTGGTGGACACCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCCATGGCCACGGGCGCTGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS GCA 90 bp CTTGTAGAGCTGCTCCTGAGGGTCCAGGTCAGGGAATACCTGCTGTaGCCAAGCCCAAGAGGCTGCCTGATAAGCTCGGCGGCGGCCCCA +
Preference number: 5 (lower is better)
Translates to: LVELLLRVQVREYLL*PSPRGCLISSAAAP
Trigger: TGGGGCCGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCTGACCTGGACCCTCAGGAGCAGCTCTACAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS GCA 90 bp GGAAGAGGGCACTGGAGGCGGCCCAGAGCCAATGCAGTTGAGTGTTaGGGGCAAGGGTGGCTGCATGGCAGCGGCCGGTATAGTTGGAAG +
Preference number: 5 (lower is better)
Translates to: GRGHWRRPRANAVEC*GQGWLHGSGRYSWK
Trigger: CTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGGCCGCCTCCAGTGCCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGCTCGGTCCGACAACGTaGGCCCCCAGCGGTGCGGCG +
Preference number: 5 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMLGPTT*APSGAA
Trigger: CGCCGCACCGCTGGGGGCCAACGTTGTCGGACCGAG...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS TCA 90 bp GCACAAGGTCATCCTGGGACAGGAACCTCCCAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGACAGGCAGGGGATGTCGGTGCCCAA +
Preference number: 5 (lower is better)
Translates to: AQGHPGTGTSQISGV*GGHRPGQAGDVGAQ
Trigger: TTGGGCACCGACATCCCCTGCCTGTCCTGGCCTATGTCCGCCTCACACACCGGAGATCTGGGAGGTTCCTGTCCCAGGATGACCTTGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS GCA 90 bp GGCGGCCCAGAGCCAATGCAGTTGAGTGTTGCGGGCAAGGGTGGCTaGATGGCAGCGGCCGGTATAGTTGGAAGCCATACTATGCCAGCC +
Preference number: 5 (lower is better)
Translates to: GGPEPMQLSVAGKGG*MAAAGIVGSHTMPA
Trigger: GGCTGGCATAGTATGGCTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGGCCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS GCA 90 bp CCAGTTCCCAGCCCAGAGTGGACACCACTCCTCCCAATCCAGCACTaGTGGGCCAGCAAAGCCAGGTCTCAGGCTGTGGTGGATCTGGTA +
Preference number: 5 (lower is better)
Translates to: PVPSPEWTPLLPIQH*WASKARSQAVVDLV
Trigger: TACCAGATCCACCACAGCCTGAGACCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAGGAGTGGTGTCCACTCTGGGCTGGGAACTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000435141.1
ENST00000450982.6
ENST00000621157.5
CDS CCA 90 bp TGGAGGCGGCCCAGAGCCAATGCAGTTGAGTGTTGCGGGCAAGGGTaGCTGCATGGCAGCGGCCGGTATAGTTGGAAGCCATACTATGCC +
Preference number: 5 (lower is better)
Translates to: WRRPRANAVECCGQG*LHGSGRYSWKPYYA
Trigger: GGCATAGTATGGCTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGGCCGCCTCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS TCA 90 bp CATGGCACCGCTGGTGACTGCAGGCCATCGCTGCCCTGGTCACATTaGTCACATAGGGGCCCAAGGTGTCCACCAGGTAGTCATGGAGAT +
Preference number: 5 (lower is better)
Translates to: HGTAGDCRPSLPWSH*SHRGPRCPPGSHGD
Trigger: ATCTCCATGACTACCTGGTGGACACCTTGGGCCCCTATGTGATCAATGTGACCAGGGCAGCGATGGCCTGCAGTCACCAGCGGTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS GCA 90 bp CATGGCAGCGGCCGGTATAGTTGGAAGCCATACTATGCCAGCCATTaGCACAGGCTGGGTAGTGATAGAAGCCCCAGAGTCCATGGGGCC +
Preference number: 5 (lower is better)
Translates to: HGSGRYSWKPYYASH*HRLGSDRSPRVHGA
Trigger: GGCCCCATGGACTCTGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAACTATACCGGCCGCTGCCATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS CCA 90 bp GAGTGTTGCGGGCAAGGGTGGCTGCATGGCAGCGGCCGGTATAGTTaGAAGCCATACTATGCCAGCCATTGCCACAGGCTGGGTAGTGAT +
Preference number: 5 (lower is better)
Translates to: ECCGQGWLHGSGRYS*KPYYASHCHRLGSD
Trigger: ATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp GAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGAAAACAGGGCTGGGCCCAGTaGCGTGGTCATTCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: EQEWDRVVPGLEKWQQGKQGWAQ*RGHSPR
Trigger: CCTTGGGGAATGACCACGCAACTGGGCCCAGCCCTG...TTTTCCCTGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCCTTCGCCAAGATTTTTaGGGGCCCATCTGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: PICDLSMGLVRCRHKALGLRQDF*GPICPC
Trigger: GCACGGGCAGATGGGCCCCAAAAAATCTTGGCGAAG...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACTCGGTCCGACAACGTaGGCCCCCAGCGGTGCGGCG +
Preference number: 5 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLGPTT*APSGAA
Trigger: CGCCGCACCGCTGGGGGCCAACGTTGTCGGACCGAG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000336307.6
ENST00000415204.5
CDS-3UTR CAA 90 bp CCCATCTGTGACCTCTCCATGGGCTTAGTGAGGTGTAGGCACAAAGCCCTAGGCAAGCGGGGTGTGTGCTaGGGAGGGTTGACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: PICDLSMGLVRCRHKALGKRGVC*GGLTVN
Trigger: GTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT...GCCTAGGGCTTTGTGCCTACACCTCACTAAGCCCATGGAGAGGTCACAGATGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGCTTCGCCAAGATTTTTaGGGGCCCATCTGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMLRQDF*GPICPC
Trigger: GCACGGGCAGATGGGCCCCAAAAAATCTTGGCGAAG...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCCCAGAGCCAATGCAGTaGAGTGTTGCGGGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIPEPMQ*SVAGKG
Trigger: ACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGG...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTCAGGGCTGGGCCCAGTaGCGTGGTCATTCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTQGWAQ*RGHSPR
Trigger: CCTTGGGGAATGACCACGCAACTGGGCCCAGCCCTG...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp CTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATAAATGCTGGCCACGGTaGGCTATGATGCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: LEPDSPWNCFLAMEDSHDKCWPR*AMMPRA
Trigger: TGCTCTGGGCATCATAGCCAACCGTGGCCAGCATTT...ATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCAAGCGGGGTGTGTGCTaGGGAGGGTTGACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIKRGVC*GGLTVN
Trigger: GTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000621157.5
CDS-3UTR CAA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGCAGGTGGCAGCATGTaGATGCTGGCCTCTGGGATG +
Preference number: 5 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAAGGSM*MLASGM
Trigger: CATCCCAGAGGCCAGCATCAACATGCTGCCACCTGC...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415204.5
CDS-3UTR CAA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGCAGGGCTGGGCCCAGTaGCGTGGTCATTCCCCAAGG +
Preference number: 5 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVQGWAQ*RGHSPR
Trigger: CCTTGGGGAATGACCACGCAACTGGGCCCAGCCCTG...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp GGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGAAATGCTGGCCACGGTaGGCTATGATGCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: GRVDCKLNRARVGQSSSRKCWPR*AMMPRA
Trigger: TGCTCTGGGCATCATAGCCAACCGTGGCCAGCATTT...CCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp AGCTGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGGGGATAGAGGCCGAGTaGGTTCTTGTAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: SWNLTLPGTASLPWRTHMGIEAE*VLVENG
Trigger: ACCATTTTCTACAAGAACCAACTCGGCCTCTATCCC...CATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCAGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAAAGCGGGGTGTGTGCTaGGGAGGGTTGACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAKRGVC*GGLTVN
Trigger: GTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CAA 90 bp TGGAACCTGACTCTCCCTGGAACTGCTTCCTTGCCATGGAGGACTCACATGATCGGGATAGAGGCCGAGTaGGTTCTTGTAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: WNLTLPGTASLPWRTHMIGIEAE*VLVENG
Trigger: ACCATTTTCTACAAGAACCAACTCGGCCTCTATCCC...GATCATGTGAGTCCTCCATGGCAAGGAAGCAGTTCCAGGGAGAGTCAGGTTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTCCAGAGCCAATGCAGTaGAGTGTTGCGGGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTPEPMQ*SVAGKG
Trigger: ACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGG...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp GTGCTTGGGAGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTAAGCGGGGTGTGTGCTaGGGAGGGTTGACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: VLGRVDCKLNRARVGQSSKRGVC*GGLTVN
Trigger: GTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT...ACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCTCCCAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CAA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGCCAGAGCCAATGCAGTaGAGTGTTGCGGGCAAGGGT +
Preference number: 5 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKPEPMQ*SVAGKG
Trigger: ACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGG...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTAAGCGGGGTGTGTGCTaGGGAGGGTTGACTGTAAAC +
Preference number: 5 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTKRGVC*GGLTVN
Trigger: GTTTACAGTCAACCCTCCCAAGCACACACCCCGCTT...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS-3UTR CAA 90 bp GACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAACTTCGCCAAGATTTTTaGGGGCCCATCTGCCCGTGC +
Preference number: 5 (lower is better)
Translates to: DCKLNRARVGQSSSRTGKLRQDF*GPICPC
Trigger: GCACGGGCAGATGGGCCCCAAAAAATCTTGGCGAAG...TTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp TTTATGATGAAAGAGTGCAGACAACAGCTTAGCACTTTACCGACCTTCGCCAAGAAATGCTGGCCACGGTaGGCTATGATGCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: FMMKECRQQLSTLPTFAKKCWPR*AMMPRA
Trigger: TGCTCTGGGCATCATAGCCAACCGTGGCCAGCATTT...CTTGGCGAAGGTCGGTAAAGTGCTAAGCTGTTGTCTGCACTCTTTCATCATAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000621157.5
CDS-3UTR CAA 90 bp TGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGAAATGCTGGCCACGGTaGGCTATGATGCCCAGAGCA +
Preference number: 5 (lower is better)
Translates to: CKLNRARVGQSSSRTGKVKCWPR*AMMPRA
Trigger: TGCTCTGGGCATCATAGCCAACCGTGGCCAGCATTT...CACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp CTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGAAAAGTGGCAGCAGGGATAGAGGCCGAGTaGGTTCTTGTAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: LNRARVGQSSSRTGKVAAGIEAE*VLVENG
Trigger: ACCATTTTCTACAAGAACCAACTCGGCCTCTATCCC...TGCTGCCACTTTTCCAGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS-3UTR CAA 90 bp AGGGTTGACTGTAAACTGAATAGAGCAAGAGTGGGACAGAGTAGTTCCAGGACTGGGATAGAGGCCGAGTaGGTTCTTGTAGAAAATGGT +
Preference number: 5 (lower is better)
Translates to: RVDCKLNRARVGQSSSRTGIEAE*VLVENG
Trigger: ACCATTTTCTACAAGAACCAACTCGGCCTCTATCCC...AGTCCTGGAACTACTCTGTCCCACTCTTGCTCTATTCAGTTTACAGTCAACCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS GCA 72 bp GTCAGGGAATACCTGCTGTGCCCAAGCCCAAGAGGCTaGCTGATAAGCTCGGCGGCGGCCCCAGTTCCCAGC +
Preference number: 6 (lower is better)
Translates to: VREYLLCPSPRG*LISSAAAPVPS
Trigger: GCTGGGAACTGGGGCCGCCGCCGAGCTTATCAGGCAGCCTCTTGGGCTTGGGCACAGCAGGTATTCCCTGAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000435141.1
ENST00000450982.6
ENST00000621157.5
CDS GCA 72 bp CACTGGAGGCGGCCCAGAGCCAATGCAGTTGAGTGTTaGGGGCAAGGGTGGCTGCATGGCAGCGGCCGGTAT +
Preference number: 6 (lower is better)
Translates to: HWRRPRANAVEC*GQGWLHGSGRY
Trigger: ATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGGCCGCCTCCAGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS CCA 72 bp GCCTCCTCCAGGCGATGTCGGACAAAGGCCTGGTGGTaGGCAGGTGGCAGCATGTTGATGCTGGCCTCTGGG +
Preference number: 6 (lower is better)
Translates to: ASSRRCRTKAWW*AGGSMLMLASG
Trigger: CCCAGAGGCCAGCATCAACATGCTGCCACCTGCCCACCACCAGGCCTTTGTCCGACATCGCCTGGAGGAGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415204.5
CDS CAA 72 bp GAAGAGGGCACTGGAGGCGGCCCAGAGCCAATGCAGTaGAGTGTTGCGGGCAAGGGTGGCTGCATGGCAGCG +
Preference number: 6 (lower is better)
Translates to: EEGTGGGPEPMQ*SVAGKGGCMAA
Trigger: CGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGGCCGCCTCCAGTGCCCTCTTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS CAA 90 bp GATGCTGGGGAAGAGGGCACTGGAGGCGGCCCAGAGCCAATGCAGTaGAGTGTTGCGGGCAAGGGTGGCTGCATGGCAGCGGCCGGTATA +
Preference number: 6 (lower is better)
Translates to: DAGEEGTGGGPEPMQ*SVAGKGGCMAAAGI
Trigger: TATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGGCCGCCTCCAGTGCCCTCTTCCCCAGCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS TCA 72 bp CCTCCTGGGACAGGAACCTCCCAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGACAGGCAGGGGATGTC +
Preference number: 6 (lower is better)
Translates to: PPGTGTSQISGV*GGHRPGQAGDV
Trigger: GACATCCCCTGCCTGTCCTGGCCTATGTCCGCCTCACACACCGGAGATCTGGGAGGTTCCTGTCCCAGGAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000359051.7
ENST00000450982.6
ENST00000513170.1
CDS TCA 72 bp CATCCTGGGACAGGAACCTCCCAGATCTCCGGTGTGTaGGGCGGACATAGGCCAGGACAGGCAGGGGATGTC +
Preference number: 6 (lower is better)
Translates to: HPGTGTSQISGV*GGHRPGQAGDV
Trigger: GACATCCCCTGCCTGTCCTGGCCTATGTCCGCCTCACACACCGGAGATCTGGGAGGTTCCTGTCCCAGGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS GCA 72 bp AGCCCAGAGTGGACACCACTCCTCCCAATCCAGCACTaGTGGGCCAGCAAAGCCAGGTCTCAGGCTGTGGTG +
Preference number: 6 (lower is better)
Translates to: SPEWTPLLPIQH*WASKARSQAVV
Trigger: CACCACAGCCTGAGACCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAGGAGTGGTGTCCACTCTGGGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000435141.1
ENST00000450982.6
ENST00000621157.5
CDS CCA 72 bp CCAGAGTGGACACCACTCCTCCCAATCCAGCACTGCTaGGCCAGCAAAGCCAGGTCTCAGGCTGTGGTGGAT +
Preference number: 6 (lower is better)
Translates to: PEWTPLLPIQHC*ASKARSQAVVD
Trigger: ATCCACCACAGCCTGAGACCTGGCTTTGCTGGCCCAGCAGTGCTGGATTGGGAGGAGTGGTGTCCACTCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000435141.1
ENST00000450982.6
ENST00000621157.5
CDS CCA 72 bp GGGCAAGGGTGGCTGCATGGCAGCGGCCGGTATAGTTaGAAGCCATACTATGCCAGCCATTGCCACAGGCTG +
Preference number: 6 (lower is better)
Translates to: GQGWLHGSGRYS*KPYYASHCHRL
Trigger: CAGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS CCA 72 bp CCCAGAGCCAATGCAGTTGAGTGTTGCGGGCAAGGGTaGCTGCATGGCAGCGGCCGGTATAGTTGGAAGCCA +
Preference number: 6 (lower is better)
Translates to: PRANAVECCGQG*LHGSGRYSWKP
Trigger: TGGCTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS GCA 72 bp CCGGCTGCCCCTAGTGCTGCACTCACACCAATGGACTaGACAAGGTCATCCTGGGACAGGAACCTCCCAGAT +
Preference number: 6 (lower is better)
Translates to: PAAPSAALTPMD*TRSSWDRNLPD
Trigger: ATCTGGGAGGTTCCTGTCCCAGGATGACCTTGTGCAGTCCATTGGTGTGAGTGCAGCACTAGGGGCAGCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000336307.6
ENST00000415204.5
ENST00000621157.5
CDS GCA 72 bp AAAGAAGAGGCAGTGGCAGGGGCCCTGGCTTTATACTaGTTCTTTAGGCCCAGGCCTGGGCTCCTGGCAGGT +
Preference number: 6 (lower is better)
Translates to: KEEAVAGALALY*FFRPRPGLLAG
Trigger: ACCTGCCAGGAGCCCAGGCCTGGGCCTAAAGAAGCAGTATAAAGCCAGGGCCCCTGCCACTGCCTCTTCTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000415204.5
ENST00000450982.6
ENST00000513170.1
ENST00000621157.5
CDS GCA 72 bp GAGCCAATGCAGTTGAGTGTTGCGGGCAAGGGTGGCTaGATGGCAGCGGCCGGTATAGTTGGAAGCCATACT +
Preference number: 6 (lower is better)
Translates to: EPMQLSVAGKGG*MAAAGIVGSHT
Trigger: AGTATGGCTTCCAACTATACCGGCCGCTGCCATGCAGCCACCCTTGCCCGCAACACTCAACTGCATTGGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS CCA 72 bp GTTGGAAGCCATACTATGCCAGCCATTGCCACAGGCTaGGTAGTGATAGAAGCCCCAGAGTCCATGGGGCCG +
Preference number: 6 (lower is better)
Translates to: VGSHTMPAIATG*VVIEAPESMGP
Trigger: CGGCCCCATGGACTCTGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS GCA 72 bp GGCCGGTATAGTTGGAAGCCATACTATGCCAGCCATTaGCACAGGCTGGGTAGTGATAGAAGCCCCAGAGTC +
Preference number: 6 (lower is better)
Translates to: GRYSWKPYYASH*HRLGSDRSPRV
Trigger: GACTCTGGGGCTTCTATCACTACCCAGCCTGTGGCAATGGCTGGCATAGTATGGCTTCCAACTATACCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000450982.6
ENST00000621157.5
CDS CAA 72 bp TGTGCCCCTGGGTCCAAAGTAGGGATAGAGGCCGAGTaGGTTCTTGTAGAAAATGGTCATGTTCTGACCGTG +
Preference number: 6 (lower is better)
Translates to: CAPGSKVGIEAE*VLVENGHVLTV
Trigger: CACGGTCAGAACATGACCATTTTCTACAAGAACCAACTCGGCCTCTATCCCTACTTTGGACCCAGGGGCACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000336307.6
ENST00000359051.7
ENST00000435141.1
ENST00000450982.6
ENST00000621157.5