RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HVCN1 (Homo sapiens)

Ensembl gene IDs: ENSG00000122986

Ensembl transcript IDs: ENST00000242607.13, ENST00000356742.9, ENST00000439744.6, ENST00000546425.1, ENST00000546713.5, ENST00000547887.1, ENST00000548312.5, ENST00000549442.5, ENST00000620084.4

Found 366 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTaGTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGA +
Preference number: 1 (lower is better)
Translates to: CQVLCRNTSPVNMPA*FLLSLLYTAHFTPG
Trigger: TCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
3UTR CCA 90 bp ATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGATaGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCA +
Preference number: 1 (lower is better)
Translates to: MRKCDTFDTVWGGSG*AALGGTGPSTRLCP
Trigger: TGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
3UTR-3UTR TCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACCAGCTGTTCCTCTCGTaGCAGCACAGGCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHQLFLS*QHRPMR
Trigger: TCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTG...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACAAGTGTGGGGTGGGAGTaGATGGGCAGCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTSVGWE*MGSSWW
Trigger: CCACCAAGAGCTGCCCATCCACTCCCACCCCACACT...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACATGGGCAGCTCTTGGTaGTACTGGACCTTCCACAAG +
Preference number: 2 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHMGSSW*YWTFHK
Trigger: CTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCAT...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGTGGATGGGCAGCTCTTaGTGGTACTGGACCTTCCAC +
Preference number: 2 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLWMGSS*WYWTFH
Trigger: GTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCA...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGATGGGCAGCTCTTGGTaGTACTGGACCTTCCACAAG +
Preference number: 2 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLMGSSW*YWTFHK
Trigger: CTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCAT...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGAGTGTGGGGTGGGAGTaGATGGGCAGCTCTTGGTGG +
Preference number: 2 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMSVGWE*MGSSWW
Trigger: CCACCAAGAGCTGCCCATCCACTCCCACCCCACACT...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR TCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCAGCTGTTCCTCTCGTaGCAGCACAGGCCCATGAGA +
Preference number: 2 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWQLFLS*QHRPMR
Trigger: TCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTG...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGTGGGGTGGGAGTGGATaGGCAGCTCTTGGTGGTACT +
Preference number: 2 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWWGGSG*AALGGT
Trigger: AGTACCACCAAGAGCTGCCCATCCACTCCCACCCCA...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCAGCTCTTGGTGGTACTaGACCTTCCACAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: CTVIEEKCCQVAENNGATSSWWY*TFHKAV
Trigger: CACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCT...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CCA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAAGCTCTTGGTGGTACTaGACCTTCCACAAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGSSWWY*TFHKAV
Trigger: CACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCT...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
3UTR-3UTR GCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGTTCAGAATGCTCAGATaGATCAGTTCCTTAATATAC +
Preference number: 2 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWFRMLR*ISSLIY
Trigger: GTATATTAAGGAACTGATGCATCTGAGCATTCTGAA...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR-3UTR CAA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCGACAGTGTCTTCTTTTaGAGGGGAGCTGGTCCGGGT +
Preference number: 3 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSDSVFF*RGAGPG
Trigger: ACCCGGACCAGCTCCCCTCAAAAAGAAGACACTGTC...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
3UTR-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAGACAGTGTCTTCTTTTaGAGGGGAGCTGGTCCGGGT +
Preference number: 3 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTADSVFF*RGAGPG
Trigger: ACCCGGACCAGCTCCCCTCAAAAAGAAGACACTGTC...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
3UTR-3UTR CAA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGTGTCTTCTTTTaGAGGGGAGCTGGTCCGGGT +
Preference number: 3 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRDSVFF*RGAGPG
Trigger: ACCCGGACCAGCTCCCCTCAAAAAGAAGACACTGTC...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
3UTR-3UTR CAA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGGTGGATGGGCAGCTCTaGGTGGTACTGGACCTTCCA +
Preference number: 3 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMVDGQL*VVLDLP
Trigger: TGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
3UTR CCA 72 bp TCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTaGCAGGCTGGTATGGGTGCCACAGAGGAAAGAATA +
Preference number: 3 (lower is better)
Translates to: SAPGTVASLLSD*QAGMGATEERI
Trigger: TATTCTTTCCTCTGTGGCACCCATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
3UTR-3UTR CAA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGGCCTGGGTACCCCTTTaGGGGAAACTGAGACGAAGC +
Preference number: 3 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMAWVPL*GKLRRS
Trigger: GCTTCGTCTCAGTTTCCCCAAAAGGGGTACCCAGGC...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
3UTR CCA 72 bp CTGTACACAGCACATTTTACTCCAGGACTTTCACGGTaGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTC +
Preference number: 3 (lower is better)
Translates to: LYTAHFTPGLSR*LCESRSRILSF
Trigger: GAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
3UTR-3UTR CAA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCGAAAATGTGATACATTaGATACAGTGTGGGGTGGGA +
Preference number: 3 (lower is better)
Translates to: CTVIEEKCCQVAENNGATENVIH*IQCGVG
Trigger: TCCCACCCCACACTGTATCAAATGTATCACATTTTC...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATCTGCCTTCCTCGCCTaGGACTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTASAFLA*DWCGWW
Trigger: CCACCACCCACACCAGTCTCAGGCGAGGAAGGCAGA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACACACCTAGAAGCTGGCTaGTGCAGCTGGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETHLEAG*CSWGTQ
Trigger: CTGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTG...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGGGCTGCAGCTCTaGCTTCCTCGCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAQGLQL*LPRLRL
Trigger: CAGTCTCAGGCGAGGAAGGCAGAGCTGCAGCCCCTG...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAAGTGTGGGGTGGGAGTaGATGGGCAGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETSVGWE*MGSSWW
Trigger: CCACCAAGAGCTGCCCATCCACTCCCACCCCACACT...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACCTCCTTTGGCTGTGTaGCCCAAGGCAAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAPPLAV*PKARGL
Trigger: CAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGG...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR GCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGGTGTGGGTGGTGGCTaGTCCTCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTGVGGG*SSSSSS
Trigger: GGAGGAGGAGGAGGAGGAGCAGCCACCACCCACACC...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGGTGTGGGTGGTGGCTaGTCCTCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPGVGGG*SSSSSS
Trigger: GGAGGAGGAGGAGGAGGAGCAGCCACCACCCACACC...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGGCAACGTCAGGGGCTaGAGCTCTGCCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTGNVRG*SSAFLA
Trigger: GGCGAGGAAGGCAGAGCTGCAGCCCCTGACGTTGCC...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACACCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETPRQGA*PLCVLV
Trigger: AACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGG...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACACCTTTTCGTCCCAGGTaGCCATGTCCCTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETPFRPR*PCPCCL
Trigger: GAGGCAACAGGGACATGGCCACCTGGGACGAAAAGG...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAAGTGTGGGGTGGGAGTaGATGGGCAGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTASVGWE*MGSSWW
Trigger: CCACCAAGAGCTGCCCATCCACTCCCACCCCACACT...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAGCTTGCTCTCCGACTaGCAGGCTGGTATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSSLLSD*QAGMGA
Trigger: GGCACCCATACCAGCCTGCCAGTCGGAGAGCAAGCT...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR TCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACATCTGCCTTCCTCGCCTaGGACTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTSAFLA*DWCGWW
Trigger: CCACCACCCACACCAGTCTCAGGCGAGGAAGGCAGA...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACATCTTCAGGTCCAGGATaGGCTCAGCAAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETSSGPG*AQQAPG
Trigger: TCCTGGTGCTTGCTGAGCTCATCCTGGACCTGAAGA...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAAATGTCGAGGATGAATaGGACCACCACCACGACGGC +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETNVEDE*DHHHDG
Trigger: GCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATT...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGCTGTTCCTCTCGTaGCAGCACAGGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAQLFLS*QHRPMR
Trigger: TCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTG...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGGTGTGGGTGGTGGCTaGTCCTCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRGVGGG*SSSSSS
Trigger: GGAGGAGGAGGAGGAGGAGCAGCCACCACCCACACC...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGGTTTCTTCACCGCGTaGAGCCCCTGCCTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTGFFTA*SPCLSW
Trigger: CCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACC...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439744.6
CDS-3UTR CCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGACTGGTGTGGGTGGTaGCTGCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTDWCGW*LLLLLL
Trigger: GAGGAGGAGGAGGAGCAGCCACCACCCACACCAGTC...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACACGCCTGAGACTGGTGTaGGTGGTGGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTRLRLV*VVAAPP
Trigger: AGGAGGAGCAGCCACCACCCACACCAGTCTCAGGCG...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATGGGGTGGGAGTGGATaGGCAGCTCTTGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAWGGSG*AALGGT
Trigger: AGTACCACCAAGAGCTGCCCATCCACTCCCACCCCA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAGCTCCTAGTTGCTGGTaGGGCTGTCCGGAAATCCTG +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAAPSCW*GCPEIL
Trigger: CAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGC...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACGTCTCCCACGACCGTaGAGTGCCTTAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTARLPRP*SALRTC
Trigger: GCAAGTTCTTAAGGCACTTCACGGTCGTGGGAGACG...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTCCTTGGCCCTGCGGGTaGCTGCCTGGTTGTGAGTTC +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRPWPCG*LPGCEF
Trigger: GAACTCACAACCAGGCAGTCACCCGCAGGGCCAAGG...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439744.6
CDS-3UTR GCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACAGGGGCTGCAGCTCTaGCTTCCTCGCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEQGLQL*LPRLRL
Trigger: CAGTCTCAGGCGAGGAAGGCAGAGCTGCAGCCCCTG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTGGCAACGTCAGGGGCTaGAGCTCTGCCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFGNVRG*SSAFLA
Trigger: GGCGAGGAAGGCAGAGCTGCAGCCCCTGACGTTGCC...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACATCTGGTTGTGAGTTCTaGCTCTGCCTCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETSGCEF*LCLLWL
Trigger: CAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGA...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGACTGGTGTGGGTGGTaGCTGCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEDWCGW*LLLLLL
Trigger: GAGGAGGAGGAGGAGCAGCCACCACCCACACCAGTC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACGCCTGAGACTGGTGTaGGTGGTGGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPERLRLV*VVAAPP
Trigger: AGGAGGAGCAGCCACCACCCACACCAGTCTCAGGCG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAATGGGCAGCTCTTGGTaGTACTGGACCTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETMGSSW*YWTFHK
Trigger: CTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCAT...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATGGATGGGCAGCTCTTaGTGGTACTGGACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAWMGSS*WYWTFH
Trigger: GTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGGAGCCACCTAGAAGCTaGCTGATGCAGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVEPPRS*LMQLGH
Trigger: GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTC...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCCCTGGTTGTGAGTTCTaGCTCTGCCTCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSPGCEF*LCLLWL
Trigger: CAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGG...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356742.9
ENST00000439744.6
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACCTCCTTTGGCTGTGTaGCCCAAGGCAAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEPPLAV*PKARGL
Trigger: CAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR TCA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGTCTGCCTTCCTCGCCTaGGACTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMSAFLA*DWCGWW
Trigger: CCACCACCCACACCAGTCTCAGGCGAGGAAGGCAGA...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGCCAAGTCACGAAGCTaGGCCTGCAAGATCCCCCAC +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEAKSRS*ACKIPH
Trigger: GTGGGGGATCTTGCAGGCTCAGCTTCGTGACTTGGC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR GCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACGGGACATCCAGCACTaGCTCTGCCCCTGCTTCTCT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPERDIQH*LCPCFS
Trigger: AGAGAAGCAGGGGCAGAGGCAGTGCTGGATGTCCCG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR GCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACACAAGCAGCTCCTAGTTaGTGGTGGGGCTGTCCGGAA +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTQAAPS*WWGCPE
Trigger: TTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTG...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVPRQGA*PLCVLV
Trigger: AACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGG...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTGACTGGTGTGGGTGGTaGCTGCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFDWCGW*LLLLLL
Trigger: GAGGAGGAGGAGGAGCAGCCACCACCCACACCAGTC...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGTGACTGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTGCCGCCTGAGACTGGTGTaGGTGGTGGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: SDCQVLCRNTSPVNMPACRLRLV*VVAAPP
Trigger: AGGAGGAGCAGCCACCACCCACACCAGTCTCAGGCG...GCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACAGTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATGGGCAGCTCTTGGTaGTACTGGACCTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSMGSSW*YWTFHK
Trigger: CTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCAT...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACATGGGGTGGGAGTGGATaGGCAGCTCTTGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTWGGSG*AALGGT
Trigger: AGTACCACCAAGAGCTGCCCATCCACTCCCACCCCA...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGGCCTCTCTGCGTCTTaGTTTCTTCACCGCGTGCAG +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPGLSAS*FLHRVQ
Trigger: CTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCC...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439744.6
CDS-3UTR TCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGCGTCTCCCACGACCGTaGAGTGCCTTAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVRLPRP*SALRTC
Trigger: GCAAGTTCTTAAGGCACTTCACGGTCGTGGGAGACG...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGTCTGCCTTCCTCGCCTaGGACTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLSAFLA*DWCGWW
Trigger: CCACCACCCACACCAGTCTCAGGCGAGGAAGGCAGA...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGATGATGATGACCTaGAACCTGTGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAQMMMT*NLWELN
Trigger: GTTCAGCTCCCACAGGTTTCAGGTCATCATCATCTG...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGTCTTCAGGTCCAGGATaGGCTCAGCAAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVSSGPG*AQQAPG
Trigger: TCCTGGTGCTTGCTGAGCTCATCCTGGACCTGAAGA...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACACTGAACTCAAGGTGTTaGATCTTGGCGGCCAATTGT +
Preference number: 4 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETLNSRC*ILAANC
Trigger: ACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAG...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTCACCTAGAAGCTGGCTaGTGCAGCTGGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFHLEAG*CSWGTQ
Trigger: CTGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTG...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCCCCACGACCGTGAAGTaGCTTAAGAACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSPTTVK*LKNLLI
Trigger: GATGAGCAAGTTCTTAAGGCACTTCACGGTCGTGGG...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGCAGGGGCTGCAGCTCTaGCTTCCTCGCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLQGLQL*LPRLRL
Trigger: CAGTCTCAGGCGAGGAAGGCAGAGCTGCAGCCCCTG...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGCCTCTCTGCGTCTTaGTTTCTTCACCCGGCGCCC +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLGLSAS*FLHPAP
Trigger: GGGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCC...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGTGGCTCTGCCTCCTTTaGCTGTGTGACCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVWLCLL*LCDPRQ
Trigger: TTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCA...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGACTGGTGTGGGTGGTaGCTGCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLDWCGW*LLLLLL
Trigger: GAGGAGGAGGAGGAGCAGCCACCACCCACACCAGTC...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCG +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTASNWCS*NRRTMS
Trigger: CGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTTGGGGTGGGAGTGGATaGGCAGCTCTTGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRWGGSG*AALGGT
Trigger: AGTACCACCAAGAGCTGCCCATCCACTCCCACCCCA...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAATGGGGTGGGAGTGGATaGGCAGCTCTTGGTGGTACT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEWGGSG*AALGGT
Trigger: AGTACCACCAAGAGCTGCCCATCCACTCCCACCCCA...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACATTTGATACAGTGTaGGGTGGGAGTGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSTFDTV*GGSGWA
Trigger: TGCCCATCCACTCCCACCCCACACTGTATCAAATGT...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTCTCCGACTGGCAGGCTaGTATGGGTGCCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFLRLAG*YGCHRG
Trigger: TCCTCTGTGGCACCCATACCAGCCTGCCAGTCGGAG...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CCA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGCTCCGACTGGCAGGCTaGTATGGGTGCCACAGAGGA +
Preference number: 4 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMLRLAG*YGCHRG
Trigger: TCCTCTGTGGCACCCATACCAGCCTGCCAGTCGGAG...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CCA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGAGCTTGCTCTCCGACTaGCAGGCTGGTATGGGTGCC +
Preference number: 4 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMSLLSD*QAGMGA
Trigger: GGCACCCATACCAGCCTGCCAGTCGGAGAGCAAGCT...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTTCCTTCAGGGATGGCTaGGCCTGCTCATTGCAGCCT +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRSFRDG*ACSLQP
Trigger: AGGCTGCAATGAGCAGGCCCAGCCATCCCTGAAGGA...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACCTCCCCTCTCTGTCTTaGCGTTTACCCTGGCCCCAA +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHLPSLS*RLPWPQ
Trigger: TTGGGGCCAGGGTAAACGCCAAGACAGAGAGGGGAG...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACCGTCTCCCACGACCGTaGAGTGCCTTAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHRLPRP*SALRTC
Trigger: GCAAGTTCTTAAGGCACTTCACGGTCGTGGGAGACG...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAAATGTCGAGGATGAATaGGACCACCACCACGACGGC +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPENVEDE*DHHHDG
Trigger: GCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATT...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACACAGCTGTTCCTCTCGTaGCAGCACAGGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTQLFLS*QHRPMR
Trigger: TCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTG...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTCAGCTGTTCCTCTCGTaGCAGCACAGGCCCATGAGA +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFQLFLS*QHRPMR
Trigger: TCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTG...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGACAGATGCGGAAACTaGGGCAGAGACAGGCCAAGT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEDRCGN*GRDRPS
Trigger: ACTTGGCCTGTCTCTGCCTCAGTTTCCGCATCTGTC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR GCA 90 bp CAGCACATTTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGAGGTGTGGGTGGTGGCTaGTCCTCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: QHILLQDFHGGCVRVEVGGVGGG*SSSSSS
Trigger: GGAGGAGGAGGAGGAGGAGCAGCCACCACCCACACC...TCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGCTGGGCCTGCTCATTaGAGCCTTCTCCCGGGACAT +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLAGPAH*SLLPGH
Trigger: ATGTCCCGGGAGAAGGCTGCAATGAGCAGGCCCAGC...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACTGGCTCTGCCTCCTTTaGCTGTGTGACCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHWLCLL*LCDPRQ
Trigger: TTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCA...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000356742.9
CDS-3UTR CCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACACCTTTTCGTCCCAGGTaGCCATGTCCCTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTPFRPR*PCPCCL
Trigger: GAGGCAACAGGGACATGGCCACCTGGGACGAAAAGG...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCTTATTCTTGTCGGGCTaGATGATCTTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSLFLSG*MIFRSR
Trigger: CCTGGACCTGAAGATCATCCAGCCCGACAAGAATAA...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGAGCTCTTGGTGGTACTaGACCTTCCACAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVSSWWY*TFHKAV
Trigger: CACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCT...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAATGGGCAGCTCTTGGTaGTACTGGACCTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTMGSSW*YWTFHK
Trigger: CTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCAT...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTTGGATGGGCAGCTCTTaGTGGTACTGGACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRWMGSS*WYWTFH
Trigger: GTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCA...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTCCTGGTTGTGAGTTCTaGCTCTGCCTCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRPGCEF*LCLLWL
Trigger: CAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGG...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000356742.9
ENST00000439744.6
CDS-3UTR TCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTCGTCTCCCACGACCGTaGAGTGCCTTAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFRLPRP*SALRTC
Trigger: GCAAGTTCTTAAGGCACTTCACGGTCGTGGGAGACG...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACACAGATGATGATGACCTaGAACCTGTGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTQMMMT*NLWELN
Trigger: GTTCAGCTCCCACAGGTTTCAGGTCATCATCATCTG...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGCAGATGATGATGACCTaGAACCTGTGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVQMMMT*NLWELN
Trigger: GTTCAGCTCCCACAGGTTTCAGGTCATCATCATCTG...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGGACAATGTCGAGGATaGATGAGACCACCACCACGA +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEGQCRG*MRPPPR
Trigger: TCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACACCCACGACCGTGAAGTaGCTTAAGAACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTPTTVK*LKNLLI
Trigger: GATGAGCAAGTTCTTAAGGCACTTCACGGTCGTGGG...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGTCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCG +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVSNWCS*NRRTMS
Trigger: CGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGA...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACAGCTCTTGGTGGTACTaGACCTTCCACAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHSSWWY*TFHKAV
Trigger: CACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCT...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAACATTTGATACAGTGTaGGGTGGGAGTGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPTFDTV*GGSGWA
Trigger: TGCCCATCCACTCCCACCCCACACTGTATCAAATGT...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGAAACCTGTGGGAGCTaGACAGTTTCCTCAACATGC +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEETCGS*TVSSTC
Trigger: GCATGTTGAGGAAACTGTTCAGCTCCCACAGGTTTC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGTCTTCAGGTCCAGGATaGGCTCAGCAAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLSSGPG*AQQAPG
Trigger: TCCTGGTGCTTGCTGAGCTCATCCTGGACCTGAAGA...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGAATGTCGAGGATGAATaGGACCACCACCACGACGGC +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLNVEDE*DHHHDG
Trigger: GCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATT...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCACTGAACTCAAGGTGTTaGATCTTGGCGGCCAATTGT +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPLNSRC*ILAANC
Trigger: ACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAG...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCACCTTCTCAGAGCAGCTaGACTCAAGGTGTTGAATCT +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPPSQSS*TQGVES
Trigger: AGATTCAACACCTTGAGTTCAGCTGCTCTGAGAAGG...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTAGTGCCTTAAGAACTTaGTCATCCTCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRSALRT*SSSQRE
Trigger: CTCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACT...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACCCACGACCGTGAAGTaGCTTAAGAACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEPTTVK*LKNLLI
Trigger: GATGAGCAAGTTCTTAAGGCACTTCACGGTCGTGGG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGGTGTGGGTGGTGGCTaGTCCTCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQGVGGG*SSSSSS
Trigger: GGAGGAGGAGGAGGAGGAGCAGCCACCACCCACACC...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR GCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGGGCAACGTCAGGGGCTaGAGCTCTGCCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMGNVRG*SSAFLA
Trigger: GGCGAGGAAGGCAGAGCTGCAGCCCCTGACGTTGCC...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp TTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATGGCAACGTCAGGGGCTaGAGCTCTGCCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: LLQDFHGGCVRVEVGFFHGNVRG*SSAFLA
Trigger: GGCGAGGAAGGCAGAGCTGCAGCCCCTGACGTTGCC...ATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTGTTCCACTGAGGAACTaGTCTCCCCTCTCTGTCTTG +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFVPLRN*SPLSVL
Trigger: CAAGACAGAGAGGGGAGAGCAGTTCCTCAGTGGAAC...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR GCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTGCTGTCCGGAAATCCTaGAGATCTCAGATAGCCCTG +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFAVRKS*RSQIAL
Trigger: CAGGGCTATCTGAGATCTGCAGGATTTCCGGACAGC...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp GAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGGACTGGTGTGGGTGGTaGCTGCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: EYHGSIVILVGLDDLQVQDWCGW*LLLLLL
Trigger: GAGGAGGAGGAGGAGCAGCCACCACCCACACCAGTC...CTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGTTATTCTTGTCGGGCTaGATGATCTTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVLFLSG*MIFRSR
Trigger: CCTGGACCTGAAGATCATCCAGCCCGACAAGAATAA...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCATTATTCTTGTCGGGCTaGATGATCTTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPLFLSG*MIFRSR
Trigger: CCTGGACCTGAAGATCATCCAGCCCGACAAGAATAA...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTTCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCG +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRSNWCS*NRRTMS
Trigger: CGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGA...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAATCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCG +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPESNWCS*NRRTMS
Trigger: CGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGA...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACTTTTTGAGGGGAGCTaGTCCGGGTCTAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPELFEGS*SGSSSL
Trigger: AAGTGAACTAGACCCGGACCAGCTCCCCTCAAAAAG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTAGCTCTTGGTGGTACTaGACCTTCCACAAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFSSWWY*TFHKAV
Trigger: CACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCT...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACAGGTGGCAGAAAACAATaGAGCCACCTAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTGGRKQ*SHLEAG
Trigger: GCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACC...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp CATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGGATGAGGACCTGAGACTGGTGTaGGTGGTGGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: HGSIVILVGLDDLQVQDEDLRLV*VVAAPP
Trigger: AGGAGGAGCAGCCACCACCCACACCAGTCTCAGGTC...CTCATCCTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR TCA 90 bp CTGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCACGTCTGCCTTCCTCGCCTaGGACTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: LLPSLSSVHSTFYSRTFTSAFLA*DWCGWW
Trigger: CCACCACCCACACCAGTCTCAGGCGAGGAAGGCAGA...CGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACAGAAACCTGTGGGAGCTaGACAGTTTCCTCAACATGC +
Preference number: 4 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTETCGS*TVSSTC
Trigger: GCATGTTGAGGAAACTGTTCAGCTCCCACAGGTTTC...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp AGTGACTGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTGCGAAACCTGTGGGAGCTaGACAGTTTCCTCAACATGC +
Preference number: 4 (lower is better)
Translates to: SDCQVLCRNTSPVNMPACETCGS*TVSSTC
Trigger: GCATGTTGAGGAAACTGTTCAGCTCCCACAGGTTTC...GCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACAGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACCCTTCTCAGAGCAGCTaGACTCAAGGTGTTGAATCT +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHPSQSS*TQGVES
Trigger: AGATTCAACACCTTGAGTTCAGCTGCTCTGAGAAGG...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp AGTGACTGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTGCCCCACGACCGTGAAGTaGCTTAAGAACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: SDCQVLCRNTSPVNMPACPTTVK*LKNLLI
Trigger: GATGAGCAAGTTCTTAAGGCACTTCACGGTCGTGGG...GCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACAGTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp TTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATCAGGGGCTGCAGCTCTaGCTTCCTCGCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: LLQDFHGGCVRVEVGFFHQGLQL*LPRLRL
Trigger: CAGTCTCAGGCGAGGAAGGCAGAGCTGCAGCCCCTG...ATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTGCAGGCTGGTATGGGTaGCACAGAGGAAAGAATACA +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFAGWYG*HRGKNT
Trigger: TGTATTCTTTCCTCTGTGGCACCCATACCAGCCTGC...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR GCA 90 bp AGTGACTGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTGCGTGAACATGCCAGCCTaGTTCCTTCTCTCTCTTCTG +
Preference number: 4 (lower is better)
Translates to: SDCQVLCRNTSPVNMPACVNMPA*FLLSLL
Trigger: CAGAAGAGAGAGAAGGAAGCAGGCTGGCATGTTCAC...GCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACAGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp TTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATGACTGGTGTGGGTGGTaGCTGCTCCTCCTCCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLQDFHGGCVRVEVGFFHDWCGW*LLLLLL
Trigger: GAGGAGGAGGAGGAGCAGCCACCACCCACACCAGTC...ATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp TTCTTTCATTCCCATAGCCATCCGGAGAGAGCTTCTCCTTACAGGTTGATACAGCAAAGGTCCCGCCCGTaGGAGCGAATCGCGGATCAC +
Preference number: 4 (lower is better)
Translates to: FFHSHSHPERASPYRLIQQRSRP*ERIADH
Trigger: GTGATCCGCGATTCGCTCCCACGGGCGGGACCTTTG...CTGTATCAACCTGTAAGGAGAAGCTCTCTCCGGATGGCTATGGGAATGAAAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp AGTGACTGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTGCCCAGGACTTTCACGGTaGCTGTGTGAGAGTAGAAGT +
Preference number: 4 (lower is better)
Translates to: SDCQVLCRNTSPVNMPACPGLSR*LCESRS
Trigger: ACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGG...GCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACAGTCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCCTCCTTTGGCTGTGTaGCCCAAGGCAAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMPPLAV*PKARGL
Trigger: CAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGG...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000356742.9
CDS-3UTR TCA 90 bp TTCTGTACACAGCACATTTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTACCTCCTTTGGCTGTGTaGCCCAAGGCAAGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: FCTQHILLQDFHGGCVRVPPLAV*PKARGL
Trigger: CAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGG...TACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCCCTTGGCCCTGCGGGTaGCTGCCTTTTCGTCCCAGG +
Preference number: 4 (lower is better)
Translates to: CTVIEEKCCQVAENNGATPWPCG*LPFRPR
Trigger: CCTGGGACGAAAAGGCAGTCACCCGCAGGGCCAAGG...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp CATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGGATGAGCGTCTCCCACGACCGTaGAGTGCCTTAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: HGSIVILVGLDDLQVQDERLPRP*SALRTC
Trigger: GCAAGTTCTTAAGGCACTTCACGGTCGTGGGAGACG...CTCATCCTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR TCA 90 bp GGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCCATAGCCATCCGGAGAGACGTCTCCCACGACCGTaGAGTGCCTTAAGAACTTGC +
Preference number: 4 (lower is better)
Translates to: GCVRVEVGFFHSHSHPERRLPRP*SALRTC
Trigger: GCAAGTTCTTAAGGCACTTCACGGTCGTGGGAGACG...TCTCTCCGGATGGCTATGGGAATGAAAGAATCCGACTTCTACTCTCACACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACCCATTTCTTGTAGTTaGTGTTCCAGGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEPISCS*CSRHGS
Trigger: ACTACCATGCCTGGAACATCAACTACAAGAAATGGG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGAAACCTGTGGGAGCTaGACAGTTTCCTCAACATGC +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLETCGS*TVSSTC
Trigger: GCATGTTGAGGAAACTGTTCAGCTCCCACAGGTTTC...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCCATAGCCATCCGGAGAGATCTTCAGGTCCAGGATaGGCTCAGCAAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: GCVRVEVGFFHSHSHPERSSGPG*AQQAPG
Trigger: TCCTGGTGCTTGCTGAGCTCATCCTGGACCTGAAGA...TCTCTCCGGATGGCTATGGGAATGAAAGAATCCGACTTCTACTCTCACACAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp CCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCCAAATGTCGAGGATGAATaGGACCACCACCACGACGGC +
Preference number: 4 (lower is better)
Translates to: PGLSRWLCESRSRILSFPNVEDE*DHHHDG
Trigger: GCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATT...TGGGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACACCTTCTCAGAGCAGCTaGACTCAAGGTGTTGAATCT +
Preference number: 4 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTPSQSS*TQGVES
Trigger: AGATTCAACACCTTGAGTTCAGCTGCTCTGAGAAGG...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGAGTGCCTTAAGAACTTaGTCATCCTCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLSALRT*SSSQRE
Trigger: CTCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACT...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATTTAACCTTAAGAGTTaGCGTTCTGAACGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAFNLKS*RSERVL
Trigger: TAAGACACGTTCAGAACGGCAACTCTTAAGGTTAAA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACTCTTCTCAGCAATCCTaGGAGGTAGGTACATGCTTA +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHSSQQS*EVGTCL
Trigger: TAAGCATGTACCTACCTCGCAGGATTGCTGAGAAGA...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGAGTGTGGGGTGGGAGTaGATGGGCAGCTCTTGGTGG +
Preference number: 4 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWSVGWE*MGSSWW
Trigger: CCACCAAGAGCTGCCCATCCACTCCCACCCCACACT...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGGAGCCACCTAGAAGCTaGCTGATGCAGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMEPPRS*LMQLGH
Trigger: GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTC...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTCCCATTTCTTGTAGTTaGTGTTCCAGGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFPISCS*CSRHGS
Trigger: ACTACCATGCCTGGAACATCAACTACAAGAAATGGG...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GACTGTCAGGTTCTCTGTCGTAACACCAGCCCAGTGAACATGCCAGCCTGCTTCCCCATTTCTTGTAGTTaGTGTTCCAGGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: DCQVLCRNTSPVNMPACFPISCS*CSRHGS
Trigger: ACTACCATGCCTGGAACATCAACTACAAGAAATGGG...GAAGCAGGCTGGCATGTTCACTGGGCTGGTGTTACGACAGAGAACCTGACAGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp GAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGTCTTCAGGTCCAGGATaGGCTCAGCAAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: EYHGSIVILVGLDDLQVQSSGPG*AQQAPG
Trigger: TCCTGGTGCTTGCTGAGCTCATCCTGGACCTGAAGA...CTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR TCA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAAAAAGACCAAGATGGTaGTGCTCATGTAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPKRPRW*CSCSGI
Trigger: TATTCCACTACATGAGCATCACCATCTTGGTCTTTT...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGCTGAACTCAAGGTGTTaGATCTTGGCGGCCAATTGT +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLLNSRC*ILAANC
Trigger: ACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAG...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGTGGAGGGAGTTCCACTaGGGAACTGCTCTCCCCTCT +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMWREFH*GTALPS
Trigger: AGAGGGGAGAGCAGTTCCTCAGTGGAACTCCCTCCA...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp GAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGCAGATGATGATGACCTaGGACTGGTGTGGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: EYHGSIVILVGLDDLQVQQMMMT*DWCGWW
Trigger: CCACCACCCACACCAGTCTCAGGTCATCATCATCTG...CTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR TCA 90 bp TTCTGTACACAGCACATTTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGTAACACCAGCCCAGTaGACATGCCAGCCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: FCTQHILLQDFHGGCVRVVTPAQ*TCQPAS
Trigger: GGAAGCAGGCTGGCATGTTCACTGGGCTGGTGTTAC...TACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGACAGGGGCTGCAGCTCTaGCTTCCTCGCCTGAGACTG +
Preference number: 4 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGQGLQL*LPRLRL
Trigger: CAGTCTCAGGCGAGGAAGGCAGAGCTGCAGCCCCTG...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAATTGTCCAGCTTTGTTaGTCATTTTCAATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAIVQLC*SFSIKA
Trigger: AGCCTTAATTGAAAATGAGCAACAAAGCTGGACAAT...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCTTCAGAATGCTCAGATaGATCAGTTCCTTAATATAC +
Preference number: 4 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSFRMLR*ISSLIY
Trigger: GTATATTAAGGAACTGATGCATCTGAGCATTCTGAA...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AGCCTGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: SLLPSLSSVHSTFYSRTFPRQGA*PLCVLV
Trigger: AACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGG...GAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp CTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCTCTGGTTGTGAGTTCTaGCTCTGCCTCCTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: LQDFHGGCVRVEVGFFHSSGCEF*LCLLWL
Trigger: CAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGA...GGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCCTTTTCGTCCCAGGTaGCCATGTCCCTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWPFRPR*PCPCCL
Trigger: GAGGCAACAGGGACATGGCCACCTGGGACGAAAAGG...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGCCTTTTCGTCCCAGGTaGCCATGTCCCTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQPFRPR*PCPCCL
Trigger: GAGGCAACAGGGACATGGCCACCTGGGACGAAAAGG...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR CCA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGACGCCTGAGACTGGTGTaGGTGGTGGCTGCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGRLRLV*VVAAPP
Trigger: AGGAGGAGCAGCCACCACCCACACCAGTCTCAGGCG...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACCAAGGTGTTGAATCTTaGCGGCCAATTGTACATTCA +
Preference number: 4 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHQGVES*RPIVHS
Trigger: TGAATGTACAATTGGCCGCCAAGATTCAACACCTTG...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAACAAGGTGTTGAATCTTaGCGGCCAATTGTACATTCA +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEQGVES*RPIVHS
Trigger: TGAATGTACAATTGGCCGCCAAGATTCAACACCTTG...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGTGGAGGAAGCACTaGAACCATGAACTTTTGGTA +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLGWRKH*NHELLV
Trigger: TACCAAAAGTTCATGGTTCCAGTGCTTCCTCCACCC...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGCCCATTTCTTGTAGTTaGTGTTCCAGGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLPISCS*CSRHGS
Trigger: ACTACCATGCCTGGAACATCAACTACAAGAAATGGG...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTAAAAGACCAAGATGGTaGTGCTCATGTAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRKRPRW*CSCSGI
Trigger: TATTCCACTACATGAGCATCACCATCTTGGTCTTTT...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCCACCTAGAAGCTGGCTaGTGCAGCTGGGGCACACAG +
Preference number: 4 (lower is better)
Translates to: CTVIEEKCCQVAENNGATHLEAG*CSWGTQ
Trigger: CTGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTG...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp CATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGGATGAGCCCACGACCGTGAAGTaGCTTAAGAACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: HGSIVILVGLDDLQVQDEPTTVK*LKNLLI
Trigger: GATGAGCAAGTTCTTAAGGCACTTCACGGTCGTGGG...CTCATCCTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR GCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGTGTGGGTGGTGGCTaGTCCTCCTCCTCCTCCTCC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSGVGGG*SSSSSS
Trigger: GGAGGAGGAGGAGGAGGAGCAGCCACCACCCACACC...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGCAACGTCAGGGGCTaGAGCTCTGCCTTCCTCGCC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSGNVRG*SSAFLA
Trigger: GGCGAGGAAGGCAGAGCTGCAGCCCCTGACGTTGCC...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTTCACCAAGAAGTCCATaGTGTCGCAATAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRSPRSP*CRNSLL
Trigger: TAACAAACTATTGCGACAGCATGGACTTCTTGGTGA...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAATCACCAAGAAGTCCATaGTGTCGCAATAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPESPRSP*CRNSLL
Trigger: TAACAAACTATTGCGACAGCATGGACTTCTTGGTGA...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTGTCCTGGGCCGCCTTaGTCCGGGCCAACTCGTACG +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSCPGPP*SGPTRT
Trigger: CGTACGAGTTGGCCCGGAGCAAGGCGGCCCAGGACA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439744.6
CDS-3UTR CCA 90 bp CTGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCACGTGGCTCTGCCTCCTTTaGCTGTGTGACCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: LLPSLSSVHSTFYSRTFTWLCLL*LCDPRQ
Trigger: TTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCA...CGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGTGTAGTGGAATACCATaGCAGCATAGTTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVCSGIP*QHSYSC
Trigger: ACAAGAATAACTATGCTGCCATGGTATTCCACTACA...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp CTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCTCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCG +
Preference number: 4 (lower is better)
Translates to: LQDFHGGCVRVEVGFFHSSNWCS*NRRTMS
Trigger: CGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGA...GGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGCAAGGTGTTGAATCTTaGCGGCCAATTGTACATTCA +
Preference number: 4 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMQGVES*RPIVHS
Trigger: TGAATGTACAATTGGCCGCCAAGATTCAACACCTTG...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGTGGATGGGCAGCTCTTaGTGGTACTGGACCTTCCAC +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMWMGSS*WYWTFH
Trigger: GTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCA...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAGAGCCACCTAGAAGCTaGCTGATGCAGCTGGGGCAC +
Preference number: 4 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGEPPRS*LMQLGH
Trigger: GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTC...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AGCCTGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCGGCCTCTCTGCGTCTTaGTTTCTTCACCTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLLPSLSSVHSTFYSRTFGLSAS*FLHLPH
Trigger: GTGAGGGAGGTGAAGAAACCAAGACGCAGAGAGGCC...GAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp TTCTGTACACAGCACATTTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGGACAATGTCGAGGATaGATGAGACCACCACCACGA +
Preference number: 4 (lower is better)
Translates to: FCTQHILLQDFHGGCVRVGQCRG*MRPPPR
Trigger: TCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCC...TACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR TCA 90 bp CTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCGCTTCTCAGAGCAGCTaGACTCAAGGTGTTGAATCT +
Preference number: 4 (lower is better)
Translates to: LQDFHGGCVRVEVGFFHSASQSS*TQGVES
Trigger: AGATTCAACACCTTGAGTTCAGCTGCTCTGAGAAGC...GGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp GAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGAGTGCCTTAAGAACTTaGTCATCCTCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: EYHGSIVILVGLDDLQVQSALRT*SSSQRE
Trigger: CTCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACT...CTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR GCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAATTTAACCTTAAGAGTTaGCGTTCTGAACGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEFNLKS*RSERVL
Trigger: TAAGACACGTTCAGAACGGCAACTCTTAAGGTTAAA...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACATCACCAAGAAGTCCATaGTGTCGCAATAGTTTGTTA +
Preference number: 4 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTSPRSP*CRNSLL
Trigger: TAACAAACTATTGCGACAGCATGGACTTCTTGGTGA...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGATTGTCCAGCTTTGTTaGTCATTTTCAATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVIVQLC*SFSIKA
Trigger: AGCCTTAATTGAAAATGAGCAACAAAGCTGGACAAT...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTTGTAGTGGAATACCATaGCAGCATAGTTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRCSGIP*QHSYSC
Trigger: ACAAGAATAACTATGCTGCCATGGTATTCCACTACA...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAATGTAGTGGAATACCATaGCAGCATAGTTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPECSGIP*QHSYSC
Trigger: ACAAGAATAACTATGCTGCCATGGTATTCCACTACA...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGATGGGCAGCTCTTGGTaGTACTGGACCTTCCACAAG +
Preference number: 4 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWMGSSW*YWTFHK
Trigger: CTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCAT...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp TTCTGTACACAGCACATTTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTACAGATGATGATGACCTaGAACCTGTGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: FCTQHILLQDFHGGCVRVQMMMT*NLWELN
Trigger: GTTCAGCTCCCACAGGTTTCAGGTCATCATCATCTG...TACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGAGTGCCTTAAGAACTTaGTCATCCTCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMSALRT*SSSQRE
Trigger: CTCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACT...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp AGCCTGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCAGTGCCTTAAGAACTTaGTCATCCTCTCAGCGGGAG +
Preference number: 4 (lower is better)
Translates to: SLLPSLSSVHSTFYSRTFSALRT*SSSQRE
Trigger: CTCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACT...GAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAGGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGTTCTTTCTTTCAGAATaGTCAGATGCATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMFFLSE*SDASVP
Trigger: AGGAACTGATGCATCTGAGCATTCTGAAAGAAAGAA...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR GCA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTTTCTTTCTTTCAGAATaGTCAGATGCATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFFFLSE*SDASVP
Trigger: AGGAACTGATGCATCTGAGCATTCTGAAAGAAAGAA...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGGCAGGCTGGTATGGGTaGCACAGAGGAAAGAATACA +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMAGWYG*HRGKNT
Trigger: TGTATTCTTTCCTCTGTGGCACCCATACCAGCCTGC...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR GCA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGACACTGCCTCTGCCCCTaGTTCTCTCCTACAATCTCC +
Preference number: 4 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGHCLCP*FSPTIS
Trigger: GGAGATTGTAGGAGAGAAGCAGGGGCAGAGGCAGTG...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR GCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGTGGCCATGTCCCTGTTaGCTCTGGATCTTGGTCTTA +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMWPCPC*LWILVL
Trigger: TAAGACCAAGATCCAGAGGCAACAGGGACATGGCCA...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGACATTTGATACAGTGTaGGGTGGGAGTGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWTFDTV*GGSGWA
Trigger: TGCCCATCCACTCCCACCCCACACTGTATCAAATGT...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp CCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCCATTGTTCTCTTGTGATTaGAAACAGGCAGATGCTCTG +
Preference number: 4 (lower is better)
Translates to: PGLSRWLCESRSRILSFPLFSCD*KQADAL
Trigger: CAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAA...TGGGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGTTCAGAATGCTCAGATaGATCAGTTCCTTAATATAC +
Preference number: 4 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMFRMLR*ISSLIY
Trigger: GTATATTAAGGAACTGATGCATCTGAGCATTCTGAA...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR GCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGTTCTTTCTTTCAGAATaGTCAGATGCATCAGTTCCT +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLFFLSE*SDASVP
Trigger: AGGAACTGATGCATCTGAGCATTCTGAAAGAAAGAA...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTT +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSPRQGA*PLCVLV
Trigger: AACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGG...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CCA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGTTATTCTTGTCGGGCTaGATGATCTTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQLFLSG*MIFRSR
Trigger: CCTGGACCTGAAGATCATCCAGCCCGACAAGAATAA...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR CCA 90 bp CTGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCACGTTATTCTTGTCGGGCTaGATGATCTTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLPSLSSVHSTFYSRTFTLFLSG*MIFRSR
Trigger: CCTGGACCTGAAGATCATCCAGCCCGACAAGAATAA...CGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGTGTAGTGGAATACCATaGCAGCATAGTTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLCSGIP*QHSYSC
Trigger: ACAAGAATAACTATGCTGCCATGGTATTCCACTACA...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCGGTGGCAGAAAACAATaGAGCCACCTAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: CTVIEEKCCQVAENNGATGGRKQ*SHLEAG
Trigger: GCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACC...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGCAGCTCCTAGTTGCTaGTGGGGCTGTCCGGAAATC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSAAPSC*WGCPEI
Trigger: GATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGC...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGCCCATTTCTTGTAGTTaGTGTTCCAGGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQPISCS*CSRHGS
Trigger: ACTACCATGCCTGGAACATCAACTACAAGAAATGGG...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR TCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTCTTCAGGTCCAGGATaGGCTCAGCAAGCACCAGGA +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSSSGPG*AQQAPG
Trigger: TCCTGGTGCTTGCTGAGCTCATCCTGGACCTGAAGA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCCCCACGACCGTGAAGTaGCTTAAGAACTTGCTCATC +
Preference number: 4 (lower is better)
Translates to: CTVIEEKCCQVAENNGATPTTVK*LKNLLI
Trigger: GATGAGCAAGTTCTTAAGGCACTTCACGGTCGTGGG...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGATTGTCCAGCTTTGTTaGTCATTTTCAATTAAGGCT +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLIVQLC*SFSIKA
Trigger: AGCCTTAATTGAAAATGAGCAACAAAGCTGGACAAT...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR GCA 90 bp GTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGTTCAGAATGCTCAGATaGATCAGTTCCTTAATATAC +
Preference number: 4 (lower is better)
Translates to: VVRWQKTMEPPRSWLMQLFRMLR*ISSLIY
Trigger: GTATATTAAGGAACTGATGCATCTGAGCATTCTGAA...CAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTGGCTCTGCCTCCTTTaGCTGTGTGACCCAAGGCAA +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSWLCLL*LCDPRQ
Trigger: TTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CCA 90 bp TTTTGTTCTCTTGTGATTGAAAACAGGCAGATGCTCTGTGTGATTTGTAATCTGCCTTTTCGTCCCAGGTaGCCATGTCCCTGTTGCCTC +
Preference number: 4 (lower is better)
Translates to: FCSLVIENRQMLCVICNLPFRPR*PCPCCL
Trigger: GAGGCAACAGGGACATGGCCACCTGGGACGAAAAGG...CAGATTACAAATCACACAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGACTTTTTGAGGGGAGCTaGTCCGGGTCTAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGLFEGS*SGSSSL
Trigger: AAGTGAACTAGACCCGGACCAGCTCCCCTCAAAAAG...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCGTTGCCTCTGGATCTTaGTCTTACTCAAGCAGCTCC +
Preference number: 4 (lower is better)
Translates to: CTVIEEKCCQVAENNGATVASGS*SYSSSS
Trigger: GGAGCTGCTTGAGTAAGACCAAGATCCAGAGGCAAC...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGACAATGTCGAGGATaGATGAGACCACCACCACGA +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSGQCRG*MRPPPR
Trigger: TCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCC...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTTGGTAGTAACCTGGTaGCAGGGGCTAAGCCTGTAC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSLVVTW*QGLSLY
Trigger: GTACAGGCTTAGCCCCTGGCACCAGGTTACTACCAA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CCA 90 bp CATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGGTCCAGGATGAGTGTAGTGGAATACCATaGCAGCATAGTTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: HGSIVILVGLDDLQVQDECSGIP*QHSYSC
Trigger: ACAAGAATAACTATGCTGCCATGGTATTCCACTACA...CTCATCCTGGACCTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR CCA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAAGGTGTTGAATCTTaGCGGCCAATTGTACATTCA +
Preference number: 4 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMQGVES*RPIVHS
Trigger: TGAATGTACAATTGGCCGCCAAGATTCAACACCTTG...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGTGGCAGAAAACAATaGAGCCACCTAGAAGCTGGC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSGGRKQ*SHLEAG
Trigger: GCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACC...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CCA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTGTCCCTGTTGCCTCTaGATCTTGGTCTTACTCAAG +
Preference number: 4 (lower is better)
Translates to: CTVIEEKCCQVAENNGATCPCCL*ILVLLK
Trigger: CTTGAGTAAGACCAAGATCCAGAGGCAACAGGGACA...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTCAGATGATGATGACCTaGAACCTGTGGGAGCTGAAC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSQMMMT*NLWELN
Trigger: GTTCAGCTCCCACAGGTTTCAGGTCATCATCATCTG...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGAAAAGACCAAGATGGTaGTGCTCATGTAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWKRPRW*CSCSGI
Trigger: TATTCCACTACATGAGCATCACCATCTTGGTCTTTT...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR TCA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGAAAAGACCAAGATGGTaGTGCTCATGTAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQKRPRW*CSCSGI
Trigger: TATTCCACTACATGAGCATCACCATCTTGGTCTTTT...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR TCA 90 bp TGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCACGGAAAAGACCAAGATGGTaGTGCTCATGTAGTGGAATA +
Preference number: 4 (lower is better)
Translates to: CFLLSLLYTAHFTPGLSRKRPRW*CSCSGI
Trigger: TATTCCACTACATGAGCATCACCATCTTGGTCTTTT...CCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTCTTTTTGAGGGGAGCTaGTCCGGGTCTAGTTCACTT +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSLFEGS*SGSSSL
Trigger: AAGTGAACTAGACCCGGACCAGCTCCCCTCAAAAAG...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTCTTGGCGTTTACCCTaGCCCCAATCACTCTTGTTC +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSSWRLP*PQSLLF
Trigger: GAACAAGAGTGATTGGGGCCAGGGTAAACGCCAAGA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR TCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTCTGAACTCAAGGTGTTaGATCTTGGCGGCCAATTGT +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSLNSRC*ILAANC
Trigger: ACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAG...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR GCA 90 bp TTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTTAACCTTAAGAGTTaGCGTTCTGAACGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: FTPGLSRWLCESRSRILSFNLKS*RSERVL
Trigger: TAAGACACGTTCAGAACGGCAACTCTTAAGGTTAAA...TGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTTATTCTTGTCGGGCTaGATGATCTTCAGGTCCAGG +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSLFLSG*MIFRSR
Trigger: CCTGGACCTGAAGATCATCCAGCCCGACAAGAATAA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTCCCATTTCTTGTAGTTaGTGTTCCAGGCATGGTAGT +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSPISCS*CSRHGS
Trigger: ACTACCATGCCTGGAACATCAACTACAAGAAATGGG...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR TCA 90 bp TTTTGTTCTCTTGTGATTGAAAACAGGCAGATGCTCTGTGTGATTTGTAATCTGCTGAACTCAAGGTGTTaGATCTTGGCGGCCAATTGT +
Preference number: 4 (lower is better)
Translates to: FCSLVIENRQMLCVICNLLNSRC*ILAANC
Trigger: ACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAG...CAGATTACAAATCACACAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CCA 90 bp TTTTGTTCTCTTGTGATTGAAAACAGGCAGATGCTCTGTGTGATTTGTAATCTGCAAGGTGTTGAATCTTaGCGGCCAATTGTACATTCA +
Preference number: 4 (lower is better)
Translates to: FCSLVIENRQMLCVICNLQGVES*RPIVHS
Trigger: TGAATGTACAATTGGCCGCCAAGATTCAACACCTTG...CAGATTACAAATCACACAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR GCA 90 bp AAAGTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTTTTAACCTTAAGAGTTaGCGTTCTGAACGTGTCTTA +
Preference number: 4 (lower is better)
Translates to: KVFNMRKCDTFDTVWGGSFNLKS*RSERVL
Trigger: TAAGACACGTTCAGAACGGCAACTCTTAAGGTTAAA...ACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACACTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CCA 90 bp TTTTGTTCTCTTGTGATTGAAAACAGGCAGATGCTCTGTGTGATTTGTAATCTGTGTAGTGGAATACCATaGCAGCATAGTTATTCTTGT +
Preference number: 4 (lower is better)
Translates to: FCSLVIENRQMLCVICNLCSGIP*QHSYSC
Trigger: ACAAGAATAACTATGCTGCCATGGTATTCCACTACA...CAGATTACAAATCACACAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS GCA 90 bp TTGGTTTCTTCACCGCGTGCAGCCCCTGCCTGTCCTGGGCCGCCTTaGTCCGGGCCAACTCGTACGGCCCCGCAGGCGCAGGCCCAGCTC +
Preference number: 5 (lower is better)
Translates to: LVSSPRAAPACPGPP*SGPTRTAPQAQAQL
Trigger: GAGCTGGGCCTGCGCCTGCGGGGCCGTACGAGTTGGCCCGGAGCAAGGCGGCCCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546425.1
ENST00000549442.5
CDS GCA 90 bp GGCTTGGCCTCTCTGCGTCTTGGTTTCTTCACCGCGTGCAGCCCCTaGCTGTCCTGGGCCGCCTTGCTCCGGGCCAACTCGTACGGCCCC +
Preference number: 5 (lower is better)
Translates to: GLASLRLGFFTACSP*LSWAALLRANSYGP
Trigger: GGGGCCGTACGAGTTGGCCCGGAGCAAGGCGGCCCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000546425.1
ENST00000549442.5
CDS CCA 90 bp TCTCTGCGTCTTGGTTTCTTCACCGCGTGCAGCCCCTGCCTGTCCTaGGCCGCCTTGCTCCGGGCCAACTCGTACGGCCCCGCAGGCGCA +
Preference number: 5 (lower is better)
Translates to: SLRLGFFTACSPCLS*AALLRANSYGPAGA
Trigger: TGCGCCTGCGGGGCCGTACGAGTTGGCCCGGAGCAAGGCGGCCCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000546425.1
ENST00000549442.5
CDS CCA 90 bp TTTGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTTaGTTTCTTCACCCGGCGCCCCACCCGCCCGCGGTCACCGCTGCG +
Preference number: 5 (lower is better)
Translates to: FGCVTQGKGLGLSAS*FLHPAPHPPAVTAA
Trigger: CGCAGCGGTGACCGCGGGCGGGTGGGGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS GCA 90 bp AAGGCAAGGGGCTTGGCCTCTCTGCGTCTTGGTTTCTTCACCGCGTaGAGCCCCTGCCTGTCCTGGGCCGCCTTGCTCCGGGCCAACTCG +
Preference number: 5 (lower is better)
Translates to: KARGLASLRLGFFTA*SPCLSWAALLRANS
Trigger: CGAGTTGGCCCGGAGCAAGGCGGCCCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATCAGCGGGAGCCACCTaGGCCCTGCGGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTASAGAT*ALRVTA
Trigger: GGCAGTCACCCGCAGGGCCAAGGTGGCTCCCGCTGA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCTCAGCGGGAGCCACCTaGGCCCTGCGGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSSAGAT*ALRVTA
Trigger: GGCAGTCACCCGCAGGGCCAAGGTGGCTCCCGCTGA...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS GCA 90 bp CTCATTGCAGCCTTCTCCCGGGACATCCAGCACTGCCTCTGCCCCTaGTTCTCTCCTACAATCTCCCGGGAGGGCAGCGGGGCAGGGACG +
Preference number: 5 (lower is better)
Translates to: LIAAFSRDIQHCLCP*FSPTISREGSGAGT
Trigger: CGTCCCTGCCCCGCTGCCCTCCCGGGAGATTGTAGGAGAGAAGCAGGGGCAGAGGCAGTGCTGGATGTCCCGGGAGAAGGCTGCAATGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACTGTCCTGGGCCGCCTaGCTCCGGGCCAACTCGTAC +
Preference number: 5 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTALSWAA*LRANSY
Trigger: GTACGAGTTGGCCCGGAGCAAGGCGGCCCAGGACAG...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439744.6
CDS GCA 90 bp TGGCTGGGCCTGCTCATTGCAGCCTTCTCCCGGGACATCCAGCACTaGCTCTGCCCCTGCTTCTCTCCTACAATCTCCCGGGAGGGCAGC +
Preference number: 5 (lower is better)
Translates to: WLGLLIAAFSRDIQH*LCPCFSPTISREGS
Trigger: GCTGCCCTCCCGGGAGATTGTAGGAGAGAAGCAGGGGCAGAGGCAGTGCTGGATGTCCCGGGAGAAGGCTGCAATGAGCAGGCCCAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 90 bp TTTGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTTaGTTTCTTCACCGCGTGCAGCCCCTGCCTGTCCTGGGCCGCCTT +
Preference number: 5 (lower is better)
Translates to: FGCVTQGKGLGLSAS*FLHRVQPLPVLGRL
Trigger: AAGGCGGCCCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS-3UTR CAA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCCCCAAGGCAAGGGGCTaGGCCTCTCTGCGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSPKARG*ASLRLG
Trigger: ACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGG...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CAA 90 bp AGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACATCTCCCCTCTCTGTCTaGGCGTTTACCCTGGCCCCA +
Preference number: 5 (lower is better)
Translates to: SGPGGAAVPLVTAQAHETSPLSV*AFTLAP
Trigger: TGGGGCCAGGGTAAACGCCAAGACAGAGAGGGGAGA...TGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGGCTGGGCCTGCTCATaGCAGCCTTCTCCCGGGACA +
Preference number: 5 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPGWACS*QPSPGT
Trigger: TGTCCCGGGAGAAGGCTGCAATGAGCAGGCCCAGCC...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 90 bp GCTTCTCTCCTACAATCTCCCGGGAGGGCAGCGGGGCAGGGACGATaGATCCGAGGACTTAGGGGACACAGACCTGGTTGTGAGTTCTGG +
Preference number: 5 (lower is better)
Translates to: ASLLQSPGRAAGQGR*IRGLRGHRPGCEFW
Trigger: CCAGAACTCACAACCAGGTCTGTGTCCCCTAAGTCCTCGGATGCATCGTCCCTGCCCCGCTGCCCTCCCGGGAGATTGTAGGAGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 90 bp GTTTCTAGGGAAGAGTTTGCTTCCCCGGGGCTCCTCCTTCAGGGATaGCTGGGCCTGCTCATTGCAGCCTTCTCCCGGGACATCCAGCAC +
Preference number: 5 (lower is better)
Translates to: VSREEFASPGLLLQG*LGLLIAAFSRDIQH
Trigger: GTGCTGGATGTCCCGGGAGAAGGCTGCAATGAGCAGGCCCAGCCATCCCTGAAGGAGGAGCCCCGGGGAAGCAAACTCTTCCCTAGAAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 90 bp TTCTGGCTCTGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTTTCTTCACCTCCCTCACCCCGGCTG +
Preference number: 5 (lower is better)
Translates to: FWLCLLWLCDPRQGA*PLCVLVSSPPSPRL
Trigger: CAGCCGGGGTGAGGGAGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACACCCAAGGCAAGGGGCTaGGCCTCTCTGCGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTPKARG*ASLRLG
Trigger: ACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGG...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAGTGGATGGGCAGCTCTaGGTGGTACTGGACCTTCCA +
Preference number: 5 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAVDGQL*VVLDLP
Trigger: TGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS GCA 90 bp GGCCATGTCCCTGTTGCCTCTGGATCTGGTTGTGAGTTCTGGCTCTaGCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTC +
Preference number: 5 (lower is better)
Translates to: GHVPVASGSGCEFWL*LLWLCDPRQGAWPL
Trigger: GAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGATCCAGAGGCAACAGGGACATGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242607.13
ENST00000546425.1
ENST00000546713.5
ENST00000548312.5
ENST00000549442.5
CDS CCA 90 bp CCAGGTGGCCATGTCCCTGTTGCCTCTGGATCTGGTTGTGAGTTCTaGCTCTGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: PGGHVPVASGSGCEF*LCLLWLCDPRQGAW
Trigger: CCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGATCCAGAGGCAACAGGGACATGGCCACCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242607.13
ENST00000546425.1
ENST00000546713.5
ENST00000548312.5
ENST00000549442.5
CDS-3UTR CAA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTCCCAAGGCAAGGGGCTaGGCCTCTCTGCGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRPKARG*ASLRLG
Trigger: ACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGG...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
CDS-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAGAGATGATAATCCCATaGATGATCCGGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAEMIIP*MIRATR
Trigger: GCGGGTGGCCCGGATCATCAATGGGATTATCATCTC...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS GCA 90 bp CGCCACAGCCGGAGCAGAATCAGCAGGCCCAGAGCCTCAAACTGGTaGTCCTGGAACAGGAGGACAATGTCGAGGATGAATGAGACCACC +
Preference number: 5 (lower is better)
Translates to: RHSRSRISRPRASNW*SWNRRTMSRMNETT
Trigger: GGTGGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGAGGCTCTGGGCCTGCTGATTCTGCTCCGGCTGTGGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS CCA 90 bp CTTAGGGGACACAGACCTGGTTGTGAGTTCTGGCTCTGCCTCCTTTaGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTTG +
Preference number: 5 (lower is better)
Translates to: LRGHRPGCEFWLCLL*LCDPRQGAWPLCVL
Trigger: CAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGGTCTGTGTCCCCTAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 90 bp CGATGCATCCGAGGACTTAGGGGACACAGACCTGGTTGTGAGTTCTaGCTCTGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: RCIRGLRGHRPGCEF*LCLLWLCDPRQGAW
Trigger: CCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGGTCTGTGTCCCCTAAGTCCTCGGATGCATCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGTGGCCATGTCCCTGTaGCCTCTGGATCTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPVAMSL*PLDLVV
Trigger: CACAACCAGATCCAGAGGCAACAGGGACATGGCCAC...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS-3UTR CAA 90 bp CAGCACATTTTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATCAGCGGGAGCCACCTaGGCCCTGCGGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: QHILLQDFHGGCVRVEVGSAGAT*ALRVTA
Trigger: GGCAGTCACCCGCAGGGCCAAGGTGGCTCCCGCTGA...TCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAAAATGTGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGTGGATGGGCAGCTCTaGGTGGTACTGGACCTTCCA +
Preference number: 5 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPVDGQL*VVLDLP
Trigger: TGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACGGCACTGTAGCTAGCTaGCTCTCCGACTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHGTVAS*LSDWQA
Trigger: AGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCC...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CAA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGTGGTGGGGGCAATGTaGGAGGGAGTTCCACTGAGG +
Preference number: 5 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEVVGAM*EGVPLR
Trigger: CCTCAGTGGAACTCCCTCCAACATTGCCCCCACCAC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 90 bp AGCCGGAGCAGAATCAGCAGGCCCAGAGCCTCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCGAGGATGAATGAGACCACCACCACG +
Preference number: 5 (lower is better)
Translates to: SRSRISRPRASNWCS*NRRTMSRMNETTTT
Trigger: CGTGGTGGTGGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGAGGCTCTGGGCCTGCTGATTCTGCTCCGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS-3UTR CAA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGAGATGATAATCCCATaGATGATCCGGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTEMIIP*MIRATR
Trigger: GCGGGTGGCCCGGATCATCAATGGGATTATCATCTC...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp GTGGATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGACAGTGTCTTCTTTTaGAGGGGAGCTGGTCCGGGT +
Preference number: 5 (lower is better)
Translates to: VDGQLLVVLDLPQGCVHPDSVFF*RGAGPG
Trigger: ACCCGGACCAGCTCCCCTCAAAAAGAAGACACTGTC...TGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGCCTGGGTACCCCTTTaGGGGAAACTGAGACGAAGC +
Preference number: 5 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRAWVPL*GKLRRS
Trigger: GCTTCGTCTCAGTTTCCCCAAAAGGGGTACCCAGGC...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCATGTTGCCTCTGGATCTaGGTCTTACTCAAGCAGCTC +
Preference number: 5 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTACCLWI*VLLKQL
Trigger: GAGCTGCTTGAGTAAGACCAAGATCCAGAGGCAACA...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGGTGGCCATGTCCCTGTaGCCTCTGGATCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVVAMSL*PLDLGL
Trigger: AAGACCAAGATCCAGAGGCAACAGGGACATGGCCAC...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGTCAGCGGGAGCCACCTaGGCCCTGCGGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQSAGAT*ALRVTA
Trigger: GGCAGTCACCCGCAGGGCCAAGGTGGCTCCCGCTGA...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR CAA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACAGTGGATGGGCAGCTCTaGGTGGTACTGGACCTTCCA +
Preference number: 5 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTVDGQL*VVLDLP
Trigger: TGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp ATTTCTGCACCAGGCACTGTAGCTAGCTTGCTCTCCGACTGGCAGGCTGGTATGGCCTGGGTACCCCTTTaGGGGAAACTGAGACGAAGC +
Preference number: 5 (lower is better)
Translates to: ISAPGTVASLLSDWQAGMAWVPL*GKLRRS
Trigger: GCTTCGTCTCAGTTTCCCCAAAAGGGGTACCCAGGC...CATACCAGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCCTGGTGCAGAAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CAA 90 bp AAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAAAGTGCCTTAAGAACTaGCTCATCCTCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: KPNLSPSGPGGAAVPLVTKCLKN*LILSAG
Trigger: TCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACTT...TGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp ATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGAAGTGCCTTAAGAACTaGCTCATCCTCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: IKPNLSPSGPGGAAVPLVKCLKN*LILSAG
Trigger: TCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACTT...CACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS TCA 90 bp TGCGAGGTAGGTACATGCTTAACCTCATGGGACAGATGCGGAAACTaGGGCAGAGACAGGCCAAGTCACGAAGCTGAGCCTGCAAGATCC +
Preference number: 5 (lower is better)
Translates to: CEVGTCLTSWDRCGN*GRDRPSHEAEPARS
Trigger: GGATCTTGCAGGCTCAGCTTCGTGACTTGGCCTGTCTCTGCCTCAGTTTCCGCATCTGTCCCATGAGGTTAAGCATGTACCTACCTCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 90 bp TCCCTGTTGCCTCTGGATCTTGGTCTTACTCAAGCAGCTCCTAGTTaGTGGTGGGGCTGTCCGGAAATCCTGCAGATCTCAGATAGCCCT +
Preference number: 5 (lower is better)
Translates to: SLLPLDLGLTQAAPS*WWGCPEILQISDSP
Trigger: AGGGCTATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAAGACCAAGATCCAGAGGCAACAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGATCAGCGGGAGCCACCTaGGCCCTGCGGGTGACTGCC +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGSAGAT*ALRVTA
Trigger: GGCAGTCACCCGCAGGGCCAAGGTGGCTCCCGCTGA...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTAAGTGCCTTAAGAACTaGCTCATCCTCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRKCLKN*LILSAG
Trigger: TCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACTT...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp TATCAAACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGCTGAACTCAAGGTGTaGAATCTTGGCGGCCAATTG +
Preference number: 5 (lower is better)
Translates to: YQTKPLTKRPRRGSCSSRAELKV*NLGGQL
Trigger: CAATTGGCCGCCAAGATTCAACACCTTGAGTTCAGC...ACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGTTTGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp ACCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCGAAAATGTGATACATTaGATACAGTGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: TKPLTKRPRRGSCSSRDSENVIH*IQCGVG
Trigger: TCCCACCCCACACTGTATCAAATGTATCACATTTTC...GCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp CCAAACCTCTCACCAAGCGGCCCAGGAGGGGCAGCTGTTCCTCTCGTGACAGCAGAAAATGTGATACATTaGATACAGTGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: PNLSPSGPGGAAVPLVTAENVIH*IQCGVG
Trigger: TCCCACCCCACACTGTATCAAATGTATCACATTTTC...TGCTGTCACGAGAGGAACAGCTGCCCCTCCTGGGCCGCTTGGTGAGAGGTTTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp TGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACACATGGCCCCAATCACTCTaGTTCCTCAGCATCTCTGTC +
Preference number: 5 (lower is better)
Translates to: WQKTMEPPRSWLMQLGHTWPQSL*FLSISV
Trigger: GACAGAGATGCTGAGGAACAAGAGTGATTGGGGCCA...TGTGTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS TCA 90 bp CTCAAACTGGTGCTCCTGGAACAGGAGGACAATGTCGAGGATGAATaGGACCACCACCACGACGGCATCCAGGATCTCAAACTTGTGGTG +
Preference number: 5 (lower is better)
Translates to: LKLVLLEQEDNVEDE*DHHHDGIQDLKLVV
Trigger: CACCACAAGTTTGAGATCCTGGATGCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS TCA 90 bp GAGCCTCAAACTGGTGCTCCTGGAACAGGAGGACAATGTCGAGGATaGATGAGACCACCACCACGACGGCATCCAGGATCTCAAACTTGT +
Preference number: 5 (lower is better)
Translates to: EPQTGAPGTGGQCRG*MRPPPRRHPGSQTC
Trigger: ACAAGTTTGAGATCCTGGATGCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGAGGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS CCA 90 bp CTGTTGCCTCTGGATCTTGGTCTTACTCAAGCAGCTCCTAGTTGCTaGTGGGGCTGTCCGGAAATCCTGCAGATCTCAGATAGCCCTGAA +
Preference number: 5 (lower is better)
Translates to: LLPLDLGLTQAAPSC*WGCPEILQISDSPE
Trigger: TTCAGGGCTATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAAGACCAAGATCCAGAGGCAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp CTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCGTGGCCATGTCCCTGTaGCCTCTGGATCTGGTTGTG +
Preference number: 5 (lower is better)
Translates to: LQDFHGGCVRVEVGFFHSVAMSL*PLDLVV
Trigger: CACAACCAGATCCAGAGGCAACAGGGACATGGCCAC...GGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp AGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGCAGCTGGGGCACTGGAACCATGAACTTTaGGTAGTAACCTGGTGCCAG +
Preference number: 5 (lower is better)
Translates to: RWQKTMEPPRSWLMQLGHWNHEL*VVTWCQ
Trigger: CTGGCACCAGGTTACTACCAAAAGTTCATGGTTCCA...GTGCCCCAGCTGCATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 90 bp TTACTCAAGCAGCTCCTAGTTGCTGGTGGGGCTGTCCGGAAATCCTaGAGATCTCAGATAGCCCTGAACAACCTGAAGTTAAAGGTGCCC +
Preference number: 5 (lower is better)
Translates to: LLKQLLVAGGAVRKS*RSQIALNNLKLKVP
Trigger: GGGCACCTTTAACTTCAGGTTGTTCAGGGCTATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 90 bp TTGCCTCTGGATCTTGGTCTTACTCAAGCAGCTCCTAGTTGCTGGTaGGGCTGTCCGGAAATCCTGCAGATCTCAGATAGCCCTGAACAA +
Preference number: 5 (lower is better)
Translates to: LPLDLGLTQAAPSCW*GCPEILQISDSPEQ
Trigger: TTGTTCAGGGCTATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAAGACCAAGATCCAGAGGCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGGGCACTGTAGCTAGCTaGCTCTCCGACTGGCAGGCT +
Preference number: 5 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWGTVAS*LSDWQA
Trigger: AGCCTGCCAGTCGGAGAGCAAGCTAGCTACAGTGCC...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000242607.13
ENST00000620084.4
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGATGGCCTCTCTGCGTCTaGGTTTCTTCACCCGGCGCC +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGWPLCV*VSSPGA
Trigger: GGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCCA...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS-3UTR CAA 90 bp GATGGGCAGCTCTTGGTGGTACTGGACCTTCCACAAGGCTGTGTCCACCCAGAAGAAAATGTGATACATTaGATACAGTGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: DGQLLVVLDLPQGCVHPEENVIH*IQCGVG
Trigger: TCCCACCCCACACTGTATCAAATGTATCACATTTTC...TTCTGGGTGGACACAGCCTTGTGGAAGGTCCAGTACCACCAAGAGCTGCCCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS CCA 90 bp GGAGGGTGGAGGAAGCACTGGAACCATGAACTTTTGGTAGTAACCTaGTGCCAGGGGCTAAGCCTGTACACCAAGCATCTTATATCATCT +
Preference number: 5 (lower is better)
Translates to: GGWRKHWNHELLVVT*CQGLSLYTKHLISS
Trigger: AGATGATATAAGATGCTTGGTGTACAGGCTTAGCCCCTGGCACCAGGTTACTACCAAAAGTTCATGGTTCCAGTGCTTCCTCCACCCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp GTCGGATTCTTTCATTCCCATAGCCATCCGGAGAGAGCTTCTCCTTACAGGTTGAAGTGCCTTAAGAACTaGCTCATCCTCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: VGFFHSHSHPERASPYRLKCLKN*LILSAG
Trigger: TCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACTT...CAACCTGTAAGGAGAAGCTCTCTCCGGATGGCTATGGGAATGAAAGAATCCGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp TTACTCCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATGAGATGATAATCCCATaGATGATCCGGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: LLQDFHGGCVRVEVGFFHEMIIP*MIRATR
Trigger: GCGGGTGGCCCGGATCATCAATGGGATTATCATCTC...ATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGGAGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGGAGATGATAATCCCATaGATGATCCGGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMEMIIP*MIRATR
Trigger: GCGGGTGGCCCGGATCATCAATGGGATTATCATCTC...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp TGCTTCCTTCTCTCTCTTCTGTACACAGCACATTTTACTCCAGGACTTTCACGGTGGCCTCTCTGCGTCTaGGTTTCTTCACCTCCCTCA +
Preference number: 5 (lower is better)
Translates to: CFLLSLLYTAHFTPGLSRWPLCV*VSSPPS
Trigger: TGAGGGAGGTGAAGAAACCAAGACGCAGAGAGGCCA...CCGTGAAAGTCCTGGAGTAAAATGTGCTGTGTACAGAAGAGAGAGAAGGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp GGGGCAGCTGTTCCTCTCGTGACAGCACAGGCCCATGAGACAGTGTCTTCTTTTAAGTCTTTCAATTTCTaGTTCCTTCTCAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GAAVPLVTAQAHETVSSFKSFNF*FLLRAA
Trigger: AGCTGCTCTGAGAAGGAACAAGAAATTGAAAGACTT...AAAAGAAGACACTGTCTCATGGGCCTGTGCTGTCACGAGAGGAACAGCTGCCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAGTGGATGGGCAGCTCTaGGTGGTACTGGACCTTCCA +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGVDGQL*VVLDLP
Trigger: TGGAAGGTCCAGTACCACCAAGAGCTGCCCATCCAC...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAGCCTGGGTACCCCTTTaGGGGAAACTGAGACGAAGC +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGAWVPL*GKLRRS
Trigger: GCTTCGTCTCAGTTTCCCCAAAAGGGGTACCCAGGC...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp TGTACAGTAATTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTTTCTAGGGAAGAGTTaGCTTCCCCGGGGCTCCTCC +
Preference number: 5 (lower is better)
Translates to: CTVIEEKCCQVAENNGATFLGKS*LPRGSS
Trigger: GGAGGAGCCCCGGGGAAGCAAACTCTTCCCTAGAAA...GGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAATTACTGTACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGATGGCCTCTCTGCGTCTaGGTTTCTTCACCGCGTGCA +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGWPLCV*VSSPRA
Trigger: TGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCA...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439744.6
CDS GCA 90 bp TGGGGCCAAGTGGGGCCATCTGTGACACAGGGTCAGGAAGTTAGATaGTTGCAAATAAGCATTTCAGATGAGCCAGTCTACTTTCAAATG +
Preference number: 5 (lower is better)
Translates to: WGQVGPSVTQGQEVR*LQISISDEPVYFQM
Trigger: CATTTGAAAGTAGACTGGCTCATCTGAAATGCTTATTTGCAAGCATCTAACTTCCTGACCCTGTGTCACAGATGGCCCCACTTGGCCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546713.5
CDS-3UTR CAA 90 bp TTTTGTTCTCTTGTGATTGAAAACAGGCAGATGCTCTGTGTGATTTGTAATCTGCCCAAGGCAAGGGGCTaGGCCTCTCTGCGTCTTGGT +
Preference number: 5 (lower is better)
Translates to: FCSLVIENRQMLCVICNLPKARG*ASLRLG
Trigger: ACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGG...CAGATTACAAATCACACAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp GTAGTGGAATACCATGGCAGCATAGTTATTCTTGTCGGGCTGGATGATCTTCAGAAGTGCCTTAAGAACTaGCTCATCCTCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: VVEYHGSIVILVGLDDLQKCLKN*LILSAG
Trigger: TCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACTT...CTGAAGATCATCCAGCCCGACAAGAATAACTATGCTGCCATGGTATTCCACTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000547887.1
CDS-3UTR CAA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGAAGTGCCTTAAGAACTaGCTCATCCTCTCAGCGGGA +
Preference number: 5 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWKCLKN*LILSAG
Trigger: TCCCGCTGAGAGGATGAGCAAGTTCTTAAGGCACTT...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAGAGATGATAATCCCATaGATGATCCGGGCCACCCGC +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGEMIIP*MIRATR
Trigger: GCGGGTGGCCCGGATCATCAATGGGATTATCATCTC...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGGCTGAACTCAAGGTGTaGAATCTTGGCGGCCAATTG +
Preference number: 5 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWAELKV*NLGGQL
Trigger: CAATTGGCCGCCAAGATTCAACACCTTGAGTTCAGC...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp CCAGGACTTTCACGGTGGCTGTGTGAGAGTAGAAGTCGGATTCTTTCATTCCCAGCTTCTCCTTACAGGTaGATACAGCAAACTCATCAG +
Preference number: 5 (lower is better)
Translates to: PGLSRWLCESRSRILSFPASPYR*IQQTHQ
Trigger: CTGATGAGTTTGCTGTATCAACCTGTAAGGAGAAGC...TGGGAATGAAAGAATCCGACTTCTACTCTCACACAGCCACCGTGAAAGTCCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAGCTGAACTCAAGGTGTaGAATCTTGGCGGCCAATTG +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGAELKV*NLGGQL
Trigger: CAATTGGCCGCCAAGATTCAACACCTTGAGTTCAGC...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS-3UTR CAA 90 bp TTGAGGAAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGGAAAATGTGATACATTaGATACAGTGTGGGGTGGGA +
Preference number: 5 (lower is better)
Translates to: LRKNVVRWQKTMEPPRSWENVIH*IQCGVG
Trigger: TCCCACCCCACACTGTATCAAATGTATCACATTTTC...CCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTTCCTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp AAAAATGTTGTCAGGTGGCAGAAAACAATGGAGCCACCTAGAAGCTGGCTGATGAAGTCTTTCAATTTCTaGTTCCTTCTCAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: KNVVRWQKTMEPPRSWLMKSFNF*FLLRAA
Trigger: AGCTGCTCTGAGAAGGAACAAGAAATTGAAAGACTT...CATCAGCCAGCTTCTAGGTGGCTCCATTGTTTTCTGCCACCTGACAACATTTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000620084.4
CDS-3UTR CAA 90 bp TTTTGTTCTCTTGTGATTGAAAACAGGCAGATGCTCTGTGTGATTTGTAATCTGGCTGAACTCAAGGTGTaGAATCTTGGCGGCCAATTG +
Preference number: 5 (lower is better)
Translates to: FCSLVIENRQMLCVICNLAELKV*NLGGQL
Trigger: CAATTGGCCGCCAAGATTCAACACCTTGAGTTCAGC...CAGATTACAAATCACACAGAGCATCTGCCTGTTTTCAATCACAAGAGAACAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS CCA 90 bp CACATAGTTATTAACATACAGGGCTGGGATTCAAATGGTCTGATGTaGAATATCAGGCTACTTGGAGGTTTTGTGAAGTCCTTTTACAGC +
Preference number: 5 (lower is better)
Translates to: HIVINIQGWDSNGLM*NIRLLGGFVKSFYS
Trigger: GCTGTAAAAGGACTTCACAAAACCTCCAAGTAGCCTGATATTCCACATCAGACCATTTGAATCCCAGCCCTGTATGTTAATAACTATGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546425.1
CDS-3UTR CAA 90 bp GTGTTCAACATGAGAAAATGTGATACATTTGATACAGTGTGGGGTGGGAGTGGAAAGTCTTTCAATTTCTaGTTCCTTCTCAGAGCAGCT +
Preference number: 5 (lower is better)
Translates to: VFNMRKCDTFDTVWGGSGKSFNF*FLLRAA
Trigger: AGCTGCTCTGAGAAGGAACAAGAAATTGAAAGACTT...TCCACTCCCACCCCACACTGTATCAAATGTATCACATTTTCTCATGTTGAACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS GCA 90 bp ATCTTGGCGGCCAATTGTACATTCATCTGTTTTAACCTTAAGAGTTaGCGTTCTGAACGTGTCTTAACTGAGATGATAATCCCATTGATG +
Preference number: 5 (lower is better)
Translates to: ILAANCTFICFNLKS*RSERVLTEMIIPLM
Trigger: CATCAATGGGATTATCATCTCAGTTAAGACACGTTCAGAACGGCAACTCTTAAGGTTAAAACAGATGAATGTACAATTGGCCGCCAAGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000620084.4
CDS CAA 90 bp CTTTGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTaGGTTTCTTCACCCGGCGCCCCACCCGCCCGCGGTCACCGCTGC +
Preference number: 6 (lower is better)
Translates to: LWLCDPRQGAWPLCV*VSSPGAPPARGHRC
Trigger: GCAGCGGTGACCGCGGGCGGGTGGGGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS CAA 72 bp TGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTaGGTTTCTTCACCCGGCGCCCCACCCGCCCGCGGT +
Preference number: 6 (lower is better)
Translates to: CDPRQGAWPLCV*VSSPGAPPARG
Trigger: ACCGCGGGCGGGTGGGGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS GCA 72 bp TGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTaGGTCTTGGTTTCTTCACCCGGCGCCCCACCCGCC +
Preference number: 6 (lower is better)
Translates to: WLCDPRQGAWPL*VLVSSPGAPPA
Trigger: GGCGGGTGGGGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS GCA 72 bp GCCTTCTCCCGGGACATCCAGCACTGCCTCTGCCCCTaGTTCTCTCCTACAATCTCCCGGGAGGGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: AFSRDIQHCLCP*FSPTISREGSG
Trigger: CCCGCTGCCCTCCCGGGAGATTGTAGGAGAGAAGCAGGGGCAGAGGCAGTGCTGGATGTCCCGGGAGAAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CAA 90 bp CTTTGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTaGGTTTCTTCACCGCGTGCAGCCCCTGCCTGTCCTGGGCCGCCT +
Preference number: 6 (lower is better)
Translates to: LWLCDPRQGAWPLCV*VSSPRAAPACPGPP
Trigger: AGGCGGCCCAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS GCA 72 bp TGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTaGGTCTTGGTTTCTTCACCGCGTGCAGCCCCTGCC +
Preference number: 6 (lower is better)
Translates to: WLCDPRQGAWPL*VLVSSPRAAPA
Trigger: GGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS CCA 72 bp GAAGAGTTTGCTTCCCCGGGGCTCCTCCTTCAGGGATaGCTGGGCCTGCTCATTGCAGCCTTCTCCCGGGAC +
Preference number: 6 (lower is better)
Translates to: EEFASPGLLLQG*LGLLIAAFSRD
Trigger: GTCCCGGGAGAAGGCTGCAATGAGCAGGCCCAGCCATCCCTGAAGGAGGAGCCCCGGGGAAGCAAACTCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 72 bp GTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTTaGTTTCTTCACCGCGTGCAGCCCCTGCCTGTCCTG +
Preference number: 6 (lower is better)
Translates to: VTQGKGLGLSAS*FLHRVQPLPVL
Trigger: CAGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS GCA 72 bp CTACAATCTCCCGGGAGGGCAGCGGGGCAGGGACGATaGATCCGAGGACTTAGGGGACACAGACCTGGTTGT +
Preference number: 6 (lower is better)
Translates to: LQSPGRAAGQGR*IRGLRGHRPGC
Trigger: ACAACCAGGTCTGTGTCCCCTAAGTCCTCGGATGCATCGTCCCTGCCCCGCTGCCCTCCCGGGAGATTGTAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 72 bp TGGCTGTGTGACCCAAGGCAAGGGGCTTGGCCTCTCTaGGTCTTGGTTTCTTCACCTCCCTCACCCCGGCTG +
Preference number: 6 (lower is better)
Translates to: WLCDPRQGAWPL*VLVSSPPSPRL
Trigger: CAGCCGGGGTGAGGGAGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS CCA 72 bp TGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTTTCTTCACCCGGCGCC +
Preference number: 6 (lower is better)
Translates to: CLLWLCDPRQGA*PLCVLVSSPGA
Trigger: GGCGCCGGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000242607.13
CDS CAA 72 bp TGTGACCCAAGGCAAGGGGCTTGGCCTCTCTGCGTCTaGGTTTCTTCACCGCGTGCAGCCCCTGCCTGTCCT +
Preference number: 6 (lower is better)
Translates to: CDPRQGAWPLCV*VSSPRAAPACP
Trigger: AGGACAGGCAGGGGCTGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS GCA 72 bp CTGCTCATTGCAGCCTTCTCCCGGGACATCCAGCACTaGCTCTGCCCCTGCTTCTCTCCTACAATCTCCCGG +
Preference number: 6 (lower is better)
Translates to: LLIAAFSRDIQH*LCPCFSPTISR
Trigger: CCGGGAGATTGTAGGAGAGAAGCAGGGGCAGAGGCAGTGCTGGATGTCCCGGGAGAAGGCTGCAATGAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 72 bp GTGGGGGCAATGTTGGAGGGAGTTCCACTGAGGAACTaGTCTCCCCTCTCTGTCTTGGCGTTTACCCTGGCC +
Preference number: 6 (lower is better)
Translates to: VGAMLEGVPLRN*SPLSVLAFTLA
Trigger: GGCCAGGGTAAACGCCAAGACAGAGAGGGGAGAGCAGTTCCTCAGTGGAACTCCCTCCAACATTGCCCCCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 72 bp CTCTTTTGGCCCCGATGCAGTGGGCACTTCTCCACCTaGACATGTTCACCTCCAGGAGGCAGGCTGGGAAAG +
Preference number: 6 (lower is better)
Translates to: LFWPRCSGHFST*TCSPPGGRLGK
Trigger: CTTTCCCAGCCTGCCTCCTGGAGGTGAACATGTGCAGGTGGAGAAGTGCCCACTGCATCGGGGCCAAAAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546713.5
CDS CCA 72 bp TGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTTTCTTCACCGCGTGCA +
Preference number: 6 (lower is better)
Translates to: CLLWLCDPRQGA*PLCVLVSSPRA
Trigger: TGCACGCGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000439744.6
ENST00000546425.1
ENST00000549442.5
CDS CCA 72 bp TGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTTTCTTCACCAGGGGCT +
Preference number: 6 (lower is better)
Translates to: CLLWLCDPRQGA*PLCVLVSSPGA
Trigger: AGCCCCTGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000546713.5
CDS CAA 72 bp CTTAAGAACTTGCTCATCCTCTCAGCGGGAGCCACCTaGGCCCTGCGGGTGACTGCCTTTTCGTCCCAGGTG +
Preference number: 6 (lower is better)
Translates to: LKNLLILSAGAT*ALRVTAFSSQV
Trigger: CACCTGGGACGAAAAGGCAGTCACCCGCAGGGCCAAGGTGGCTCCCGCTGAGAGGATGAGCAAGTTCTTAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000546713.5
ENST00000547887.1
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS GCA 72 bp CCTGTTGCCTCTGGATCTGGTTGTGAGTTCTGGCTCTaGCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: PVASGSGCEFWL*LLWLCDPRQGA
Trigger: AGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGATCCAGAGGCAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242607.13
ENST00000546425.1
ENST00000546713.5
ENST00000548312.5
ENST00000549442.5
CDS GCA 72 bp CTTAGGGGACACAGACCTGGTTGTGAGTTCTGGCTCTaGCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCT +
Preference number: 6 (lower is better)
Translates to: LRGHRPGCEFWL*LLWLCDPRQGA
Trigger: AGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCAGAGCCAGAACTCACAACCAGGTCTGTGTCCCCTAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 72 bp TGCCTCCTTTGGCTGTGTGACCCAAGGCAAGGGGCTTaGCCTCTCTGCGTCTTGGTTTCTTCACCTCCCTCA +
Preference number: 6 (lower is better)
Translates to: CLLWLCDPRQGA*PLCVLVSSPPS
Trigger: TGAGGGAGGTGAAGAAACCAAGACGCAGAGAGGCCAAGCCCCTTGCCTTGGGTCACACAGCCAAAGGAGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS TCA 72 bp ACTGGTGCTCCTGGAACAGGAGGACAATGTCGAGGATaGATGAGACCACCACCACGACGGCATCCAGGATCT +
Preference number: 6 (lower is better)
Translates to: TGAPGTGGQCRG*MRPPPRRHPGS
Trigger: AGATCCTGGATGCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCACCAGT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS CAA 72 bp GACGGAGGGTGGAGGAAGCACTGGAACCATGAACTTTaGGTAGTAACCTGGTGCCAGGGGCTAAGCCTGTAC +
Preference number: 6 (lower is better)
Translates to: DGGWRKHWNHEL*VVTWCQGLSLY
Trigger: GTACAGGCTTAGCCCCTGGCACCAGGTTACTACCAAAAGTTCATGGTTCCAGTGCTTCCTCCACCCTCCGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS TCA 72 bp GTGCTCCTGGAACAGGAGGACAATGTCGAGGATGAATaGGACCACCACCACGACGGCATCCAGGATCTCAAA +
Preference number: 6 (lower is better)
Translates to: VLLEQEDNVEDE*DHHHDGIQDLK
Trigger: TTTGAGATCCTGGATGCCGTCGTGGTGGTGGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS GCA 72 bp CCTCTGGATCTTGGTCTTACTCAAGCAGCTCCTAGTTaGTGGTGGGGCTGTCCGGAAATCCTGCAGATCTCA +
Preference number: 6 (lower is better)
Translates to: PLDLGLTQAAPS*WWGCPEILQIS
Trigger: TGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAAGACCAAGATCCAGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 72 bp AGAATCAGCAGGCCCAGAGCCTCAAACTGGTGCTCCTaGAACAGGAGGACAATGTCGAGGATGAATGAGACC +
Preference number: 6 (lower is better)
Translates to: RISRPRASNWCS*NRRTMSRMNET
Trigger: GGTCTCATTCATCCTCGACATTGTCCTCCTGTTCCAGGAGCACCAGTTTGAGGCTCTGGGCCTGCTGATTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000549442.5
ENST00000620084.4
CDS TCA 72 bp CCCATAGCCATCCGGAGAGAGCTTCTCCTTACAGGTTaGTACAGCAAACTCATCAGTCCAGGGGCTTCTCAG +
Preference number: 6 (lower is better)
Translates to: PIAIRRELLLTG*YSKLISPGASQ
Trigger: CTGAGAAGCCCCTGGACTGATGAGTTTGCTGTATCAACCTGTAAGGAGAAGCTCTCTCCGGATGGCTATGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS GCA 72 bp CAGCTCCTAGTTGCTGGTGGGGCTGTCCGGAAATCCTaGAGATCTCAGATAGCCCTGAACAACCTGAAGTTA +
Preference number: 6 (lower is better)
Translates to: QLLVAGGAVRKS*RSQIALNNLKL
Trigger: TAACTTCAGGTTGTTCAGGGCTATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 72 bp GATCTTGGTCTTACTCAAGCAGCTCCTAGTTGCTGGTaGGGCTGTCCGGAAATCCTGCAGATCTCAGATAGC +
Preference number: 6 (lower is better)
Translates to: DLGLTQAAPSCW*GCPEILQISDS
Trigger: GCTATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAAGACCAAGATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CCA 72 bp CTGGATCTTGGTCTTACTCAAGCAGCTCCTAGTTGCTaGTGGGGCTGTCCGGAAATCCTGCAGATCTCAGAT +
Preference number: 6 (lower is better)
Translates to: LDLGLTQAAPSC*WGCPEILQISD
Trigger: ATCTGAGATCTGCAGGATTTCCGGACAGCCCCACCAGCAACTAGGAGCTGCTTGAGTAAGACCAAGATCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS CAA 72 bp TCCCATAGCCATCCGGAGAGAGCTTCTCCTTACAGGTaGATACAGCAAACTCATCAGTCCAGGGGCTTCTCA +
Preference number: 6 (lower is better)
Translates to: SHSHPERASPYR*IQQTHQSRGFS
Trigger: TGAGAAGCCCCTGGACTGATGAGTTTGCTGTATCAACCTGTAAGGAGAAGCTCTCTCCGGATGGCTATGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS CAA 90 bp TTCTTTCATTCCCATAGCCATCCGGAGAGAGCTTCTCCTTACAGGTaGATACAGCAAACTCATCAGTCCAGGGGCTTCTCAGAGCAGCTG +
Preference number: 6 (lower is better)
Translates to: FFHSHSHPERASPYR*IQQTHQSRGFSEQL
Trigger: CAGCTGCTCTGAGAAGCCCCTGGACTGATGAGTTTGCTGTATCAACCTGTAAGGAGAAGCTCTCTCCGGATGGCTATGGGAATGAAAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000548312.5
CDS CCA 72 bp AGGAAGCACTGGAACCATGAACTTTTGGTAGTAACCTaGTGCCAGGGGCTAAGCCTGTACACCAAGCATCTT +
Preference number: 6 (lower is better)
Translates to: RKHWNHELLVVT*CQGLSLYTKHL
Trigger: AAGATGCTTGGTGTACAGGCTTAGCCCCTGGCACCAGGTTACTACCAAAAGTTCATGGTTCCAGTGCTTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000356742.9
CDS GCA 72 bp GTGGGGCCATCTGTGACACAGGGTCAGGAAGTTAGATaGTTGCAAATAAGCATTTCAGATGAGCCAGTCTAC +
Preference number: 6 (lower is better)
Translates to: VGPSVTQGQEVR*LQISISDEPVY
Trigger: GTAGACTGGCTCATCTGAAATGCTTATTTGCAAGCATCTAACTTCCTGACCCTGTGTCACAGATGGCCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000546713.5
CDS TCA 72 bp TCTTGTTCCTTCTCAGAGCAGCTGAACTCAAGGTGTTaGATCTTGGCGGCCAATTGTACATTCATCTGTTTT +
Preference number: 6 (lower is better)
Translates to: SCSFSEQLNSRC*ILAANCTFICF
Trigger: AAAACAGATGAATGTACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAGCTGCTCTGAGAAGGAACAAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS CAA 72 bp TTCTTGTTCCTTCTCAGAGCAGCTGAACTCAAGGTGTaGAATCTTGGCGGCCAATTGTACATTCATCTGTTT +
Preference number: 6 (lower is better)
Translates to: FLFLLRAAELKV*NLGGQLYIHLF
Trigger: AAACAGATGAATGTACAATTGGCCGCCAAGATTCAACACCTTGAGTTCAGCTGCTCTGAGAAGGAACAAGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000620084.4
CDS GCA 72 bp GCCAATTGTACATTCATCTGTTTTAACCTTAAGAGTTaGCGTTCTGAACGTGTCTTAACTGAGATGATAATC +
Preference number: 6 (lower is better)
Translates to: ANCTFICFNLKS*RSERVLTEMII
Trigger: GATTATCATCTCAGTTAAGACACGTTCAGAACGGCAACTCTTAAGGTTAAAACAGATGAATGTACAATTGGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000242607.13
ENST00000356742.9
ENST00000439744.6
ENST00000548312.5
ENST00000620084.4