RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HUWE1 (Homo sapiens)

Ensembl gene IDs: ENSG00000086758

Ensembl transcript IDs: ENST00000218328.12, ENST00000262854.11, ENST00000342160.7, ENST00000426907.5, ENST00000446750.1, ENST00000463852.1, ENST00000468322.2, ENST00000471676.1, ENST00000474288.1, ENST00000474971.1, ENST00000480438.1, ENST00000488459.1, ENST00000489876.1, ENST00000612484.4, ENST00000622887.1

Found 2277 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GAAACAGGCGGCGGGGAGAGAATGAGAAGAGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGAT +
Preference number: 1 (lower is better)
Translates to: ETGGGERMRRGTGMR*GRWGSWDTHGELVD
Trigger: ATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCCTCTTCTCATTCTCTCCCCGCCGCCTGTTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CCA 90 bp GGCGGGGAGAGAATGAGAAGAGGAACAGGTATGCGCTGGGGAAGATaGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTAT +
Preference number: 1 (lower is better)
Translates to: GGERMRRGTGMRWGR*GSWDTHGELVDFIY
Trigger: ATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCCTCTTCTCATTCTCTCCCCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR TCA 90 bp AGCACTGGATGGAGTAAAAACCACAAGGGACTACAAGGTGATCTGTaGACAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAAC +
Preference number: 1 (lower is better)
Translates to: STGWSKNHKGLQGDL*TDWQTDDERGSDDN
Trigger: GTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTGTTCACAGATCACCTTGTAGTCCCTTGTGGTTTTTACTCCATCCAGTGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACATTTGTATAATGGCATCAGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATG +
Preference number: 2 (lower is better)
Translates to: LRTDASDWLDSDICIMASASASS*RTAAWM
Trigger: CATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGC...TGATGCCATTATACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
3UTR-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAGTTGCACCAGTGGTaGAGGCAGGTGGGCAAGCGG +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITKLHQW*RQVGKR
Trigger: CCGCTTGCCCACCTGCCTCCACCACTGGTGCAACTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAGTTGCACCAGTGGTaGAGGCAGGTGGGCAAGCGG +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPKLHQW*RQVGKR
Trigger: CCGCTTGCCCACCTGCCTCCACCACTGGTGCAACTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGAAGATGGGGCAGCTaGGACACACACGGTGAGTTG +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITGRWGS*DTHGEL
Trigger: CAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCTGAAGGAGGAAGTTaGACCAGTGGTGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITSEGGS*TSGGGR
Trigger: CCTGCCTCCACCACTGGTGCAACTTCCTCCTTCAGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTGAAGGAGGAAGTTaGACCAGTGGTGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPSEGGS*TSGGGR
Trigger: CCTGCCTCCACCACTGGTGCAACTTCCTCCTTCAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAAAGGGGAGAGAAGGTaGGGAAACAGGCGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSKGERR*GNRRRG
Trigger: TCCCCGCCGCCTGTTTCCTCACCTTCTCTCCCCTTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGTGMR*GRWGSW
Trigger: CCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGAAGTTGCACCAGTaGTGGAGGCAGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRKLHQ*WRQVGK
Trigger: CTTGCCCACCTGCCTCCACCACTGGTGCAACTTCCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp TATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCACAGACGCCTCTGACTaGCTAGACTCCGACATTTGT +
Preference number: 2 (lower is better)
Translates to: YLEHWEMAGPHPWVIPPSTDASD*LDSDIC
Trigger: ACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGT...GGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
3UTR-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAAGGGGAGAGAAGGTaGGGAAACAGGCGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKGERR*GNRRRG
Trigger: TCCCCGCCGCCTGTTTCCTCACCTTCTCTCCCCTTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACTGCTCATCTCTCCTaGCTGCAGAAACTGACTCTG +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITTAHLS*LQKLTL
Trigger: CAGAGTCAGTTTCTGCAGTCAGGAGAGATGAGCAGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCTGAAGGAGGAAGTTaGACCAGTGGTGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSEGGS*TSGGGR
Trigger: CCTGCCTCCACCACTGGTGCAACTTCCTCCTTCAGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGTGMR*GRWGSW
Trigger: CCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTAAAACACATGGGGTaGGGATCATGGACGGCATGG +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITLKHMG*GSWTAW
Trigger: CCATGCCGTCCATGATCCCCACCCCATGTGTTTTAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGGAAGTTGCACCAGTaGTGGAGGCAGGTGGGCAAG +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRKLHQ*WRQVGK
Trigger: CTTGCCCACCTGCCTCCACCACTGGTGCAACTTCCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGGGACACACACGGTaGGTTGGTGGATTTCATTTA +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPLGHTR*VGGFHL
Trigger: TAAATGAAATCCACCAACTCACCGTGTGTGTCCCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCGGCGGGGAGAGAATaGGAAGAGGAACAGGTATGC +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKAAGRE*EEEQVC
Trigger: GCATACCTGTTCCTCTTCTCATTCTCTCCCCGCCGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAAGGGGAGAGAAGGTaGGGAAACAGGCGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKGERR*GNRRRG
Trigger: TCCCCGCCGCCTGTTTCCTCACCTTCTCTCCCCTTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCAGCAAATCCTTCTaGACACAGAATCTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPCSKSF*TQNLRS
Trigger: GCTCCTCAGATTCTGTGTTCAGAAGGATTTGCTGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCAGCAAATCCTTCTaGACACAGAATCTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITCSKSF*TQNLRS
Trigger: GCTCCTCAGATTCTGTGTTCAGAAGGATTTGCTGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGTGMR*GRWGSW
Trigger: CCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCAGGGATGGTTTCCTaGAGAATCCATCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPAGMVS*RIHLFS
Trigger: GGAGAAAAGATGGATTCTCCAGGAAACCATCCCTGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCGGCGGGGAGAGAATaGGAAGAGGAACAGGTATGC +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAAGRE*EEEQVC
Trigger: GCATACCTGTTCCTCTTCTCATTCTCTCCCCGCCGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAAAGGGGAGAGAAGGTaGGGAAACAGGCGGCGGGGA +
Preference number: 2 (lower is better)
Translates to: PILSRIESLAVHINTFQAKGERR*GNRRRG
Trigger: TCCCCGCCGCCTGTTTCCTCACCTTCTCTCCCCTTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACTGCTCATCTCTCCTaGCTGCAGAAACTGACTCTG +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTAHLS*LQKLTL
Trigger: CAGAGTCAGTTTCTGCAGTCAGGAGAGATGAGCAGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCCTGCAAAGGCTACTaGCTTTTTAAAACACATGGG +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITPCKGY*LFKTHG
Trigger: CCCATGTGTTTTAAAAAGGCAGTAGCCTTTGCAGGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCCTGCAAAGGCTACTaGCTTTTTAAAACACATGGG +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPPCKGY*LFKTHG
Trigger: CCCATGTGTTTTAAAAAGGCAGTAGCCTTTGCAGGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGACAGACAGGTCCCTaGAAAGGCTACTGCCTTTTT +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGQTGP*KGYCLF
Trigger: AAAAAGGCAGTAGCCTTTGCAGGGACCTGTCTGTCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTGAAGGAGGAAGTTaGACCAGTGGTGGAGGCAGG +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSEGGS*TSGGGR
Trigger: CCTGCCTCCACCACTGGTGCAACTTCCTCCTTCAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PILSRIESLAVHINTFQAGTGMR*GRWGSW
Trigger: CCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTAAAACACATGGGGTaGGGATCATGGACGGCATGG +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLKHMG*GSWTAW
Trigger: CCATGCCGTCCATGATCCCCACCCCATGTGTTTTAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGTGATGCTTTGTCCTaGGCTGCAATCTCTAACACC +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGDALS*AAISNT
Trigger: GGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTGGGACACACACGGTaGGTTGGTGGATTTCATTTA +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLGHTR*VGGFHL
Trigger: TAAATGAAATCCACCAACTCACCGTGTGTGTCCCAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGAGTGCTCTTTATTTaGAACCTCCACAACACAGAC +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITRVLFI*NLHNTD
Trigger: GTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGAGTGCTCTTTATTTaGAACCTCCACAACACAGAC +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPRVLFI*NLHNTD
Trigger: GTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTAAAACACATGGGGTaGGGATCATGGACGGCATGG +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLKHMG*GSWTAW
Trigger: CCATGCCGTCCATGATCCCCACCCCATGTGTTTTAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCAGCAAATCCTTCTaGACACAGAATCTGAGGAGC +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCSKSF*TQNLRS
Trigger: GCTCCTCAGATTCTGTGTTCAGAAGGATTTGCTGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAATCTTGTCTCGCATTaGATCATTAGCTGTGCACAT +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPNLVSH*IISCAH
Trigger: ATGTGCACAGCTAATGATTCAATGCGAGACAAGATT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCCATTGTGAAAAGTaGGTTATGAAGAGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: EQGDALSWAAISNTITIPLHCEK*VMKSAL
Trigger: AAGAGCACTCTTCATAACTCACTTTTCACAATGGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTCCATTGTGAAAAGTaGGTTATGAAGAGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITLHCEK*VMKSAL
Trigger: AAGAGCACTCTTCATAACTCACTTTTCACAATGGAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAATTCCTGGTGAACTaGTCATCTCTCCTGACTGCA +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQFLVN*SSLLTA
Trigger: TGCAGTCAGGAGAGATGAGCAGTTCACCAGGAATTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTTTGTACAACCTGCTaGAGTTTGTTCCCCTTGAGC +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFCTTC*SLFPLS
Trigger: GCTCAAGGGGAACAAACTGCAGCAGGTTGTACAAAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCAGGGATGGTTTCCTaGAGAATCCATCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAGMVS*RIHLFS
Trigger: GGAGAAAAGATGGATTCTCCAGGAAACCATCCCTGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCCTGCAAAGGCTACTaGCTTTTTAAAACACATGGG +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPCKGY*LFKTHG
Trigger: CCCATGTGTTTTAAAAAGGCAGTAGCCTTTGCAGGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTGAGTTATGAAGAGTaGTCTTTATTTGAAACCTCC +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITVSYEE*SLFETS
Trigger: GGAGGTTTCAAATAAAGAGCACTCTTCATAACTCAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGTTTTGTACAACCTaGTGCAGTTTGTTCCCCTTG +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMFCTT*CSLFPL
Trigger: CAAGGGGAACAAACTGCAGCAGGTTGTACAAAACAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCACACGGTGAGTTGGTaGATTTCATTTATTGGTTTT +
Preference number: 2 (lower is better)
Translates to: PLEQGDALSWAAISNTITHTVSW*ISFIGF
Trigger: AAAACCAATAAATGAAATCCACCAACTCACCGTGTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCAGGGATGGTTTCCTaGAGAATCCATCTTTTCTCC +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKAGMVS*RIHLFS
Trigger: GGAGAAAAGATGGATTCTCCAGGAAACCATCCCTGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTGGGACACACACGGTaGGTTGGTGGATTTCATTTA +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLGHTR*VGGFHL
Trigger: TAAATGAAATCCACCAACTCACCGTGTGTGTCCCAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTGAACACAGAATCTaGGGAGCACACTGTTCAAAC +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSEHRI*GAHCSN
Trigger: GTTTGAACAGTGTGCTCCTCAGATTCTGTGTTCAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGAGTGCTCTTTATTTaGAACCTCCACAACACAGAC +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRVLFI*NLHNTD
Trigger: GTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAATCTTGTCTCGCATTaGATCATTAGCTGTGCACAT +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNLVSH*IISCAH
Trigger: ATGTGCACAGCTAATGATTCAATGCGAGACAAGATT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCCATTGTGAAAAGTaGGTTATGAAGAGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLHCEK*VMKSAL
Trigger: AAGAGCACTCTTCATAACTCACTTTTCACAATGGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCCTGCAAAGGCTACTaGCTTTTTAAAACACATGGG +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPCKGY*LFKTHG
Trigger: CCCATGTGTTTTAAAAAGGCAGTAGCCTTTGCAGGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGAGTTATGAAGAGTaGTCTTTATTTGAAACCTCC +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVSYEE*SLFETS
Trigger: GGAGGTTTCAAATAAAGAGCACTCTTCATAACTCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCACACGGTGAGTTGGTaGATTTCATTTATTGGTTTT +
Preference number: 2 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHTVSW*ISFIGF
Trigger: AAAACCAATAAATGAAATCCACCAACTCACCGTGTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTGAACACAGAATCTaGGGAGCACACTGTTCAAAC +
Preference number: 2 (lower is better)
Translates to: PILSRIESLAVHINTFQASEHRI*GAHCSN
Trigger: GTTTGAACAGTGTGCTCCTCAGATTCTGTGTTCAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGAGTGCTCTTTATTTaGAACCTCCACAACACAGAC +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRVLFI*NLHNTD
Trigger: GTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTCCATTGTGAAAAGTaGGTTATGAAGAGTGCTCTT +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLHCEK*VMKSAL
Trigger: AAGAGCACTCTTCATAACTCACTTTTCACAATGGAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CAA 90 bp GAAGAGTGCTCTTTATTTGAAACCTCCACAACACAGACGCCAATCTaGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAA +
Preference number: 2 (lower is better)
Translates to: EECSLFETSTTQTPI*SRIESLAVHINTFQ
Trigger: TTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGGCGTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATCTTGTCTCGCATTaGATCATTAGCTGTGCACAT +
Preference number: 2 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNLVSH*IISCAH
Trigger: ATGTGCACAGCTAATGATTCAATGCGAGACAAGATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTGAGTTATGAAGAGTaGTCTTTATTTGAAACCTCC +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVSYEE*SLFETS
Trigger: GGAGGTTTCAAATAAAGAGCACTCTTCATAACTCAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACACACGGTGAGTTGGTaGATTTCATTTATTGGTTTT +
Preference number: 2 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHTVSW*ISFIGF
Trigger: AAAACCAATAAATGAAATCCACCAACTCACCGTGTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACACACGGTGAGTTGGTaGATTTCATTTATTGGTTTT +
Preference number: 2 (lower is better)
Translates to: PILSRIESLAVHINTFQAHTVSW*ISFIGF
Trigger: AAAACCAATAAATGAAATCCACCAACTCACCGTGTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CCA 72 bp GGCGGGGAGAGAATGAGAAGAGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGGGACACACACGGTGAG +
Preference number: 3 (lower is better)
Translates to: GGERMRRGTGMR*GRWGSWDTHGE
Trigger: CTCACCGTGTGTGTCCCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCCTCTTCTCATTCTCTCCCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CCA 72 bp TATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATaGGTGATTCCTCCCTCCGGACAGACGCCTCTGACT +
Preference number: 3 (lower is better)
Translates to: YLEHWEMAGPHP*VIPPSGQTPLT
Trigger: AGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
3UTR-3UTR CAA 90 bp GATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACGCTAGACTCCGACATTaGTATAATGGCATCAGCCTC +
Preference number: 3 (lower is better)
Translates to: DGWSTSMGDSSLRTDASDARLRH*YNGISL
Trigger: GAGGCTGATGCCATTATACAAATGTCGGAGTCTAGC...GTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
3UTR CCA 72 bp GCAGGTGGGCAAGCGGGTAGGGCAGGGATGGTTTCCTaGAGAATCCATCTTTTCTCCAGATGCCTAGCATGT +
Preference number: 3 (lower is better)
Translates to: AGGQAGRAGMVS*RIHLFSRCLAC
Trigger: ACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACCATCCCTGCCCTACCCGCTTGCCCACCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CCA 72 bp ATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTaGCTAGACTCCGACATTTGTATAATGGCATCAGCC +
Preference number: 3 (lower is better)
Translates to: MGDSSLRTDASD*LDSDICIMASA
Trigger: GGCTGATGCCATTATACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
3UTR-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACACTGTTCAAACAGTaGGGACAGACAGGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: PLEQGDALSWAAISNTITTLFKQ*GQTGPC
Trigger: GCAGGGACCTGTCTGTCCCAACTGTTTGAACAGTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACACTGTTCAAACAGTaGGGACAGACAGGTCCCTGC +
Preference number: 3 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTLFKQ*GQTGPC
Trigger: GCAGGGACCTGTCTGTCCCAACTGTTTGAACAGTGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACACAGACGCCAATCTaGTCTCGCATTGAATCATTA +
Preference number: 3 (lower is better)
Translates to: PLEQGDALSWAAISNTITTQTPI*SRIESL
Trigger: TAATGATTCAATGCGAGACAAGATTGGCGTCTGTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACACAGACGCCAATCTaGTCTCGCATTGAATCATTA +
Preference number: 3 (lower is better)
Translates to: EQGDALSWAAISNTITIPTQTPI*SRIESL
Trigger: TAATGATTCAATGCGAGACAAGATTGGCGTCTGTGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGACACACACGGTGAGTaGGTGGATTTCATTTATTGG +
Preference number: 3 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDTHGE*VDFIYW
Trigger: CCAATAAATGAAATCCACCAACTCACCGTGTGTGTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACACAGACGCCAATCTaGTCTCGCATTGAATCATTA +
Preference number: 3 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTQTPI*SRIESL
Trigger: TAATGATTCAATGCGAGACAAGATTGGCGTCTGTGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGACACACACGGTGAGTaGGTGGATTTCATTTATTGG +
Preference number: 3 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKDTHGE*VDFIYW
Trigger: CCAATAAATGAAATCCACCAACTCACCGTGTGTGTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR TCA 72 bp AACCTCCACAACACAGACGCCAATCTTGTCTCGCATTaGATCATTAGCTGTGCACATCAACACATTCCAAGC +
Preference number: 3 (lower is better)
Translates to: NLHNTDANLVSH*IISCAHQHIPS
Trigger: GCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGGCGTCTGTGTTGTGGAGGTT
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CCA 72 bp ACCATCGAAGTCCTTAGATCAGCTTTAAGCACTGGATaGAGTAAAAACCACAAGGGACTACAAGGTGATCTG +
Preference number: 3 (lower is better)
Translates to: TIEVLRSALSTG*SKNHKGLQGDL
Trigger: CAGATCACCTTGTAGTCCCTTGTGGTTTTTACTCCATCCAGTGCTTAAAGCTGATCTAAGGACTTCGATGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGACACACACGGTGAGTaGGTGGATTTCATTTATTGG +
Preference number: 3 (lower is better)
Translates to: PILSRIESLAVHINTFQADTHGE*VDFIYW
Trigger: CCAATAAATGAAATCCACCAACTCACCGTGTGTGTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp TCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACTGGGCTCGCCGCTGCTaGTCGAGGTTGTATTCCCGC +
Preference number: 4 (lower is better)
Translates to: SMGDSSLRTDASDWLDSDWARRC*SRLYSR
Trigger: GCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCA...GTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR GCA 90 bp GAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: EMAGPHPWVIPPSGQTPLASASS*RTAAWM
Trigger: CATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGC...CAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp GATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACCAGCTTGGTGGTCTGTaGCTGCTCCTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: DGWSTSMGDSSLRTDASDQLGGL*LLLRQA
Trigger: GGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTG...GTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR TCA 90 bp GCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACCCGGACAGACGCCTCTaGCTGGCTAGACTCCGACAT +
Preference number: 4 (lower is better)
Translates to: ALGDGWSTSMGDSSLRTDPDRRL*LARLRH
Trigger: ATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGG...GTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCGGGGTCCGCGGCCCTaGTTCAGCCCTGCTTCAGCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRGPRP*FSPASA
Trigger: GGCTGAAGCAGGGCTGAAGCAGGGCCGCGGACCCCG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000262854.11
CDS-3UTR GCA 90 bp ATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTAGTGACAGGGGTGGGTaGAGTAGGGGGTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: MAGPHPWVIPPSGQTPLTSDRGG*SRGCGR
Trigger: ACGCCCACACCCCCTACTGCACCCACCCCTGTCACT...AGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGGGTGTGGGCGTGGTaGAGGCGGCAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGVWAW*RRQWWW
Trigger: CCACCACCACTGCCGCCTCCACCACGCCCACACCCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACGAGAGGGTTTCACATTaGGCTCGCCGCTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: DGWSTSMGDSSLRTDASDERVSH*ARRCCS
Trigger: CGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTC...GTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR GCA 90 bp GATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: DGWSTSMGDSSLRTDASDLVVCG*SSGRPS
Trigger: TGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAA...GTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp GAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGGCTGGTCCACATCCATaGGTGATTCCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: EMAGPHPWVIPPSGQTPLAGPHP*VIPPSG
Trigger: TCCGGAGGGAGGAATCACCCATGGATGTGGACCAGC...CAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCCTTAGGGTCCTCTaGCTGCGCCCGATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCLRVL*LRPMPW
Trigger: CCAGGGCATCGGGCGCAGTCAGAGGACCCTAAGGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCCTTAGGGTCCTCTaGCTGCGCCCGATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCLRVL*LRPMPW
Trigger: CCAGGGCATCGGGCGCAGTCAGAGGACCCTAAGGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGAGCAGACTGCGGATaGCCCAGTGGCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRADCG*PSGGSG
Trigger: CCCAGACCCGCCACTGGGTCATCCGCAGTCTGCTCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGAGCAGACTGCGGATaGCCCAGTGGCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRADCG*PSGGSG
Trigger: CCCAGACCCGCCACTGGGTCATCCGCAGTCTGCTCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCCTGCTTCAGCCCTaGTTCAGCCCTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPALLQP*FSPAPA
Trigger: GGCTGGAGCAGGGCTGAAGCAGGGCTGAAGCAGGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262854.11
CDS-3UTR GCA 90 bp ATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTCATTGGGCTCGCCGCTaGTGCTCGAGGTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: MAGPHPWVIPPSGQTPLTHWARR*CSRLYS
Trigger: GGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATG...AGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGGCATCCCCAGGAGTaGAGCTGCCTGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGHPQE*SCLLWA
Trigger: AGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTTGCCGAACAGCTGCCTaGATGCTGCTAGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: MAGPHPWVIPPSGQTPLTCRTAA*MLLAEP
Trigger: AGGCTCAGCTAGCAGCATCCAGGCAGCTGTTCGGCA...AGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCCGAGAGCCGAGGCTaGCAGACACAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPESRG*QTQHQR
Trigger: CCTCTGGTGTTGTGTCTGGCAGCCTCGGCTCTCGGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTCTGGATTGCGGCATaGGGCTGGCCCAAGGACACG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVWIAA*GWPKDT
Trigger: CGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGTGGACGTCATCGTTaGCTACCAGGAGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCGRHR*LPGGGP
Trigger: GGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGGGCTCGCCGCTGCTaGTCGAGGTTGTATTCCCGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPWARRC*SRLYSR
Trigger: GCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPASASS*RTAAWM
Trigger: CATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCACTCAGGTCAGGCTaGTGGAGGACCTCAGCCACC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPLRSG*WRTSAT
Trigger: GGTGGCTGAGGTCCTCCAGCAGCCTGACCTGAGTGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000342160.7
CDS-3UTR GCA 90 bp GATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACCGGAGGAACCTGCTCTaGATTTTGCCCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DGWSTSMGDSSLRTDASDRRNLL*ILPFSL
Trigger: CAAGCTGAAGGGCAAAATGCAGAGCAGGTTCCTCCG...GTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCGGGTCAGGGCTGTaGGGATGCTGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSGSGL*GCWTGF
Trigger: GAACCCTGTCCAGCATCCCCACAGCCCTGACCCGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGCGGGTCAGGGCTGTaGGGATGCTGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSGSGL*GCWTGF
Trigger: GAACCCTGTCCAGCATCCCCACAGCCCTGACCCGCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCACTTCCGCCACAGCTaGTGGGGCATCCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHFRHS*WGIPRS
Trigger: ACTCCTGGGGATGCCCCACCAGCTGTGGCGGAAGTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCACTTCCGCCACAGCTaGTGGGGCATCCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPHFRHS*WGIPRS
Trigger: ACTCCTGGGGATGCCCCACCAGCTGTGGCGGAAGTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGGGTGTGGGCGTGGTaGAGGCGGCAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGVWAW*RRQWWW
Trigger: CCACCACCACTGCCGCCTCCACCACGCCCACACCCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGCTTGGTGGTCTGTaGCTGCTCCTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQLGGL*LLLRQA
Trigger: GGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGCCCATCAGCAAGGTaGGTCGTGGACTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGPSAR*VVDCRR
Trigger: CCTACGGCAGTCCACGACCCACCTTGCTGATGGGCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGCATGGGCAGCAGTaGGTGCATGCAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRHGQQ*VHAAEV
Trigger: CACCTCTGCTGCATGCACTCACTGCTGCCCATGCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGTTGCTGGTTGACTTaGGGTTCCCGGCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCCWLT*GSRREP
Trigger: TGGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCAGTTGTTGCTGGTTaGCTTGAGGTTCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAVVAG*LEVPGG
Trigger: CCCGCCGGGAACCTCAAGTCAACCAGCAACAACTGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCAGTACTTCCTCCTaGATGGCTGGAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPASTSS*MAGGRA
Trigger: TGCCCTGCCTCCAGCCATTCAGGAGGAAGTACTGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACTGCTGGAGGACTGTaGGGAGCATGGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTAGGL*GAWATG
Trigger: GCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGGAGGCTCGTCCTTaGTGTGTGCCAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPEEARP*CVPAGS
Trigger: AGAGCCAGCTGGCACACATCAAGGACGAGCCTCCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAAGGGGAGAGAAGGTaGGGAAACAGGCGGCGGGGA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITKGERR*GNRRRG
Trigger: TCCCCGCCGCCTGTTTCCTCACCTTCTCTCCCCTTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCGGACAGACGCCTCTaGCTGGCTAGACTCCGACAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPDRRL*LARLRH
Trigger: ATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000426907.5
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCCCTGCTCCAGCCCTaGTCCAGCCCTGCTCCAGCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKALLQP*SSPAPA
Trigger: GGCTGGAGCAGGGCTGGAGCAGGGCTGGAGCAGGGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000262854.11
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCGCGGCAGGTGTCGGTaGTGTAGTGGTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRGRCR*CSGAGS
Trigger: GCTGCCAGCACCACTACAGCACCGACACCTGCCGCG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGGCAGGAAGGGCGATaGGGATACAGCAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGQEGR*GYSSWP
Trigger: TGGCCAACTGCTGTATCCGCATCGCCCTTCCTGCCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGCCTGCTCTGGGCTaGTCAGAACTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLPALG*SELPAA
Trigger: AGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCGGACAGGAGGCTTaGTCTCCCGCTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLGQEA*SPALWH
Trigger: ATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACGAGCCGAAGACCTTaGCGCCGCCTCCGCGGCTAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTSRRP*RRLRGY
Trigger: GTAGCCGCGGAGGCGGCGGCAAGGTCTTCGGCTCGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342160.7
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGGCTAGCTCTCCGCTaGCGCCTGCCGAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRLALR*RLPRPR
Trigger: CCGAGGCCTCGGCAGGCGCCAGCGGAGAGCTAGCCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000262854.11
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGTCCTCAGGTGGCTaGGCAGATTCCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLSSGG*ADSPDP
Trigger: TGGGTCAGGGGAATCTGCCCAGCCACCTGAGGACAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCAGAGGATGCAGGTaGGGAGCTGTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLRGCR*GAVLRW
Trigger: CCACCTGAGGACAGCTCCCCACCTGCATCCTCTGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCGCTGAGCTATTTGTaGAGGGGGCAGTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPALSYL*RGQSGL
Trigger: CAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAGCAGCTTGGGGATaGATGTGGACGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGAAWG*MWTVEP
Trigger: TGGCTCCACCGTCCACATCCATCCCCAAGCTGCTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGCCTCGAGGCTGTATaGAGAGGTTTCCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGLEAV*RGFPLT
Trigger: GGTGAGGGGGAAACCTCTCCATACAGCCTCGAGGCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGCCTCGAGGCTGTATaGAGAGGTTTCCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGLEAV*RGFPLT
Trigger: GGTGAGGGGGAAACCTCTCCATACAGCCTCGAGGCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTGAGGTGGCAGTGGTaGTGGAGGAAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLRWQW*WRKHRC
Trigger: GCAGCGGTGCTTCCTCCACCACCACTGCCACCTCAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGGCTGCAGTAGTACGTTaGCTGCATCCTCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: EHWEMAGPHPWVIPPSGQAAVVR*LHPLSL
Trigger: AAGGCTTAGAGGATGCAGCCAACGTACTACTGCAGC...CTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGAGGGTTTCACATTaGGCTCGCCGCTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPERVSH*ARRCCS
Trigger: CGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGAGGGTTTCACATTaGGCTCGCCGCTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITERVSH*ARRCCS
Trigger: CGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGTGMR*GRWGSW
Trigger: CCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACAGACGCCTCTGACTaGCTAGACTCCGACATTTGT +
Preference number: 4 (lower is better)
Translates to: EMAGPHPWVIPPSGQTPLTDASD*LDSDIC
Trigger: ACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGT...CAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGGTGCTGGCAGCATaGTGGCTCCTTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVVLAA*WLLLWR
Trigger: CCGCCAGAGAAGGAGCCATCATGCTGCCAGCACCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCTGGAGGCAGGGCTaGACCACTTCCAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAWRQG*TTSKSL
Trigger: CAAACTCTTGGAAGTGGTTCAGCCCTGCCTCCAGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCAGCCGAGGTACCCTaGGGAGAGTCAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSAEVP*GESASQ
Trigger: CTGTGATGCTGACTCTCCTCAGGGTACCTCGGCTGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCACGAAGGATGTAGTTaGTCTCCCGAGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPHEGCS*SPESRG
Trigger: GCCTCGGCTCTCGGGAGATCAACTACATCCTTCGTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGCCTCCCCATCCATaGTATCCCCATCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQPPHP*YPHLPP
Trigger: AGGTGGCAGATGGGGATATCATGGATGGGGAGGCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCATCTCTTGTGAACTaGGCACCTCAGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITASLVN*APQAAQ
Trigger: CTGGGCAGCCTGAGGTGCTCAGTTCACAAGAGATGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGCTGTCCTCTTCCTaGGTGTGCTCCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLLSSS*VCSSSS
Trigger: GGATGAGGAGGAGCACACTCAGGAAGAGGACAGCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCCTTAGGGTCCTCTaGCTGCGCCCGATGCCCTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCLRVL*LRPMPW
Trigger: CCAGGGCATCGGGCGCAGTCAGAGGACCCTAAGGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAGACTGCAGCTCCTaGGGAACCTCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGDCSS*GTSPKA
Trigger: AGCTTTGGGAGAGGTTCCTCAGGAGCTGCAGTCTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAGAGCCTTCTAGCTaGCTGCTGACAGCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGEPSS*LLTAVS
Trigger: ACTGACGGCTGTCAGCAGTCAGCTAGAAGGCTCTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGAACTGCCAGCTGCTaGAGTGTCACCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRTASC*SVTHSL
Trigger: GAGGCTGTGGGTGACACTTCAGCAGCTGGCAGTTCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCACCACTGCAGGCGCTaGGCTATTTGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHHCRR*AICGGG
Trigger: GCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACTACGGCGCAGGTCTaGGGGCAGAGTCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTTAQV*GQSLDE
Trigger: TTCATCCAGACTCTGCCCTCAGACCTGCGCCGTAGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGAGCAGACTGCGGATaGCCCAGTGGCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRADCG*PSGGSG
Trigger: CCCAGACCCGCCACTGGGTCATCCGCAGTCTGCTCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCGCTCACTGGCACTaGCTTCACGGAGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSAHWH*LHGVLA
Trigger: GGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGAGCTCCGGCGGATaGCTGGGTGTGACAACATGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPESSGG*LGVTTC
Trigger: ACATGTTGTCACACCCAGTCATCCGCCGGAGCTCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp TATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCCATTCAGTAGCAGCTTaGGAACAGTGTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: YLEHWEMAGPHPWVIPPSHSVAA*EQCPGS
Trigger: GGACCCGGGACACTGTTCTCAAGCTGCTACTGAATG...GGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCGGCGGGGAGAGAATaGGAAGAGGAACAGGTATGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAAGRE*EEEQVC
Trigger: GCATACCTGTTCCTCTTCTCATTCTCTCCCCGCCGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCGGCGGGGAGAGAATaGGAAGAGGAACAGGTATGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITAAGRE*EEEQVC
Trigger: GCATACCTGTTCCTCTTCTCATTCTCTCCCCGCCGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCACTCAGGTCAGGCTaGTGGAGGACCTCGCATCCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPLRSG*WRTSHP
Trigger: GGGATGCGAGGTCCTCCAGCAGCCTGACCTGAGTGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000262854.11
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGGGCAGCAGTGAGTaGATGCAGCAGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITMGSSE*MQQRCG
Trigger: GCCACACCTCTGCTGCATGCACTCACTGCTGCCCAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCGCGGCAGGTGTCGGTaGTGTAGTGGTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRGRCR*CSGAGS
Trigger: GCTGCCAGCACCACTACAGCACCGACACCTGCCGCG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTCAGCCATAGCCAGTaGCCGTCCAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLSHSQ*PSKGCF
Trigger: AAAGCAGCCCTTGGACGGGCACTGGCTATGGCTGAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGAGCACCTCAGGCTaGCCAGCAATCACCACTGAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLSTSG*PAITTE
Trigger: CTCAGTGGTGATTGCTGGGCAGCCTGAGGTGCTCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGAGCACCTCAGGCTaGCCAGCAATCACCACTGAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLSTSG*PAITTE
Trigger: CTCAGTGGTGATTGCTGGGCAGCCTGAGGTGCTCAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGTGGACGTCATCGTTaGCTACCAGGAGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCGRHR*LPGGGP
Trigger: GGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCTGGACAGGGTTCCTaGTTGGCTGGTAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAGQGS*LAGSCA
Trigger: AGCACAGCTACCAGCCAAGCAGGAACCCTGTCCAGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCCCAGGAGTGGAGCTaGCTGCTCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPQEWS*LLWAAQ
Trigger: CTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCCCAGGAGTGGAGCTaGCTGCTCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPQEWS*LLWAAQ
Trigger: CTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGACCCATCACTCCTaGCTTGCACTTCCGCCACAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLTHHS*LALPPQ
Trigger: CTGTGGCGGAAGTGCAAGGCAGGAGTGATGGGTCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGTTCTCGTCGCTGCTaGTCAGCTCTCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSRRC*SALCCA
Trigger: GGCACAGCAGAGAGCTGAGCAGCAGCGACGAGAACT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCGGAGGTGCTACTGTaGCCAAACAGACGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITAEVLL*PNRRSC
Trigger: GCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCGGAGGTGCTACTGTaGCCAAACAGACGCTCATGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAEVLL*PNRRSC
Trigger: GCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGGCTCGCCGCTGCTaGTCGAGGTTGTATTCCCGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWARRC*SRLYSR
Trigger: GCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLVVCG*SSGRPS
Trigger: TGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGACTCCGACGTTGCTaGTTGTTGCTGTCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRLRRC*LLLSPR
Trigger: GCGCGGAGACAGCAACAAGCAGCAACGTCGGAGTCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTCAGGTCAGGCTGCTaGAGGACCTCGCATCCCCTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLRSGC*RTSHPL
Trigger: GAGGGGATGCGAGGTCCTCCAGCAGCCTGACCTGAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000262854.11
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCAGAGGTGTGGCCTaGGCTGAGAGGGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSRGVA*AERVAS
Trigger: TGATGCTACCCTCTCAGCCCAGGCCACACCTCTGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCTGGGTCTTCGCTGTaGCACTGCTGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITAGSSL*HCCRSW
Trigger: CCAGCTTCTACAGCAGTGCCACAGCGAAGACCCAGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCGGGTCAGGGCTGTaGGGATGCTGGACAGGGTTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSGSGL*GCWTGF
Trigger: GAACCCTGTCCAGCATCCCCACAGCCCTGACCCGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGGCATCCCCAGGAGTaGAGCTGCCTGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGHPQE*SCLLWA
Trigger: AGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGGCATCCCCAGGAGTaGAGCTGCCTGCTCTGGGCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGHPQE*SCLLWA
Trigger: AGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATGGATGTGGACGGTaGAGCCACCGCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPDGCGR*SHRLHA
Trigger: AGCATGCAAGCGGTGGCTCCACCGTCCACATCCATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGATGGATGTGGACGGTaGAGCCACCGCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITDGCGR*SHRLHA
Trigger: AGCATGCAAGCGGTGGCTCCACCGTCCACATCCATC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGATCACTCACCTTCGCTaGAGATTTGCTGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: EMAGPHPWVIPPSGQTPLITHLR*RFAALS
Trigger: ACTAAGGGCAGCAAATCTCCAGCGAAGGTGAGTGAT...CAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCCGAACAGCTGCCTaGATGCTGCTAGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCRTAA*MLLAEP
Trigger: AGGCTCAGCTAGCAGCATCCAGGCAGCTGTTCGGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCTGGTCCACATCCATaGGTGATTCCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAGPHP*VIPPSG
Trigger: TCCGGAGGGAGGAATCACCCATGGATGTGGACCAGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp TCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTGGCTAGACGAGTATCTTGAGCACTaGGAGATGGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: STSMGDSSLRTDASDWLDEYLEH*EMAGPH
Trigger: ATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTC...GTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCCCGCTCTGTGGCATaGACCAGAAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSRSVA*TRKKAS
Trigger: CGAGGCCTTCTTTCTGGTCCATGCCACAGAGCGGGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGCAAGGTGGGTCGTaGACTGCCGTAGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQQGGS*TAVGSG
Trigger: ACCAGATCCTACGGCAGTCCACGACCCACCTTGCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAAGATGGGGCAGCTaGGACACACACGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGRWGS*DTHGEL
Trigger: CAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGAAGTTGCACCAGTaGTGGAGGCAGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRKLHQ*WRQVGK
Trigger: CTTGCCCACCTGCCTCCACCACTGGTGCAACTTCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCTTCTTCTGCGGCATaGTTAGACCTTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITASSAA*LDLGGG
Trigger: TCCTCCCCCAAGGTCTAATCATGCCGCAGAAGAAGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTCTTCGGCCTGCAGTaGATCGCACGCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFFGLQ*IARLSL
Trigger: GAGAGACAAGCGTGCGATTCACTGCAGGCCGAAGAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATTTGTGGTCCCGGGTaGGCCTCAGACAGAGACGAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITICGPG*ASDRDE
Trigger: TTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGTGAGACGAGTTGTTaGAGAGCCACTGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGETSC*RATAQC
Trigger: ACACTGGGCAGTGGCTCTTCAACAACTCGTCTCACC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCATCAGAACGGGCGATaGTGTGGACGTCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPHQNGR*CGRHRC
Trigger: GCAACGATGACGTCCACATCATCGCCCGTTCTGATG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTTCTAGCTGACTGCTaGCAGCCGTCAGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLLADC*QPSVHQ
Trigger: CTGATGCACTGACGGCTGTCAGCAGTCAGCTAGAAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCCAGTACTTCCTCCTaGATGGCTGGAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVASTSS*MAGGRA
Trigger: TGCCCTGCCTCCAGCCATTCAGGAGGAAGTACTGGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGTCCGCTGCTGTGTaGAGTGGCTGGGAAATACCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWSAAV*SGWEIP
Trigger: AGGTATTTCCCAGCCACTTCACACAGCAGCGGACCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACTGCTGGAGGACTGTaGGGAGCATGGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTAGGL*GAWATG
Trigger: GCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTGACAACATGTTCATaGGCTGCCCCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVTTCS*AAPVER
Trigger: CCTCTCCACTGGGGCAGCTCATGAACATGTTGTCAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp TATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGTAGCTGGTTTTCAGTaGGGCCAGAGGACACCATCT +
Preference number: 4 (lower is better)
Translates to: YLEHWEMAGPHPWVIPPSVAGFQ*GQRTPS
Trigger: AGATGGTGTCCTCTGGCCTCACTGAAAACCAGCTAC...GGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCATTCAGTAGCAGCTTaGGAACAGTGTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHSVAA*EQCPGS
Trigger: GGACCCGGGACACTGTTCTCAAGCTGCTACTGAATG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCGGACAGACGCCTCTaGCTGGCTAGACTCCGACGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPDRRL*LARLRR
Trigger: ACGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAGATGTGCATAGATaGGGGCTCCCGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGDVHR*GLPGEE
Trigger: TTCTTCTCCCGGGAGCCCTCATCTATGCACATCTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGTCTGGCCTGAACTaGCTGCAATCGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQSGLN*LQSLPV
Trigger: CACAGGAAGCGATTGCAGGCAGTTCAGGCCAGACTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGGAGCAGTGGCAGTaGCATCTGCCTTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITEEQWQ*HLPSGL
Trigger: CAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGCCTGCTCCATGGTaGTGGTGTTCAACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWPAPW*WCSTVP
Trigger: AGGCACTGTTGAACACCAGCACCATGGAGCAGGCCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGGTACTCTGTGGCCTaGTCCATGGTGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRYSVA*SMVLVF
Trigger: GAACACCAGCACCATGGAGCAGGCCACAGAGTACCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCTCTTCCTCCTCCTaGTTTTCCCGAGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPASSSS*FSRAFR
Trigger: ACGGAAAGCTCGGGAAAAGCAGGAGGAGGAAGAGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTCTGGATTGCGGCATaGGGCTGGCCCAAGGACACG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVWIAA*GWPKDT
Trigger: CGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGCAGGAAGGGCGATaGGGATACAGCAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGQEGR*GYSSWP
Trigger: TGGCCAACTGCTGTATCCGCATCGCCCTTCCTGCCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCCTCCTGCACTTCTaGTTCCCCAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLLLHF*FPRLAW
Trigger: CCAGGCGAGCCTGGGGAAGCAGAAGTGCAGGAGGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCCTCCTGCACTTCTaGTTCCCCAGGCTCGCCTGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLLLHF*FPRLAW
Trigger: CCAGGCGAGCCTGGGGAAGCAGAAGTGCAGGAGGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCTTCTCGGTTGGCCTaGAAGGTGGAAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSSRLA*KVEAWL
Trigger: CAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGTGGACGTCATCGTTaGCTACCAGGAGGCGGGCCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCGRHR*LPGGGP
Trigger: GGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCCCAGGAGTGGAGCTaGCTGCTCTGGGCTGCTCAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPQEWS*LLWAAQ
Trigger: CTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATTCCTCGGGAATCTaGTCCAGAAATGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPDSSGI*SRNGHG
Trigger: GCCGTGGCCATTTCTGGAGCAGATTCCCGAGGAATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCTGCTCAGCTCTCTaGTGTGCCAGTACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCCSAL*CASTSS
Trigger: GGAGGAAGTACTGGCACAGCAGAGAGCTGAGCAGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCTAGTTCTCGTCGCTaGTGCTCAGCTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITASSRR*CSALCC
Trigger: ACAGCAGAGAGCTGAGCAGCAGCGACGAGAACTAGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGCTTGAGCCTCAGCTaGAATGTCAGGTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGLSLS*NVRWHH
Trigger: GTGATGCCACCTGACATTGCAGCTGAGGCTCAAGCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGAATAGCAGAGAGTaGGGAGGTGCTACTGTGCCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPENSRE*GGATVP
Trigger: GGGCACAGTAGCACCTCCGCACTCTCTGCTATTCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCTCACTGCTGCGCTaGAAGATGGAGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLSLLR*KMESRL
Trigger: CAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GATTCCTCCCTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACATTTGTATAAGTCTGTACTGCTGCTaGCCCCATCACTCACCTTCG +
Preference number: 4 (lower is better)
Translates to: DSSLRTDASDWLDSDICISLYCC*PHHSPS
Trigger: CGAAGGTGAGTGATGGGGGCAGCAGCAGTACAGACT...TATACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGGCTCGCCGCTGCTaGTCGAGGTTGTATTCCCGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWARRC*SRLYSR
Trigger: GCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCGGAGGAACCTAGCCTaGCTGTCTGCTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRRNLA*LSAWLS
Trigger: AGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSASASS*RTAAWM
Trigger: CATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCTAGACTCCGACGTTaGTGCTTGTTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITARLRR*CLLLSP
Trigger: CGGAGACAGCAACAAGCAGCAACGTCGGAGTCTAGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCGTCCAAACTCAGCTaGTCGCTGAGCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSKLS*SLSRGN
Trigger: GTTACCCCTGCTCAGCGAGCAGCTGAGTTTGGACGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAGCCGCCAACTGCTTaGGGATGGCTCCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITKPPTA*GWLLSF
Trigger: GAATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAGAAAGCCGCCAACTaGTTGCGGATGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPKKAAN*LRMAPV
Trigger: GACAGGAGCCATCCGCAAGCAGTTGGCGGCTTTCTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGTGGCCTGCTCCATaGTGCTGGTGTTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLWPAP*CWCSTV
Trigger: CACTGTTGAACACCAGCACCATGGAGCAGGCCACAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGCCTGGGGCAGTGTaGCCATCTGACTTATCCACT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRPGAV*PSDLST
Trigger: AGTGGATAAGTCAGATGGCCACACTGCCCCAGGCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAACTGTGGTCTGCATaGCGCACCATCAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITELWSA*RTISGW
Trigger: CCATCCACTGATGGTGCGCCATGCAGACCACAGTTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAACTGTGGTCTGCATaGCGCACCATCAGTGGATGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPELWSA*RTISGW
Trigger: CCATCCACTGATGGTGCGCCATGCAGACCACAGTTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAACGGGCGATGATGTaGACGTCATCGTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPERAMM*TSSLPT
Trigger: GGTAGGCAACGATGACGTCCACATCATCGCCCGTTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGGCTGTGGGGATGCTaGACAGGGTTCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGLWGC*TGFLLG
Trigger: GCCAAGCAGGAACCCTGTCCAGCATCCCCACAGCCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGGCTGTGGGGATGCTaGACAGGGTTCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGLWGC*TGFLLG
Trigger: GCCAAGCAGGAACCCTGTCCAGCATCCCCACAGCCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCTCCCAAAGCTGGTaGGGTTGGGAGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLSQSW*GWECWL
Trigger: CAACCAACACTCCCAACCCCACCAGCTTTGGGAGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTCCGCCACAGCTGGTaGGGCATCCCCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFRHSW*GIPRSG
Trigger: TCCACTCCTGGGGATGCCCCACCAGCTGTGGCGGAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCACTTCCGCCACAGCTaGTGGGGCATCCCCAGGAGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHFRHS*WGIPRS
Trigger: ACTCCTGGGGATGCCCCACCAGCTGTGGCGGAAGTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTGTCCTCAGGTGGCTaGGCAGATTCCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLSSGG*ADSPDP
Trigger: TGGGTCAGGGGAATCTGCCCAGCCACCTGAGGACAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCACGGCAGAATCTCTaGTGGAAGAGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPRQNL*WKSSQR
Trigger: CCTCTGAGAGCTCTTCCACCAGAGATTCTGCCGTGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTCCTCCTGAATGGCTaGAGGCAGGGCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFLLNG*RQGSQK
Trigger: TTTCTGGCTGCCCTGCCTCCAGCCATTCAGGAGGAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTGAGGGCAGAGTCTaGATGAAGGTCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSEGRV*MKVTGS
Trigger: GGACCCTGTGACCTTCATCCAGACTCTGCCCTCAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCAAGGCGAGTATACTaGACCCCACGGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITARRVY*TPRLPL
Trigger: AAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCATGAGCTGCCCCAGTaGAGAGGCCTCGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHELPQ*RGLEAV
Trigger: TACAGCCTCGAGGCCTCTCCACTGGGGCAGCTCATG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGGTGGCAGTGGTGGTaGAGGAAGCACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRWQWW*RKHRCQ
Trigger: CTGGCAGCGGTGCTTCCTCCACCACCACTGCCACCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGGGTGTGGGCGTGGTaGAGGCGGCAGTGGTGGTGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGVWAW*RRQWWW
Trigger: CCACCACCACTGCCGCCTCCACCACGCCCACACCCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGCTTGGTGGTCTGTaGCTGCTCCTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQLGGL*LLLRQA
Trigger: GGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACATTTGTATAATGGCATCATGCCCTTCAGCTTGGTaGTCTGTGGCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LRTDASDWLDSDICIMASCPSAW*SVAAPQ
Trigger: CTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCA...TGATGCCATTATACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTGTCGTCCCGGAGCTaGATGATGACCTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVSSRS*MMTCST
Trigger: GGTACTACAGGTCATCATCCAGCTCCGGGACGACAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACAGACGCCTCTGACTaGCTAGACTCCGACGTTGCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTDASD*LDSDVA
Trigger: AGCAACGTCGGAGTCTAGCCAGTCAGAGGCGTCTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTCCTTCTCCCCCTGTaGGGTTCCATCGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFLLPL*GSIGGN
Trigger: ATTGCCTCCGATGGAACCCCACAGGGGGAGAAGGAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCTCTCCCGCTCTGTaGCATGGACCAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCSPAL*HGPERR
Trigger: CCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAGTTGCACCAGTGGTaGAGGCAGGTGGGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKLHQW*RQVGKR
Trigger: CCGCTTGCCCACCTGCCTCCACCACTGGTGCAACTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTTCCCGAACCTTCCTaGCCAAGTTGGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLPEPS*PSWPAG
Trigger: ACCAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCAGTGGCAAACTGGTaGGGGTATGGATCCATGGAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAVANW*GYGSME
Trigger: TTCCATGGATCCATACCCTCACCAGTTTGCCACTGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTCTCGCAACAACACTaGGCCCCCAGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFSQQH*APRGFN
Trigger: ATTGAATCCCCTGGGGGCTCAGTGTTGTTGCGAGAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGGCATGGGCAGCAGTaGGTGCATGCAGCAGAGGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRHGQQ*VHAAEV
Trigger: CACCTCTGCTGCATGCACTCACTGCTGCCCATGCCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACACTCAGACCCAATTaGGAGCCCCACTGGTTTACG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTLRPN*EPHWFT
Trigger: CGTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCTGTTCCCCATCTaGTCTTTTTCCGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITILFPI*SFSALG
Trigger: ACCCAGGGCGGAAAAAGATCAGATGGGGAACAGGAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTGGTGCTGGCAGCATaGTGGCTCCTTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVVLAA*WLLLWR
Trigger: CCGCCAGAGAAGGAGCCATCATGCTGCCAGCACCAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCATCAGGCAAGTCTaGGTGTTCCAATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAIRQV*VFQSLR
Trigger: TCTGAGGGATTGGAACACTCAGACTTGCCTGATGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGTTGCTGGTTGACTTaGGGTTCCCGGCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCCWLT*GSRREP
Trigger: TGGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCAGTTGTTGCTGGTTaGCTTGAGGTTCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAVVAG*LEVPGG
Trigger: CCCGCCGGGAACCTCAAGTCAACCAGCAACAACTGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCAGTTGTTGCTGGTTaGCTTGAGGTTCCCGGCGGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFAVVAG*LEVPGG
Trigger: CCCGCCGGGAACCTCAAGTCAACCAGCAACAACTGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCCTGGAGGCAGGGCTaGACCACTTCCAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAWRQG*TTSKSL
Trigger: CAAACTCTTGGAAGTGGTTCAGCCCTGCCTCCAGGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCAGCCGAGGTACCCTaGGGAGAGTCAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSAEVP*GESASQ
Trigger: CTGTGATGCTGACTCTCCTCAGGGTACCTCGGCTGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACCTTTTCCATGGTATaGCGAAGGGTACAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTFSMV*RRVQGS
Trigger: GGACCCCTGTACCCTTCGTCATACCATGGAAAAGGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGATGACAGGCAGAGGTaGGGGCTTCAAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDDRQR*GLQRGG
Trigger: ACCACCCCTTTGAAGCCCTCACCTCTGCCTGTCATC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCAAAGTCACTGCTCTaGCGCGTAAGTGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSKSLL*RVSDRY
Trigger: GTACCGGTCACTTACGCGTCAGAGCAGTGACTTTGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCACTGCAGTCCTCTTTaGTCAGTTCAGACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHCSPL*SVQTGP
Trigger: TGGGCCAGTCTGAACTGATCAAAGAGGACTGCAGTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCACCTCTGTCTGAGTaGCATCATGATCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPPLSE*HHDPPP
Trigger: AGGAGGAGGATCATGATGTCACTCAGACAGAGGTGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGTGGAAGCTTGGCTaGGGTTGGAAGGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRWKLG*GWKELH
Trigger: ATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCCCGATGCCCTGGGTaGGACGAGTTGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSARCPG*DELLKS
Trigger: GCTCTTCAACAACTCGTCTCACCCAGGGCATCGGGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTCTCTGGGGAAAGTaGGGTTATAGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSLWGK*GYSGSW
Trigger: CCAGCTCCCACTATAACCTCACTTTCCCCAGAGAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACACCACTGCAGGCGCTaGGCTATTTGTGGAGGGGGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHHCRR*AICGGG
Trigger: GCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTTCTCATGGCTACTTaGCCCACAGCTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVLMAT*PTALAR
Trigger: TCGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACTGCTGGAGGACTGTaGGGAGCATGGGCTACAGGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTAGGL*GAWATG
Trigger: GCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCGCTCACTGGCACTaGCTTCACGGAGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSAHWH*LHGVLA
Trigger: GGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGAGCTCCGGCGGATaGCTGGGTGTGACAACATGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVESSGG*LGVTTC
Trigger: ACATGTTGTCACACCCAGTCATCCGCCGGAGCTCTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGAGTAGTGGGAGAAATTaGAACAGTAGTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: EHWEMAGPHPWVIPPSGQSSGRN*NSSGSS
Trigger: ACTGCTACCACTACTGTTTCAATTTCTCCCACTACT...CTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTAGCTGGTTTTCAGTaGGGCCAGAGGACACCATCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVAGFQ*GQRTPS
Trigger: AGATGGTGTCCTCTGGCCTCACTGAAAACCAGCTAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTAGCTGGTTTTCAGTaGGGCCAGAGGACACCATCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVAGFQ*GQRTPS
Trigger: AGATGGTGTCCTCTGGCCTCACTGAAAACCAGCTAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCGGACAGACGCCTCTaGCTGGCTAGACTCCGACGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPDRRL*LARLRR
Trigger: ACGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAACTCAGCTGCTCGCTaGGCAGGGGTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVNSAAR*AGVTQV
Trigger: CACCTGAGTTACCCCTGCTCAGCGAGCAGCTGAGTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAGGAGGCTCGTCCTTaGTGTGTGCCAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFEEARP*CVPAGS
Trigger: AGAGCCAGCTGGCACACATCAAGGACGAGCCTCCTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGGAGGCTCGTCCTTaGTGTGTGCCAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSEEARP*CVPAGS
Trigger: AGAGCCAGCTGGCACACATCAAGGACGAGCCTCCTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGCGGCAGGTGTCGGTaGTGTAGTGGTGCTGGCAGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRGRCR*CSGAGS
Trigger: GCTGCCAGCACCACTACAGCACCGACACCTGCCGCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGCCACCTTCCTCTTaGCCTGTATCCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITEPPSS*PVSSSP
Trigger: AGGAGAAGAGGATACAGGGCAAGAGGAAGGTGGCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGGGACTCCCAGCATaGTCACGCAGGCCCGGATTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQGLPA*SRRPGL
Trigger: TAATCCGGGCCTGCGTGAGCATGCTGGGAGTCCCTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCCGAGAGCCGAGGCTaGCAGACACAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPESRG*QTQHQR
Trigger: CCTCTGGTGTTGTGTCTGGCAGCCTCGGCTCTCGGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTCTGGATTGCGGCATaGGGCTGGCCCAAGGACACG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVWIAA*GWPKDT
Trigger: CGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGGCAGGAAGGGCGATaGGGATACAGCAGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGQEGR*GYSSWP
Trigger: TGGCCAACTGCTGTATCCGCATCGCCCTTCCTGCCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCATCACCCATGTCTTaGAGGAGCTGGCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSPMS*RSWPTS
Trigger: AGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGGGAGGTCCCAGATaGGGAAGTCTCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLGGPR*GSLSGG
Trigger: GCCTCCACTGAGACTTCCGCATCTGGGACCTCCCAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATCTGTGCCACTCCCTaGAGCAGCCAGGCTTGCGAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSICATP*SSQACE
Trigger: CTCGCAAGCCTGGCTGCTGCAGGGAGTGGCACAGAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTGAGCACCTCAGGCTaGCCAGCAATCACCACTGAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLSTSG*PAITTE
Trigger: CTCAGTGGTGATTGCTGGGCAGCCTGAGGTGCTCAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTGAGGATTGCAGAGTaGCAAGGGTCTCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVRIAE*QGSPWT
Trigger: AGTCCAAGGAGACCCTTGGCACTCTGCAATCCTCAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCTGTTGTGAGGATTaGAGAGTGCCAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCCCED*RVPRVS
Trigger: GGAGACCCTTGGCACTCTGCAATCCTCACAACAGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCTGTTGTGAGGATTaGAGAGTGCCAAGGGTCTCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCCCED*RVPRVS
Trigger: GGAGACCCTTGGCACTCTGCAATCCTCACAACAGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTGCCTGCTCTGGGCTaGTCAGAACTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLPALG*SELPAA
Trigger: AGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAGGTGCCACCTCTCTaGACAGCAAGGCGAGTATAC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITKVPPL*TARRVY
Trigger: GTATACTCGCCTTGCTGTGCAGAGAGGTGGCACCTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCCCCATCTGGAAGGTaGCACCTCTCTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPPSGR*HLSAQQ
Trigger: TTGCTGTGCAGAGAGGTGGCACCTTCCAGATGGGGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGTGGAGCCACCGCTTaGATGCTTCTCGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGGATA*MLLGMF
Trigger: AAACATACCGAGAAGCATGCAAGCGGTGGCTCCACC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTTTCTTTGGTCCGCTaGTGTGTGAAGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVSLVR*CVKWLG
Trigger: TCCCAGCCACTTCACACAGCAGCGGACCAAAGAAAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGTATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCACCTGCTCTGCATTTTaGCCTTCAGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EYLEHWEMAGPHPWVIPPTCSAF*PSAWWS
Trigger: AGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGT...GGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCTAGCCTGCCTGTCTaGTTGGCTTTCTTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPPSLPV*LAFLLA
Trigger: GGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKASASS*RTAAWM
Trigger: CATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGACTCCGACGTTGCTaGTTGTTGCTGTCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRLRRC*LLLSPR
Trigger: GCGCGGAGACAGCAACAAGCAGCAACGTCGGAGTCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCACTAGCACCGCATaGTGGTCATGGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSTSTA*WSWDSS
Trigger: AGAGGAATCCCATGACCAGCATGCGGTGCTAGTGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCGGACAGGAGGCTTaGTCTCCCGCTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLGQEA*SPALWH
Trigger: ATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGTGGGTCGTGGACTaGCGTAGGATCTGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRWVVD*RRIWFN
Trigger: GTTAAACCAGATCCTACGGCAGTCCACGACCCACCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGGCAGCAAAGCCTTaGAGGGGTACCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRAAKP*RGTLEV
Trigger: TACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCCTGCTGGTTTCTCTaGATCACTAACCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPACWFL*ITNPLR
Trigger: CCTGAGTGGGTTAGTGATCCAGAGAAACCAGCAGGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCCCAGGGGATTCAATaGGGCGGTGTAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPQGIQ*GGVRAP
Trigger: TGGAGCCCTTACACCGCCCCATTGAATCCCCTGGGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCGCAGTGCACTGAACTaGGGAAAGTTCTGGACACCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRSALN*GKFWTP
Trigger: AGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTCCTCGGAGGATGTaGCATAGAATGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSPRRM*HRMASI
Trigger: GATGCTGGCCATTCTATGCCACATCCTCCGAGGAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCACTGCTGTAGAAGCTaGAGGTGGAGGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHCCRS*RWRGRT
Trigger: AGTCCTGCCCCTCCACCTCCAGCTTCTACAGCAGTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTGGGTCTTCGCTGTaGCACTGCTGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAGSSL*HCCRSW
Trigger: CCAGCTTCTACAGCAGTGCCACAGCGAAGACCCAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTCATGCCATTGTGCTaGGTCTTCGCTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFMPLC*VFAVAL
Trigger: CAGTGCCACAGCGAAGACCCAGCACAATGGCATGAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGTGTTGGCCATGTTaGGACTGGACAGGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLCWPC*DWTGLS
Trigger: GCTTAGACCTGTCCAGTCCCAACATGGCCAACACAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCCCCAGGCTCGCCTaGGTCCTGCTGGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFPRLA*VLLVAT
Trigger: AGTAGCAACCAGCAGGACCCAGGCGAGCCTGGGGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGTGTCAGAGAACTGTaGTCTGCATGGCGCACCATC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSVREL*SAWRTI
Trigger: GATGGTGCGCCATGCAGACCACAGTTCTCTGACACT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTGCGCCCGATGCCCTaGGTGAGACGAGTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLRPMP*VRRVVE
Trigger: TTCAACAACTCGTCTCACCCAGGGCATCGGGCGCAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGGCTGTGGGGATGCTaGACAGGGTTCCTGCTTGGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGLWGC*TGFLLG
Trigger: GCCAAGCAGGAACCCTGTCCAGCATCCCCACAGCCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCAAAGCTGGTGGGGTTaGGAGTGTTGGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPQSWWG*ECWLLL
Trigger: CAACAGCAACCAACACTCCCAACCCCACCAGCTTTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCCCACTTGGCCTTGTaGGACCCAATTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPHLAL*DPIPLA
Trigger: AGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCAGAGGATGCAGGTaGGGAGCTGTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLRGCR*GAVLRW
Trigger: CCACCTGAGGACAGCTCCCCACCTGCATCCTCTGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCAGAGGATGCAGGTaGGGAGCTGTCCTCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLRGCR*GAVLRW
Trigger: CCACCTGAGGACAGCTCCCCACCTGCATCCTCTGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCGCTGAGCTATTTGTaGAGGGGGCAGTCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSALSYL*RGQSGL
Trigger: CAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGAGCCAGGAAAGCTaGTTGGAGCTCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPESQES*LELFDS
Trigger: GGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGATGGATGTGGACGGTaGAGCCACCGCTTGCATGCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDGCGR*SHRLHA
Trigger: AGCATGCAAGCGGTGGCTCCACCGTCCACATCCATC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCTTGGGGATGGATGTaGACGGTGGAGCCACCGCTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFAWGWM*TVEPPL
Trigger: AAGCGGTGGCTCCACCGTCCACATCCATCCCCAAGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAGCAGCTTGGGGATaGATGTGGACGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGAAWG*MWTVEP
Trigger: TGGCTCCACCGTCCACATCCATCCCCAAGCTGCTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCAAATGCCACTGCTaGAGGACTGTGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCKCHC*RTVRSM
Trigger: CATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCAAATGCCACTGCTaGAGGACTGTGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCKCHC*RTVRSM
Trigger: CATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCATGAGCTGCCCCAGTaGAGAGGCCTCGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHELPQ*RGLEAV
Trigger: TACAGCCTCGAGGCCTCTCCACTGGGGCAGCTCATG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGGTGGCAGTGGTGGTaGAGGAAGCACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRWQWW*RKHRCQ
Trigger: CTGGCAGCGGTGCTTCCTCCACCACCACTGCCACCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGAGGTGGCAGTGGTaGTGGAGGAAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLRWQW*WRKHRC
Trigger: GCAGCGGTGCTTCCTCCACCACCACTGCCACCTCAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp TATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCACAGAGAGCTGTAGCTaGTTTTCAGTGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: YLEHWEMAGPHPWVIPPSTESCS*FSVRPE
Trigger: CTCTGGCCTCACTGAAAACCAGCTACAGCTCTCTGT...GGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGCTTGGTGGTCTGTaGCTGCTCCTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQLGGL*LLLRQA
Trigger: GGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGCCCTTCAGCTTGGTaGTCTGTGGCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCPSAW*SVAAPQ
Trigger: CTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTTTGCCCTTCAGCTTaGTGGTCTGTGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFCPSA*WSVAAP
Trigger: AGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCCCGCTCTGTGGCATaGACCAGAAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSRSVA*TRKKAS
Trigger: CGAGGCCTTCTTTCTGGTCCATGCCACAGAGCGGGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAGGCAGGCGATCTGTaGACCTGTCATCTCGATGGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPKAGDL*TCHLDG
Trigger: TCCATCGAGATGACAGGTCCACAGATCGCCTGCCTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAACAGGTATGCGCTaGGGAAGATGGGGCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGTGMR*GRWGSW
Trigger: CCAGCTGCCCCATCTTCCCCAGCGCATACCTGTTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTCAGGTCAGGCTGCTaGAGGACCTCAGCCACCGCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLRSGC*RTSATA
Trigger: GGCGGTGGCTGAGGTCCTCCAGCAGCCTGACCTGAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000342160.7
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCATGCAGTCTGGCCTaGACTGCCTGCAATCGCTTC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSACSLA*TACNRF
Trigger: GAAGCGATTGCAGGCAGTTCAGGCCAGACTGCATGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTTTTAAGGGTGGGCTaGTGTCTCATGAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVLRVG*CLMSSS
Trigger: CGATGAGCTCATGAGACATCAGCCCACCCTTAAAAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTTCTTCTGCGGCATaGTTAGACCTTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVASSAA*LDLGGG
Trigger: TCCTCCCCCAAGGTCTAATCATGCCGCAGAAGAAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTGGTGCTGGCAGCATaGTGGCTCCTTCTCTGGCGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVVLAA*WLLLWR
Trigger: CCGCCAGAGAAGGAGCCATCATGCTGCCAGCACCAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGAAGCGCAGTGCACTaGACTGGGGAAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGSAVH*TGESSG
Trigger: TCCAGAACTTTCCCCAGTTCAGTGCACTGCGCTTCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGCAACTTCCTCAGGTaGCTCTGCCCTTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSNFLR*LCPLIH
Trigger: ATGGATCAAAGGGCAGAGTCACCTGAGGAAGTTGCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCAGCTTCCCACACCTaGTTGACTACTTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPAASHT*LTTCFR
Trigger: TCTGAAGCAAGTAGTCAATCAGGTGTGGGAAGCTGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCCTGGAGGCAGGGCTaGACCACTTCCAAGAGTTTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAWRQG*TTSKSL
Trigger: CAAACTCTTGGAAGTGGTTCAGCCCTGCCTCCAGGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCAGCCGAGGTACCCTaGGGAGAGTCAGCATCACAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSAEVP*GESASQ
Trigger: CTGTGATGCTGACTCTCCTCAGGGTACCTCGGCTGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCACGAAGGATGTAGTTaGTCTCCCGAGAGCCGAGGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHEGCS*SPESRG
Trigger: GCCTCGGCTCTCGGGAGATCAACTACATCCTTCGTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGATGACAGGCAGAGGTaGGGGCTTCAAAGGGGTGGT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDDRQR*GLQRGG
Trigger: ACCACCCCTTTGAAGCCCTCACCTCTGCCTGTCATC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTCTGACGCGTAAGTaGCCGGTACTGCTGGTATAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVALTRK*PVLLVY
Trigger: GTATACCAGCAGTACCGGTCACTTACGCGTCAGAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGACTCCTCTGGAGTTaGAGCCTCTCCTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRLLWS*SLSLGG
Trigger: ACCTCCCAAGGAGAGGCTTCAACTCCAGAGGAGTCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGACAGGTCTAAGCTGTaGGGTACTCTGGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDRSKL*GTLARS
Trigger: TGACCTGGCCAGAGTACCTCACAGCTTAGACCTGTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGCCTCCCCATCCATaGTATCCCCATCTGCCACCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQPPHP*YPHLPP
Trigger: AGGTGGCAGATGGGGATATCATGGATGGGGAGGCTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCATCTCTTGTGAACTaGGCACCTCAGGCTGCCCAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFASLVN*APQAAQ
Trigger: CTGGGCAGCCTGAGGTGCTCAGTTCACAAGAGATGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCAGCACGTCCTCTTGTaGTTCATCCTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPQHVLL*FILSTS
Trigger: AGAAGTGGAGAGGATGAATCACAAGAGGACGTGCTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTGCTGTCCTCTTCCTaGGTGTGCTCCTCCTCATCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLLSSS*VCSSSS
Trigger: GGATGAGGAGGAGCACACTCAGGAAGAGGACAGCAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGATGTCAGCAGCAGCTaGGGGACCAAGCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDVSSS*GTKQPL
Trigger: CAGAGGTTGCTTGGTCCCTCAGCTGCTGCTGACATC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCATAGGCGTCCCATCTaGGAGATTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHRRPI*EILFSG
Trigger: TCCACTGAACAGAATCTCTCAGATGGGACGCCTATG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGTTGGTTGCTGTTGTaGGGATTGCAGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCWLLL*GLQSAK
Trigger: CTTGGCACTCTGCAATCCTCACAACAGCAACCAACA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAGAGCCTTCTAGCTaGCTGCTGACAGCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGEPSS*LLTAVS
Trigger: ACTGACGGCTGTCAGCAGTCAGCTAGAAGGCTCTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGAACTGCCAGCTGCTaGAGTGTCACCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRTASC*SVTHSL
Trigger: GAGGCTGTGGGTGACACTTCAGCAGCTGGCAGTTCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACTACGGCGCAGGTCTaGGGGCAGAGTCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTTAQV*GQSLDE
Trigger: TTCATCCAGACTCTGCCCTCAGACCTGCGCCGTAGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGAGCAGACTGCGGATaGCCCAGTGGCGGGTCTGGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARADCG*PSGGSG
Trigger: CCCAGACCCGCCACTGGGTCATCCGCAGTCTGCTCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGCGCTCACTGGCACTaGCTTCACGGAGTTCTTGCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSAHWH*LHGVLA
Trigger: GGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGACAACATGTTCATaGGCTGCCCCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVTTCS*AAPVER
Trigger: CCTCTCCACTGGGGCAGCTCATGAACATGTTGTCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAGAGCTCCGGCGGATaGCTGGGTGTGACAACATGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFESSGG*LGVTTC
Trigger: ACATGTTGTCACACCCAGTCATCCGCCGGAGCTCTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCLRAL*PSRTIC
Trigger: ACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCGGACAGACGCCTCTaGCTGGCTAGACTCCGACGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPDRRL*LARLRR
Trigger: ACGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACTCAGCTGCTCGCTaGGCAGGGGTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNSAAR*AGVTQV
Trigger: CACCTGAGTTACCCCTGCTCAGCGAGCAGCTGAGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTTAACACAGTGCGGTaGGTCTCTGCAAAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFNTVR*VSAKRR
Trigger: CCTTCGCTTTGCAGAGACTCACCGCACTGTGTTAAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGGCCCCATTGGGTTTaGGGTCACGAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPWPHWV*GHELHK
Trigger: TTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTGGCACGGTCAGCTTaGTCGAAAGAACGCAATGCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLARSA*SKERNA
Trigger: AGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCTTGGAAGTACCTGTaGCAAACTGGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPWKYL*QTGGTW
Trigger: CCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAAACATGTGTGAGCTaGAGGCAGGCGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPKTCVS*RQAICG
Trigger: TCCACAGATCGCCTGCCTTCAGCTCACACATGTTTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCGGCGGGGAGAGAATaGGAAGAGGAACAGGTATGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAAGRE*EEEQVC
Trigger: GCATACCTGTTCCTCTTCTCATTCTCTCCCCGCCGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAAGGGACTACAAGGTaGTCTGTGAACAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQGTTR*SVNRLA
Trigger: TGCCAGTCTGTTCACAGATCACCTTGTAGTCCCTTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGTCTATTAAGGCTCTaGAGTCTGCAGGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCLLRL*SLQEPQ
Trigger: CTGAGGCTCCTGCAGACTGCAGAGCCTTAATAGACA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGTCTGTCCAGCATCTaGCAGTATTCCATCGAAGCG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCLSSI*QYSIEA
Trigger: CGCTTCGATGGAATACTGGCAGATGCTGGACAGACA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGGAGCAGTGGCAGTaGCATCTGCCTTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVEEQWQ*HLPSGL
Trigger: CAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGGGCAGCAGTGAGTaGATGCAGCAGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMGSSE*MQQRCG
Trigger: GCCACACCTCTGCTGCATGCACTCACTGCTGCCCAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGAGAGGAGGACAGTaGTTTCCCACACCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVERGGQ*FPTPGN
Trigger: GTTCCCTGGTGTGGGAAAGCACTGTCCTCCTCTCTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAACAGTGCCTCCATTaGATGTTCCCTTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQQCLH*MFPCEA
Trigger: GGCTTCACAAGGGAACATGCAATGGAGGCACTGTTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGTACTCTGTGGCCTaGTCCATGGTGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRYSVA*SMVLVF
Trigger: GAACACCAGCACCATGGAGCAGGCCACAGAGTACCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTCTGGACTTCCTTCTaGTCCTTGGCTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVWTSF*SLAAWR
Trigger: CCTCCAGGCAGCCAAGGAGCAGAAGGAAGTCCAGAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGGGACTCCCAGCATaGTCACGCAGGCCCGGATTA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQGLPA*SRRPGL
Trigger: TAATCCGGGCCTGCGTGAGCATGCTGGGAGTCCCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGACGAAGGGTGGCATaGAAAGTATCTGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRRRVA*KVSGST
Trigger: TGTGGACCCAGATACTTTGCATGCCACCCTTCGTCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCCGAGAGCCGAGGCTaGCAGACACAACACCAGAGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPESRG*QTQHQR
Trigger: CCTCTGGTGTTGTGTCTGGCAGCCTCGGCTCTCGGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTCTGGAGCATGGTATaGAGCCAGAGCATTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLWSMV*SQSIQH
Trigger: ATGCTGAATGCTCTGGCTGCATACCATGCTCCAGAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGGGAGGTCCCAGATaGGGAAGTCTCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLGGPR*GSLSGG
Trigger: GCCTCCACTGAGACTTCCGCATCTGGGACCTCCCAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGACCTCACCAACTCTaGCAGAAGACGAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGPHQL*QKTKDS
Trigger: ACTATCCTTCGTCTTCTGGCAGAGTTGGTGAGGTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCAGCCATAGCCAGTaGCCGTCCAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLSHSQ*PSKGCF
Trigger: AAAGCAGCCCTTGGACGGGCACTGGCTATGGCTGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCTTCGCTGTGGCACTaGTGTAGAAGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSLWH*CRSWRW
Trigger: CCACCTCCAGCTTCTACAGCAGTGCCACAGCGAAGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCTCGCCTGGGTCCTaGTGGTTGCTACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGSPGS*WLLLES
Trigger: AGATTCCAGTAGCAACCAGCAGGACCCAGGCGAGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGCTCGCCTGGGTCCTaGTGGTTGCTACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGSPGS*WLLLES
Trigger: AGATTCCAGTAGCAACCAGCAGGACCCAGGCGAGCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCATGATATCCCCATCTaGCACCTCTGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHDIPI*HLCLSD
Trigger: GTCACTCAGACAGAGGTGGCAGATGGGGATATCATG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTTGTAGGGGAAGGCTaGTGCTCAGCTGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFVGEG*CSAEGC
Trigger: ACATCCTTCAGCTGAGCAGCAGCCTTCCCCTACAAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCTGGACAGGGTTCCTaGTTGGCTGGTAGCTGTGCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAGQGS*LAGSCA
Trigger: AGCACAGCTACCAGCCAAGCAGGAACCCTGTCCAGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCAGCATCGAGAACTTTaGATTCTTCTGTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPQHREL*ILLSSG
Trigger: CCCGCTGGACAGAAGAATGCAAAGTTCTCGATGCTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGGCTGCTCAGAACTaGCAGCTGCTGAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWAAQN*QLLKCH
Trigger: GTGACACTTCAGCAGCTGGCAGTTCTGAGCAGCCCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGGAGTGGAGCTGCCTaGTCTGGGCTGCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRSGAA*SGLLRT
Trigger: AGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTGACCCATCACTCCTaGCTTGCACTTCCGCCACAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLTHHS*LALPPQ
Trigger: CTGTGGCGGAAGTGCAAGGCAGGAGTGATGGGTCAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGGTTGGTGGACGAATaGCTAGCTGGTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGLVDE*LAGSVE
Trigger: TTCTACAGAACCAGCTAGGCATTCGTCCACCAACCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGGTTGGTGGACGAATaGCTAGCTGGTTCTGTAGAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGLVDE*LAGSVE
Trigger: TTCTACAGAACCAGCTAGGCATTCGTCCACCAACCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTCAGCTCTCTGCTGTaGCAGTACTTCCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLSSLL*QYFLLN
Trigger: ATTCAGGAGGAAGTACTGGCACAGCAGAGAGCTGAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGTTCTCGTCGCTGCTaGTCAGCTCTCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSRRC*SALCCA
Trigger: GGCACAGCAGAGAGCTGAGCAGCAGCGACGAGAACT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGCTTGAGCCTCAGCTaGAATGTCAGGTGGCATCAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGLSLS*NVRWHH
Trigger: GTGATGCCACCTGACATTGCAGCTGAGGCTCAAGCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCATGAGCTGTCGCTaGCGGGCTTCTTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCMSCR*RASCSR
Trigger: ACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGAATAGCAGAGAGTaGGGAGGTGCTACTGTGCCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVENSRE*GGATVP
Trigger: GGGCACAGTAGCACCTCCGCACTCTCTGCTATTCTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTCTCACTGCTGCGCTaGAAGATGGAGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLSLLR*KMESRL
Trigger: CAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTGACAGGGGTGGGTaGAGTAGGGGGTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSDRGG*SRGCGR
Trigger: ACGCCCACACCCCCTACTGCACCCACCCCTGTCACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLVVCG*SSGRPS
Trigger: TGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACCTGCTCTGCATTTTaGCCTTCAGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTCSAF*PSAWWS
Trigger: AGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCGTCCAAACTCAGCTaGTCGCTGAGCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSKLS*SLSRGN
Trigger: GTTACCCCTGCTCAGCGAGCAGCTGAGTTTGGACGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCGTCCTTGATGTGTaGCAGCTGGCTCTCACGGGT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLVLDV*QLALTG
Trigger: ACCCGTGAGAGCCAGCTGGCACACATCAAGGACGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGCTTGAGGAGATGTaGATAGATGAGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRLEEM*IDEGSR
Trigger: CCGGGAGCCCTCATCTATGCACATCTCCTCAAGCCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGTGCGGTGAGTCTCTaGAAAGCGAAGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSAVSL*KAKELL
Trigger: CAGAAGTTCCTTCGCTTTGCAGAGACTCACCGCACT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGTCACGACGGACATaGACAGCCATGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWSRRT*TAMSSF
Trigger: GAAAGAAGACATGGCTGTGCATGTCCGTCGTGACCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGACAGACAGGTCCCTaGAAAGGCTACTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGQTGP*KGYCLF
Trigger: AAAAAGGCAGTAGCCTTTGCAGGGACCTGTCTGTCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCTCCTCCGCATGGCTaGGAGGTAATCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPPPHG*EVIWRQ
Trigger: CTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGCACTCCCCAGGTTaGATGCAGTATCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQHSPG*MQYPQG
Trigger: CCCTTGGGGATACTGCATCCAACCTGGGGAGTGCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGCAGAGGTGTGGCCTaGGCTGAGAGGGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSRGVA*AERVAS
Trigger: TGATGCTACCCTCTCAGCCCAGGCCACACCTCTGCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGCAGGCAGCGAATGTaGAGATTCAAGCACCGTGGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGRQRM*RFKHRG
Trigger: ACCACGGTGCTTGAATCTCCACATTCGCTGCCTGCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGATGTGGCATAGAATaGCCAGCATCGATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGCGIE*PASIQP
Trigger: TGGCTGAATCGATGCTGGCCATTCTATGCCACATCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGCCTGGGGCAGTGTaGCCATCTGACTTATCCACT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRPGAV*PSDLST
Trigger: AGTGGATAAGTCAGATGGCCACACTGCCCCAGGCCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATCCACTTTGGGGTCTaGACTTCCTTCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPIHFGV*TSFCSL
Trigger: CAAGGAGCAGAAGGAAGTCCAGACCCCAAAGTGGAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGTGTGATCCACTTTaGGGTCTGGACTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWCDPL*GLDFLL
Trigger: CAGAAGGAAGTCCAGACCCCAAAGTGGATCACACCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGCATGCAAAGTATCTaGGTCCACAGGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGMQSI*VHRDSQ
Trigger: CTGGGAGTCCCTGTGGACCCAGATACTTTGCATGCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATCATGGCATATTTGTaGTCCCGGGTGAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPIMAYL*SRVSLR
Trigger: TCTGAGGCTCACCCGGGACCACAAATATGCCATGAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATTGCGGCATGCGGCTaGCCCAAGGACACGAAGGAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFIAACG*PKDTKD
Trigger: ATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTTGAAGCCTCTCCTTaGGAGGTCCCAGATGCGGAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVEASP*EVPDAE
Trigger: TTCCGCATCTGGGACCTCCCAAGGAGAGGCTTCAAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTATGTGGGAGCAGGTaGTCCAGAACAAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVCGSR*SRTKAS
Trigger: GCTAGCTTTTGTTCTGGACCACCTGCTCCCACATAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTATGTGGGAGCAGGTaGTCCAGAACAAAAGCTAGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVCGSR*SRTKAS
Trigger: GCTAGCTTTTGTTCTGGACCACCTGCTCCCACATAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTGTCTTCTGCATTCTaGGTATGTGGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLSSAF*VCGSRW
Trigger: CCACCTGCTCCCACATACCCAGAATGCAGAAGACAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTCACTAGGGCCACCTaGGCATCTGTGCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFTRAT*ASVPLP
Trigger: AGGGAGTGGCACAGATGCCCAGGTGGCCCTAGTGAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCACTGCTGTAGAAGCTaGAGGTGGAGGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHCCRS*RWRGRT
Trigger: AGTCCTGCCCCTCCACCTCCAGCTTCTACAGCAGTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCTGGGTCTTCGCTGTaGCACTGCTGTAGAAGCTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAGSSL*HCCRSW
Trigger: CCAGCTTCTACAGCAGTGCCACAGCGAAGACCCAGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTCCCCAGGCTCGCCTaGGTCCTGCTGGTTGCTACT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFPRLA*VLLVAT
Trigger: AGTAGCAACCAGCAGGACCCAGGCGAGCCTGGGGAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGAATCTTCTCGGTTaGCCTGCAAGGTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWNLLG*PARWKL
Trigger: AAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATATTTCCTGGGGATaGGGGGATGTCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPDISWG*GDVCST
Trigger: AGTGCTACAGACATCCCCCCATCCCCAGGAAATATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGTGTGGCCAGTATTaGCCGTCAGCTGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWCGQY*PSAALG
Trigger: CCCTAAGGCAGCTGACGGCCAATACTGGCCACACCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGTAGTGAACATGAATaGTGTGGCCAGTATTGGCCG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGSEHE*CGQYWP
Trigger: CGGCCAATACTGGCCACACCATTCATGTTCACTACC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTCTCCCAAAGCTGGTaGGGTTGGGAGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLSQSW*GWECWL
Trigger: CAACCAACACTCCCAACCCCACCAGCTTTGGGAGAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCCCACTTGGCCTTGTaGGACCCAATTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPHLAL*DPIPLA
Trigger: AGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTGTCCTCAGGTGGCTaGGCAGATTCCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLSSGG*ADSPDP
Trigger: TGGGTCAGGGGAATCTGCCCAGCCACCTGAGGACAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTCCTCCTGAATGGCTaGAGGCAGGGCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFLLNG*RQGSQK
Trigger: TTTCTGGCTGCCCTGCCTCCAGCCATTCAGGAGGAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCAAGGCGAGTATACTaGACCCCACGGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVARRVY*TPRLPL
Trigger: AAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTAGGGCTGCATCCATaGATACTGAGAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLGLHP*ILRARK
Trigger: TTTCCTGGCTCTCAGTATCCATGGATGCAGCCCTAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGAGCAGCTTGGGGATaGATGTGGACGGTGGAGCCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGAAWG*MWTVEP
Trigger: TGGCTCCACCGTCCACATCCATCCCCAAGCTGCTCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGTGGCAGTGGTGGTaGAGGAAGCACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRWQWW*RKHRCQ
Trigger: CTGGCAGCGGTGCTTCCTCCACCACCACTGCCACCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACAGAGAGCTGTAGCTaGTTTTCAGTGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTESCS*FSVRPE
Trigger: CTCTGGCCTCACTGAAAACCAGCTACAGCTCTCTGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACATTTCCTCAGAACAAGAGTaGGATGTCAACACCTCTACA +
Preference number: 4 (lower is better)
Translates to: MGDSSLRTDASDWLDSDISSEQE*DVNTST
Trigger: TGTAGAGGTGTTGACATCCCACTCTTGTTCTGAGGA...AATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCTGCAGTAGTACGTTaGCTGCATCCTCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITAAVVR*LHPLSL
Trigger: AAGGCTTAGAGGATGCAGCCAACGTACTACTGCAGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACATTTGTATAATGGCATCATTTTGCCCTTCAGCTTaGTGGTCTGTGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: LRTDASDWLDSDICIMASFCPSA*WSVAAP
Trigger: AGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAA...TGATGCCATTATACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGACATAGAAGGCAGCTaGAGCTCCCGGCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDIEGS*SSRPPK
Trigger: TTTGGGTGGCCGGGAGCTCCAGCTGCCTTCTATGTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGCCGAACAGCTGCCTaGATGCTGCTAGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCRTAA*MLLAEP
Trigger: AGGCTCAGCTAGCAGCATCCAGGCAGCTGTTCGGCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCTGGTCCACATCCATaGGTGATTCCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAGPHP*VIPPSG
Trigger: TCCGGAGGGAGGAATCACCCATGGATGTGGACCAGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACTAGCACCGCATGCTaGTCATGGGATTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTSTAC*SWDSSS
Trigger: ACTAGAGGAATCCCATGACCAGCATGCGGTGCTAGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCCCGCTCTGTGGCATaGACCAGAAAGAAGGCCTCG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSRSVA*TRKKAS
Trigger: CGAGGCCTTCTTTCTGGTCCATGCCACAGAGCGGGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGCTCTCCCGCTCTGTaGCATGGACCAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCSPAL*HGPERR
Trigger: CCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGCAAGGTGGGTCGTaGACTGCCGTAGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQQGGS*TAVGSG
Trigger: ACCAGATCCTACGGCAGTCCACGACCCACCTTGCTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGCCCATCAGCAAGGTaGGTCGTGGACTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGPSAR*VVDCRR
Trigger: CCTACGGCAGTCCACGACCCACCTTGCTGATGGGCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGTTGGGGTTGCAGTaGGAAGATGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWLGLQ*EDGLMV
Trigger: CACCATCAATCCATCTTCCCACTGCAACCCCAACCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCAACTGCTTGCGGATaGCTCCTGTCATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPPTACG*LLSFSS
Trigger: AGATGAGAATGACAGGAGCCATCCGCAAGCAGTTGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCAACTGCTTGCGGATaGCTCCTGTCATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPTACG*LLSFSS
Trigger: AGATGAGAATGACAGGAGCCATCCGCAAGCAGTTGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAAACTGGAGGAACTTaGCACGGTCAGCTTGATCGA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQTGGT*HGQLDR
Trigger: TCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTACCTGTGACAAACTaGAGGAACTTGGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVPVTN*RNLARS
Trigger: TGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTACCTGTGACAAACTaGAGGAACTTGGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVPVTN*RNLARS
Trigger: TGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCTTCAGAGCACTCCTaGATAGCCAACAGTAGCATG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPSEHS*IANSSM
Trigger: CATGCTACTGTTGGCTATCCAGGAGTGCTCTGAAGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAAGATGGGGCAGCTaGGACACACACGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGRWGS*DTHGEL
Trigger: CAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGTTGCACCAGTGGTaGAGGCAGGTGGGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKLHQW*RQVGKR
Trigger: CCGCTTGCCCACCTGCCTCCACCACTGGTGCAACTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACAGACGCCTCTGACTaGCTAGACTCCGACATTTGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTDASD*LDSDIC
Trigger: ACAAATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426907.5
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTTCCCGAACCTTCCTaGCCAAGTTGGCCTGCTGGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLPEPS*PSWPAG
Trigger: ACCAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAACAGGTCCACCCAGTaGTATAACTCGCACTTTCCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPNRSTQ*YNSHFP
Trigger: TGGAAAGTGCGAGTTATATCACTGGGTGGACCTGTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCATGCAGTCTGGCCTaGACTGCCTGCAATCGCTTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKACSLA*TACNRF
Trigger: GAAGCGATTGCAGGCAGTTCAGGCCAGACTGCATGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGTCCACTATGGGATTaGAAAGCTGCCATATCCAGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSPLWD*KAAISR
Trigger: CCTGGATATGGCAGCTTTTCAATCCCATAGTGGACT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGCAACAGTCCTTTCTaGTTCACAAATTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGNSPF*FTNSWQ
Trigger: CTGCCAGGAATTTGTGAATCAGAAAGGACTGTTGCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTCTCGCAACAACACTaGGCCCCCAGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFSQQH*APRGFN
Trigger: ATTGAATCCCCTGGGGGCTCAGTGTTGTTGCGAGAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAACAACTCCTCCCATaGTTGGAGGAGGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVEQLLP*LEEGGL
Trigger: TAACCCACCCTCCTCCAATCATGGGAGGAGTTGTTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCAGTGTGGCCATCTaGCTTATCCACTCTGACACG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGSVAI*LIHSDT
Trigger: CGTGTCAGAGTGGATAAGTCAGATGGCCACACTGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTCTTCGGCCTGCAGTaGATCGCACGCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFFGLQ*IARLSL
Trigger: GAGAGACAAGCGTGCGATTCACTGCAGGCCGAAGAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATTTGTGGTCCCGGGTaGGCCTCAGACAGAGACGAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFICGPG*ASDRDE
Trigger: TTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGACTCCTCTGGAGTTaGAGCCTCTCCTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRLLWS*SLSLGG
Trigger: ACCTCCCAAGGAGAGGCTTCAACTCCAGAGGAGTCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGACAGGTCTAAGCTGTaGGGTACTCTGGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDRSKL*GTLARS
Trigger: TGACCTGGCCAGAGTACCTCACAGCTTAGACCTGTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTTCAGAGCAGCATTaGCTGTGTTGGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVASEQH*LCWPCW
Trigger: CCAACATGGCCAACACAGTCAATGCTGCTCTGAAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCCCGATGCCCTGGGTaGGACGAGTTGTTGAAGAGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVARCPG*DELLKS
Trigger: GCTCTTCAACAACTCGTCTCACCCAGGGCATCGGGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCATCAGAACGGGCGATaGTGTGGACGTCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHQNGR*CGRHRC
Trigger: GCAACGATGACGTCCACATCATCGCCCGTTCTGATG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGGTAGCTGTGCTCTaGTCATGGAAAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLVAVL*SWKKSS
Trigger: GGATGACTTTTTCCATGATCAGAGCACAGCTACCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGTAGCTGCATCAGTTaGAGATGGGGTTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCSCIS*RWGCWV
Trigger: TACCCAACAACCCCATCTTCAACTGATGCAGCTACA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTCGTCTCAGGGCTTaGGCCTCAGCTGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSRLRA*ASAAMS
Trigger: TGACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACAGACGCTCATGCATaGGCTGTCGCTGCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTDAHA*AVAAGL
Trigger: AAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGTCCGCTGCTGTGTaGAGTGGCTGGGAAATACCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWSAAV*SGWEIP
Trigger: AGGTATTTCCCAGCCACTTCACACAGCAGCGGACCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTTGCCTTTCCGGCTaGCATTCATGTTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSCLSG*HSCCPV
Trigger: AACTGGACAACATGAATGTCAGCCGGAAAGGCAAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCTTGCCTTTCCGGCTaGCATTCATGTTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSCLSG*HSCCPV
Trigger: AACTGGACAACATGAATGTCAGCCGGAAAGGCAAGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTGACAACATGTTCATaGGCTGCCCCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVTTCS*AAPVER
Trigger: CCTCTCCACTGGGGCAGCTCATGAACATGTTGTCAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCGGATGACTGGGTGTaGCAACATGTTCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVADDWV*QHVHEL
Trigger: CAGCTCATGAACATGTTGTCACACCCAGTCATCCGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAGAGCTCCGGCGGATaGCTGGGTGTGACAACATGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKESSGG*LGVTTC
Trigger: ACATGTTGTCACACCCAGTCATCCGCCGGAGCTCTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCATTCAGTAGCAGCTTaGGAACAGTGTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHSVAA*EQCPGS
Trigger: GGACCCGGGACACTGTTCTCAAGCTGCTACTGAATG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCLRAL*PSRTIC
Trigger: ACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAACTCAGCTGCTCGCTaGGCAGGGGTAACTCAGGTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKNSAAR*AGVTQV
Trigger: CACCTGAGTTACCCCTGCTCAGCGAGCAGCTGAGTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGAGATGTGCATAGATaGGGGCTCCCGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGDVHR*GLPGEE
Trigger: TTCTTCTCCCGGGAGCCCTCATCTATGCACATCTCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAGATGTGCATAGATaGGGGCTCCCGGGAGAAGAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGDVHR*GLPGEE
Trigger: TTCTTCTCCCGGGAGCCCTCATCTATGCACATCTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACATCTCTCGAGAGATaGTCATATACCACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTSLER*SYTTPA
Trigger: TGCGGGAGTGGTATATGATCATCTCTCGAGAGATGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGACTCGATCACCAGGTaGGGTACGGAACAAGGCATA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDSITR*GTEQGI
Trigger: TATGCCTTGTTCCGTACCTCACCTGGTGATCGAGTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTACAAGGTGATCTGTaGACAGACTGGCAGACAGAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLQGDL*TDWQTD
Trigger: ATCTGTCTGCCAGTCTGTTCACAGATCACCTTGTAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGAAATTCCCCACACTaGTCCAACAGCTTCCCGAAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGNSPH*SNSFPN
Trigger: GTTCGGGAAGCTGTTGGAGCAGTGTGGGGAATTTCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACTGCCAGCACCACTTaGATATCAGAGGAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTASTT*ISEEAN
Trigger: ATTGGCTTCCTCTGATATGCAAGTGGTGCTGGCAGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGTCTGGCCTGAACTaGCTGCAATCGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQSGLN*LQSLPV
Trigger: CACAGGAAGCGATTGCAGGCAGTTCAGGCCAGACTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCATCACATGTCGTATaGCATCTGAGAAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPPSHVV*HLRKQG
Trigger: ACCCTGCTTTCTCAGATGGCATACGACATGTGATGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATGATGGCAGTCGTTaGATCTGTTTTAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPDDGSR*ICFKGG
Trigger: CCCACCCTTAAAACAGATGCAACGACTGCCATCATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATGGGCAGCAGTGAGTaGATGCAGCAGAGGTGTGGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKMGSSE*MQQRCG
Trigger: GCCACACCTCTGCTGCATGCACTCACTGCTGCCCAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTAGGAATTCTCCTGTaGCATCAGGCAAGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLGILL*HQASLS
Trigger: ACTCAGACTTGCCTGATGGCACAGGAGAATTCCTAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGCCTGCTCCATGGTaGTGGTGTTCAACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWPAPW*WCSTVP
Trigger: AGGCACTGTTGAACACCAGCACCATGGAGCAGGCCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGGTACTCTGTGGCCTaGTCCATGGTGCTGGTGTTC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRYSVA*SMVLVF
Trigger: GAACACCAGCACCATGGAGCAGGCCACAGAGTACCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTAAGTGACCGGTACTaGTGGTATACATCATCACCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVSDRY*WYTSSP
Trigger: GGGTGATGATGTATACCAGCAGTACCGGTCACTTAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTGGGAGGTCCCAGATaGGGAAGTCTCAGTGGAGGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLGGPR*GSLSGG
Trigger: GCCTCCACTGAGACTTCCGCATCTGGGACCTCCCAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGCTCGCCTGGGTCCTaGTGGTTGCTACTGGAATCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGSPGS*WLLLES
Trigger: AGATTCCAGTAGCAACCAGCAGGACCCAGGCGAGCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCTCATCCTCGTTACTaGCACTGCTGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPHPRY*HCCPLP
Trigger: AGGAAGAGGACAGCAGTGGCAGTAACGAGGATGAGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTAGGGGAAGGCTGCTaGTCAGCTGAAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVGEGC*SAEGCQ
Trigger: CTGACATCCTTCAGCTGAGCAGCAGCCTTCCCCTAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTAGGGGAAGGCTGCTaGTCAGCTGAAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVGEGC*SAEGCQ
Trigger: CTGACATCCTTCAGCTGAGCAGCAGCCTTCCCCTAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGATGCAGTACACTGTaGACTCTGATCCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRCSTL*TLIPVL
Trigger: GAGAACAGGGATCAGAGTGCACAGTGTACTGCATCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGATGCAGTACACTGTaGACTCTGATCCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRCSTL*TLIPVL
Trigger: GAGAACAGGGATCAGAGTGCACAGTGTACTGCATCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGAGGATTGCAGAGTaGCAAGGGTCTCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVRIAE*QGSPWT
Trigger: AGTCCAAGGAGACCCTTGGCACTCTGCAATCCTCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTTGGGAGTGTTGGTTaGTGTTGTGAGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVGSVG*CCEDCR
Trigger: TCTGCAATCCTCACAACAGCAACCAACACTCCCAAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCATCTGAGTTGTTTCTaGTTCCCCACTTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHLSCF*FPTWPC
Trigger: ACAAGGCCAAGTGGGGAAGCAGAAACAACTCAGATG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGGCTGCTCAGAACTaGCAGCTGCTGAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWAAQN*QLLKCH
Trigger: GTGACACTTCAGCAGCTGGCAGTTCTGAGCAGCCCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTGCCTGCTCTGGGCTaGTCAGAACTGCCAGCTGCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLPALG*SELPAA
Trigger: AGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCTGCTCAGCTCTCTaGTGTGCCAGTACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCCSAL*CASTSS
Trigger: GGAGGAAGTACTGGCACAGCAGAGAGCTGAGCAGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCAAACAGACGCTCATaGATGAGCTGTCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPNRRS*MSCRCR
Trigger: CCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAGGTGCCACCTCTCTaGACAGCAAGGCGAGTATAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKVPPL*TARRVY
Trigger: GTATACTCGCCTTGCTGTGCAGAGAGGTGGCACCTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGTGGAGCCACCGCTTaGATGCTTCTCGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGGATA*MLLGMF
Trigger: AAACATACCGAGAAGCATGCAAGCGGTGGCTCCACC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTTTCTTTGGTCCGCTaGTGTGTGAAGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVSLVR*CVKWLG
Trigger: TCCCAGCCACTTCACACAGCAGCGGACCAAAGAAAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGCTACAGGCCTTATTaGCCCTTTCCCGATCACTCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGYRPY*PFPDHS
Trigger: AGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGTGACAGGGGTGGGTaGAGTAGGGGGTGTGGGCGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASDRGG*SRGCGR
Trigger: ACGCCCACACCCCCTACTGCACCCACCCCTGTCACT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGTCTGTACTGCTGCTaGCCCCATCACTCACCTTCG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSLYCC*PHHSPS
Trigger: CGAAGGTGAGTGATGGGGGCAGCAGCAGTACAGACT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGTCTGTACTGCTGCTaGCCCCATCACTCACCTTCG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSLYCC*PHHSPS
Trigger: CGAAGGTGAGTGATGGGGGCAGCAGCAGTACAGACT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLVVCG*SSGRPS
Trigger: TGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCGGAGGAACCTAGCCTaGCTGTCTGCTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRRNLA*LSAWLS
Trigger: AGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAASASS*RTAAWM
Trigger: CATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCTAGACTCCGACGTTaGTGCTTGTTGCTGTCTCCG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFARLRR*CLLLSP
Trigger: CGGAGACAGCAACAAGCAGCAACGTCGGAGTCTAGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCGTCCAAACTCAGCTaGTCGCTGAGCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSSKLS*SLSRGN
Trigger: GTTACCCCTGCTCAGCGAGCAGCTGAGTTTGGACGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCACTAGCACCGCATaGTGGTCATGGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSTSTA*WSWDSS
Trigger: AGAGGAATCCCATGACCAGCATGCGGTGCTAGTGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCTGGTTTAACACAGTaGGGTGAGTCTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSGLTQ*GESLQS
Trigger: GCTTTGCAGAGACTCACCGCACTGTGTTAAACCAGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGTGGGTCGTGGACTaGCGTAGGATCTGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRWVVD*RRIWFN
Trigger: GTTAAACCAGATCCTACGGCAGTCCACGACCCACCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTGAAGGAGGAAGTTaGACCAGTGGTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSEGGS*TSGGGR
Trigger: CCTGCCTCCACCACTGGTGCAACTTCCTCCTTCAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGAAGGAGGAAGTTaGACCAGTGGTGGAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSEGGS*TSGGGR
Trigger: CCTGCCTCCACCACTGGTGCAACTTCCTCCTTCAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCATACTCATCCTGGTaGGAAATTCCCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSYSSW*EIPHTA
Trigger: AGCAGTGTGGGGAATTTCCCACCAGGATGAGTATGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATATTGCATGCAGTCTaGCCTGAACTGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPILHAV*PELPAI
Trigger: GATTGCAGGCAGTTCAGGCCAGACTGCATGCAATAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGGGTATGGATCCATaGAAGGATCAATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITEGMDP*KDQSWP
Trigger: AGGCCATGATTGATCCTTCCATGGATCCATACCCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGGGTATGGATCCATaGAAGGATCAATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPEGMDP*KDQSWP
Trigger: AGGCCATGATTGATCCTTCCATGGATCCATACCCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGAAAGCAGGGTCTTaGATGGCCTTCTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITEKAGS*MAFLRK
Trigger: TTTCCTCAAGAAGGCCATCCAAGACCCTGCTTTCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTCAATCCATTGTCCTaGAGTGAGGAGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVNPLS*SEESSD
Trigger: ATCACTGCTCTCCTCACTCCAGGACAATGGATTGAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTCCTCCGCATGGCTaGGAGGTAATCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPPPHG*EVIWRQ
Trigger: CTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTCTCCTCCTCCGCATaGCTGGGAGGTAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFSSSA*LGGNLE
Trigger: CTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGCACTCCCCAGGTTaGATGCAGTATCCCCAAGGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQHSPG*MQYPQG
Trigger: CCCTTGGGGATACTGCATCCAACCTGGGGAGTGCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCAGGGAGGAGAGGATaGAGTCCAACTGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPGRRG*SPTEGD
Trigger: GTCTCCTTCAGTTGGACTCCATCCTCTCCTCCCTGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCCCAGGGGATTCAATaGGGCGGTGTAAGGGCTCCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPQGIQ*GGVRAP
Trigger: TGGAGCCCTTACACCGCCCCATTGAATCCCCTGGGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGCAGAGGTGTGGCCTaGGCTGAGAGGGTAGCATCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSRGVA*AERVAS
Trigger: TGATGCTACCCTCTCAGCCCAGGCCACACCTCTGCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGATCTTTTTCCGCCCTaGGTCGTACCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDLFPP*VVPAFS
Trigger: TGAGAAGGCAGGTACGACCCAGGGCGGAAAAAGATC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATTCAAGCACCGTGGTaGGATTCACCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPIQAPW*DSPSSP
Trigger: TGGAGAAGATGGTGAATCCCACCACGGTGCTTGAAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGATTCAAGCACCGTaGTGGGATTCACCATCTTCT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITEIQAP*WDSPSS
Trigger: AGAAGATGGTGAATCCCACCACGGTGCTTGAATCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCAGGCAGCGAATGTaGAGATTCAAGCACCGTGGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGRQRM*RFKHRG
Trigger: ACCACGGTGCTTGAATCTCCACATTCGCTGCCTGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCACCTCCAGGCAATTTaGCAGGCAGCGAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHLQAI*QAANVE
Trigger: CTCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCACCTCCAGGCAATTTaGCAGGCAGCGAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHLQAI*QAANVE
Trigger: CTCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAACTGGGGAAAGTTCTaGACACCTCCAGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPNWGKF*TPPGNL
Trigger: CAAATTGCCTGGAGGTGTCCAGAACTTTCCCCAGTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCGCAGTGCACTGAACTaGGGAAAGTTCTGGACACCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRSALN*GKFWTP
Trigger: AGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTGTGGCCTGCTCCATaGTGCTGGTGTTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLWPAP*CWCSTV
Trigger: CACTGTTGAACACCAGCACCATGGAGCAGGCCACAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGCTCATCAAGAAGGTaGAAGCAGCCTGGCAACATA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSSSRR*KQPGNI
Trigger: TATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACGGTATACTGTGTCTaGCAGCTCATCAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTVYCV*QLIKKV
Trigger: CACCTTCTTGATGAGCTGCCAGACACAGTATACCGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAATCAGGAGCAACACTaGTGTGATCCACTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPNQEQH*CDPLWG
Trigger: ACCCCAAAGTGGATCACACCAGTGTTGCTCCTGATT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCATGCAAAGTATCTaGGTCCACAGGGACTCCCAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGMQSI*VHRDSQ
Trigger: CTGGGAGTCCCTGTGGACCCAGATACTTTGCATGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTTATCTGCTTCCTCTaGAGCATGGTATGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFICFL*SMVCSQ
Trigger: CTGGCTGCATACCATGCTCCAGAGGAAGCAGATAAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGCGGAAGTCTCAGTaGAGGCACCATCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMRKSQ*RHHLQQ
Trigger: TTGCTGCAGATGGTGCCTCCACTGAGACTTCCGCAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTTGAAGCCTCTCCTTaGGAGGTCCCAGATGCGGAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVEASP*EVPDAE
Trigger: TTCCGCATCTGGGACCTCCCAAGGAGAGGCTTCAAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTCACTAGGGCCACCTaGGCATCTGTGCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFTRAT*ASVPLP
Trigger: AGGGAGTGGCACAGATGCCCAGGTGGCCCTAGTGAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTCATGCCATTGTGCTaGGTCTTCGCTGTGGCACTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFMPLC*VFAVAL
Trigger: CAGTGCCACAGCGAAGACCCAGCACAATGGCATGAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGCCATGTTGGGACTaGACAGGTCTAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWPCWD*TGLSCE
Trigger: CTCACAGCTTAGACCTGTCCAGTCCCAACATGGCCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAAAGGCTACTGGGCTaGTTCACAATCCGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPKRLLG*FTIRES
Trigger: ACTTTCCCGGATTGTGAACCAGCCCAGTAGCCTTTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCAAAGCTGGTGGGGTTaGGAGTGTTGGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVQSWWG*ECWLLL
Trigger: CAACAGCAACCAACACTCCCAACCCCACCAGCTTTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCTCCCAAAGCTGGTaGGGTTGGGAGTGTTGGTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLSQSW*GWECWL
Trigger: CAACCAACACTCCCAACCCCACCAGCTTTGGGAGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACCTCTCCCAAAGCTaGTGGGGTTGGGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNLSQS*WGWECW
Trigger: CCAACACTCCCAACCCCACCAGCTTTGGGAGAGGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTCTGCTTCCCCACTTaGCCTTGTGGGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFCFPT*PCGTQF
Trigger: GAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCCGCCACAGCTGGTaGGGCATCCCCAGGAGTGGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFRHSW*GIPRSG
Trigger: TCCACTCCTGGGGATGCCCCACCAGCTGTGGCGGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCACGGCAGAATCTCTaGTGGAAGAGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPRQNL*WKSSQR
Trigger: CCTCTGAGAGCTCTTCCACCAGAGATTCTGCCGTGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCCTCCTGAATGGCTaGAGGCAGGGCAGCCAGAAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFLLNG*RQGSQK
Trigger: TTTCTGGCTGCCCTGCCTCCAGCCATTCAGGAGGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGAGGGCAGAGTCTaGATGAAGGTCACAGGGTCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSEGRV*MKVTGS
Trigger: GGACCCTGTGACCTTCATCCAGACTCTGCCCTCAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCAAGGCGAGTATACTaGACCCCACGGTTGCCACTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFARRVY*TPRLPL
Trigger: AAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAAGAAAGGGCTTCGTaGTCCAGAAGGAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQERAS*SRRSRP
Trigger: AGGACGGCTCCTTCTGGACCACGAAGCCCTTTCTTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGGGGACGGTTCTCATaGCTACTTGACCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRGRFS*LLDPQL
Trigger: GAGCTGTGGGTCAAGTAGCCATGAGAACCGTCCCCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGAGCCAGGAAAGCTaGTTGGAGCTCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVESQES*LELFDS
Trigger: GGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCTTGGGGATGGATGTaGACGGTGGAGCCACCGCTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAWGWM*TVEPPL
Trigger: AAGCGGTGGCTCCACCGTCCACATCCATCCCCAAGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCGCTGCTGTGTGAAGTaGCTGGGAAATACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRCCVK*LGNTLA
Trigger: GGCCAAGGTATTTCCCAGCCACTTCACACAGCAGCG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCGCTGCTGTGTGAAGTaGCTGGGAAATACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRCCVK*LGNTLA
Trigger: GGCCAAGGTATTTCCCAGCCACTTCACACAGCAGCG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGCCTCGAGGCTGTATaGAGAGGTTTCCCCCTCACC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGLEAV*RGFPLT
Trigger: GGTGAGGGGGAAACCTCTCCATACAGCCTCGAGGCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCATGAGCTGCCCCAGTaGAGAGGCCTCGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHELPQ*RGLEAV
Trigger: TACAGCCTCGAGGCCTCTCCACTGGGGCAGCTCATG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGTGGCAGTGGTGGTaGAGGAAGCACCGCTGCCAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARWQWW*RKHRCQ
Trigger: CTGGCAGCGGTGCTTCCTCCACCACCACTGCCACCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTGAGGTGGCAGTGGTaGTGGAGGAAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLRWQW*WRKHRC
Trigger: GCAGCGGTGCTTCCTCCACCACCACTGCCACCTCAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGAGGGTTTCACATTaGGCTCGCCGCTGCTGCTCG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVERVSH*ARRCCS
Trigger: CGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAGCTTGGTGGTCTGTaGCTGCTCCTCAGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQLGGL*LLLRQA
Trigger: GGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGCCCTTCAGCTTGGTaGTCTGTGGCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCPSAW*SVAAPQ
Trigger: CTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGACATAGAAGGCAGCTaGAGCTCCCGGCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKDIEGS*SSRPPK
Trigger: TTTGGGTGGCCGGGAGCTCCAGCTGCCTTCTATGTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTGTCGTCCCGGAGCTaGATGATGACCTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVSSRS*MMTCST
Trigger: GGTACTACAGGTCATCATCCAGCTCCGGGACGACAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCCTTCTCCCCCTGTaGGGTTCCATCGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFLLPL*GSIGGN
Trigger: ATTGCCTCCGATGGAACCCCACAGGGGGAGAAGGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCTCTCCCGCTCTGTaGCATGGACCAGAAAGAAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCSPAL*HGPERR
Trigger: CCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGCCCATCAGCAAGGTaGGTCGTGGACTGCCGTAGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGPSAR*VVDCRR
Trigger: CCTACGGCAGTCCACGACCCACCTTGCTGATGGGCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTTGCAGTGGGAAGATaGATTGATGGTGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVAVGR*IDGVGD
Trigger: GTCACCTACACCATCAATCCATCTTCCCACTGCAAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAAACTCCAAACTCTTaGACCTCAGTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQTPNS*TSVLKV
Trigger: CACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGAAGATGGGGCAGCTaGGACACACACGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGRWGS*DTHGEL
Trigger: CAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAGTTGCACCAGTGGTaGAGGCAGGTGGGCAAGCGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKLHQW*RQVGKR
Trigger: CCGCTTGCCCACCTGCCTCCACCACTGGTGCAACTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGGAAGTTGCACCAGTaGTGGAGGCAGGTGGGCAAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRKLHQ*WRQVGK
Trigger: CTTGCCCACCTGCCTCCACCACTGGTGCAACTTCCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATACATATAGGAGATTaGGGACTGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITIHIGD*GLPAPL
Trigger: AAGTGGTGCTGGCAGTCCTCAATCTCCTATATGTAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGATCCCAGACGAGTaGTGTAGTTTGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQIPDE*CSLIFC
Trigger: GCAAAAGATCAAACTACATCACTCGTCTGGGATCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCATGCAGTCTGGCCTaGACTGCCTGCAATCGCTTC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVACSLA*TACNRF
Trigger: GAAGCGATTGCAGGCAGTTCAGGCCAGACTGCATGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCTTATCCGTTATCTaGAGGACATCTACCAACTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCLSVI*RTSTNS
Trigger: GGAGTTGGTAGATGTCCTTCAGATAACGGATAAGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCTTATCCGTTATCTaGAGGACATCTACCAACTCC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCLSVI*RTSTNS
Trigger: GGAGTTGGTAGATGTCCTTCAGATAACGGATAAGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCTGCCTTCTGGATTaGTGGCTTCTGACAGATGTA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITICLLD*WLLTDV
Trigger: TACATCTGTCAGAAGCCATCAATCCAGAAGGCAGAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATCTGCCTTCTGGATTaGTGGCTTCTGACAGATGTA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPICLLD*WLLTDV
Trigger: TACATCTGTCAGAAGCCATCAATCCAGAAGGCAGAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAAATTTTTGCAGCATaGGGTGGTAGGGATACTTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPEIFAA*GGRDTS
Trigger: GGAAGTATCCCTACCACCTCATGCTGCAAAAATTTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCCATCAGGCAAGTCTaGGTGTTCCAATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFAIRQV*VFQSLR
Trigger: TCTGAGGGATTGGAACACTCAGACTTGCCTGATGGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCCATCAGGCAAGTCTaGGTGTTCCAATCCCTCAGA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAIRQV*VFQSLR
Trigger: TCTGAGGGATTGGAACACTCAGACTTGCCTGATGGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTAAAGGCTGCTTTCTaGGTTACCACAAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVKAAF*VTTRKR
Trigger: GCGCTTCCTTGTGGTAACTCAGAAAGCAGCCTTTAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTTGCTGGTTGACTTaGGGTTCCCGGCGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACCWLT*GSRREP
Trigger: TGGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAACAACTCCTCCCATaGTTGGAGGAGGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFEQLLP*LEEGGL
Trigger: TAACCCACCCTCCTCCAATCATGGGAGGAGTTGTTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCAACTTCCTCAGGTaGCTCTGCCCTTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSNFLR*LCPLIH
Trigger: ATGGATCAAAGGGCAGAGTCACCTGAGGAAGTTGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTTCCCACACCTGATTaGCTACTTGCTTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLPTPD*LLASES
Trigger: TGATTCTGAAGCAAGTAGTCAATCAGGTGTGGGAAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGCAGTGTGGCCATCTaGCTTATCCACTCTGACACG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGSVAI*LIHSDT
Trigger: CGTGTCAGAGTGGATAAGTCAGATGGCCACACTGCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTCTTCGGCCTGCAGTaGATCGCACGCTTGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFFGLQ*IARLSL
Trigger: GAGAGACAAGCGTGCGATTCACTGCAGGCCGAAGAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAACCCATTGAAGCCTaGGCTCTGGGTCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPKPIEA*ALGQIQ
Trigger: TTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTCTGACGCGTAAGTaGCCGGTACTGCTGGTATAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKALTRK*PVLLVY
Trigger: GTATACCAGCAGTACCGGTCACTTACGCGTCAGAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCAAAGTCACTGCTCTaGCGCGTAAGTGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSKSLL*RVSDRY
Trigger: GTACCGGTCACTTACGCGTCAGAGCAGTGACTTTGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCACTGCAGTCCTCTTTaGTCAGTTCAGACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHCSPL*SVQTGP
Trigger: TGGGCCAGTCTGAACTGATCAAAGAGGACTGCAGTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCTTCAGAGCAGCATTaGCTGTGTTGGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSASEQH*LCWPCW
Trigger: CCAACATGGCCAACACAGTCAATGCTGCTCTGAAGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCACCTCTGTCTGAGTaGCATCATGATCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPPLSE*HHDPPP
Trigger: AGGAGGAGGATCATGATGTCACTCAGACAGAGGTGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAACCTGCATCTCTTGTaGACTGAGCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNLHLL*TEHLRL
Trigger: CAGCCTGAGGTGCTCAGTTCACAAGAGATGCAGGTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACCTGCATCTCTTGTaGACTGAGCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNLHLL*TEHLRL
Trigger: CAGCCTGAGGTGCTCAGTTCACAAGAGATGCAGGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGATGTCAGCAGCAGCTaGGGGACCAAGCAACCTCTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDVSSS*GTKQPL
Trigger: CAGAGGTTGCTTGGTCCCTCAGCTGCTGCTGACATC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCATAGGCGTCCCATCTaGGAGATTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHRRPI*EILFSG
Trigger: TCCACTGAACAGAATCTCTCAGATGGGACGCCTATG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGTTGGTTGCTGTTGTaGGGATTGCAGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCWLLL*GLQSAK
Trigger: CTTGGCACTCTGCAATCCTCACAACAGCAACCAACA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGAGACTGCAGCTCCTaGGGAACCTCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGDCSS*GTSPKA
Trigger: AGCTTTGGGAGAGGTTCCTCAGGAGCTGCAGTCTCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGGATAACTCCATCTaGGTTGTTTCTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGDNSI*VVSASP
Trigger: TGGGGAAGCAGAAACAACTCAGATGGAGTTATCCCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTCTCTGGGGAAAGTaGGGTTATAGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSLWGK*GYSGSW
Trigger: CCAGCTCCCACTATAACCTCACTTTCCCCAGAGAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTTCTAGCTGACTGCTaGCAGCCGTCAGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLLADC*QPSVHQ
Trigger: CTGATGCACTGACGGCTGTCAGCAGTCAGCTAGAAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGAGAGCCTTCTAGCTaGCTGCTGACAGCCGTCAGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGEPSS*LLTAVS
Trigger: ACTGACGGCTGTCAGCAGTCAGCTAGAAGGCTCTCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCCAGTACTTCCTCCTaGATGGCTGGAGGCAGGGCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAASTSS*MAGGRA
Trigger: TGCCCTGCCTCCAGCCATTCAGGAGGAAGTACTGGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACTACGGCGCAGGTCTaGGGGCAGAGTCTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTTAQV*GQSLDE
Trigger: TTCATCCAGACTCTGCCCTCAGACCTGCGCCGTAGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACAGACGCTCATGCATaGGCTGTCGCTGCCGGGCTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQATDAHA*AVAAGL
Trigger: AAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTTCTCATGGCTACTTaGCCCACAGCTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVLMAT*PTALAR
Trigger: TCGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGCATCCATGGATACTaGGAGCCAGGAAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCIHGY*EPGKLV
Trigger: AACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCTGAACGCTGGATCTaGAATATATTAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPPERWI*NILVLQ
Trigger: CTGCAGGACTAATATATTTCAGATCCAGCGTTCAGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCTGAACGCTGGATCTaGAATATATTAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPERWI*NILVLQ
Trigger: CTGCAGGACTAATATATTTCAGATCCAGCGTTCAGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCTTGGCCAATTGAATaGGTGTATCCAAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPWPIE*VYPKRV
Trigger: GACACGTTTTGGATACACTCATTCAATTGGCCAAGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGTCCGCTGCTGTGTaGAGTGGCTGGGAAATACCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWSAAV*SGWEIP
Trigger: AGGTATTTCCCAGCCACTTCACACAGCAGCGGACCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCGGATGACTGGGTGTaGCAACATGTTCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSADDWV*QHVHEL
Trigger: CAGCTCATGAACATGTTGTCACACCCAGTCATCCGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTAGCTGGTTTTCAGTaGGGCCAGAGGACACCATCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVAGFQ*GQRTPS
Trigger: AGATGGTGTCCTCTGGCCTCACTGAAAACCAGCTAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACATTCAGTAGCAGCTTaGGAACAGTGTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHSVAA*EQCPGS
Trigger: GGACCCGGGACACTGTTCTCAAGCTGCTACTGAATG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGGAGGCTCGTCCTTaGTGTGTGCCAGCTGGCTCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAEEARP*CVPAGS
Trigger: AGAGCCAGCTGGCACACATCAAGGACGAGCCTCCTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTTAACACAGTGCGGTaGGTCTCTGCAAAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFNTVR*VSAKRR
Trigger: CCTTCGCTTTGCAGAGACTCACCGCACTGTGTTAAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAAATATTTGCGCTTaGCATCAAAGTCGAGGACAC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGNICA*HQSRGH
Trigger: GTGTCCTCGACTTTGATGTCAAGCGCAAATATTTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGACTCGATCACCAGGTaGGGTACGGAACAAGGCATA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDSITR*GTEQGI
Trigger: TATGCCTTGTTCCGTACCTCACCTGGTGATCGAGTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCTTGGAAGTACCTGTaGCAAACTGGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPWKYL*QTGGTW
Trigger: CCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAAACATGTGTGAGCTaGAGGCAGGCGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKTCVS*RQAICG
Trigger: TCCACAGATCGCCTGCCTTCAGCTCACACATGTTTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCTGAACACAGAATCTaGGGAGCACACTGTTCAAAC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSEHRI*GAHCSN
Trigger: GTTTGAACAGTGTGCTCCTCAGATTCTGTGTTCAGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGTCTGTCCAGCATCTaGCAGTATTCCATCGAAGCG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCLSSI*QYSIEA
Trigger: CGCTTCGATGGAATACTGGCAGATGCTGGACAGACA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGTCTGGCCTGAACTaGCTGCAATCGCTTCCTGTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQSGLN*LQSLPV
Trigger: CACAGGAAGCGATTGCAGGCAGTTCAGGCCAGACTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAGAGAGGAGGACAGTaGTTTCCCACACCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKERGGQ*FPTPGN
Trigger: GTTCCCTGGTGTGGGAAAGCACTGTCCTCCTCTCTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAGCCACCTTCCTCTTaGCCTGTATCCTCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFEPPSS*PVSSSP
Trigger: AGGAGAAGAGGATACAGGGCAAGAGGAAGGTGGCTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGTCCATGAGCTGTTaGAGTTGTTGCTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITMSMSC*SCCWLT
Trigger: AGTCAACCAGCAACAACTGCAACAGCTCATGGACAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGAGACATAGCAATTaGTCTCATCATCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITQRHSN*SHHLVL
Trigger: GAGGACCAGATGATGAGAGCAATTGCTATGTCTCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTCTGGACTTCCTTCTaGTCCTTGGCTGCCTGGAGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVWTSF*SLAAWR
Trigger: CCTCCAGGCAGCCAAGGAGCAGAAGGAAGTCCAGAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCATCACCCATGTCTTaGAGGAGCTGGCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSPMS*RSWPTS
Trigger: AGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATCTGTGCCACTCCCTaGAGCAGCCAGGCTTGCGAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAICATP*SSQACE
Trigger: CTCGCAAGCCTGGCTGCTGCAGGGAGTGGCACAGAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTCAGCCATAGCCAGTaGCCGTCCAAGGGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLSHSQ*PSKGCF
Trigger: AAAGCAGCCCTTGGACGGGCACTGGCTATGGCTGAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATGATACACATCACTaGCTGAAGCCTGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPDDTHH*LKPGMF
Trigger: AAACATGCCAGGCTTCAGGCAGTGATGTGTATCATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGTTCATGCCATTGTaGTGGGTCTTCGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLFMPL*WVFAVA
Trigger: TGCCACAGCGAAGACCCAGCACAATGGCATGAACAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTCCTTGGGCATCCTaGTCAGACTTGTTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAPWAS*SDLFLL
Trigger: TAGCAAGAACAAGTCTGAGCAGGATGCCCAAGGAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTGGGTCCTGCTGGTTaGTACTGGAATCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLGPAG*YWNLER
Trigger: CCTCTCAAGATTCCAGTAGCAACCAGCAGGACCCAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTGGGTCCTGCTGGTTaGTACTGGAATCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLGPAG*YWNLER
Trigger: CCTCTCAAGATTCCAGTAGCAACCAGCAGGACCCAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCTCATTCTCAACCTaGATCTCTTGTGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSFST*ISCELS
Trigger: GCTCAGTTCACAAGAGATGCAGGTTGAGAATGAGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGAGAACTGTGGTCTaGATGGCGCACCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQRTVV*MAHHQW
Trigger: CCACTGATGGTGCGCCATGCAGACCACAGTTCTCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACTGAAACACAGTCATaGATGCTCTCAGCATCGAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTETQS*MLSASR
Trigger: TCTCGATGCTGAGAGCATGCATGACTGTGTTTCAGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACTGAAACACAGTCATaGATGCTCTCAGCATCGAGA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTETQS*MLSASR
Trigger: TCTCGATGCTGAGAGCATGCATGACTGTGTTTCAGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGGCTGCTCAGAACTaGCAGCTGCTGAAGTGTCAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWAAQN*QLLKCH
Trigger: GTGACACTTCAGCAGCTGGCAGTTCTGAGCAGCCCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTTCTCGTCGCTGCTaGTCAGCTCTCTGCTGTGCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSSRRC*SALCCA
Trigger: GGCACAGCAGAGAGCTGAGCAGCAGCGACGAGAACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTAGTTCTCGTCGCTaGTGCTCAGCTCTCTGCTGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKASSRR*CSALCC
Trigger: ACAGCAGAGAGCTGAGCAGCAGCGACGAGAACTAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGCATGAGCTGTCGCTaGCGGGCTTCTTGCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVCMSCR*RASCSR
Trigger: ACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCAAACAGACGCTCATaGATGAGCTGTCGCTGCCGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPNRRS*MSCRCR
Trigger: CCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGAGAGTGCGGAGGTaGTACTGTGCCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQRVRR*YCAQTD
Trigger: GTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCCCCATCTGGAAGGTaGCACCTCTCTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPPSGR*HLSAQQ
Trigger: TTGCTGTGCAGAGAGGTGGCACCTTCCAGATGGGGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGTATCTACATTACTaGCAGAAGGCCTGTTATGGC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPEYLHY*QKACYG
Trigger: GCCATAACAGGCCTTCTGGCAGTAATGTAGATACTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGCCACCGCTTGCATaGTTCTCGGTATGTTTACGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSEPPLA*FSVCLR
Trigger: GCGTAAACATACCGAGAAGCATGCAAGCGGTGGCTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGTGGAGCCACCGCTTaGATGCTTCTCGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGGATA*MLLGMF
Trigger: AAACATACCGAGAAGCATGCAAGCGGTGGCTCCACC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTATCCAAAACGTGTCTaGAGACAACAGGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPYPKRV*RQQEQL
Trigger: AAGCTGCTCCTGTTGTCTGCAGACACGTTTTGGATA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTATCCAAAACGTGTCTaGAGACAACAGGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITYPKRV*RQQEQL
Trigger: AAGCTGCTCCTGTTGTCTGCAGACACGTTTTGGATA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTTTCTTTGGTCCGCTaGTGTGTGAAGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVSLVR*CVKWLG
Trigger: TCCCAGCCACTTCACACAGCAGCGGACCAAAGAAAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCTACAGGCCTTATTaGCCCTTTCCCGATCACTCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGYRPY*PFPDHS
Trigger: AGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTCTGTACTGCTGCTaGCCCCATCACTCACCTTCG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSLYCC*PHHSPS
Trigger: CGAAGGTGAGTGATGGGGGCAGCAGCAGTACAGACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACCTGCTCTGCATTTTaGCCTTCAGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTCSAF*PSAWWS
Trigger: AGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATGTCAAACCTGCTCTaGATTTTGCCCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPMSNLL*ILPFSL
Trigger: CAAGCTGAAGGGCAAAATGCAGAGCAGGTTTGACAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGTCAAACCTGCTCTaGATTTTGCCCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITMSNLL*ILPFSL
Trigger: CAAGCTGAAGGGCAAAATGCAGAGCAGGTTTGACAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCTAGCCTGCCTGTCTaGTTGGCTTTCTTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPSLPV*LAFLLA
Trigger: GGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACGGAGGAACCTAGCCTaGCTGTCTGCTTGGCTTTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRRNLA*LSAWLS
Trigger: AGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGACTCCGACGTTGCTaGTTGTTGCTGTCTCCGCGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRLRRC*LLLSPR
Trigger: GCGCGGAGACAGCAACAAGCAGCAACGTCGGAGTCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGCACTAGCACCGCATaGTGGTCATGGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSTSTA*WSWDSS
Trigger: AGAGGAATCCCATGACCAGCATGCGGTGCTAGTGCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCGGACAGGAGGCTTaGTCTCCCGCTCTGTGGCAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALGQEA*SPALWH
Trigger: ATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTCGTCCTTGATGTGTaGCAGCTGGCTCTCACGGGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLVLDV*QLALTG
Trigger: ACCCGTGAGAGCCAGCTGGCACACATCAAGGACGAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGTGCGGTGAGTCTCTaGAAAGCGAAGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSAVSL*KAKELL
Trigger: CAGAAGTTCCTTCGCTTTGCAGAGACTCACCGCACT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGTCACGACGGACATaGACAGCCATGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWSRRT*TAMSSF
Trigger: GAAAGAAGACATGGCTGTGCATGTCCGTCGTGACCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGCCGCCAACTGCTTaGGGATGGCTCCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKPPTA*GWLLSF
Trigger: GAATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGAAAGCCGCCAACTaGTTGCGGATGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKKAAN*LRMAPV
Trigger: GACAGGAGCCATCCGCAAGCAGTTGGCGGCTTTCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGCAGCTCTAACTCCTaGTCAGTGAAGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSSSNS*SVKMEM
Trigger: CATTTCCATCTTCACTGAGCAGGAGTTAGAGCTGCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATCGAAAGAACGCAATaGTCTCCAGAACCACTGGAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPIERTQ*SPEPLD
Trigger: ATCCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGGGCAGCAAAGCCTTaGAGGGGTACCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRAAKP*RGTLEV
Trigger: TACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGGGCAGCAAAGCCTTaGAGGGGTACCTTGGAAGTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRAAKP*RGTLEV
Trigger: TACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTTTGTACAACCTGCTaGAGTTTGTTCCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFCTTC*SLFPLS
Trigger: GCTCAAGGGGAACAAACTGCAGCAGGTTGTACAAAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTGTCAAATGCTCTATaGAACTGTACAGATGCCGGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLSNAL*NCTDAG
Trigger: CCCGGCATCTGTACAGTTCCATAGAGCATTTGACAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCTCCTCCGCATGGCTaGGAGGTAATCTGGAGACAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPPPHG*EVIWRQ
Trigger: CTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCTCTTGAAGGACTTTaGGTTCATGTGACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITPLEGL*VHVTVS
Trigger: TGACACTGTCACATGAACCCAAAGTCCTTCAAGAGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTCTGCATATCTGCCTaGCCAAATTCACACCCAGAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFCISA*PNSHPD
Trigger: ATCTGGGTGTGAATTTGGCCAGGCAGATATGCAGAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGATCTTTTTCCGCCCTaGGTCGTACCTGCCTTCTCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDLFPP*VVPAFS
Trigger: TGAGAAGGCAGGTACGACCCAGGGCGGAAAAAGATC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCGCAGTGCACTGAACTaGGGAAAGTTCTGGACACCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRSALN*GKFWTP
Trigger: AGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTGTGGCCTGCTCCATaGTGCTGGTGTTCAACAGTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLWPAP*CWCSTV
Trigger: CACTGTTGAACACCAGCACCATGGAGCAGGCCACAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATGATTGGAGGAGGGTaGGTTAAAAGGTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPMIGGG*VKRYSV
Trigger: CACAGAGTACCTTTTAACCCACCCTCCTCCAATCAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGATTGGAGGAGGGTaGGTTAAAAGGTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITMIGGG*VKRYSV
Trigger: CACAGAGTACCTTTTAACCCACCCTCCTCCAATCAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGCCCTTTGATCCATTaGAATATCCTGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCPLIH*NILSQR
Trigger: TCTCTGGGACAGGATATTCCAATGGATCAAAGGGCA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAGGTGGAAGCAGCCTaGCAACATAGTATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITKVEAA*QHSICE
Trigger: TTCACAGATACTATGTTGCCAGGCTGCTTCCACCTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGGTACTTAGTCATCTaGGCTCTCCTTTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRYLVI*ALLFEE
Trigger: CTCCTCAAAAAGGAGAGCCCAGATGACTAAGTACCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATCATGGCATATTTGTaGTCCCGGGTGAGCCTCAGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVIMAYL*SRVSLR
Trigger: TCTGAGGCTCACCCGGGACCACAAATATGCCATGAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGGGCTTCAAAGGGGTaGTCTTCACCAGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRASKG*SSPAVQ
Trigger: CTGTACAGCTGGTGAAGACCACCCCTTTGAAGCCCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGGGCTTCAAAGGGGTaGTCTTCACCAGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRASKG*SSPAVQ
Trigger: CTGTACAGCTGGTGAAGACCACCCCTTTGAAGCCCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCTTCCTCTGGAGCATaGTATGCAGCCAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSASSGA*YAARAF
Trigger: GAATGCTCTGGCTGCATACCATGCTCCAGAGGAAGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGTCTTGCAGGAGCTaGCCAACCTCTTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMSCRS*PTSWVI
Trigger: TATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGCGGAAGTCTCAGTaGAGGCACCATCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMRKSQ*RHHLQQ
Trigger: TTGCTGCAGATGGTGCCTCCACTGAGACTTCCGCAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATGCGGAAGTCTCAGTaGAGGCACCATCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSMRKSQ*RHHLQQ
Trigger: TTGCTGCAGATGGTGCCTCCACTGAGACTTCCGCAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGGCGCACCATCAGTaGATGGGTGGTAGGGATATT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMAHHQ*MGGRDI
Trigger: AATATCCCTACCACCCATCCACTGATGGTGCGCCAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGTGTCAGAGAACTGTaGTCTGCATGGCGCACCATC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSVREL*SAWRTI
Trigger: GATGGTGCGCCATGCAGACCACAGTTCTCTGACACT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGGTGTGGCCAGTATTaGCCGTCAGCTGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVWCGQY*PSAALG
Trigger: CCCTAAGGCAGCTGACGGCCAATACTGGCCACACCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAACGGGCGATGATGTaGACGTCATCGTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKERAMM*TSSLPT
Trigger: GGTAGGCAACGATGACGTCCACATCATCGCCCGTTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAAAGCTGGTGGGGTTaGGAGTGTTGGTTGCTGTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQSWWG*ECWLLL
Trigger: CAACAGCAACCAACACTCCCAACCCCACCAGCTTTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAACCTCTCCCAAAGCTaGTGGGGTTGGGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKNLSQS*WGWECW
Trigger: CCAACACTCCCAACCCCACCAGCTTTGGGAGAGGTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCTGCTTCCCCACTTaGCCTTGTGGGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFCFPT*PCGTQF
Trigger: GAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGACGAATGCCTAGCTaGTTCTGTAGAACTTCCCGA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGRMPS*FCRTSR
Trigger: TCGGGAAGTTCTACAGAACCAGCTAGGCATTCGTCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAAGAAAGGGCTTCGTaGTCCAGAAGGAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQERAS*SRRSRP
Trigger: AGGACGGCTCCTTCTGGACCACGAAGCCCTTTCTTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCCAGGAAAGCTGGTTaGAGCTCTTTGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVARKAG*SSLTPS
Trigger: AGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGAGCCAGGAAAGCTaGTTGGAGCTCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSESQES*LELFDS
Trigger: GGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACGCTGCTGTGTGAAGTaGCTGGGAAATACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRCCVK*LGNTLA
Trigger: GGCCAAGGTATTTCCCAGCCACTTCACACAGCAGCG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCAAATGCCACTGCTaGAGGACTGTGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCKCHC*RTVRSM
Trigger: CATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACATGAGCTGCCCCAGTaGAGAGGCCTCGAGGCTGTA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAHELPQ*RGLEAV
Trigger: TACAGCCTCGAGGCCTCTCCACTGGGGCAGCTCATG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGAGGTGGCAGTGGTaGTGGAGGAAGCACCGCTGC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALRWQW*WRKHRC
Trigger: GCAGCGGTGCTTCCTCCACCACCACTGCCACCTCAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACAGAGAGCTGTAGCTaGTTTTCAGTGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTESCS*FSVRPE
Trigger: CTCTGGCCTCACTGAAAACCAGCTACAGCTCTCTGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCCTCAGAACAAGAGTaGGATGTCAACACCTCTACA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSEQE*DVNTST
Trigger: TGTAGAGGTGTTGACATCCCACTCTTGTTCTGAGGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTGCAGTAGTACGTTaGCTGCATCCTCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAAVVR*LHPLSL
Trigger: AAGGCTTAGAGGATGCAGCCAACGTACTACTGCAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTTTGCCCTTCAGCTTaGTGGTCTGTGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFCPSA*WSVAAP
Trigger: AGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTTTGCCCTTCAGCTTaGTGGTCTGTGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFCPSA*WSVAAP
Trigger: AGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGACATAGAAGGCAGCTaGAGCTCCCGGCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDIEGS*SSRPPK
Trigger: TTTGGGTGGCCGGGAGCTCCAGCTGCCTTCTATGTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGCCGAACAGCTGCCTaGATGCTGCTAGCTGAGCCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVCRTAA*MLLAEP
Trigger: AGGCTCAGCTAGCAGCATCCAGGCAGCTGTTCGGCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAACAGACGCCTCTGACTaGCTAGACTCCGACGTTGCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKTDASD*LDSDVA
Trigger: AGCAACGTCGGAGTCTAGCCAGTCAGAGGCGTCTGT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGTATCTTGAGCACTaGGAGATGGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVEYLEH*EMAGPH
Trigger: ATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACTAGCACCGCATGCTaGTCATGGGATTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTSTAC*SWDSSS
Trigger: ACTAGAGGAATCCCATGACCAGCATGCGGTGCTAGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGTCATATACAGCTTTaGCCACAATGCGTCCGACAA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITCHIQL*PQCVRQ
Trigger: TTGTCGGACGCATTGTGGCCAAAGCTGTATATGACA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTGTCATATACAGCTTTaGCCACAATGCGTCCGACAA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPCHIQL*PQCVRQ
Trigger: TTGTCGGACGCATTGTGGCCAAAGCTGTATATGACA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGTCATAGCCTAGTGTaGAGACATCATTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPGHSLV*RHHFPA
Trigger: TGCTGGAAAATGATGTCTCCACACTAGGCTATGACC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCTGTCATTCTCATCTaGCATACCAGGTGTACATAC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPPVILI*HTRCTY
Trigger: GTATGTACACCTGGTATGCCAGATGAGAATGACAGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCAACTGCTTGCGGATaGCTCCTGTCATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPTACG*LLSFSS
Trigger: AGATGAGAATGACAGGAGCCATCCGCAAGCAGTTGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTACCTGTGACAAACTaGAGGAACTTGGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVPVTN*RNLARS
Trigger: TGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCAATGTTCCATGTTTTaGTCTGCTGCAGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPQCSMF*SAAVPR
Trigger: TCTTGGAACTGCAGCAGATCAAAACATGGAACATTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTCAGAAGGGCTTTCTaGAATCTTGTCAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITFRRAF*NLVKLL
Trigger: GAGCAACTTGACAAGATTTCAGAAAGCCCTTCTGAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTCAGAAGGGCTTTCTaGAATCTTGTCAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFRRAF*NLVKLL
Trigger: GAGCAACTTGACAAGATTTCAGAAAGCCCTTCTGAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCGCCAAGAAACTTTATaGCCTTCAATAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRQETL*PSIRLP
Trigger: TGGAAGCCTTATTGAAGGTCATAAAGTTTCTTGGCG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTTTTAAGGGTGGGCTaGTGTCTCATGAGCTCATCG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVLRVG*CLMSSS
Trigger: CGATGAGCTCATGAGACATCAGCCCACCCTTAAAAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGATTGATGGCTTCTaGCAGATGTATTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWIDGF*QMYLGS
Trigger: GGACCCCAAATACATCTGTCAGAAGCCATCAATCCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTACCAACAACCTGCTaGTTAGGCTCAGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVPTTC*LGSVSF
Trigger: AAATGAAACTGAGCCTAATCAGCAGGTTGTTGGTAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGAAGCGCAGTGCACTaGACTGGGGAAAGTTCTGGA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGSAVH*TGESSG
Trigger: TCCAGAACTTTCCCCAGTTCAGTGCACTGCGCTTCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTAAAGGCTGCTTTCTaGGTTACCACAAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVKAAF*VTTRKR
Trigger: GCGCTTCCTTGTGGTAACTCAGAAAGCAGCCTTTAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAACAACTCCTCCCATaGTTGGAGGAGGGTGGGTTA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKEQLLP*LEEGGL
Trigger: TAACCCACCCTCCTCCAATCATGGGAGGAGTTGTTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCAGCTTCCCACACCTaGTTGACTACTTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAASHT*LTTCFR
Trigger: TCTGAAGCAAGTAGTCAATCAGGTGTGGGAAGCTGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTACAGGGGTCCTCAATaGTGTGTCTTAAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVYRGPQ*CVLREG
Trigger: CCCTTCTCTTAAGACACATCATTGAGGACCCCTGTA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAACCTTTTCCATGGTATaGCGAAGGGTACAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKTFSMV*RRVQGS
Trigger: GGACCCCTGTACCCTTCGTCATACCATGGAAAAGGT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCCACTTGTAGCTGCTaGGCGAACAACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSTCSC*ANNLFH
Trigger: ATGGAAAAGGTTGTTCGCTCAGCAGCTACAAGTGGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCTCTGACGCGTAAGTaGCCGGTACTGCTGGTATAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVALTRK*PVLLVY
Trigger: GTATACCAGCAGTACCGGTCACTTACGCGTCAGAGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCAAAGTCACTGCTCTaGCGCGTAAGTGACCGGTAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSKSLL*RVSDRY
Trigger: GTACCGGTCACTTACGCGTCAGAGCAGTGACTTTGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTTCAGAGCAGCATTaGCTGTGTTGGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKASEQH*LCWPCW
Trigger: CCAACATGGCCAACACAGTCAATGCTGCTCTGAAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGGTGGAAGCTTGGCTaGGGTTGGAAGGAGCTTCAT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRWKLG*GWKELH
Trigger: ATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTGAGACGAGTTGTTaGAGAGCCACTGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGETSC*RATAQC
Trigger: ACACTGGGCAGTGGCTCTTCAACAACTCGTCTCACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCATCAGAACGGGCGATaGTGTGGACGTCATCGTTGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHQNGR*CGRHRC
Trigger: GCAACGATGACGTCCACATCATCGCCCGTTCTGATG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCAGGAATTCCAGGTaGTTGACAATGGACACTTTA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLRNSR*LTMDTL
Trigger: TAAAGTGTCCATTGTCAATCACCTGGAATTCCTGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGAGACTGCAGCTCCTaGGGAACCTCTCCCAAAGCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGDCSS*GTSPKA
Trigger: AGCTTTGGGAGAGGTTCCTCAGGAGCTGCAGTCTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGGGATAACTCCATCTaGGTTGTTTCTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGDNSI*VVSASP
Trigger: TGGGGAAGCAGAAACAACTCAGATGGAGTTATCCCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTTCTAGCTGACTGCTaGCAGCCGTCAGTGCATCAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLLADC*QPSVHQ
Trigger: CTGATGCACTGACGGCTGTCAGCAGTCAGCTAGAAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGAACTGCCAGCTGCTaGAGTGTCACCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARTASC*SVTHSL
Trigger: GAGGCTGTGGGTGACACTTCAGCAGCTGGCAGTTCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCTCGTCTCAGGGCTTaGGCCTCAGCTGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSRLRA*ASAAMS
Trigger: TGACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGCATCCATGGATACTaGGAGCCAGGAAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCIHGY*EPGKLV
Trigger: AACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCGGATGACTGGGTGTaGCAACATGTTCATGAGCTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKADDWV*QHVHEL
Trigger: CAGCTCATGAACATGTTGTCACACCCAGTCATCCGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGTAGTGGGAGAAATTaGAACAGTAGTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSGRN*NSSGSS
Trigger: ACTGCTACCACTACTGTTTCAATTTCTCCCACTACT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCATTCAGTAGCAGCTTaGGAACAGTGTCCCGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHSVAA*EQCPGS
Trigger: GGACCCGGGACACTGTTCTCAAGCTGCTACTGAATG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCCAAAGGTCGCTTCTaGGATGCCACAATTACCACA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPKGRF*DATITT
Trigger: TGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVCLRAL*PSRTIC
Trigger: ACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTTAACACAGTGCGGTaGGTCTCTGCAAAGCGAAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFNTVR*VSAKRR
Trigger: CCTTCGCTTTGCAGAGACTCACCGCACTGTGTTAAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACATCTCTCGAGAGATaGTCATATACCACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTSLER*SYTTPA
Trigger: TGCGGGAGTGGTATATGATCATCTCTCGAGAGATGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGCCCCATTGGGTTTaGGGTCACGAACTTCACAAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWPHWV*GHELHK
Trigger: TTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGGCACGGTCAGCTTaGTCGAAAGAACGCAATGCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLARSA*SKERNA
Trigger: AGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGGCACGGTCAGCTTaGTCGAAAGAACGCAATGCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLARSA*SKERNA
Trigger: AGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAAAACATGTGTGAGCTaGAGGCAGGCGATCTGTGGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFKTCVS*RQAICG
Trigger: TCCACAGATCGCCTGCCTTCAGCTCACACATGTTTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACTGCCAGCACCACTTaGATATCAGAGGAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTASTT*ISEEAN
Trigger: ATTGGCTTCCTCTGATATGCAAGTGGTGCTGGCAGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGGGATTGAAAAGCTaGCATATCCAGGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITMGLKS*HIQVGD
Trigger: ATCACCAACCTGGATATGGCAGCTTTTCAATCCCAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGGAGCAGTGGCAGTaGCATCTGCCTTCTGGATTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVEEQWQ*HLPSGL
Trigger: CAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATCAGCAACATTGCCTaGGCAAGCCAGTTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSISNIA*ASQFSQ
Trigger: TTGCGAGAACTGGCTTGCGCAGGCAATGTTGCTGAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTTGGAACCAGTTTCTaGATATCTGCCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFGTSF*ISAWPN
Trigger: ATTTGGCCAGGCAGATATGCAGAAACTGGTTCCAAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTATATGGTGGGGGCTaGCAAGATAACCCCTTAGTC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVYGGG*QDNPLV
Trigger: GACTAAGGGGTTATCTTGGCAGCCCCCACCATATAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTAGGAATTCTCCTGTaGCATCAGGCAAGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLGILL*HQASLS
Trigger: ACTCAGACTTGCCTGATGGCACAGGAGAATTCCTAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCACAAGGAAGCGCAGTaGACTGAACTGGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHKEAQ*TELGKV
Trigger: AACTTTCCCCAGTTCAGTGCACTGCGCTTCCTTGTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTATCTTCTTCGGCCTaGAGTGAATCGCACGCTTGT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVSSSA*SESHAC
Trigger: ACAAGCGTGCGATTCACTGCAGGCCGAAGAAGATAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGATCAGATTTATCTaGTTCCTCTGGAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRIRFI*FLWSMV
Trigger: TACCATGCTCCAGAGGAAGCAGATAAATCTGATCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGGATCAGATTTATCTaGTTCCTCTGGAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPRIRFI*FLWSMV
Trigger: TACCATGCTCCAGAGGAAGCAGATAAATCTGATCCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGGAAAAACCTGACTaGGTATCAAAGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITMEKPD*VSKSLL
Trigger: GAGCAGTGACTTTGATACGCAGTCAGGTTTTTCCAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCTTCGCTGTGGCACTaGTGTAGAAGCTGGAGGTGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSSLWH*CRSWRW
Trigger: CCACCTCCAGCTTCTACAGCAGTGCCACAGCGAAGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCTCCTTGGGCATCCTaGTCAGACTTGTTCTTGCTA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAPWAS*SDLFLL
Trigger: TAGCAAGAACAAGTCTGAGCAGGATGCCCAAGGAGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTGGGTCCTGCTGGTTaGTACTGGAATCTTGAGAGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLGPAG*YWNLER
Trigger: CCTCTCAAGATTCCAGTAGCAACCAGCAGGACCCAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTCATCCTCGTTACTaGCACTGCTGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPHPRY*HCCPLP
Trigger: AGGAAGAGGACAGCAGTGGCAGTAACGAGGATGAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGTTGAAGAGCCACTaGCCAGTGTCAGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLLKSH*PVSENC
Trigger: ACAGTTCTCTGACACTGGGCAGTGGCTCTTCAACAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGACCAAGCAACCTCTaGAGTATAAGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGPSNL*SIRGGL
Trigger: CAACCCTCCTCTTATACTGCAGAGGTTGCTTGGTCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGACCAAGCAACCTCTaGAGTATAAGAGGAGGGTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGPSNL*SIRGGL
Trigger: CAACCCTCCTCTTATACTGCAGAGGTTGCTTGGTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTAGGGGAAGGCTGCTaGTCAGCTGAAGGATGTCAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVGEGC*SAEGCQ
Trigger: CTGACATCCTTCAGCTGAGCAGCAGCCTTCCCCTAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGCATCGAGAACTTTaGATTCTTCTGTCCAGCGGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQHREL*ILLSSG
Trigger: CCCGCTGGACAGAAGAATGCAAAGTTCTCGATGCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGCCAGTTGTTTCCTaGGCTTCTCTCGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQPVVS*ASLAFL
Trigger: AAGAAAGGCGAGAGAAGCGCAGGAAACAACTGGCTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGCCAGTTGTTTCCTaGGCTTCTCTCGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQPVVS*ASLAFL
Trigger: AAGAAAGGCGAGAGAAGCGCAGGAAACAACTGGCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGATGCAGTACACTGTaGACTCTGATCCCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRCSTL*TLIPVL
Trigger: GAGAACAGGGATCAGAGTGCACAGTGTACTGCATCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGAGTGGAGCTGCCTaGTCTGGGCTGCTCAGAACT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARSGAA*SGLLRT
Trigger: AGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGATTCCTCGGGAATCTaGTCCAGAAATGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDSSGI*SRNGHG
Trigger: GCCGTGGCCATTTCTGGAGCAGATTCCCGAGGAATC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCAGCTCTCTGCTGTaGCAGTACTTCCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLSSLL*QYFLLN
Trigger: ATTCAGGAGGAAGTACTGGCACAGCAGAGAGCTGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCGGAGGTGCTACTGTaGCCAAACAGACGCTCATGC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAAEVLL*PNRRSC
Trigger: GCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCAGAGAGTGCGGAGGTaGTACTGTGCCCAAACAGAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVQRVRR*YCAQTD
Trigger: GTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCCCCATCTGGAAGGTaGCACCTCTCTGCACAGCAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPPSGR*HLSAQQ
Trigger: TTGCTGTGCAGAGAGGTGGCACCTTCCAGATGGGGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTCTCACTGCTGCGCTaGAAGATGGAGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLSLLR*KMESRL
Trigger: CAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTTTCTTTGGTCCGCTaGTGTGTGAAGTGGCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVSLVR*CVKWLG
Trigger: TCCCAGCCACTTCACACAGCAGCGGACCAAAGAAAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGCTACAGGCCTTATTaGCCCTTTCCCGATCACTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGYRPY*PFPDHS
Trigger: AGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGAAGTCTGTGCAAATaGCACTGCTGGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRSLCK*HCWRTV
Trigger: CACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACATTGGGCTCGCCGCTaGTGCTCGAGGTTGTATTCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAHWARR*CSRLYS
Trigger: GGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALVVCG*SSGRPS
Trigger: TGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACCTGCTCTGCATTTTaGCCTTCAGCTTGGTGGTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTCSAF*PSAWWS
Trigger: AGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGCACTAGCACCGCATaGTGGTCATGGGATTCCTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSTSTA*WSWDSS
Trigger: AGAGGAATCCCATGACCAGCATGCGGTGCTAGTGCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCGTCCTTGATGTGTaGCAGCTGGCTCTCACGGGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALVLDV*QLALTG
Trigger: ACCCGTGAGAGCCAGCTGGCACACATCAAGGACGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGCTTGAGGAGATGTaGATAGATGAGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRLEEM*IDEGSR
Trigger: CCGGGAGCCCTCATCTATGCACATCTCCTCAAGCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCTGGTTTAACACAGTaGGGTGAGTCTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSGLTQ*GESLQS
Trigger: GCTTTGCAGAGACTCACCGCACTGTGTTAAACCAGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGGTGGGTCGTGGACTaGCGTAGGATCTGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRWVVD*RRIWFN
Trigger: GTTAAACCAGATCCTACGGCAGTCCACGACCCACCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTTCTTCGGGGGATTTaGGATGCAGCTCACGATAGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFLRGI*DAAHDR
Trigger: CCTATCGTGAGCTGCATCGCAAATCCCCCGAAGAAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAGCCGCCAACTGCTTaGGGATGGCTCCTGTCATTC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKPPTA*GWLLSF
Trigger: GAATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGACAGACAGGTCCCTaGAAAGGCTACTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGQTGP*KGYCLF
Trigger: AAAAAGGCAGTAGCCTTTGCAGGGACCTGTCTGTCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGACAGACAGGTCCCTaGAAAGGCTACTGCCTTTTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGQTGP*KGYCLF
Trigger: AAAAAGGCAGTAGCCTTTGCAGGGACCTGTCTGTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCAATTCCTGGTGAACTaGTCATCTCTCCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVQFLVN*SSLLTA
Trigger: TGCAGTCAGGAGAGATGAGCAGTTCACCAGGAATTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTTCCTTACAAGCACTaGCAAAAATCCATGGTAGGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVPYKH*QKSMVG
Trigger: TCCTACCATGGATTTTTGCCAGTGCTTGTAAGGAAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAACTGGTGAGGGTATaGATCCATGGAAGGATCAAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPKLVRV*IHGRIN
Trigger: ATTGATCCTTCCATGGATCCATACCCTCACCAGTTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTGACAAATGTTATCTaGTCCTGTTCATCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVTNVI*SCSSPR
Trigger: TCTTGGCGATGAACAGGACCAGATAACATTTGTCAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGAAAGCAGGGTCTTaGATGGCCTTCTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVEKAGS*MAFLRK
Trigger: TTTCCTCAAGAAGGCCATCCAAGACCCTGCTTTCTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTCTCCTCCTCCGCATaGCTGGGAGGTAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFSSSA*LGGNLE
Trigger: CTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTGACAGATGTATTTaGGGTCCCTTCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSDRCI*GPFQDY
Trigger: GTAATCTTGGAAGGGACCCCAAATACATCTGTCAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGACAGGCAGCAGATGTaGGAAAGTCAATGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDRQQM*ESQWAD
Trigger: ATCTGCCCATTGACTTTCCCACATCTGCTGCCTGTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGACAGGCAGCAGATGTaGGAAAGTCAATGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDRQQM*ESQWAD
Trigger: ATCTGCCCATTGACTTTCCCACATCTGCTGCCTGTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCAGGGAGGAGAGGATaGAGTCCAACTGAAGGAGAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPGRRG*SPTEGD
Trigger: GTCTCCTTCAGTTGGACTCCATCCTCTCCTCCCTGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGGAACAGTATAACTaGCTCAGCTTGCTCAAAACA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITREQYN*LSLLKT
Trigger: TGTTTTGAGCAAGCTGAGCCAGTTATACTGTTCCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGGGAACAGTATAACTaGCTCAGCTTGCTCAAAACA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPREQYN*LSLLKT
Trigger: TGTTTTGAGCAAGCTGAGCCAGTTATACTGTTCCCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGCTCGGCCTAATCTaGAGGAAGCTGATAACAAAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVLGLI*RKLITK
Trigger: CTTTGTTATCAGCTTCCTCCAGATTAGGCCGAGCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCACCTCCAGGCAATTTaGCAGGCAGCGAATGTGGAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHLQAI*QAANVE
Trigger: CTCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGATGTGGCATAGAATaGCCAGCATCGATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGCGIE*PASIQP
Trigger: TGGCTGAATCGATGCTGGCCATTCTATGCCACATCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTCCTCGGAGGATGTaGCATAGAATGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSPRRM*HRMASI
Trigger: GATGCTGGCCATTCTATGCCACATCCTCCGAGGAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTAAAAGGTACTCTGTaGCCTGCTCCATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLKGTL*PAPWCW
Trigger: CCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGTGTGATCCACTTTaGGGTCTGGACTTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWCDPL*GLDFLL
Trigger: CAGAAGGAAGTCCAGACCCCAAAGTGGATCACACCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACCATTGTAGTGAATTaGACCGTGTATCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTIVVN*TVYLLR
Trigger: CCGAAGAAGATACACGGTCCAATTCACTACAATGGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTTCTGTCAAGCCCTaGATCAGGATCTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSVKP*IRISPI
Trigger: AATCGGGGAGATCCTGATCCAGGGCTTGACAGAAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTTCTGTCAAGCCCTaGATCAGGATCTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSSVKP*IRISPI
Trigger: AATCGGGGAGATCCTGATCCAGGGCTTGACAGAAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGTGACCGGTACTGCTaGTATACATCATCACCCATG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSDRYC*YTSSPM
Trigger: CATGGGTGATGATGTATACCAGCAGTACCGGTCACT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGTCTTCTGCATTCTaGGTATGTGGGAGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLSSAF*VCGSRW
Trigger: CCACCTGCTCCCACATACCCAGAATGCAGAAGACAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCACTAGGGCCACCTaGGCATCTGTGCCACTCCCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFTRAT*ASVPLP
Trigger: AGGGAGTGGCACAGATGCCCAGGTGGCCCTAGTGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCACTGCCTGAAGCCTaGCATGTTTCTCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSLPEA*HVSLYS
Trigger: AGAGTACAGAGAAACATGCCAGGCTTCAGGCAGTGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACACTGCTGTAGAAGCTaGAGGTGGAGGGGCAGGACT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAHCCRS*RWRGRT
Trigger: AGTCCTGCCCCTCCACCTCCAGCTTCTACAGCAGTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGCCATGTTGGGACTaGACAGGTCTAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWPCWD*TGLSCE
Trigger: CTCACAGCTTAGACCTGTCCAGTCCCAACATGGCCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTGTGTTGGCCATGTTaGGACTGGACAGGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLCWPC*DWTGLS
Trigger: GCTTAGACCTGTCCAGTCCCAACATGGCCAACACAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGATATTTCCTGGGGATaGGGGGATGTCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDISWG*GDVCST
Trigger: AGTGCTACAGACATCCCCCCATCCCCAGGAAATATC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCGCACCATCAGTGGATaGGTGGTAGGGATATTTCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRTISG*VVGIFP
Trigger: AGGAAATATCCCTACCACCCATCCACTGATGGTGCG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCGCACCATCAGTGGATaGGTGGTAGGGATATTTCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRTISG*VVGIFP
Trigger: AGGAAATATCCCTACCACCCATCCACTGATGGTGCG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATGGCGCACCATCAGTaGATGGGTGGTAGGGATATT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSMAHHQ*MGGRDI
Trigger: AATATCCCTACCACCCATCCACTGATGGTGCGCCAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTGTCAGAGAACTGTaGTCTGCATGGCGCACCATC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSVREL*SAWRTI
Trigger: GATGGTGCGCCATGCAGACCACAGTTCTCTGACACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTGCGCCCGATGCCCTaGGTGAGACGAGTTGTTGAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALRPMP*VRRVVE
Trigger: TTCAACAACTCGTCTCACCCAGGGCATCGGGCGCAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGGTGTGGCCAGTATTaGCCGTCAGCTGCCTTAGGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAWCGQY*PSAALG
Trigger: CCCTAAGGCAGCTGACGGCCAATACTGGCCACACCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGTAGTGAACATGAATaGTGTGGCCAGTATTGGCCG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGSEHE*CGQYWP
Trigger: CGGCCAATACTGGCCACACCATTCATGTTCACTACC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAACCTCTCCCAAAGCTaGTGGGGTTGGGAGTGTTGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNLSQS*WGWECW
Trigger: CCAACACTCCCAACCCCACCAGCTTTGGGAGAGGTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCCCACTTGGCCTTGTaGGACCCAATTCCTCTGGCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPHLAL*DPIPLA
Trigger: AGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAATCTGCTCCAGAAATaGCCACGGCAGAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNLLQK*PRQNLW
Trigger: CCAGAGATTCTGCCGTGGCCATTTCTGGAGCAGATT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCAAGAAAGGGCTTCGTaGTCCAGAAGGAGCCGTCCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVQERAS*SRRSRP
Trigger: AGGACGGCTCCTTCTGGACCACGAAGCCCTTTCTTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCCAGGAAAGCTGGTTaGAGCTCTTTGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSARKAG*SSLTPS
Trigger: AGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTAGGGCTGCATCCATaGATACTGAGAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLGLHP*ILRARK
Trigger: TTTCCTGGCTCTCAGTATCCATGGATGCAGCCCTAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGCTGCTGTGTGAAGTaGCTGGGAAATACCTTGGCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRCCVK*LGNTLA
Trigger: GGCCAAGGTATTTCCCAGCCACTTCACACAGCAGCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACAGAGAGCTGTAGCTaGTTTTCAGTGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTESCS*FSVRPE
Trigger: CTCTGGCCTCACTGAAAACCAGCTACAGCTCTCTGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGCCCTTCAGCTTGGTaGTCTGTGGCTGCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACPSAW*SVAAPQ
Trigger: CTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGACATAGAAGGCAGCTaGAGCTCCCGGCCACCCAAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQADIEGS*SSRPPK
Trigger: TTTGGGTGGCCGGGAGCTCCAGCTGCCTTCTATGTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCAAGAAGAACTTCTaGGTAGATGTCTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLKKNF*VDVLDV
Trigger: GACATCCAAGACATCTACCCAGAAGTTCTTCTTGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCTGGTCCACATCCATaGGTGATTCCTCCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAAGPHP*VIPPSG
Trigger: TCCGGAGGGAGGAATCACCCATGGATGTGGACCAGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACTAGCACCGCATGCTaGTCATGGGATTCCTCTAGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTSTAC*SWDSSS
Trigger: ACTAGAGGAATCCCATGACCAGCATGCGGTGCTAGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAGCAAGGTGGGTCGTaGACTGCCGTAGGATCTGGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQQGGS*TAVGSG
Trigger: ACCAGATCCTACGGCAGTCCACGACCCACCTTGCTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAACGCTCCAGCTCTTaGCGGAAATATTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKRSSS*RKYLRL
Trigger: CAAGCGCAAATATTTCCGCCAAGAGCTGGAGCGTTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGTCTTCAAACACATaGTCACGACGGACATGCACA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVESSNT*SRRTCT
Trigger: TGTGCATGTCCGTCGTGACCATGTGTTTGAAGACTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTTGCAGTGGGAAGATaGATTGATGGTGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVAVGR*IDGVGD
Trigger: GTCACCTACACCATCAATCCATCTTCCCACTGCAAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGGTTGGGGTTGCAGTaGGAAGATGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSWLGLQ*EDGLMV
Trigger: CACCATCAATCCATCTTCCCACTGCAACCCCAACCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTACCTGTGACAAACTaGAGGAACTTGGCACGGTCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVPVTN*RNLARS
Trigger: TGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGGCAGGCGATCTGTaGACCTGTCATCTCGATGGA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKAGDL*TCHLDG
Trigger: TCCATCGAGATGACAGGTCCACAGATCGCCTGCCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCTTCAGAGCACTCCTaGATAGCCAACAGTAGCATG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPSEHS*IANSSM
Trigger: CATGCTACTGTTGGCTATCCAGGAGTGCTCTGAAGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGAAGATGGGGCAGCTaGGACACACACGGTGAGTTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGRWGS*DTHGEL
Trigger: CAACTCACCGTGTGTGTCCCAGCTGCCCCATCTTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTAAAACACATGGGGTaGGGATCATGGACGGCATGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLKHMG*GSWTAW
Trigger: CCATGCCGTCCATGATCCCCACCCCATGTGTTTTAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGTGATGCTTTGTCCTaGGCTGCAATCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGDALS*AAISNT
Trigger: GGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCTTTAAGCACTGGATaGAGTAAAAACCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPALSTG*SKNHKG
Trigger: TCCCTTGTGGTTTTTACTCCATCCAGTGCTTAAAGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACATACGAGCATCCATaGCATATTCTCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTYEHP*HILHCL
Trigger: CAGACAGTGGAGAATATGTCATGGATGCTCGTATGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGCTTATCCGTTATCTaGAGGACATCTACCAACTCC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCLSVI*RTSTNS
Trigger: GGAGTTGGTAGATGTCCTTCAGATAACGGATAAGCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCAGTGGCAAACTGGTaGGGGTATGGATCCATGGAA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAVANW*GYGSME
Trigger: TTCCATGGATCCATACCCTCACCAGTTTGCCACTGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGTCCACTATGGGATTaGAAAGCTGCCATATCCAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSPLWD*KAAISR
Trigger: CCTGGATATGGCAGCTTTTCAATCCCATAGTGGACT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGTCCACTATGGGATTaGAAAGCTGCCATATCCAGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSPLWD*KAAISR
Trigger: CCTGGATATGGCAGCTTTTCAATCCCATAGTGGACT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCAGTGCATGCAGCATaGCATCTGTCAATCCATTGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFAVHAA*HLSIHC
Trigger: ACAATGGATTGACAGATGTCATGCTGCATGCACTGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCAAACAGAGTGCACTaGATACATTTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSNRVH*IHLGGS
Trigger: GCTCCCTCCCAAATGTATTCAGTGCACTCTGTTTGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCAAACAGAGTGCACTaGATACATTTGGGAGGGAGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSNRVH*IHLGGS
Trigger: GCTCCCTCCCAAATGTATTCAGTGCACTCTGTTTGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCTTCTTCTGCGGCATaGTTAGACCTTGGGGGAGGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAASSAA*LDLGGG
Trigger: TCCTCCCCCAAGGTCTAATCATGCCGCAGAAGAAGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTCTCGCAACAACACTaGGCCCCCAGGGGATTCAAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFSQQH*APRGFN
Trigger: ATTGAATCCCCTGGGGGCTCAGTGTTGTTGCGAGAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATCCTGTTCCCCATCTaGTCTTTTTCCGCCCTGGGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVILFPI*SFSALG
Trigger: ACCCAGGGCGGAAAAAGATCAGATGGGGAACAGGAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTTCCCACACCTGATTaGCTACTTGCTTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLPTPD*LLASES
Trigger: TGATTCTGAAGCAAGTAGTCAATCAGGTGTGGGAAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTACAGGGGTCCTCAATaGTGTGTCTTAAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFYRGPQ*CVLREG
Trigger: CCCTTCTCTTAAGACACATCATTGAGGACCCCTGTA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACCTTTTCCATGGTATaGCGAAGGGTACAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTFSMV*RRVQGS
Trigger: GGACCCCTGTACCCTTCGTCATACCATGGAAAAGGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCCACTTGTAGCTGCTaGGCGAACAACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSTCSC*ANNLFH
Trigger: ATGGAAAAGGTTGTTCGCTCAGCAGCTACAAGTGGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTTGGCCACTTCTGTaGATATGTCTGGATTGCGGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSWPLL*ICLDCG
Trigger: GCCGCAATCCAGACATATTCACAGAAGTGGCCAACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGACTCCTCTGGAGTTaGAGCCTCTCCTTGGGAGGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARLLWS*SLSLGG
Trigger: ACCTCCCAAGGAGAGGCTTCAACTCCAGAGGAGTCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCACTGCAGTCCTCTTTaGTCAGTTCAGACTGGCCCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHCSPL*SVQTGP
Trigger: TGGGCCAGTCTGAACTGATCAAAGAGGACTGCAGTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATACACATCACTGCCTaGAGCCTGGCATGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSIHITA*SLACFS
Trigger: AGAGAAACATGCCAGGCTTCAGGCAGTGATGTGTAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGACAGGTCTAAGCTGTaGGGTACTCTGGCCAGGTCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQADRSKL*GTLARS
Trigger: TGACCTGGCCAGAGTACCTCACAGCTTAGACCTGTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGCACGTCCTCTTGTaGTTCATCCTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQHVLL*FILSTS
Trigger: AGAAGTGGAGAGGATGAATCACAAGAGGACGTGCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGTGAGACGAGTTGTTaGAGAGCCACTGCCCAGTGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGETSC*RATAQC
Trigger: ACACTGGGCAGTGGCTCTTCAACAACTCGTCTCACC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTGGTAGCTGTGCTCTaGTCATGGAAAAAGTCATCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLVAVL*SWKKSS
Trigger: GGATGACTTTTTCCATGATCAGAGCACAGCTACCAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGTTGGTTGCTGTTGTaGGGATTGCAGAGTGCCAAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCWLLL*GLQSAK
Trigger: CTTGGCACTCTGCAATCCTCACAACAGCAACCAACA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCTCTCTGGGGAAAGTaGGGTTATAGTGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSLWGK*GYSGSW
Trigger: CCAGCTCCCACTATAACCTCACTTTCCCCAGAGAGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTCGTCTCAGGGCTTaGGCCTCAGCTGCAATGTCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASRLRA*ASAAMS
Trigger: TGACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGCATCCATGGATACTaGGAGCCAGGAAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCIHGY*EPGKLV
Trigger: AACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCTGAACGCTGGATCTaGAATATATTAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPERWI*NILVLQ
Trigger: CTGCAGGACTAATATATTTCAGATCCAGCGTTCAGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAATACCTTGGCCAATTaGATGAGTGTATCCAAAACG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPNTLAN*MSVSKT
Trigger: CGTTTTGGATACACTCATTCAATTGGCCAAGGTATT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTGACAACATGTTCATaGGCTGCCCCAGTGGAGAGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVTTCS*AAPVER
Trigger: CCTCTCCACTGGGGCAGCTCATGAACATGTTGTCAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCCAAAGGTCGCTTCTaGGATGCCACAATTACCACA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPKGRF*DATITT
Trigger: TGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGAAATATTTGCGCTTaGCATCAAAGTCGAGGACAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGNICA*HQSRGH
Trigger: GTGTCCTCGACTTTGATGTCAAGCGCAAATATTTCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGACTCGATCACCAGGTaGGGTACGGAACAAGGCATA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDSITR*GTEQGI
Trigger: TATGCCTTGTTCCGTACCTCACCTGGTGATCGAGTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATCTGTATATCTGACTaGCTTGCCCAAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPICISD*LAQDVF
Trigger: AAACACATCTTGGGCAAGTCAGTCAGATATACAGAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTTGGAAGTACCTGTaGCAAACTGGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPWKYL*QTGGTW
Trigger: CCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTGGGACACACACGGTaGGTTGGTGGATTTCATTTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLGHTR*VGGFHL
Trigger: TAAATGAAATCCACCAACTCACCGTGTGTGTCCCAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGCAGCAAATCCTTCTaGACACAGAATCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCSKSF*TQNLRS
Trigger: GCTCCTCAGATTCTGTGTTCAGAAGGATTTGCTGCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAATCTTGTCTCGCATTaGATCATTAGCTGTGCACAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITNLVSH*IISCAH
Trigger: ATGTGCACAGCTAATGATTCAATGCGAGACAAGATT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTACAAGGTGATCTGTaGACAGACTGGCAGACAGAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLQGDL*TDWQTD
Trigger: ATCTGTCTGCCAGTCTGTTCACAGATCACCTTGTAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAAGGGACTACAAGGTaGTCTGTGAACAGACTGGCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQGTTR*SVNRLA
Trigger: TGCCAGTCTGTTCACAGATCACCTTGTAGTCCCTTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGTCTATTAAGGCTCTaGAGTCTGCAGGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCLLRL*SLQEPQ
Trigger: CTGAGGCTCCTGCAGACTGCAGAGCCTTAATAGACA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTCCATGTTTTGATCTaGTGCAGTTCCAAGAGAAGT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPFHVLI*CSSKRS
Trigger: ACTTCTCTTGGAACTGCAGCAGATCAAAACATGGAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGTCTGTCCAGCATCTaGCAGTATTCCATCGAAGCG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCLSSI*QYSIEA
Trigger: CGCTTCGATGGAATACTGGCAGATGCTGGACAGACA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGAAGCATTTTCAGTTaGTCTCTTTCTGGCCTATCA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITRSIFS*SLSGLS
Trigger: TGATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTCTCTGCAACATTCTaGAAGTCCAAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVSATF*KSKAIL
Trigger: GAGAATGGCTTTGGACTTGCAGAATGTTGCAGAGAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCATCACATGTCGTATaGCATCTGAGAAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPSHVV*HLRKQG
Trigger: ACCCTGCTTTCTCAGATGGCATACGACATGTGATGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGGGCCATAGTATTCTaGATTGCTGATGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITWAIVF*IADDVF
Trigger: AAACACATCATCAGCAATGCAGAATACTATGGCCCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTGATAAGCAGTGCATaGAGCATGACATCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITLISSA*SMTSVN
Trigger: ATTGACAGATGTCATGCTGCATGCACTGCTTATCAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTGATAAGCAGTGCATaGAGCATGACATCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPLISSA*SMTSVN
Trigger: ATTGACAGATGTCATGCTGCATGCACTGCTTATCAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGATGATGGCAGTCGTTaGATCTGTTTTAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDDGSR*ICFKGG
Trigger: CCCACCCTTAAAACAGATGCAACGACTGCCATCATC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGAGAGGAGGACAGTaGTTTCCCACACCAGGGAAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAERGGQ*FPTPGN
Trigger: GTTCCCTGGTGTGGGAAAGCACTGTCCTCCTCTCTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATCCATACTTCCAGCTaGTCCATCCTGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIHTSS*SILFPI
Trigger: GATGGGGAACAGGATGGAGCAGCTGGAAGTATGGAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACACCATCTAGCCCAATaGCTTCTAATAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHHLAQ*LLISPG
Trigger: CCCAGGGCTTATTAGAAGGCATTGGGCTAGATGGTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTAGGAATTCTCCTGTaGCATCAGGCAAGTCTGAGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLGILL*HQASLS
Trigger: ACTCAGACTTGCCTGATGGCACAGGAGAATTCCTAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACCCCTCCTTCTCCTTaGTTAGTCTCTCTCGAATCA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTPPSP*LVSLES
Trigger: TGATTCGAGAGAGACTAAGCAAGGAGAAGGAGGGGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGTCCATGAGCTGTTaGAGTTGTTGCTGGTTGACT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMSMSC*SCCWLT
Trigger: AGTCAACCAGCAACAACTGCAACAGCTCATGGACAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAACAGTGCCTCCATTaGATGTTCCCTTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQQCLH*MFPCEA
Trigger: GGCTTCACAAGGGAACATGCAATGGAGGCACTGTTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGGCCTGCTCCATGGTaGTGGTGTTCAACAGTGCCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAWPAPW*WCSTVP
Trigger: AGGCACTGTTGAACACCAGCACCATGGAGCAGGCCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCCTCTTCCTCCTCCTaGTTTTCCCGAGCTTTCCGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAASSSS*FSRAFR
Trigger: ACGGAAAGCTCGGGAAAAGCAGGAGGAGGAAGAGGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCCATTACGTTTGATTaGTGTCATGATCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSITFD*CHDQVT
Trigger: TGTGACCTGATCATGACAGCAATCAAACGTAATGGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCATGTCACGATAATCTaGTCCATTACGTTTGATTGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITHVTII*SITFDC
Trigger: GCAATCAAACGTAATGGAGCAGATTATCGTGACATG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTTTCCTCATTAACCTaGACCATTGTAGTGAATTGG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVSSLT*TIVVNW
Trigger: CCAATTCACTACAATGGTGCAGGTTAATGAGGAAAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGACGAAGGGTGGCATaGAAAGTATCTGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRRRVA*KVSGST
Trigger: TGTGGACCCAGATACTTTGCATGCCACCCTTCGTCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCAAATTCAAGATCATaGGGGTACTCTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSNSRS*GYSSVL
Trigger: CAGAACTGAAGAGTACCCGCATGATCTTGAATTTGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTCTGGAGCATGGTATaGAGCCAGAGCATTCAGCAT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLWSMV*SQSIQH
Trigger: ATGCTGAATGCTCTGGCTGCATACCATGCTCCAGAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTAAGTGACCGGTACTaGTGGTATACATCATCACCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVSDRY*WYTSSP
Trigger: GGGTGATGATGTATACCAGCAGTACCGGTCACTTAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGTGGAGGCACCATCTaGAGCAAAGACCTGACTATT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSGGTI*SKDLTI
Trigger: AATAGTCAGGTCTTTGCTGCAGATGGTGCCTCCACT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGTGTCCTTGTCTTCTaGATTCTGGGTATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGVLVF*ILGMWE
Trigger: CTCCCACATACCCAGAATGCAGAAGACAAGGACACC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACATGATATCCCCATCTaGCACCTCTGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHDIPI*HLCLSD
Trigger: GTCACTCAGACAGAGGTGGCAGATGGGGATATCATG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTTCTCGGTTGGCCTaGAAGGTGGAAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSRLA*KVEAWL
Trigger: CAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCTCATCCTCGTTACTaGCACTGCTGTCCTCTTCCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPHPRY*HCCPLP
Trigger: AGGAAGAGGACAGCAGTGGCAGTAACGAGGATGAGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAGAGAACTGTGGTCTaGATGGCGCACCATCAGTGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQRTVV*MAHHQW
Trigger: CCACTGATGGTGCGCCATGCAGACCACAGTTCTCTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGTTGAAGAGCCACTaGCCAGTGTCAGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLLKSH*PVSENC
Trigger: ACAGTTCTCTGACACTGGGCAGTGGCTCTTCAACAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTTGTAGGGGAAGGCTaGTGCTCAGCTGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFVGEG*CSAEGC
Trigger: ACATCCTTCAGCTGAGCAGCAGCCTTCCCCTACAAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTGAGGATTGCAGAGTaGCAAGGGTCTCCTTGGACT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVRIAE*QGSPWT
Trigger: AGTCCAAGGAGACCCTTGGCACTCTGCAATCCTCAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCATCTGAGTTGTTTCTaGTTCCCCACTTGGCCTTGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHLSCF*FPTWPC
Trigger: ACAAGGCCAAGTGGGGAAGCAGAAACAACTCAGATG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGATTCCTCGGGAATCTaGTCCAGAAATGGCCACGGC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQADSSGI*SRNGHG
Trigger: GCCGTGGCCATTTCTGGAGCAGATTCCCGAGGAATC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGCTGCTCAGCTCTCTaGTGTGCCAGTACTTCCTCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACCSAL*CASTSS
Trigger: GGAGGAAGTACTGGCACAGCAGAGAGCTGAGCAGCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCTCACTGCTGCGCTaGAAGATGGAGAGCAGACTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALSLLR*KMESRL
Trigger: CAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTTTGGGTGTTTCAATaGATAGCTCACTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVWVFQ*IAHSHC
Trigger: GCAGTGAGAGTGAGCTATGCATTGAAACACCCAAAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGCCACCGCTTGCATaGTTCTCGGTATGTTTACGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVEPPLA*FSVCLR
Trigger: GCGTAAACATACCGAGAAGCATGCAAGCGGTGGCTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGCCATGTCAAACCTaGTCTGCATTTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQPCQT*SAFCPS
Trigger: TGAAGGGCAAAATGCAGAGCAGGTTTGACATGGCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGCCATGTCAAACCTaGTCTGCATTTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQPCQT*SAFCPS
Trigger: TGAAGGGCAAAATGCAGAGCAGGTTTGACATGGCTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCGTCCAAACTCAGCTaGTCGCTGAGCAGGGGTAAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSKLS*SLSRGN
Trigger: GTTACCCCTGCTCAGCGAGCAGCTGAGTTTGGACGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGCTTGAGGAGATGTaGATAGATGAGGGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARLEEM*IDEGSR
Trigger: CCGGGAGCCCTCATCTATGCACATCTCCTCAAGCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTGCGGTGAGTCTCTaGAAAGCGAAGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSAVSL*KAKELL
Trigger: CAGAAGTTCCTTCGCTTTGCAGAGACTCACCGCACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTGGTTTAACACAGTaGGGTGAGTCTCTGCAAAGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSGLTQ*GESLQS
Trigger: GCTTTGCAGAGACTCACCGCACTGTGTTAAACCAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTTCTTCGGGGGATTTaGGATGCAGCTCACGATAGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFLRGI*DAAHDR
Trigger: CCTATCGTGAGCTGCATCGCAAATCCCCCGAAGAAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAAGAAAGCCGCCAACTaGTTGCGGATGGCTCCTGTC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAKKAAN*LRMAPV
Trigger: GACAGGAGCCATCCGCAAGCAGTTGGCGGCTTTCTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCAGCTCTAACTCCTaGTCAGTGAAGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSSNS*SVKMEM
Trigger: CATTTCCATCTTCACTGAGCAGGAGTTAGAGCTGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATCGAAAGAACGCAATaGTCTCCAGAACCACTGGAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVIERTQ*SPEPLD
Trigger: ATCCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCCTGCTGGTTTCTCTaGATCACTAACCCACTCAGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVACWFL*ITNPLR
Trigger: CCTGAGTGGGTTAGTGATCCAGAGAAACCAGCAGGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACCAAGTTGGCCTGCTaGTTTCTCTGGATCACTAAC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTKLAC*FLWITN
Trigger: GTTAGTGATCCAGAGAAACCAGCAGGCCAACTTGGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCAGTTGCTCTCTTTCTaGCCTATCACATACGAGCAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVQLLSF*PITYEH
Trigger: ATGCTCGTATGTGATAGGCCAGAAAGAGAGCAACTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGTCAAATGCTCTATaGAACTGTACAGATGCCGGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLSNAL*NCTDAG
Trigger: CCCGGCATCTGTACAGTTCCATAGAGCATTTGACAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGGGTATGGATCCATaGAAGGATCAATCATGGCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSEGMDP*KDQSWP
Trigger: AGGCCATGATTGATCCTTCCATGGATCCATACCCTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGGTCTCTGGATCTTTaGCTTGATCACAAACGGACA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGSLDL*LDHKRT
Trigger: TGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGGTCTCTGGATCTTTaGCTTGATCACAAACGGACA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGSLDL*LDHKRT
Trigger: TGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTCAATCCATTGTCCTaGAGTGAGGAGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVNPLS*SEESSD
Trigger: ATCACTGCTCTCCTCACTCCAGGACAATGGATTGAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGCTGGGAGGTAATCTaGAGACAGAAGAACTTTGAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGWEVI*RQKNFE
Trigger: TTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCTCCTCCTCCGCATaGCTGGGAGGTAATCTGGAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFSSSA*LGGNLE
Trigger: CTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACAAATTCCTGGCAGTaGTCATCTGTTGTATTGTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPTNSWQ*SSVVLL
Trigger: CAACAATACAACAGATGACCACTGCCAGGAATTTGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACAAATTCCTGGCAGTaGTCATCTGTTGTATTGTTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITTNSWQ*SSVVLL
Trigger: CAACAATACAACAGATGACCACTGCCAGGAATTTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTTCATCTGTCTCCATaGGAGCCAATGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVHLSP*EPMCHH
Trigger: ATGGTGACACATTGGCTCCCATGGAGACAGATGAAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTGCTCGGCCTAATCTaGAGGAAGCTGATAACAAAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVLGLI*RKLITK
Trigger: CTTTGTTATCAGCTTCCTCCAGATTAGGCCGAGCAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATTCAAGCACCGTGGTaGGATTCACCATCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFIQAPW*DSPSSP
Trigger: TGGAGAAGATGGTGAATCCCACCACGGTGCTTGAAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACTGGGGAAAGTTCTaGACACCTCCAGGCAATTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNWGKF*TPPGNL
Trigger: CAAATTGCCTGGAGGTGTCCAGAACTTTCCCCAGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGATGTGGCATAGAATaGCCAGCATCGATTCAGCCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGCGIE*PASIQP
Trigger: TGGCTGAATCGATGCTGGCCATTCTATGCCACATCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTAAAAGGTACTCTGTaGCCTGCTCCATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLKGTL*PAPWCW
Trigger: CCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGCTCATCAAGAAGGTaGAAGCAGCCTGGCAACATA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSSRR*KQPGNI
Trigger: TATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATCCACTTTGGGGTCTaGACTTCCTTCTGCTCCTTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIHFGV*TSFCSL
Trigger: CAAGGAGCAGAAGGAAGTCCAGACCCCAAAGTGGAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAATCAGGAGCAACACTaGTGTGATCCACTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNQEQH*CDPLWG
Trigger: ACCCCAAAGTGGATCACACCAGTGTTGCTCCTGATT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGTACTTAGTCATCTaGGCTCTCCTTTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRYLVI*ALLFEE
Trigger: CTCCTCAAAAAGGAGAGCCCAGATGACTAAGTACCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTTCTGTCAAGCCCTaGATCAGGATCTCCCCGATT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSSVKP*IRISPI
Trigger: AATCGGGGAGATCCTGATCCAGGGCTTGACAGAAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGACAGAGACGAAGGGTaGCATGCAAAGTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKDRDEG*HAKYLG
Trigger: ACCCAGATACTTTGCATGCCACCCTTCGTCTCTGTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTCTGTGAATATGTCTaGATTGCGGCATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFCEYV*IAACGW
Trigger: CCAGCCGCATGCCGCAATCCAGACATATTCACAGAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGGCTTCAAAGGGGTaGTCTTCACCAGCTGTACAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRASKG*SSPAVQ
Trigger: CTGTACAGCTGGTGAAGACCACCCCTTTGAAGCCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTTATCTGCTTCCTCTaGAGCATGGTATGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFICFL*SMVCSQ
Trigger: CTGGCTGCATACCATGCTCCAGAGGAAGCAGATAAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTTGAAGCCTCTCCTTaGGAGGTCCCAGATGCGGAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVEASP*EVPDAE
Trigger: TTCCGCATCTGGGACCTCCCAAGGAGAGGCTTCAAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGCATTCTGGGTATGTaGGAGCAGGTGGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVCILGM*EQVVQN
Trigger: GTTCTGGACCACCTGCTCCCACATACCCAGAATGCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAAAAGGCTACTGGGCTaGTTCACAATCCGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSKRLLG*FTIRES
Trigger: ACTTTCCCGGATTGTGAACCAGCCCAGTAGCCTTTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGTCCAGGATATTCATaGAATCTTCTCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGPGYS*NLLGWP
Trigger: AGGCCAACCGAGAAGATTCCATGAATATCCTGGACC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAACGGGCGATGATGTaGACGTCATCGTTGCCTACC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAERAMM*TSSLPT
Trigger: GGTAGGCAACGATGACGTCCACATCATCGCCCGTTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTCTGCTTCCCCACTTaGCCTTGTGGGACCCAATTC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFCFPT*PCGTQF
Trigger: GAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCACGGCAGAATCTCTaGTGGAAGAGCTCTCAGAGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPRQNL*WKSSQR
Trigger: CCTCTGAGAGCTCTTCCACCAGAGATTCTGCCGTGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAATCTGCTCCAGAAATaGCCACGGCAGAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKNLLQK*PRQNLW
Trigger: CCAGAGATTCTGCCGTGGCCATTTCTGGAGCAGATT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGGGACGGTTCTCATaGCTACTTGACCCACAGCTC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARGRFS*LLDPQL
Trigger: GAGCTGTGGGTCAAGTAGCCATGAGAACCGTCCCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGAGCCAGGAAAGCTaGTTGGAGCTCTTTGACTCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVESQES*LELFDS
Trigger: GGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTAGGGCTGCATCCATaGATACTGAGAGCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLGLHP*ILRARK
Trigger: TTTCCTGGCTCTCAGTATCCATGGATGCAGCCCTAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATCACTCACCTTCGCTaGAGATTTGCTGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFITHLR*RFAALS
Trigger: ACTAAGGGCAGCAAATCTCCAGCGAAGGTGAGTGAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCCTCAGAACAAGAGTaGGATGTCAACACCTCTACA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSEQE*DVNTST
Trigger: TGTAGAGGTGTTGACATCCCACTCTTGTTCTGAGGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTGCAGTAGTACGTTaGCTGCATCCTCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKAAVVR*LHPLSL
Trigger: AAGGCTTAGAGGATGCAGCCAACGTACTACTGCAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTGTCGTCCCGGAGCTaGATGATGACCTGTAGTACC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVSSRS*MMTCST
Trigger: GGTACTACAGGTCATCATCCAGCTCCGGGACGACAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTCCATCGGAGGCAATaGATTGAGTATCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVFHRRQ*IEYLEH
Trigger: GTGCTCAAGATACTCAATCCATTGCCTCCGATGGAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCCTTCTCCCCCTGTaGGGTTCCATCGGAGGCAAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFLLPL*GSIGGN
Trigger: ATTGCCTCCGATGGAACCCCACAGGGGGAGAAGGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAAACGCTCCAGCTCTTaGCGGAAATATTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFKRSSS*RKYLRL
Trigger: CAAGCGCAAATATTTCCGCCAAGAGCTGGAGCGTTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGTCTTCAAACACATaGTCACGACGGACATGCACA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSESSNT*SRRTCT
Trigger: TGTGCATGTCCGTCGTGACCATGTGTTTGAAGACTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGTTGGGGTTGCAGTaGGAAGATGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWLGLQ*EDGLMV
Trigger: CACCATCAATCCATCTTCCCACTGCAACCCCAACCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAAACTCCAAACTCTTaGACCTCAGTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQTPNS*TSVLKV
Trigger: CACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAAACTCCAAACTCTTaGACCTCAGTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQTPNS*TSVLKV
Trigger: CACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCAACTGCTTGCGGATaGCTCCTGTCATTCTCATCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPTACG*LLSFSS
Trigger: AGATGAGAATGACAGGAGCCATCCGCAAGCAGTTGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAAACTGGAGGAACTTaGCACGGTCAGCTTGATCGA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQTGGT*HGQLDR
Trigger: TCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACATACGAGCATCCATaGCATATTCTCCACTGTCTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTYEHP*HILHCL
Trigger: CAGACAGTGGAGAATATGTCATGGATGCTCGTATGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGATCCCAGACGAGTaGTGTAGTTTGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQIPDE*CSLIFC
Trigger: GCAAAAGATCAAACTACATCACTCGTCTGGGATCTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAAGATACTGTTTGCTaGTTCCTGCAAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQDTVC*FLQGIG
Trigger: TCCAATGCCTTGCAGGAATCAGCAAACAGTATCTTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAAGATACTGTTTGCTaGTTCCTGCAAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQDTVC*FLQGIG
Trigger: TCCAATGCCTTGCAGGAATCAGCAAACAGTATCTTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCAGTGATGGTTCTTaGAATACAAACACAGTCACC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSDGS*NTNTVT
Trigger: GGTGACTGTGTTTGTATTTCAAGAACCATCACTGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGATTGATGGCTTCTaGCAGATGTATTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWIDGF*QMYLGS
Trigger: GGACCCCAAATACATCTGTCAGAAGCCATCAATCCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTACCAACAACCTGCTaGTTAGGCTCAGTTTCATTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVPTTC*LGSVSF
Trigger: AAATGAAACTGAGCCTAATCAGCAGGTTGTTGGTAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACACTCAGACCCAATTaGGAGCCCCACTGGTTTACG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQATLRPN*EPHWFT
Trigger: CGTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTTGCCCTTAGAGTCTaGAGCAGTAGGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFALRV*SSRFIC
Trigger: ACAGATGAACCTACTGCTTCAGACTCTAAGGGCAAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGATGTGAAACCAACTaGACAGATGAAGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGCETN*TDEECQ
Trigger: CTGACATTCTTCATCTGTTCAGTTGGTTTCACATCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAAATTTTTGCAGCATaGGGTGGTAGGGATACTTCC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSEIFAA*GGRDTS
Trigger: GGAAGTATCCCTACCACCTCATGCTGCAAAAATTTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAAATTTTTGCAGCATaGGGTGGTAGGGATACTTCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFEIFAA*GGRDTS
Trigger: GGAAGTATCCCTACCACCTCATGCTGCAAAAATTTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGACAGAGCCCAGTTaGAAGTTTCAAAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWTEPS*KFQKEH
Trigger: ATGCTCTTTTTGAAACTTTCAACTGGGCTCTGTCCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTAAAGGCTGCTTTCTaGGTTACCACAAGGAAGCGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVKAAF*VTTRKR
Trigger: GCGCTTCCTTGTGGTAACTCAGAAAGCAGCCTTTAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGCAACTTCCTCAGGTaGCTCTGCCCTTTGATCCAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSNFLR*LCPLIH
Trigger: ATGGATCAAAGGGCAGAGTCACCTGAGGAAGTTGCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTTCCCACACCTGATTaGCTACTTGCTTCAGAATCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLPTPD*LLASES
Trigger: TGATTCTGAAGCAAGTAGTCAATCAGGTGTGGGAAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTGACTTATCCACTCTaGCACGGTTTTTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLTYPL*HGFCVT
Trigger: AGTGACACAAAAACCGTGTCAGAGTGGATAAGTCAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATTAAGGATGCCACTTaGTTCAACCACCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFIKDAT*FNHPST
Trigger: TGTGCTTGGGTGGTTGAATCAAGTGGCATCCTTAAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAAACCCATTGAAGCCTaGGCTCTGGGTCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSKPIEA*ALGQIQ
Trigger: TTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATACAGGGGTCCTCAATaGTGTGTCTTAAGAGAAGGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKYRGPQ*CVLREG
Trigger: CCCTTCTCTTAAGACACATCATTGAGGACCCCTGTA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCCACTTGTAGCTGCTaGGCGAACAACCTTTTCCAT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSTCSC*ANNLFH
Trigger: ATGGAAAAGGTTGTTCGCTCAGCAGCTACAAGTGGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTTGGCCACTTCTGTaGATATGTCTGGATTGCGGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSWPLL*ICLDCG
Trigger: GCCGCAATCCAGACATATTCACAGAAGTGGCCAACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATACACATCACTGCCTaGAGCCTGGCATGTTTCTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIHITA*SLACFS
Trigger: AGAGAAACATGCCAGGCTTCAGGCAGTGATGTGTAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCACCTCTGTCTGAGTaGCATCATGATCCTCCTCCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPPLSE*HHDPPP
Trigger: AGGAGGAGGATCATGATGTCACTCAGACAGAGGTGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAACCTGCATCTCTTGTaGACTGAGCACCTCAGGCTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQANLHLL*TEHLRL
Trigger: CAGCCTGAGGTGCTCAGTTCACAAGAGATGCAGGTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCAGCACGTCCTCTTGTaGTTCATCCTCTCCACTTCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVQHVLL*FILSTS
Trigger: AGAAGTGGAGAGGATGAATCACAAGAGGACGTGCTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCATAGGCGTCCCATCTaGGAGATTCTGTTCAGTGGA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHRRPI*EILFSG
Trigger: TCCACTGAACAGAATCTCTCAGATGGGACGCCTATG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGTAGCTGCATCAGTTaGAGATGGGGTTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCSCIS*RWGCWV
Trigger: TACCCAACAACCCCATCTTCAACTGATGCAGCTACA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGGGATAACTCCATCTaGGTTGTTTCTGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGDNSI*VVSASP
Trigger: TGGGGAAGCAGAAACAACTCAGATGGAGTTATCCCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTTCTCATGGCTACTTaGCCCACAGCTCTTGCTCGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVLMAT*PTALAR
Trigger: TCGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCTGAACGCTGGATCTaGAATATATTAGTCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPERWI*NILVLQ
Trigger: CTGCAGGACTAATATATTTCAGATCCAGCGTTCAGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGTAGTGGGAGAAATTaGAACAGTAGTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSGRN*NSSGSS
Trigger: ACTGCTACCACTACTGTTTCAATTTCTCCCACTACT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTAGCTGGTTTTCAGTaGGGCCAGAGGACACCATCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVAGFQ*GQRTPS
Trigger: AGATGGTGTCCTCTGGCCTCACTGAAAACCAGCTAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAAATATTTGCGCTTaGCATCAAAGTCGAGGACAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGNICA*HQSRGH
Trigger: GTGTCCTCGACTTTGATGTCAAGCGCAAATATTTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAACATCTCTCGAGAGATaGTCATATACCACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKTSLER*SYTTPA
Trigger: TGCGGGAGTGGTATATGATCATCTCTCGAGAGATGT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGACTCGATCACCAGGTaGGGTACGGAACAAGGCATA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQADSITR*GTEQGI
Trigger: TATGCCTTGTTCCGTACCTCACCTGGTGATCGAGTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGCAGCAAATCCTTCTaGACACAGAATCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCSKSF*TQNLRS
Trigger: GCTCCTCAGATTCTGTGTTCAGAAGGATTTGCTGCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGAGTGCTCTTTATTTaGAACCTCCACAACACAGAC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRVLFI*NLHNTD
Trigger: GTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACTGCTCATCTCTCCTaGCTGCAGAAACTGACTCTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTAHLS*LQKLTL
Trigger: CAGAGTCAGTTTCTGCAGTCAGGAGAGATGAGCAGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCATGTTTTGATCTGCTaGAGTTCCAAGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHVLIC*SSKRSC
Trigger: GCAACTTCTCTTGGAACTGCAGCAGATCAAAACATG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATGGAACTGTACAGATaGCGGGAAAAGCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSMELYR*REKLYS
Trigger: TGAGTACAGCTTTTCCCGGCATCTGTACAGTTCCAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTCTCTGCAACATTCTaGAAGTCCAAAGCCATTCTC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVSATF*KSKAIL
Trigger: GAGAATGGCTTTGGACTTGCAGAATGTTGCAGAGAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTAAATAACAGCATCTaGTTATCCTTAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITVNNSI*LSLGML
Trigger: CAGCATTCCTAAGGATAAGCAGATGCTGTTATTTAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGCATTCAAACAGAGTaGACTGAATACATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGIQTE*TEYIWE
Trigger: CTCCCAAATGTATTCAGTGCACTCTGTTTGAATGCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTGTCAATATGGATTTaGAGACACCTGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVSIWI*RHLQQP
Trigger: AGGCTGTTGCAGGTGTCTGCAAATCCATATTGACAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTGTCAATATGGATTTaGAGACACCTGCAACAGCCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVSIWI*RHLQQP
Trigger: AGGCTGTTGCAGGTGTCTGCAAATCCATATTGACAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCACCATCTAGCCCAATaGCTTCTAATAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHHLAQ*LLISPG
Trigger: CCCAGGGCTTATTAGAAGGCATTGGGCTAGATGGTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAATTCTGGCAGCCATTaGTGGTGTGATTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITNSGSH*WCDFRF
Trigger: AAATCTAAAATCACACCAGCAATGGCTGCCAGAATT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAACAAAGGCTTGATTTaGTTAATTCTGGCAGCCATT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPNKGLI*LILAAI
Trigger: AATGGCTGCCAGAATTAAGCAAATCAAGCCTTTGTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAACAAAGGCTTGATTTaGTTAATTCTGGCAGCCATT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITNKGLI*LILAAI
Trigger: AATGGCTGCCAGAATTAAGCAAATCAAGCCTTTGTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGTTGCTGTTGGATTaGAGGTACTTAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLLLLD*RYLVIW
Trigger: CCAGATGACTAAGTACCTGCAATCCAACAGCAACAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTATCTTCTTCGGCCTaGAGTGAATCGCACGCTTGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVSSSA*SESHAC
Trigger: ACAAGCGTGCGATTCACTGCAGGCCGAAGAAGATAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGTACTCTTCAGTTCTaGAAACATCATGGCATATTT +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITGTLQF*KHHGIF
Trigger: AAATATGCCATGATGTTTGCAGAACTGAAGAGTACC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCATCACCCATGTCTTaGAGGAGCTGGCCAACCTCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSPMS*RSWPTS
Trigger: AGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGGAAAAACCTGACTaGGTATCAAAGTCACTGCTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMEKPD*VSKSLL
Trigger: GAGCAGTGACTTTGATACGCAGTCAGGTTTTTCCAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGGTTTGCTGCCCTTaGCTTTCTGTTTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKVCCP*LSVCLP
Trigger: AGGAAGGCAAACAGAAAGGCAAGGGCAGCAAACCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGACCTCACCAACTCTaGCAGAAGACGAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGPHQL*QKTKDS
Trigger: ACTATCCTTCGTCTTCTGGCAGAGTTGGTGAGGTCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTGTCCTTGTCTTCTaGATTCTGGGTATGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGVLVF*ILGMWE
Trigger: CTCCCACATACCCAGAATGCAGAAGACAAGGACACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCATGATATCCCCATCTaGCACCTCTGTCTGAGTGAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHDIPI*HLCLSD
Trigger: GTCACTCAGACAGAGGTGGCAGATGGGGATATCATG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGCTCATTCTCAACCTaGATCTCTTGTGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSFST*ISCELS
Trigger: GCTCAGTTCACAAGAGATGCAGGTTGAGAATGAGCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTTGTAGGGGAAGGCTaGTGCTCAGCTGAAGGATGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFVGEG*CSAEGC
Trigger: ACATCCTTCAGCTGAGCAGCAGCCTTCCCCTACAAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAACACAGTCATGCATaGTCTCAGCATCGAGAACTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKHSHA*SQHREL
Trigger: AAGTTCTCGATGCTGAGAGCATGCATGACTGTGTTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCAGCCAGTTGTTTCCTaGGCTTCTCTCGCCTTTCTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVQPVVS*ASLAFL
Trigger: AAGAAAGGCGAGAGAAGCGCAGGAAACAACTGGCTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAAGGTGCCACCTCTCTaGACAGCAAGGCGAGTATAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAKVPPL*TARRVY
Trigger: GTATACTCGCCTTGCTGTGCAGAGAGGTGGCACCTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGTATCTACATTACTaGCAGAAGGCCTGTTATGGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSEYLHY*QKACYG
Trigger: GCCATAACAGGCCTTCTGGCAGTAATGTAGATACTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGCCACCGCTTGCATaGTTCTCGGTATGTTTACGC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAEPPLA*FSVCLR
Trigger: GCGTAAACATACCGAGAAGCATGCAAGCGGTGGCTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGTGGAGCCACCGCTTaGATGCTTCTCGGTATGTTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGGATA*MLLGMF
Trigger: AAACATACCGAGAAGCATGCAAGCGGTGGCTCCACC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTATCCAAAACGTGTCTaGAGACAACAGGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSYPKRV*RQQEQL
Trigger: AAGCTGCTCCTGTTGTCTGCAGACACGTTTTGGATA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGCTACAGGCCTTATTaGCCCTTTCCCGATCACTCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGYRPY*PFPDHS
Trigger: AGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGAAGTCTGTGCAAATaGCACTGCTGGAGGACTGTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRSLCK*HCWRTV
Trigger: CACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGTCAAACCTGCTCTaGATTTTGCCCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMSNLL*ILPFSL
Trigger: CAAGCTGAAGGGCAAAATGCAGAGCAGGTTTGACAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGCCATGTCAAACCTaGTCTGCATTTTGCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQPCQT*SAFCPS
Trigger: TGAAGGGCAAAATGCAGAGCAGGTTTGACATGGCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCTAGCCTGCCTGTCTaGTTGGCTTTCTTGTTAGCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPSLPV*LAFLLA
Trigger: GGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTGCGGTGAGTCTCTaGAAAGCGAAGGAACTTCTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSAVSL*KAKELL
Trigger: CAGAAGTTCCTTCGCTTTGCAGAGACTCACCGCACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGTGGGTCGTGGACTaGCGTAGGATCTGGTTTAAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARWVVD*RRIWFN
Trigger: GTTAAACCAGATCCTACGGCAGTCCACGACCCACCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGGTCACGACGGACATaGACAGCCATGTCTTCTTTC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVWSRRT*TAMSSF
Trigger: GAAAGAAGACATGGCTGTGCATGTCCGTCGTGACCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGCAGCTCTAACTCCTaGTCAGTGAAGATGGAAATG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSSNS*SVKMEM
Trigger: CATTTCCATCTTCACTGAGCAGGAGTTAGAGCTGCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATCGAAAGAACGCAATaGTCTCCAGAACCACTGGAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSIERTQ*SPEPLD
Trigger: ATCCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTGAGTTATGAAGAGTaGTCTTTATTTGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPVSYEE*SLFETS
Trigger: GGAGGTTTCAAATAAAGAGCACTCTTCATAACTCAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAATTCCTGGTGAACTaGTCATCTCTCCTGACTGCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQFLVN*SSLLTA
Trigger: TGCAGTCAGGAGAGATGAGCAGTTCACCAGGAATTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTTTGTACAACCTGCTaGAGTTTGTTCCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFCTTC*SLFPLS
Trigger: GCTCAAGGGGAACAAACTGCAGCAGGTTGTACAAAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTTTGTACAACCTGCTaGAGTTTGTTCCCCTTGAGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFCTTC*SLFPLS
Trigger: GCTCAAGGGGAACAAACTGCAGCAGGTTGTACAAAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGTTGCTCTCTTTCTaGCCTATCACATACGAGCAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQLLSF*PITYEH
Trigger: ATGCTCGTATGTGATAGGCCAGAAAGAGAGCAACTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATATTGCATGCAGTCTaGCCTGAACTGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKILHAV*PELPAI
Trigger: GATTGCAGGCAGTTCAGGCCAGACTGCATGCAATAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGATCAATCATGGCCTaGATACAGTTCCTTACAAGC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGSIMA*IQFLTS
Trigger: GCTTGTAAGGAACTGTATCCAGGCCATGATTGATCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGGAAGGATCAATCATaGCCTGGATACAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVWKDQS*PGYSSL
Trigger: TAAGGAACTGTATCCAGGCCATGATTGATCCTTCCA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTAGTATTGGGTCTCTaGATCTTTGGCTTGATCACA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVVLGL*IFGLIT
Trigger: TGTGATCAAGCCAAAGATCCAGAGACCCAATACTAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAGAAAGCAGGGTCTTaGATGGCCTTCTTGAGGAAA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKEKAGS*MAFLRK
Trigger: TTTCCTCAAGAAGGCCATCCAAGACCCTGCTTTCTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCTGGGAGGTAATCTaGAGACAGAAGAACTTTGAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGWEVI*RQKNFE
Trigger: TTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCAGTTTCATTTTGCTaGGTAGAATTAAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: PLEQGDALSWAAISNTITSVSFC*VELKLC
Trigger: GCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGACAGGCAGCAGATGTaGGAAAGTCAATGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDRQQM*ESQWAD
Trigger: ATCTGCCCATTGACTTTCCCACATCTGCTGCCTGTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGACAGTGTCAATATaGATTTGCAGACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVTVSI*ICRHLQ
Trigger: TTGCAGGTGTCTGCAAATCCATATTGACACTGTCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCTCTTGAAGGACTTTaGGTTCATGTGACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPLEGL*VHVTVS
Trigger: TGACACTGTCACATGAACCCAAAGTCCTTCAAGAGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCTGCATATCTGCCTaGCCAAATTCACACCCAGAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFCISA*PNSHPD
Trigger: ATCTGGGTGTGAATTTGGCCAGGCAGATATGCAGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTCCTCGGAGGATGTaGCATAGAATGGCCAGCATC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASPRRM*HRMASI
Trigger: GATGCTGGCCATTCTATGCCACATCCTCCGAGGAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATGATTGGAGGAGGGTaGGTTAAAAGGTACTCTGTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSMIGGG*VKRYSV
Trigger: CACAGAGTACCTTTTAACCCACCCTCCTCCAATCAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATTGCTCTCATCATCTaGTCCTCTTCAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSIALII*SSSDML
Trigger: CAGCATGTCTGAAGAGGACCAGATGATGAGAGCAAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGCCCTTTGATCCATTaGAATATCCTGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCPLIH*NILSQR
Trigger: TCTCTGGGACAGGATATTCCAATGGATCAAAGGGCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAAGGTGGAAGCAGCCTaGCAACATAGTATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSKVEAA*QHSICE
Trigger: TTCACAGATACTATGTTGCCAGGCTGCTTCCACCTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAACAACCTTTTCCATaGTATGACGAAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSEQPFP*YDEGYR
Trigger: CCTGTACCCTTCGTCATACCATGGAAAAGGTTGTTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTCTGTGAATATGTCTaGATTGCGGCATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFCEYV*IAACGW
Trigger: CCAGCCGCATGCCGCAATCCAGACATATTCACAGAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCTTCCTCTGGAGCATaGTATGCAGCCAGAGCATTC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAASSGA*YAARAF
Trigger: GAATGCTCTGGCTGCATACCATGCTCCAGAGGAAGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTGACCGGTACTGCTaGTATACATCATCACCCATG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSDRYC*YTSSPM
Trigger: CATGGGTGATGATGTATACCAGCAGTACCGGTCACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGCATTCTGGGTATGTaGGAGCAGGTGGTCCAGAAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACILGM*EQVVQN
Trigger: GTTCTGGACCACCTGCTCCCACATACCCAGAATGCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCACTGCCTGAAGCCTaGCATGTTTCTCTGTACTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSLPEA*HVSLYS
Trigger: AGAGTACAGAGAAACATGCCAGGCTTCAGGCAGTGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGGCCATGTTGGGACTaGACAGGTCTAAGCTGTGAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAWPCWD*TGLSCE
Trigger: CTCACAGCTTAGACCTGTCCAGTCCCAACATGGCCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTGTGTTGGCCATGTTaGGACTGGACAGGTCTAAGC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALCWPC*DWTGLS
Trigger: GCTTAGACCTGTCCAGTCCCAACATGGCCAACACAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGGAATCTTCTCGGTTaGCCTGCAAGGTGGAAGCTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVWNLLG*PARWKL
Trigger: AAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGATATTTCCTGGGGATaGGGGGATGTCTGTAGCACT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDISWG*GDVCST
Trigger: AGTGCTACAGACATCCCCCCATCCCCAGGAAATATC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGCACCATCAGTGGATaGGTGGTAGGGATATTTCCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRTISG*VVGIFP
Trigger: AGGAAATATCCCTACCACCCATCCACTGATGGTGCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATCTGCTCCAGAAATaGCCACGGCAGAATCTCTGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNLLQK*PRQNLW
Trigger: CCAGAGATTCTGCCGTGGCCATTTCTGGAGCAGATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCCAGGAAAGCTGGTTaGAGCTCTTTGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVARKAG*SSLTPS
Trigger: AGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGCAAATGCCACTGCTaGAGGACTGTGAGGAGCATG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACKCHC*RTVRSM
Trigger: CATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATCACTCACCTTCGCTaGAGATTTGCTGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKITHLR*RFAALS
Trigger: ACTAAGGGCAGCAAATCTCCAGCGAAGGTGAGTGAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACAGAGAGCTGTAGCTaGTTTTCAGTGAGGCCAGAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTESCS*FSVRPE
Trigger: CTCTGGCCTCACTGAAAACCAGCTACAGCTCTCTGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCCTCAGAACAAGAGTaGGATGTCAACACCTCTACA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSEQE*DVNTST
Trigger: TGTAGAGGTGTTGACATCCCACTCTTGTTCTGAGGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTTTGCCCTTCAGCTTaGTGGTCTGTGGCTGCTCCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFCPSA*WSVAAP
Trigger: AGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGTATCTTGAGCACTaGGAGATGGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVEYLEH*EMAGPH
Trigger: ATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCCATCGGAGGCAATaGATTGAGTATCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFHRRQ*IEYLEH
Trigger: GTGCTCAAGATACTCAATCCATTGCCTCCGATGGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAACGCTCCAGCTCTTaGCGGAAATATTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKRSSS*RKYLRL
Trigger: CAAGCGCAAATATTTCCGCCAAGAGCTGGAGCGTTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAGTCTTCAAACACATaGTCACGACGGACATGCACA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKESSNT*SRRTCT
Trigger: TGTGCATGTCCGTCGTGACCATGTGTTTGAAGACTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGTCATAGCCTAGTGTaGAGACATCATTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGHSLV*RHHFPA
Trigger: TGCTGGAAAATGATGTCTCCACACTAGGCTATGACC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCTTCAGAGCACTCCTaGATAGCCAACAGTAGCATG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPSEHS*IANSSM
Trigger: CATGCTACTGTTGGCTATCCAGGAGTGCTCTGAAGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCACACGGTGAGTTGGTaGATTTCATTTATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPHTVSW*ISFIGF
Trigger: AAAACCAATAAATGAAATCCACCAACTCACCGTGTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTGATGCTTTGTCCTaGGCTGCAATCTCTAACACC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGDALS*AAISNT
Trigger: GGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATACATATAGGAGATTaGGGACTGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIHIGD*GLPAPL
Trigger: AAGTGGTGCTGGCAGTCCTCAATCTCCTATATGTAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGATCCCAGACGAGTaGTGTAGTTTGATCTTTTGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQIPDE*CSLIFC
Trigger: GCAAAAGATCAAACTACATCACTCGTCTGGGATCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCGCCAAGAAACTTTATaGCCTTCAATAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRQETL*PSIRLP
Trigger: TGGAAGCCTTATTGAAGGTCATAAAGTTTCTTGGCG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTGGATCTTTGGCTTaGTCACAAACGGACATTCTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSGSLA*SQTDIL
Trigger: AAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGGATCTTTGGCTTaGTCACAAACGGACATTCTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSGSLA*SQTDIL
Trigger: AAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATGTCGTATGCCATCTaGGAAAGCAGGGTCTTGGAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVMSYAI*ESRVLD
Trigger: ATCCAAGACCCTGCTTTCTCAGATGGCATACGACAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCAGTGCATGCAGCATaGCATCTGTCAATCCATTGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAVHAA*HLSIHC
Trigger: ACAATGGATTGACAGATGTCATGCTGCATGCACTGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGGATTGATGGCTTCTaGCAGATGTATTTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVWIDGF*QMYLGS
Trigger: GGACCCCAAATACATCTGTCAGAAGCCATCAATCCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGCAACAGTCCTTTCTaGTTCACAAATTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGNSPF*FTNSWQ
Trigger: CTGCCAGGAATTTGTGAATCAGAAAGGACTGTTGCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTTGCCCTTAGAGTCTaGAGCAGTAGGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFALRV*SSRFIC
Trigger: ACAGATGAACCTACTGCTTCAGACTCTAAGGGCAAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGATGTGAAACCAACTaGACAGATGAAGAATGTCAG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGCETN*TDEECQ
Trigger: CTGACATTCTTCATCTGTTCAGTTGGTTTCACATCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGGACAGAGCCCAGTTaGAAGTTTCAAAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSWTEPS*KFQKEH
Trigger: ATGCTCTTTTTGAAACTTTCAACTGGGCTCTGTCCA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTGACTCTGCCCTTTaGTCCATTGGAATATCCTGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGDSAL*SIGISC
Trigger: ACAGGATATTCCAATGGATCAAAGGGCAGAGTCACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCAGCTTCCCACACCTaGTTGACTACTTGCTTCAGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAAASHT*LTTCFR
Trigger: TCTGAAGCAAGTAGTCAATCAGGTGTGGGAAGCTGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATTAAGGATGCCACTTaGTTCAACCACCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIKDAT*FNHPST
Trigger: TGTGCTTGGGTGGTTGAATCAAGTGGCATCCTTAAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAACCCATTGAAGCCTaGGCTCTGGGTCAAATTCAA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKPIEA*ALGQIQ
Trigger: TTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCAGGAATTCCAGGTaGTTGACAATGGACACTTTA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLRNSR*LTMDTL
Trigger: TAAAGTGTCCATTGTCAATCACCTGGAATTCCTGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGCATCCATGGATACTaGGAGCCAGGAAAGCTGGTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACIHGY*EPGKLV
Trigger: AACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTTGGCCAATTGAATaGGTGTATCCAAAACGTGTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPWPIE*VYPKRV
Trigger: GACACGTTTTGGATACACTCATTCAATTGGCCAAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCTTGCCTTTCCGGCTaGCATTCATGTTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSCLSG*HSCCPV
Trigger: AACTGGACAACATGAATGTCAGCCGGAAAGGCAAGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGTAGTGGGAGAAATTaGAACAGTAGTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSSGRN*NSSGSS
Trigger: ACTGCTACCACTACTGTTTCAATTTCTCCCACTACT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCCAAAGGTCGCTTCTaGGATGCCACAATTACCACA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPKGRF*DATITT
Trigger: TGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGAAATATTTGCGCTTaGCATCAAAGTCGAGGACAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGNICA*HQSRGH
Trigger: GTGTCCTCGACTTTGATGTCAAGCGCAAATATTTCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACATCTCTCGAGAGATaGTCATATACCACTCCCGCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTSLER*SYTTPA
Trigger: TGCGGGAGTGGTATATGATCATCTCTCGAGAGATGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATCTGTATATCTGACTaGCTTGCCCAAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVICISD*LAQDVF
Trigger: AAACACATCTTGGGCAAGTCAGTCAGATATACAGAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCTTGGAAGTACCTGTaGCAAACTGGAGGAACTTGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPWKYL*QTGGTW
Trigger: CCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGCAGCAAATCCTTCTaGACACAGAATCTGAGGAGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVCSKSF*TQNLRS
Trigger: GCTCCTCAGATTCTGTGTTCAGAAGGATTTGCTGCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTCCATTGTGAAAAGTaGGTTATGAAGAGTGCTCTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLHCEK*VMKSAL
Trigger: AAGAGCACTCTTCATAACTCACTTTTCACAATGGAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACTGCTCATCTCTCCTaGCTGCAGAAACTGACTCTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQATAHLS*LQKLTL
Trigger: CAGAGTCAGTTTCTGCAGTCAGGAGAGATGAGCAGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTCTATTAAGGCTCTaGAGTCTGCAGGAGCCTCAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACLLRL*SLQEPQ
Trigger: CTGAGGCTCCTGCAGACTGCAGAGCCTTAATAGACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGTTCCAAGAGAAGTTaGTCATCATTACAAACTTTG +
Preference number: 4 (lower is better)
Translates to: EQGDALSWAAISNTITIPSSKRS*SSLQTL
Trigger: CAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGAAGCATTTTCAGTTaGTCTCTTTCTGGCCTATCA +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRSIFS*SLSGLS
Trigger: TGATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACTGCCAGCACCACTTaGATATCAGAGGAAGCCAAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTASTT*ISEEAN
Trigger: ATTGGCTTCCTCTGATATGCAAGTGGTGCTGGCAGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCATCACATGTCGTATaGCATCTGAGAAAGCAGGGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPSHVV*HLRKQG
Trigger: ACCCTGCTTTCTCAGATGGCATACGACATGTGATGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGATAAGCAGTGCATaGAGCATGACATCTGTCAAT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLISSA*SMTSVN
Trigger: ATTGACAGATGTCATGCTGCATGCACTGCTTATCAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGATGATGGCAGTCGTTaGATCTGTTTTAAGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDDGSR*ICFKGG
Trigger: CCCACCCTTAAAACAGATGCAACGACTGCCATCATC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTAGAATTAAAGCTCTaGATGGCCTGTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVELKL*MACTSS
Trigger: AGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTAGAATTAAAGCTCTaGATGGCCTGTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVELKL*MACTSS
Trigger: AGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATCAGCAACATTGCCTaGGCAAGCCAGTTCTCGCAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAISNIA*ASQFSQ
Trigger: TTGCGAGAACTGGCTTGCGCAGGCAATGTTGCTGAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTTGGAACCAGTTTCTaGATATCTGCCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFGTSF*ISAWPN
Trigger: ATTTGGCCAGGCAGATATGCAGAAACTGGTTCCAAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTTGGAACCAGTTTCTaGATATCTGCCTGGCCAAAT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFGTSF*ISAWPN
Trigger: ATTTGGCCAGGCAGATATGCAGAAACTGGTTCCAAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATCCATACTTCCAGCTaGTCCATCCTGTTCCCCATC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAIHTSS*SILFPI
Trigger: GATGGGGAACAGGATGGAGCAGCTGGAAGTATGGAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACACCATCTAGCCCAATaGCTTCTAATAAGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAHHLAQ*LLISPG
Trigger: CCCAGGGCTTATTAGAAGGCATTGGGCTAGATGGTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACACAAGGAAGCGCAGTaGACTGAACTGGGGAAAGTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAHKEAQ*TELGKV
Trigger: AACTTTCCCCAGTTCAGTGCACTGCGCTTCCTTGTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACCCCTCCTTCTCCTTaGTTAGTCTCTCTCGAATCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTPPSP*LVSLES
Trigger: TGATTCGAGAGAGACTAAGCAAGGAGAAGGAGGGGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAACAGTGCCTCCATTaGATGTTCCCTTGTGAAGCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQQCLH*MFPCEA
Trigger: GGCTTCACAAGGGAACATGCAATGGAGGCACTGTTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGAGACATAGCAATTaGTCTCATCATCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQRHSN*SHHLVL
Trigger: GAGGACCAGATGATGAGAGCAATTGCTATGTCTCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGTTGCTGTTGGATTaGAGGTACTTAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLLLLD*RYLVIW
Trigger: CCAGATGACTAAGTACCTGCAATCCAACAGCAACAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTATCTTCTTCGGCCTaGAGTGAATCGCACGCTTGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVSSSA*SESHAC
Trigger: ACAAGCGTGCGATTCACTGCAGGCCGAAGAAGATAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTTTCCTCATTAACCTaGACCATTGTAGTGAATTGG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVSSLT*TIVVNW
Trigger: CCAATTCACTACAATGGTGCAGGTTAATGAGGAAAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGACGAAGGGTGGCATaGAAAGTATCTGGGTCCACA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARRRVA*KVSGST
Trigger: TGTGGACCCAGATACTTTGCATGCCACCCTTCGTCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTGGAGGCACCATCTaGAGCAAAGACCTGACTATT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSGGTI*SKDLTI
Trigger: AATAGTCAGGTCTTTGCTGCAGATGGTGCCTCCACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAGGTTTGCTGCCCTTaGCTTTCTGTTTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKVCCP*LSVCLP
Trigger: AGGAAGGCAAACAGAAAGGCAAGGGCAGCAAACCTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGACCTCACCAACTCTaGCAGAAGACGAAGGATAGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGPHQL*QKTKDS
Trigger: ACTATCCTTCGTCTTCTGGCAGAGTTGGTGAGGTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGTTCATGCCATTGTaGTGGGTCTTCGCTGTGGCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALFMPL*WVFAVA
Trigger: TGCCACAGCGAAGACCCAGCACAATGGCATGAACAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTGTTGAAGAGCCACTaGCCAGTGTCAGAGAACTGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLLKSH*PVSENC
Trigger: ACAGTTCTCTGACACTGGGCAGTGGCTCTTCAACAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCAGCTCTCTGCTGTaGCAGTACTTCCTCCTGAAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALSSLL*QYFLLN
Trigger: ATTCAGGAGGAAGTACTGGCACAGCAGAGAGCTGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTTTGGGTGTTTCAATaGATAGCTCACTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVWVFQ*IAHSHC
Trigger: GCAGTGAGAGTGAGCTATGCATTGAAACACCCAAAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATATCCAAAACGTGTCTaGAGACAACAGGAGCAGCTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKYPKRV*RQQEQL
Trigger: AAGCTGCTCCTGTTGTCTGCAGACACGTTTTGGATA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGGTCGCTTCTGAGATaGCACAATTACCACATTCTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRSLLR*HNYHIL
Trigger: GAGAATGTGGTAATTGTGGCATCTCAGAAGCGACCT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGTTTTGTACAACCTaGTGCAGTTTGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMFCTT*CSLFPL
Trigger: CAAGGGGAACAAACTGCAGCAGGTTGTACAAAACAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATCCTGTTCCCCATCTaGCTTCTCATCCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVILFPI*LLILWN
Trigger: GTTCCAAAGGATGAGAAGGCAGATGGGGAACAGGAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGATCAATCATGGCCTaGATACAGTTCCTTACAAGC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGSIMA*IQFLTS
Trigger: GCTTGTAAGGAACTGTATCCAGGCCATGATTGATCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGGAAGGATCAATCATaGCCTGGATACAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFWKDQS*PGYSSL
Trigger: TAAGGAACTGTATCCAGGCCATGATTGATCCTTCCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTGACAAATGTTATCTaGTCCTGTTCATCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVTNVI*SCSSPR
Trigger: TCTTGGCGATGAACAGGACCAGATAACATTTGTCAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTGACAAATGTTATCTaGTCCTGTTCATCGCCAAGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVTNVI*SCSSPR
Trigger: TCTTGGCGATGAACAGGACCAGATAACATTTGTCAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTAGTATTGGGTCTCTaGATCTTTGGCTTGATCACA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVVLGL*IFGLIT
Trigger: TGTGATCAAGCCAAAGATCCAGAGACCCAATACTAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCGTTGTGGAATACACTaGACTCCATCCATATCAGTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRCGIH*TPSISV
Trigger: AACTGATATGGATGGAGTCCAGTGTATTCCACAACG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGACAGATGTATTTaGGGTCCCTTCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSDRCI*GPFQDY
Trigger: GTAATCTTGGAAGGGACCCCAAATACATCTGTCAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACAAATTCCTGGCAGTaGTCATCTGTTGTATTGTTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTNSWQ*SSVVLL
Trigger: CAACAATACAACAGATGACCACTGCCAGGAATTTGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTGACAGTGTCAATATaGATTTGCAGACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVTVSI*ICRHLQ
Trigger: TTGCAGGTGTCTGCAAATCCATATTGACACTGTCAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTGACAGTGTCAATATaGATTTGCAGACACCTGCAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVTVSI*ICRHLQ
Trigger: TTGCAGGTGTCTGCAAATCCATATTGACACTGTCAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTCTTGAAGGACTTTaGGTTCATGTGACAGTGTCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPLEGL*VHVTVS
Trigger: TGACACTGTCACATGAACCCAAAGTCCTTCAAGAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACTGGTTTACGGAGATaGAACGAATTTCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTGLRR*NEFHSV
Trigger: GACAGAGTGAAATTCGTTCCATCTCCGTAAACCAGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCTTCTAATAAGCCCTaGGTAGAAGCATCCATACTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPSNKP*VEASIL
Trigger: AAGTATGGATGCTTCTACCCAGGGCTTATTAGAAGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCTTCTAATAAGCCCTaGGTAGAAGCATCCATACTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPSNKP*VEASIL
Trigger: AAGTATGGATGCTTCTACCCAGGGCTTATTAGAAGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTGGCAGCCATTGCTaGTGTGATTTTAGATTTGCC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSGSHC*CDFRFA
Trigger: GGCAAATCTAAAATCACACCAGCAATGGCTGCCAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTGCTCGGCCTAATCTaGAGGAAGCTGATAACAAAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVLGLI*RKLITK
Trigger: CTTTGTTATCAGCTTCCTCCAGATTAGGCCGAGCAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTAAAAGGTACTCTGTaGCCTGCTCCATGGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALKGTL*PAPWCW
Trigger: CCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATTGCTCTCATCATCTaGTCCTCTTCAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIALII*SSSDML
Trigger: CAGCATGTCTGAAGAGGACCAGATGATGAGAGCAAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAACGGGTCAGCATCCTaGAACTTCTCTAGACATTTA +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNGSAS*NFSRHL
Trigger: TAAATGTCTAGAGAAGTTCCAGGATGCTGACCCGTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACGGGTCAGCATCCTaGAACTTCTCTAGACATTTA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNGSAS*NFSRHL
Trigger: TAAATGTCTAGAGAAGTTCCAGGATGCTGACCCGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGGTGGAAGCAGCCTaGCAACATAGTATCTGTGAA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKVEAA*QHSICE
Trigger: TTCACAGATACTATGTTGCCAGGCTGCTTCCACCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACGGTATACTGTGTCTaGCAGCTCATCAAGAAGGTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTVYCV*QLIKKV
Trigger: CACCTTCTTGATGAGCTGCCAGACACAGTATACCGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATCAGGAGCAACACTaGTGTGATCCACTTTGGGGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNQEQH*CDPLWG
Trigger: ACCCCAAAGTGGATCACACCAGTGTTGCTCCTGATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACCATTGTAGTGAATTaGACCGTGTATCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTIVVN*TVYLLR
Trigger: CCGAAGAAGATACACGGTCCAATTCACTACAATGGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACCATTGTAGTGAATTaGACCGTGTATCTTCTTCGG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTIVVN*TVYLLR
Trigger: CCGAAGAAGATACACGGTCCAATTCACTACAATGGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGACAGAGACGAAGGGTaGCATGCAAAGTATCTGGGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQADRDEG*HAKYLG
Trigger: ACCCAGATACTTTGCATGCCACCCTTCGTCTCTGTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAACAACCTTTTCCATaGTATGACGAAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKEQPFP*YDEGYR
Trigger: CCTGTACCCTTCGTCATACCATGGAAAAGGTTGTTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCTGTGAATATGTCTaGATTGCGGCATGCGGCTGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFCEYV*IAACGW
Trigger: CCAGCCGCATGCCGCAATCCAGACATATTCACAGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTTATCTGCTTCCTCTaGAGCATGGTATGCAGCCAG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFICFL*SMVCSQ
Trigger: CTGGCTGCATACCATGCTCCAGAGGAAGCAGATAAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGTCTTGCAGGAGCTaGCCAACCTCTTGGGTCATA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAMSCRS*PTSWVI
Trigger: TATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTGACCGGTACTGCTaGTATACATCATCACCCATG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSDRYC*YTSSPM
Trigger: CATGGGTGATGATGTATACCAGCAGTACCGGTCACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAAAGGCTACTGGGCTaGTTCACAATCCGGGAAAGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKRLLG*FTIRES
Trigger: ACTTTCCCGGATTGTGAACCAGCCCAGTAGCCTTTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTCCAGGATATTCATaGAATCTTCTCGGTTGGCCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGPGYS*NLLGWP
Trigger: AGGCCAACCGAGAAGATTCCATGAATATCCTGGACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCCAGGAAAGCTGGTTaGAGCTCTTTGACTCCATCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAARKAG*SSLTPS
Trigger: AGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCTGCAGTAGTACGTTaGCTGCATCCTCTAAGCCTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAAAVVR*LHPLSL
Trigger: AAGGCTTAGAGGATGCAGCCAACGTACTACTGCAGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCAAGAAGAACTTCTaGGTAGATGTCTTGGATGTC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLKKNF*VDVLDV
Trigger: GACATCCAAGACATCTACCCAGAAGTTCTTCTTGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGTATCTTGAGCACTaGGAGATGGCTGGTCCACAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAEYLEH*EMAGPH
Trigger: ATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACCGCATGCTGGTCATaGGATTCCTCTAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTACWS*DSSSSF
Trigger: AAAGGAACTAGAGGAATCCCATGACCAGCATGCGGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAACGCTCCAGCTCTTaGCGGAAATATTTGCGCTTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKRSSS*RKYLRL
Trigger: CAAGCGCAAATATTTCCGCCAAGAGCTGGAGCGTTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTTGCAGTGGGAAGATaGATTGATGGTGTAGGTGAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVAVGR*IDGVGD
Trigger: GTCACCTACACCATCAATCCATCTTCCCACTGCAAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGGTTGGGGTTGCAGTaGGAAGATGGATTGATGGTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAWLGLQ*EDGLMV
Trigger: CACCATCAATCCATCTTCCCACTGCAACCCCAACCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGTCATAGCCTAGTGTaGAGACATCATTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGHSLV*RHHFPA
Trigger: TGCTGGAAAATGATGTCTCCACACTAGGCTATGACC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTGTCATTCTCATCTaGCATACCAGGTGTACATAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPVILI*HTRCTY
Trigger: GTATGTACACCTGGTATGCCAGATGAGAATGACAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGGACTGGTACTTGTaGTATTCAGTGTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLDWYL*YSVLDF
Trigger: GAAATCCAACACTGAATACCACAAGTACCAGTCCAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAAACTGGAGGAACTTaGCACGGTCAGCTTGATCGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQTGGT*HGQLDR
Trigger: TCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCTTCAGAGCACTCCTaGATAGCCAACAGTAGCATG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAPSEHS*IANSSM
Trigger: CATGCTACTGTTGGCTATCCAGGAGTGCTCTGAAGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTAAAACACATGGGGTaGGGATCATGGACGGCATGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALKHMG*GSWTAW
Trigger: CCATGCCGTCCATGATCCCCACCCCATGTGTTTTAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCAGGGATGGTTTCCTaGAGAATCCATCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAGMVS*RIHLFS
Trigger: GGAGAAAAGATGGATTCTCCAGGAAACCATCCCTGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCTTTAAGCACTGGATaGAGTAAAAACCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFALSTG*SKNHKG
Trigger: TCCCTTGTGGTTTTTACTCCATCCAGTGCTTAAAGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAATGTTCCATGTTTTaGTCTGCTGCAGTTCCAAGA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQCSMF*SAAVPR
Trigger: TCTTGGAACTGCAGCAGATCAAAACATGGAACATTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATACATATAGGAGATTaGGGACTGCCAGCACCACTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVIHIGD*GLPAPL
Trigger: AAGTGGTGCTGGCAGTCCTCAATCTCCTATATGTAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATCTGCCTTCTGGATTaGTGGCTTCTGACAGATGTA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVICLLD*WLLTDV
Trigger: TACATCTGTCAGAAGCCATCAATCCAGAAGGCAGAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGCAACAGTCCTTTCTaGTTCACAAATTCCTGGCAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGNSPF*FTNSWQ
Trigger: CTGCCAGGAATTTGTGAATCAGAAAGGACTGTTGCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGACTTTGGGTTCATGTaGCAGTGTCAATATGGATTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDFGFM*QCQYGF
Trigger: AAATCCATATTGACACTGTCACATGAACCCAAAGTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGTGACTCTGCCCTTTaGTCCATTGGAATATCCTGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGDSAL*SIGISC
Trigger: ACAGGATATTCCAATGGATCAAAGGGCAGAGTCACC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTGACTTATCCACTCTaGCACGGTTTTTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLTYPL*HGFCVT
Trigger: AGTGACACAAAAACCGTGTCAGAGTGGATAAGTCAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATTAATGGAAAAACCTaGCTGCGTATCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVINGKT*LRIKVT
Trigger: AGTGACTTTGATACGCAGTCAGGTTTTTCCATTAAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTCAGTGGAGTCATTTaGCTTAGATGCAGTACACTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFSGVI*LRCSTL
Trigger: CAGTGTACTGCATCTAAGTCAAATGACTCCACTGAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTAGCTGCATCAGTTaGAGATGGGGTTGTTGGGTA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACSCIS*RWGCWV
Trigger: TACCCAACAACCCCATCTTCAACTGATGCAGCTACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTTGCCTTTCCGGCTaGCATTCATGTTGTCCAGTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASCLSG*HSCCPV
Trigger: AACTGGACAACATGAATGTCAGCCGGAAAGGCAAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATGGAACTGTACAGATaGCGGGAAAAGCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVMELYR*REKLYS
Trigger: TGAGTACAGCTTTTCCCGGCATCTGTACAGTTCCAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATCTTTGATAAGCAGTaGATGCAGCATGACATCTGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFIFDKQ*MQHDIC
Trigger: ACAGATGTCATGCTGCATGCACTGCTTATCAAAGAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGCATTCAAACAGAGTaGACTGAATACATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGIQTE*TEYIWE
Trigger: CTCCCAAATGTATTCAGTGCACTCTGTTTGAATGCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTGTTGCTGTTGGATTaGAGGTACTTAGTCATCTGG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLLLLD*RYLVIW
Trigger: CCAGATGACTAAGTACCTGCAATCCAACAGCAACAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTAAGTGACCGGTACTaGTGGTATACATCATCACCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVSDRY*WYTSSP
Trigger: GGGTGATGATGTATACCAGCAGTACCGGTCACTTAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAAGGTTTGCTGCCCTTaGCTTTCTGTTTGCCTTCCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAKVCCP*LSVCLP
Trigger: AGGAAGGCAAACAGAAAGGCAAGGGCAGCAAACCTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGATGATACACATCACTaGCTGAAGCCTGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDDTHH*LKPGMF
Trigger: AAACATGCCAGGCTTCAGGCAGTGATGTGTATCATC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGCTCATTCTCAACCTaGATCTCTTGTGAACTGAGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSSFST*ISCELS
Trigger: GCTCAGTTCACAAGAGATGCAGGTTGAGAATGAGCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTTGGGAGTGTTGGTTaGTGTTGTGAGGATTGCAGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVGSVG*CCEDCR
Trigger: TCTGCAATCCTCACAACAGCAACCAACACTCCCAAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGTATCTACATTACTaGCAGAAGGCCTGTTATGGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVEYLHY*QKACYG
Trigger: GCCATAACAGGCCTTCTGGCAGTAATGTAGATACTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTTTGGGTGTTTCAATaGATAGCTCACTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVWVFQ*IAHSHC
Trigger: GCAGTGAGAGTGAGCTATGCATTGAAACACCCAAAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATCGAAAGAACGCAATaGTCTCCAGAACCACTGGAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVIERTQ*SPEPLD
Trigger: ATCCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATGTTTTGTACAACCTaGTGCAGTTTGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKMFCTT*CSLFPL
Trigger: CAAGGGGAACAAACTGCAGCAGGTTGTACAAAACAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCATACTCATCCTGGTaGGAAATTCCCCACACTGCT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASYSSW*EIPHTA
Trigger: AGCAGTGTGGGGAATTTCCCACCAGGATGAGTATGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATATTGCATGCAGTCTaGCCTGAACTGCCTGCAATC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAILHAV*PELPAI
Trigger: GATTGCAGGCAGTTCAGGCCAGACTGCATGCAATAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGAGTTCTCTCCAAGTaGACAATTGATGTTAATGTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGVLSK*TIDVNV
Trigger: AACATTAACATCAATTGTCCACTTGGAGAGAACTCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTTCCTTACAAGCACTaGCAAAAATCCATGGTAGGA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVPYKH*QKSMVG
Trigger: TCCTACCATGGATTTTTGCCAGTGCTTGTAAGGAAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGATCAATCATGGCCTaGATACAGTTCCTTACAAGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGSIMA*IQFLTS
Trigger: GCTTGTAAGGAACTGTATCCAGGCCATGATTGATCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGAAGGATCAATCATaGCCTGGATACAGTTCCTTA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWKDQS*PGYSSL
Trigger: TAAGGAACTGTATCCAGGCCATGATTGATCCTTCCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGGTCTCTGGATCTTTaGCTTGATCACAAACGGACA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGSLDL*LDHKRT
Trigger: TGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTCAATCCATTGTCCTaGAGTGAGGAGAGCAGTGAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVNPLS*SEESSD
Trigger: ATCACTGCTCTCCTCACTCCAGGACAATGGATTGAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGCTGGGAGGTAATCTaGAGACAGAAGAACTTTGAA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGWEVI*RQKNFE
Trigger: TTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTGACAGATGTATTTaGGGTCCCTTCCAAGATTAC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSDRCI*GPFQDY
Trigger: GTAATCTTGGAAGGGACCCCAAATACATCTGTCAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCAGTTTCATTTTGCTaGGTAGAATTAAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSVSFC*VELKLC
Trigger: GCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAACTGGTTTACGGAGATaGAACGAATTTCACTCTGTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKTGLRR*NEFHSV
Trigger: GACAGAGTGAAATTCGTTCCATCTCCGTAAACCAGT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTCTGCATATCTGCCTaGCCAAATTCACACCCAGAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFCISA*PNSHPD
Trigger: ATCTGGGTGTGAATTTGGCCAGGCAGATATGCAGAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCTTCTAATAAGCCCTaGGTAGAAGCATCCATACTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPSNKP*VEASIL
Trigger: AAGTATGGATGCTTCTACCCAGGGCTTATTAGAAGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTTCATCTGTCTCCATaGGAGCCAATGTGTCACCAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVHLSP*EPMCHH
Trigger: ATGGTGACACATTGGCTCCCATGGAGACAGATGAAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATTGCTCTCATCATCTaGTCCTCTTCAGACATGCTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVIALII*SSSDML
Trigger: CAGCATGTCTGAAGAGGACCAGATGATGAGAGCAAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGCTCATCAAGAAGGTaGAAGCAGCCTGGCAACATA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSSRR*KQPGNI
Trigger: TATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATCACTCACCTTCGCTaGAGATTTGCTGCCCTTAGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAITHLR*RFAALS
Trigger: ACTAAGGGCAGCAAATCTCCAGCGAAGGTGAGTGAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACCGCATGCTGGTCATaGGATTCCTCTAGTTCCTTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQATACWS*DSSSSF
Trigger: AAAGGAACTAGAGGAATCCCATGACCAGCATGCGGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGTCTTCAAACACATaGTCACGACGGACATGCACA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAESSNT*SRRTCT
Trigger: TGTGCATGTCCGTCGTGACCATGTGTTTGAAGACTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTCATAGCCTAGTGTaGAGACATCATTTTCCAGCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGHSLV*RHHFPA
Trigger: TGCTGGAAAATGATGTCTCCACACTAGGCTATGACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAAACTCCAAACTCTTaGACCTCAGTGCTGAAGGTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQTPNS*TSVLKV
Trigger: CACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCTGTCATTCTCATCTaGCATACCAGGTGTACATAC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPVILI*HTRCTY
Trigger: GTATGTACACCTGGTATGCCAGATGAGAATGACAGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGGACTGGTACTTGTaGTATTCAGTGTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLDWYL*YSVLDF
Trigger: GAAATCCAACACTGAATACCACAAGTACCAGTCCAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCAGGGATGGTTTCCTaGAGAATCCATCTTTTCTCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAAGMVS*RIHLFS
Trigger: GGAGAAAAGATGGATTCTCCAGGAAACCATCCCTGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTTTAAGCACTGGATaGAGTAAAAACCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKALSTG*SKNHKG
Trigger: TCCCTTGTGGTTTTTACTCCATCCAGTGCTTAAAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAAGATACTGTTTGCTaGTTCCTGCAAGGCATTGGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQDTVC*FLQGIG
Trigger: TCCAATGCCTTGCAGGAATCAGCAAACAGTATCTTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGCCAAGAAACTTTATaGCCTTCAATAAGGCTTCCA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRQETL*PSIRLP
Trigger: TGGAAGCCTTATTGAAGGTCATAAAGTTTCTTGGCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGCAGTGATGGTTCTTaGAATACAAACACAGTCACC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSSDGS*NTNTVT
Trigger: GGTGACTGTGTTTGTATTTCAAGAACCATCACTGCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGACTTTGGGTTCATGTaGCAGTGTCAATATGGATTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKDFGFM*QCQYGF
Trigger: AAATCCATATTGACACTGTCACATGAACCCAAAGTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTTGCCCTTAGAGTCTaGAGCAGTAGGTTCATCTGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFALRV*SSRFIC
Trigger: ACAGATGAACCTACTGCTTCAGACTCTAAGGGCAAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGGACAGAGCCCAGTTaGAAGTTTCAAAAAGAGCAT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVWTEPS*KFQKEH
Trigger: ATGCTCTTTTTGAAACTTTCAACTGGGCTCTGTCCA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTGACTTATCCACTCTaGCACGGTTTTTGTGTCACT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALTYPL*HGFCVT
Trigger: AGTGACACAAAAACCGTGTCAGAGTGGATAAGTCAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATTAAGGATGCCACTTaGTTCAACCACCCAAGCACA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAIKDAT*FNHPST
Trigger: TGTGCTTGGGTGGTTGAATCAAGTGGCATCCTTAAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTCAGTGGAGTCATTTaGCTTAGATGCAGTACACTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVFSGVI*LRCSTL
Trigger: CAGTGTACTGCATCTAAGTCAAATGACTCCACTGAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATCTGTATATCTGACTaGCTTGCCCAAGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKICISD*LAQDVF
Trigger: AAACACATCTTGGGCAAGTCAGTCAGATATACAGAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGTTCCAAGAGAAGTTaGTCATCATTACAAACTTTG +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSKRS*SSLQTL
Trigger: CAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCATGTTTTGATCTGCTaGAGTTCCAAGAGAAGTTGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHVLIC*SSKRSC
Trigger: GCAACTTCTCTTGGAACTGCAGCAGATCAAAACATG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGGAACTGTACAGATaGCGGGAAAAGCTGTACTCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAMELYR*REKLYS
Trigger: TGAGTACAGCTTTTCCCGGCATCTGTACAGTTCCAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGGGCCATAGTATTCTaGATTGCTGATGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKWAIVF*IADDVF
Trigger: AAACACATCATCAGCAATGCAGAATACTATGGCCCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTAGAATTAAAGCTCTaGATGGCCTGTACTTCCTCT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVELKL*MACTSS
Trigger: AGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAACAAAGGCTTGATTTaGTTAATTCTGGCAGCCATT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNKGLI*LILAAI
Trigger: AATGGCTGCCAGAATTAAGCAAATCAAGCCTTTGTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCCATTACGTTTGATTaGTGTCATGATCAGGTCACA +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSITFD*CHDQVT
Trigger: TGTGACCTGATCATGACAGCAATCAAACGTAATGGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCAAAGGGGTATCATTaGCTTTATTTTCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPKGYH*LYFLYV
Trigger: AACGTAAAGAAAATAAAGGCAATGATACCCCTTTGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGATGATACACATCACTaGCTGAAGCCTGGCATGTTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQADDTHH*LKPGMF
Trigger: AAACATGCCAGGCTTCAGGCAGTGATGTGTATCATC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACTGAAACACAGTCATaGATGCTCTCAGCATCGAGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQATETQS*MLSASR
Trigger: TCTCGATGCTGAGAGCATGCATGACTGTGTTTCAGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTTTGGGTGTTTCAATaGATAGCTCACTCTCACTGC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVWVFQ*IAHSHC
Trigger: GCAGTGAGAGTGAGCTATGCATTGAAACACCCAAAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGTCAAACCTGCTCTaGATTTTGCCCTTCAGCTTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAMSNLL*ILPFSL
Trigger: CAAGCTGAAGGGCAAAATGCAGAGCAGGTTTGACAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGTCGCTTCTGAGATaGCACAATTACCACATTCTC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARSLLR*HNYHIL
Trigger: GAGAATGTGGTAATTGTGGCATCTCAGAAGCGACCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTGAGTTATGAAGAGTaGTCTTTATTTGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVSYEE*SLFETS
Trigger: GGAGGTTTCAAATAAAGAGCACTCTTCATAACTCAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAGTTGCTCTCTTTCTaGCCTATCACATACGAGCAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAQLLSF*PITYEH
Trigger: ATGCTCGTATGTGATAGGCCAGAAAGAGAGCAACTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGTAGTTGCACTGGGTaGATATTTCATCATATGCAA +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCSCTG*IFHHMQ
Trigger: TTGCATATGATGAAATATCCACCCAGTGCAACTACA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAGTTCTCTCCAAGTaGACAATTGATGTTAATGTT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGVLSK*TIDVNV
Trigger: AACATTAACATCAATTGTCCACTTGGAGAGAACTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTTCCTTACAAGCACTaGCAAAAATCCATGGTAGGA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVPYKH*QKSMVG
Trigger: TCCTACCATGGATTTTTGCCAGTGCTTGTAAGGAAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTAGTATTGGGTCTCTaGATCTTTGGCTTGATCACA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVVLGL*IFGLIT
Trigger: TGTGATCAAGCCAAAGATCCAGAGACCCAATACTAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGGAACAGTATAACTaGCTCAGCTTGCTCAAAACA +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVREQYN*LSLLKT
Trigger: TGTTTTGAGCAAGCTGAGCCAGTTATACTGTTCCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGCCCTTTGATCCATTaGAATATCCTGTCCCAGAGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACPLIH*NILSQR
Trigger: TCTCTGGGACAGGATATTCCAATGGATCAAAGGGCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGTACTTAGTCATCTaGGCTCTCCTTTTTGAGGAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARYLVI*ALLFEE
Trigger: CTCCTCAAAAAGGAGAGCCCAGATGACTAAGTACCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAACAACCTTTTCCATaGTATGACGAAGGGTACAGG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAEQPFP*YDEGYR
Trigger: CCTGTACCCTTCGTCATACCATGGAAAAGGTTGTTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCCTCAGAACAAGAGTaGGATGTCAACACCTCTACA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSEQE*DVNTST
Trigger: TGTAGAGGTGTTGACATCCCACTCTTGTTCTGAGGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCCATCGGAGGCAATaGATTGAGTATCTTGAGCAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFHRRQ*IEYLEH
Trigger: GTGCTCAAGATACTCAATCCATTGCCTCCGATGGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTCATATACAGCTTTaGCCACAATGCGTCCGACAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACHIQL*PQCVRQ
Trigger: TTGTCGGACGCATTGTGGCCAAAGCTGTATATGACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGTGGTATTCAGTGTTaGATTTCAGATCATCGATGT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCGIQC*ISDHRC
Trigger: ACATCGATGATCTGAAATCCAACACTGAATACCACA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTGGACTGGTACTTGTaGTATTCAGTGTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLDWYL*YSVLDF
Trigger: GAAATCCAACACTGAATACCACAAGTACCAGTCCAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCAGAAGGGCTTTCTaGAATCTTGTCAAGTTGCTC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFRRAF*NLVKLL
Trigger: GAGCAACTTGACAAGATTTCAGAAAGCCCTTCTGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTGGATCTTTGGCTTaGTCACAAACGGACATTCTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASGSLA*SQTDIL
Trigger: AAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGCAGTGATGGTTCTTaGAATACAAACACAGTCACC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSDGS*NTNTVT
Trigger: GGTGACTGTGTTTGTATTTCAAGAACCATCACTGCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATTAATGGAAAAACCTaGCTGCGTATCAAAGTCACT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKINGKT*LRIKVT
Trigger: AGTGACTTTGATACGCAGTCAGGTTTTTCCATTAAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCAGGAATTCCAGGTaGTTGACAATGGACACTTTA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQALRNSR*LTMDTL
Trigger: TAAAGTGTCCATTGTCAATCACCTGGAATTCCTGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCAGTGGAGTCATTTaGCTTAGATGCAGTACACTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAFSGVI*LRCSTL
Trigger: CAGTGTACTGCATCTAAGTCAAATGACTCCACTGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR TCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATACCTTGGCCAATTaGATGAGTGTATCCAAAACG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNTLAN*MSVSKT
Trigger: CGTTTTGGATACACTCATTCAATTGGCCAAGGTATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGTAGTGGGAGAAATTaGAACAGTAGTGGTAGCAGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASSGRN*NSSGSS
Trigger: ACTGCTACCACTACTGTTTCAATTTCTCCCACTACT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR TCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGAGTGCTCTTTATTTaGAACCTCCACAACACAGAC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARVLFI*NLHNTD
Trigger: GTCTGTGTTGTGGAGGTTTCAAATAAAGAGCACTCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGTTCCAAGAGAAGTTaGTCATCATTACAAACTTTG +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSKRS*SSLQTL
Trigger: CAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGATATTTCATCATATaGAAGTCTCTGCAACATTCT +
Preference number: 4 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGYFII*KSLQHS
Trigger: AGAATGTTGCAGAGACTTGCATATGATGAAATATCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGATATTTCATCATATaGAAGTCTCTGCAACATTCT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGYFII*KSLQHS
Trigger: AGAATGTTGCAGAGACTTGCATATGATGAAATATCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTAAATAACAGCATCTaGTTATCCTTAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVNNSI*LSLGML
Trigger: CAGCATTCCTAAGGATAAGCAGATGCTGTTATTTAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGGGATTGAAAAGCTaGCATATCCAGGTTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAMGLKS*HIQVGD
Trigger: ATCACCAACCTGGATATGGCAGCTTTTCAATCCCAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGCATTCAAACAGAGTaGACTGAATACATTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGIQTE*TEYIWE
Trigger: CTCCCAAATGTATTCAGTGCACTCTGTTTGAATGCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAATTCTGGCAGCCATTaGTGGTGTGATTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKNSGSH*WCDFRF
Trigger: AAATCTAAAATCACACCAGCAATGGCTGCCAGAATT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCCAAAGGGGTATCATTaGCTTTATTTTCTTTACGTT +
Preference number: 4 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSPKGYH*LYFLYV
Trigger: AACGTAAAGAAAATAAAGGCAATGATACCCCTTTGG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCAAATTCAAGATCATaGGGGTACTCTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSNSRS*GYSSVL
Trigger: CAGAACTGAAGAGTACCCGCATGATCTTGAATTTGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGATCAGATTTATCTaGTTCCTCTGGAGCATGGTA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARIRFI*FLWSMV
Trigger: TACCATGCTCCAGAGGAAGCAGATAAATCTGATCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAAACACAGTCATGCATaGTCTCAGCATCGAGAACTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAKHSHA*SQHREL
Trigger: AAGTTCTCGATGCTGAGAGCATGCATGACTGTGTTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGTTTTGTACAACCTaGTGCAGTTTGTTCCCCTTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAMFCTT*CSLFPL
Trigger: CAAGGGGAACAAACTGCAGCAGGTTGTACAAAACAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACGTTGTGGAATACACTaGACTCCATCCATATCAGTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARCGIH*TPSISV
Trigger: AACTGATATGGATGGAGTCCAGTGTATTCCACAACG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGTGGTATTCAGTGTTaGATTTCAGATCATCGATGT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCGIQC*ISDHRC
Trigger: ACATCGATGATCTGAAATCCAACACTGAATACCACA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTGGACTGGTACTTGTaGTATTCAGTGTTGGATTTC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLDWYL*YSVLDF
Trigger: GAAATCCAACACTGAATACCACAAGTACCAGTCCAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCTTTAAGCACTGGATaGAGTAAAAACCACAAGGGA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAALSTG*SKNHKG
Trigger: TCCCTTGTGGTTTTTACTCCATCCAGTGCTTAAAGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
3UTR CAA 72 bp TCTTTATTTGAAACCTCCACAACACAGACGCCAATCTaGTCTCGCATTGAATCATTAGCTGTGCACATCAAC +
Preference number: 4 (lower is better)
Translates to: SLFETSTTQTPI*SRIESLAVHIN
Trigger: GTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGGCGTCTGTGTTGTGGAGGTTTCAAATAAAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGAAGCATTTTCAGTTaGTCTCTTTCTGGCCTATCA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQARSIFS*SLSGLS
Trigger: TGATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGATATTTCATCATATaGAAGTCTCTGCAACATTCT +
Preference number: 4 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGYFII*KSLQHS
Trigger: AGAATGTTGCAGAGACTTGCATATGATGAAATATCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGGGCCATAGTATTCTaGATTGCTGATGATGTGTTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAWAIVF*IADDVF
Trigger: AAACACATCATCAGCAATGCAGAATACTATGGCCCA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATCTTTGATAAGCAGTaGATGCAGCATGACATCTGT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAIFDKQ*MQHDIC
Trigger: ACAGATGTCATGCTGCATGCACTGCTTATCAAAGAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATTCTGGCAGCCATTaGTGGTGTGATTTTAGATTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNSGSH*WCDFRF
Trigger: AAATCTAAAATCACACCAGCAATGGCTGCCAGAATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGTACTCTTCAGTTCTaGAAACATCATGGCATATTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGTLQF*KHHGIF
Trigger: AAATATGCCATGATGTTTGCAGAACTGAAGAGTACC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCAAATTCAAGATCATaGGGGTACTCTTCAGTTCTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQASNSRS*GYSSVL
Trigger: CAGAACTGAAGAGTACCCGCATGATCTTGAATTTGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCAGTTTCATTTTGCTaGGTAGAATTAAAGCTCTGC +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSVSFC*VELKLC
Trigger: GCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTGTGGTATTCAGTGTTaGATTTCAGATCATCGATGT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVCGIQC*ISDHRC
Trigger: ACATCGATGATCTGAAATCCAACACTGAATACCACA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCACACGGTGAGTTGGTaGATTTCATTTATTGGTTTT +
Preference number: 4 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHTVSW*ISFIGF
Trigger: AAAACCAATAAATGAAATCCACCAACTCACCGTGTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTAAATAACAGCATCTaGTTATCCTTAGGAATGCTG +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVNNSI*LSLGML
Trigger: CAGCATTCCTAAGGATAAGCAGATGCTGTTATTTAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR GCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTGAGTTATGAAGAGTaGTCTTTATTTGAAACCTCC +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAVSYEE*SLFETS
Trigger: GGAGGTTTCAAATAAAGAGCACTCTTCATAACTCAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTAGTTGCACTGGGTaGATATTTCATCATATGCAA +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQACSCTG*IFHHMQ
Trigger: TTGCATATGATGAAATATCCACCCAGTGCAACTACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CCA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGAGTTCTCTCCAAGTaGACAATTGATGTTAATGTT +
Preference number: 4 (lower is better)
Translates to: PILSRIESLAVHINTFQAGVLSK*TIDVNV
Trigger: AACATTAACATCAATTGTCCACTTGGAGAGAACTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TGCCGAGGCCTCGGCCGCAATGGCTCCGCGGGGCCCGCAGGAGCGTaGGGGGTCCGCGGCCCTGCTTCAGCCCTGCTTCAGCCCTGCTCC +
Preference number: 5 (lower is better)
Translates to: CRGLGRNGSAGPAGA*GVRGPASALLQPCS
Trigger: GGAGCAGGGCTGAAGCAGGGCTGAAGCAGGGCCGCGGACCCCGCACGCTCCTGCGGGCCCCGCGGAGCCATTGCGGCCGAGGCCTCGGCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000218328.12
ENST00000262854.11
CDS CCA 90 bp CCGCCACAGCTGGTGGGGCATCCCCAGGAGTGGAGCTGCCTGCTCTaGGCTGCTCAGAACTGCCAGCTGCTGAAGTGTCACCCACAGCCT +
Preference number: 5 (lower is better)
Translates to: PPQLVGHPQEWSCLL*AAQNCQLLKCHPQP
Trigger: AGGCTGTGGGTGACACTTCAGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCCCACCAGCTGTGGCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TCCTGCCTTGCACTTCCGCCACAGCTGGTGGGGCATCCCCAGGAGTaGAGCTGCCTGCTCTGGGCTGCTCAGAACTGCCAGCTGCTGAAG +
Preference number: 5 (lower is better)
Translates to: SCLALPPQLVGHPQE*SCLLWAAQNCQLLK
Trigger: CTTCAGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCCCACCAGCTGTGGCGGAAGTGCAAGGCAGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp ACAGCTGGTGGGGCATCCCCAGGAGTGGAGCTGCCTGCTCTGGGCTaGTCAGAACTGCCAGCTGCTGAAGTGTCACCCACAGCCTCCTCT +
Preference number: 5 (lower is better)
Translates to: TAGGASPGVELPALG*SELPAAEVSPTASS
Trigger: AGAGGAGGCTGTGGGTGACACTTCAGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCCCACCAGCTGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TGTGGCTGCTCCTCAGGCAGGCCATCAGGAGAGAGGGTTTCACATTaGGCTCGCCGCTGCTGCTCGAGGTTGTATTCCCGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: CGCSSGRPSGERVSH*ARRCCSRLYSRSSA
Trigger: GGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGAGGAGCAGCCACA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS-3UTR CAA 90 bp GCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACCGCTGCTGCTCGAGGTaGTATTCCCGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: ALGDGWSTSMGDSSLRTDRCCSR*YSRSSA
Trigger: GGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCG...GTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS TCA 90 bp TGTGGGCGTGGTGGAGGCGGCAGTGGTGGTGGTGGTAGATGTGGTTaGGGTGGCAGTGGTGGTGGAGGAAGCACCGCTGCCAGAATTAGC +
Preference number: 5 (lower is better)
Translates to: CGRGGGGSGGGGRCG*GGSGGGGSTAARIS
Trigger: GCTAATTCTGGCAGCGGTGCTTCCTCCACCACCACTGCCACCTCAACCACATCTACCACCACCACCACTGCCGCCTCCACCACGCCCACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS GCA 90 bp TCAGGCAGGCCATCAGGAGAGAGGGTTTCACATTGGGCTCGCCGCTaGTGCTCGAGGTTGTATTCCCGCAGCTCGGCCAGCAGGGTACCT +
Preference number: 5 (lower is better)
Translates to: SGRPSGERVSHWARR*CSRLYSRSSASRVP
Trigger: AGGTACCCTGCTGGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS TCA 90 bp AGGGCTCACTTCAGTCACACCAGGATTCCCCACCACTGCAGGCGCTaGGCTATTTGTGGAGGGGGCAGTCCGGGTTGGTGGACGAATGCC +
Preference number: 5 (lower is better)
Translates to: RAHFSHTRIPHHCRR*AICGGGSPGWWTNA
Trigger: GGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGGGGAATCCTGGTGTGACTGAAGTGAGCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CAAGGGCTGCTTTTACTTCATTCACTAGGGCCACCTGGGCATCTGTaGCACTCCCTGCAGCAGCCAGGCTTGCGAGGAACAGGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: QGLLLLHSLGPPGHL*HSLQQPGLRGTGGP
Trigger: TGGCCCGCCTGTTCCTCGCAAGCCTGGCTGCTGCAGGGAGTGGCACAGATGCCCAGGTGGCCCTAGTGAATGAAGTAAAAGCAGCCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp GGCAGGCCATCAGGAGAGAGGGTTTCACATTGGGCTCGCCGCTGCTaGTCGAGGTTGTATTCCCGCAGCTCGGCCAGCAGGGTACCTATT +
Preference number: 5 (lower is better)
Translates to: GRPSGERVSHWARRC*SRLYSRSSASRVPI
Trigger: AATAGGTACCCTGCTGGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CCA 90 bp TCACGGGTGTCTCGGACAGGAGGCTTGCTCTCCCGCTCTGTGGCATaGACCAGAAAGAAGGCCTCGACAGCAGGCTGTAGCACTAGCACC +
Preference number: 5 (lower is better)
Translates to: SRVSRTGGLLSRSVA*TRKKASTAGCSTST
Trigger: GGTGCTAGTGCTACAGCCTGCTGTCGAGGCCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGACACCCGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp GGCTCTCACGGGTGTCTCGGACAGGAGGCTTGCTCTCCCGCTCTGTaGCATGGACCAGAAAGAAGGCCTCGACAGCAGGCTGTAGCACTA +
Preference number: 5 (lower is better)
Translates to: GSHGCLGQEACSPAL*HGPERRPRQQAVAL
Trigger: TAGTGCTACAGCCTGCTGTCGAGGCCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGACACCCGTGAGAGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGAGAGAGGGTTTCACATaGGGCTCGCCGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: HWEMAGPHPWVIPPSGQTREGFT*GSPLLL
Trigger: GAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCT...CGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS TCA 90 bp CCGTCAGCTGCCTTAGGGTCCTCTGACTGCGCCCGATGCCCTGGGTaGGACGAGTTGTTGAAGAGCCACTGCCCAGTGTCAGAGAACTGT +
Preference number: 5 (lower is better)
Translates to: PSAALGSSDCARCPG*DELLKSHCPVSENC
Trigger: ACAGTTCTCTGACACTGGGCAGTGGCTCTTCAACAACTCGTCTCACCCAGGGCATCGGGCGCAGTCAGAGGACCCTAAGGCAGCTGACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp CAGAGAGTGCGGAGGTGCTACTGTGCCCAAACAGACGCTCATGCATaGGCTGTCGCTGCCGGGCTTCTTGCTCTCGTCTCAGGGCTTGAG +
Preference number: 5 (lower is better)
Translates to: QRVRRCYCAQTDAHA*AVAAGLLALVSGLE
Trigger: CTCAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CGCAAGCCAGTTCTCGCAACAACACTGAGCCCCCAGGGGATTCAATaGGGCGGTGTAAGGGCTCCAGGGAGGAGAGGATGGAGTCCAACT +
Preference number: 5 (lower is better)
Translates to: RKPVLATTLSPQGIQ*GGVRAPGRRGWSPT
Trigger: AGTTGGACTCCATCCTCTCCTCCCTGGAGCCCTTACACCGCCCCATTGAATCCCCTGGGGGCTCAGTGTTGTTGCGAGAACTGGCTTGCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GCTGGCGATTCCCAGGGTAGTGAACATGAATGGTGTGGCCAGTATTaGCCGTCAGCTGCCTTAGGGTCCTCTGACTGCGCCCGATGCCCT +
Preference number: 5 (lower is better)
Translates to: AGDSQGSEHEWCGQY*PSAALGSSDCARCP
Trigger: AGGGCATCGGGCGCAGTCAGAGGACCCTAAGGCAGCTGACGGCCAATACTGGCCACACCATTCATGTTCACTACCCTGGGAATCGCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CAGTCACACCAGGATTCCCCACCACTGCAGGCGCTGAGCTATTTGTaGAGGGGGCAGTCCGGGTTGGTGGACGAATGCCTAGCTGGTTCT +
Preference number: 5 (lower is better)
Translates to: QSHQDSPPLQALSYL*RGQSGLVDECLAGS
Trigger: AGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGGGGAATCCTGGTGTGACTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp GAGGGGCAGGAAGGGCGATGCGGATACAGCAGTTGGCCACTTCTGTaGATATGTCTGGATTGCGGCATGCGGCTGGCCCAAGGACACGAA +
Preference number: 5 (lower is better)
Translates to: EGQEGRCGYSSWPLL*ICLDCGMRLAQGHE
Trigger: TTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGCTGTATCCGCATCGCCCTTCCTGCCCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp ATAGCAGAGAGTGCGGAGGTGCTACTGTGCCCAAACAGACGCTCATaGATGAGCTGTCGCTGCCGGGCTTCTTGCTCTCGTCTCAGGGCT +
Preference number: 5 (lower is better)
Translates to: IAESAEVLLCPNRRS*MSCRCRASCSRLRA
Trigger: AGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTGCTAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp AAAGCCGGGCTTCGGAGAATAGCAGAGAGTGCGGAGGTGCTACTGTaGCCAAACAGACGCTCATGCATGAGCTGTCGCTGCCGGGCTTCT +
Preference number: 5 (lower is better)
Translates to: KAGLRRIAESAEVLL*PNRRSCMSCRCRAS
Trigger: AGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTGCTATTCTCCGAAGCCCGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TGGAAAAAGTCATCCAGCAGCTCATCATCAGAACGGGCGATGATGTaGACGTCATCGTTGCCTACCAGGAGGCGGGCCCGACCCCGGCTT +
Preference number: 5 (lower is better)
Translates to: WKKSSSSSSSERAMM*TSSLPTRRRARPRL
Trigger: AAGCCGGGGTCGGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACATCATCGCCCGTTCTGATGATGAGCTGCTGGATGACTTTTTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CTATTTGTGGAGGGGGCAGTCCGGGTTGGTGGACGAATGCCTAGCTaGTTCTGTAGAACTTCCCGACGGATGTCATCAGGCAGGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LFVEGAVRVGGRMPS*FCRTSRRMSSGRAA
Trigger: GGCTGCCCTGCCTGATGACATCCGTCGGGAAGTTCTACAGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CCCATCTGGAAGGTGCCACCTCTCTGCACAGCAAGGCGAGTATACTaGACCCCACGGTTGCCACTTAAGCGACTGGTGAAAGCCGGGCTT +
Preference number: 5 (lower is better)
Translates to: PIWKVPPLCTARRVY*TPRLPLKRLVKAGL
Trigger: AAGCCCGGCTTTCACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGCTGTGCAGAGAGGTGGCACCTTCCAGATGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGGCGCTGAGCTATTaGTGGAGGGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITQALSY*WRGQSG
Trigger: CCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCAGGCGCTGAGCTATTaGTGGAGGGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPQALSY*WRGQSG
Trigger: CCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCGCTGCTGCTCGAGGTaGTATTCCCGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPRCCSR*YSRSSA
Trigger: GGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp GTTGATCGCGCGGCAGGTGTCGGTGCTGTAGTGGTGCTGGCAGCATaGTGGCTCCTTCTCTGGCGGACAGGAGATCCCACACAAAGTTTA +
Preference number: 5 (lower is better)
Translates to: VDRAAGVGAVVVLAA*WLLLWRTGDPTQSL
Trigger: TAAACTTTGTGTGGGATCTCCTGTCCGCCAGAGAAGGAGCCATCATGCTGCCAGCACCACTACAGCACCGACACCTGCCGCGCGATCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp GATCATGGAAAAAGTCATCCAGCAGCTCATCATCAGAACGGGCGATaGTGTGGACGTCATCGTTGCCTACCAGGAGGCGGGCCCGACCCC +
Preference number: 5 (lower is better)
Translates to: DHGKSHPAAHHQNGR*CGRHRCLPGGGPDP
Trigger: GGGGTCGGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACATCATCGCCCGTTCTGATGATGAGCTGCTGGATGACTTTTTCCATGATC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp TGCATGAGCTGTCGCTGCCGGGCTTCTTGCTCTCGTCTCAGGGCTTaGGCCTCAGCTGCAATGTCAGGTGGCATCACAGCTAACACACTG +
Preference number: 5 (lower is better)
Translates to: CMSCRCRASCSRLRA*ASAAMSGGITANTL
Trigger: CAGTGTGTTAGCTGTGATGCCACCTGACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp GCTCACTCTCACTGCTGCGCTGCAAGATGGAGAGCAGACTGCGGATaGCCCAGTGGCGGGTCTGGGCATGGTAGCAGAGATTTCTCAGTA +
Preference number: 5 (lower is better)
Translates to: AHSHCCAARWRADCG*PSGGSGHGSRDFSV
Trigger: TACTGAGAAATCTCTGCTACCATGCCCAGACCCGCCACTGGGTCATCCGCAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 90 bp TATTTGTGGTCCCGGGTGAGCCTCAGACAGAGACGAAGGGTGGCATaGAAAGTATCTGGGTCCACAGGGACTCCCAGCATGCTCACGCAG +
Preference number: 5 (lower is better)
Translates to: YLWSRVSLRQRRRVA*KVSGSTGTPSMLTQ
Trigger: CTGCGTGAGCATGCTGGGAGTCCCTGTGGACCCAGATACTTTGCATGCCACCCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp GCGCTGAGCTATTTGTGGAGGGGGCAGTCCGGGTTGGTGGACGAATaGCTAGCTGGTTCTGTAGAACTTCCCGACGGATGTCATCAGGCA +
Preference number: 5 (lower is better)
Translates to: ALSYLWRGQSGLVDE*LAGSVELPDGCHQA
Trigger: TGCCTGATGACATCCGTCGGGAAGTTCTACAGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TGCTCCAGTCACGCTGGCCCTGGAATACACCATGCTCTCTTGTGGTaGTGTTTACCTGACAGTGTCTCCCCAGCCCCCACTGTGTCTAGC +
Preference number: 5 (lower is better)
Translates to: CSSHAGPGIHHALLW*CLPDSVSPAPTVSS
Trigger: GCTAGACACAGTGGGGGCTGGGGAGACACTGTCAGGTAAACAGCACCACAAGAGAGCATGGTGTATTCCAGGGCCAGCGTGACTGGAGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CCA 90 bp GGATTCCTCGGGAATCTGCTCCAGAAATGGCCACGGCAGAATCTCTaGTGGAAGAGCTCTCAGAGGATGCAGGTGGGGAGCTGTCCTCAG +
Preference number: 5 (lower is better)
Translates to: GFLGNLLQKWPRQNL*WKSSQRMQVGSCPQ
Trigger: CTGAGGACAGCTCCCCACCTGCATCCTCTGAGAGCTCTTCCACCAGAGATTCTGCCGTGGCCATTTCTGGAGCAGATTCCCGAGGAATCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATGTGGACGTCATCGTaGCCTACCAGGAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITMWTSS*PTRRRA
Trigger: GGCCCGCCTCCTGGTAGGCAACGATGACGTCCACAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGGGGCAGTCCGGGTaGGTGGACGAATGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITRGQSG*VDECLA
Trigger: AGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCGCTGCCGGGCTTCTaGCTCTCGTCTCAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITSLPGF*LSSQGL
Trigger: CAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACAGCTGCAGTAGTACGTaGGCTGCATCCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: ALGDGWSTSMGDSSLRTDSCSST*AASSKP
Trigger: AGGCTTAGAGGATGCAGCCAACGTACTACTGCAGCT...GTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCCGACGTTGCTGCTaGTTGCTGTCTCCGCGCCCT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLRRCC*LLSPRP
Trigger: AGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAGGAGGCTCGTCCTaGATGTGTGCCAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPGGGSS*MCASWL
Trigger: GAGCCAGCTGGCACACATCAAGGACGAGCCTCCTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 90 bp CACACTGCTCCAACAGCTTCCCGAACCTTCCTGACCAAGTTGGCCTaGTGGTTTCTCTGGATCACTAACCCACTCAGGTCAGGCTGCTGG +
Preference number: 5 (lower is better)
Translates to: HTAPTASRTFLTKLA*WFLWITNPLRSGCW
Trigger: CCAGCAGCCTGACCTGAGTGGGTTAGTGATCCAGAGAAACCAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAGCTGTTGGAGCAGTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
CDS GCA 90 bp GTGAGTTTGGGTGTTTCAATGCATAGCTCACTCTCACTGCTGCGCTaGAAGATGGAGAGCAGACTGCGGATGACCCAGTGGCGGGTCTGG +
Preference number: 5 (lower is better)
Translates to: VSLGVSMHSSLSLLR*KMESRLRMTQWRVW
Trigger: CCAGACCCGCCACTGGGTCATCCGCAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAGTGAGCTATGCATTGAAACACCCAAACTCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 90 bp CCCTCACGTACCATTTGTATAATGGCATCAGCCTCAGCCTCCAGCTaGCGAACAGCTGCCTGGATGCTGCTAGCTGAGCCTAAACCGGAG +
Preference number: 5 (lower is better)
Translates to: PSRTICIMASASASS*RTAAWMLLAEPKPE
Trigger: CTCCGGTTTAGGCTCAGCTAGCAGCATCCAGGCAGCTGTTCGGCAGCTGGAGGCTGAGGCTGATGCCATTATACAAATGGTACGTGAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000474288.1
ENST00000612484.4
CDS GCA 90 bp AGGAACCTGCTCTGCATTTTGCCCTTCAGCTTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCAGGAGAGAGGGTTTCACATTGGGCT +
Preference number: 5 (lower is better)
Translates to: RNLLCILPFSLVVCG*SSGRPSGERVSHWA
Trigger: AGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS CCA 90 bp ACTGCTCCAACAGCTTCCCGAACCTTCCTGACCAAGTTGGCCTGCTaGTTTCTCTGGATCACTAACCCACTCAGGTCAGGCTGCTGGAGG +
Preference number: 5 (lower is better)
Translates to: TAPTASRTFLTKLAC*FLWITNPLRSGCWR
Trigger: CCTCCAGCAGCCTGACCTGAGTGGGTTAGTGATCCAGAGAAACCAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAGCTGTTGGAGCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
CDS CCA 90 bp GCAGTTGGCCACTTCTGTGAATATGTCTGGATTGCGGCATGCGGCTaGCCCAAGGACACGAAGGATGTAGTTGATCTCCCGAGAGCCGAG +
Preference number: 5 (lower is better)
Translates to: AVGHFCEYVWIAACG*PKDTKDVVDLPRAE
Trigger: CTCGGCTCTCGGGAGATCAACTACATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp AGGAACAGGCGGGCCAAGGCAGGGGTGTCCTTGTCTTCTGCATTCTaGGTATGTGGGAGCAGGTGGTCCAGAACAAAAGCTAGCACACTG +
Preference number: 5 (lower is better)
Translates to: RNRRAKAGVSLSSAF*VCGSRWSRTKASTL
Trigger: CAGTGTGCTAGCTTTTGTTCTGGACCACCTGCTCCCACATACCCAGAATGCAGAAGACAAGGACACCCCTGCCTTGGCCCGCCTGTTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TCCATATCCTCTAGGACACTACGGCGCAGGTCTGAGGGCAGAGTCTaGATGAAGGTCACAGGGTCCATAGGGGTGTCTGAGCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: SISSRTLRRRSEGRV*MKVTGSIGVSELAF
Trigger: GAATGCCAGCTCAGACACCCCTATGGACCCTGTGACCTTCATCCAGACTCTGCCCTCAGACCTGCGCCGTAGTGTCCTAGAGGATATGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CATTCTCAGCCATGTCAAACCTGCTCTGCATTTTGCCCTTCAGCTTaGTGGTCTGTGGCTGCTCCTCAGGCAGGCCATCAGGAGAGAGGG +
Preference number: 5 (lower is better)
Translates to: HSQPCQTCSAFCPSA*WSVAAPQAGHQERG
Trigger: CCCTCTCTCCTGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTTTGACATGGCTGAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CCA 90 bp CCTGTGGGGTTCCATCGGAGGCAATGGATTGAGTATCTTGAGCACTaGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGA +
Preference number: 5 (lower is better)
Translates to: PVGFHRRQWIEYLEH*EMAGPHPWVIPPSG
Trigger: TCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTCAATCCATTGCCTCCGATGGAACCCCACAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000463852.1
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGCAGCGGGGTCCTCTaGTCAGATCCCAGACGAGTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITSSGVL*SDPRRV
Trigger: CACTCGTCTGGGATCTGACAAGAGGACCCCGCTGCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCCTTGCCTTTCTGTTaGCCTTCCTCAGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPPLPFC*PSSEAR
Trigger: CCGGGCCTCTGAGGAAGGCAAACAGAAAGGCAAGGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCCTTGCCTTTCTGTTaGCCTTCCTCAGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITPLPFC*PSSEAR
Trigger: CCGGGCCTCTGAGGAAGGCAAACAGAAAGGCAAGGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGACAGGGTTCCTGCTaGGCTGGTAGCTGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITGQGSC*AGSCAL
Trigger: CAGAGCACAGCTACCAGCCAAGCAGGAACCCTGTCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCAGGCGCTGAGCTATTaGTGGAGGGGGCAGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVQALSY*WRGQSG
Trigger: CCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCGCTGCTGCTCGAGGTaGTATTCCCGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRCCSR*YSRSSA
Trigger: GGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGAGAGGGTTTCACATaGGGCTCGCCGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPREGFT*GSPLLL
Trigger: GAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp TGGCTAGACTCCGACGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGTATAATGGCATCAGCCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: WLDSDVAACCCLRAL*PSRTICIMASASAS
Trigger: GGAGGCTGAGGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGAGTCTAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CCTCTTGCCCTGTATCCTCTTCTCCTCGAGACCCCTCCTTCTCCTTaGTTAGTCTCTCTCGAATCACAGGTTCTCCTCGGAGGATGTGGC +
Preference number: 5 (lower is better)
Translates to: PLALYPLLLETPPSP*LVSLESQVLLGGCG
Trigger: GCCACATCCTCCGAGGAGAACCTGTGATTCGAGAGAGACTAAGCAAGGAGAAGGAGGGGTCTCGAGGAGAAGAGGATACAGGGCAAGAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TCAAACCTGCTCTGCATTTTGCCCTTCAGCTTGGTGGTCTGTGGCTaGTCCTCAGGCAGGCCATCAGGAGAGAGGGTTTCACATTGGGCT +
Preference number: 5 (lower is better)
Translates to: SNLLCILPFSLVVCG*SSGRPSGERVSHWA
Trigger: AGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGAGGAGCAGCCACAGACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTTTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS GCA 90 bp AAGCGAAGGAACTTCTGTGTGTCAGGGGGCAGGCTTGAGGAGATGTaGATAGATGAGGGCTCCCGGGAGAAGAATGGGTCAAGGGAGGAA +
Preference number: 5 (lower is better)
Translates to: KRRNFCVSGGRLEEM*IDEGSREKNGSREE
Trigger: TTCCTCCCTTGACCCATTCTTCTCCCGGGAGCCCTCATCTATGCACATCTCCTCAAGCCTGCCCCCTGACACACAGAAGTTCCTTCGCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp CAGGGGATTCAATGGGGCGGTGTAAGGGCTCCAGGGAGGAGAGGATaGAGTCCAACTGAAGGAGACCCTCTTGAAGGACTTTGGGTTCAT +
Preference number: 5 (lower is better)
Translates to: QGIQWGGVRAPGRRG*SPTEGDPLEGLWVH
Trigger: ATGAACCCAAAGTCCTTCAAGAGGGTCTCCTTCAGTTGGACTCCATCCTCTCCTCCCTGGAGCCCTTACACCGCCCCATTGAATCCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp AGCCTAGGGCTGCATCCATGGATACTGAGAGCCAGGAAAGCTGGTTaGAGCTCTTTGACTCCATCTTGTGTAGCAGGTCCAGGGGACGGT +
Preference number: 5 (lower is better)
Translates to: SLGLHPWILRARKAG*SSLTPSCVAGPGDG
Trigger: ACCGTCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCAGCCCTAGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp CTGCAGCCTAGGGCTGCATCCATGGATACTGAGAGCCAGGAAAGCTaGTTGGAGCTCTTTGACTCCATCTTGTGTAGCAGGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LQPRAASMDTESQES*LELFDSILCSRSRG
Trigger: TCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCAGCCCTAGGCTGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTGAATATGTCTGGATaGCGGCATGCGGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPVNMSG*RHAAGP
Trigger: TGGGCCAGCCGCATGCCGCAATCCAGACATATTCAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGACTCCTCTGGAGTaGAAGCCTCTCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPETPLE*KPLLGR
Trigger: CCTCCCAAGGAGAGGCTTCAACTCCAGAGGAGTCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTACTGGACCCCACGGTaGCCACTTAAGCGACTGGTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITYWTPR*PLKRLV
Trigger: CACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGGCTACAGGCCTTATaGCCCCTTTCCCGATCACTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPGLQAL*PLSRSL
Trigger: GAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGTATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCCCATTCAGTAGCAGCTaGAGAACAGTGTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: EYLEHWEMAGPHPWVIPPPFSSS*RTVSRV
Trigger: GACCCGGGACACTGTTCTCAAGCTGCTACTGAATGG...GGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CAA 90 bp ATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACATTAACCTGCTCTGCATTTaGCCCTTCAGCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: MGDSSLRTDASDWLDSDINLLCI*PFSLVV
Trigger: GACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTT...AATGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCCTGCCTGTCTGCTaGGCTTTCTTGTTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSLPVC*AFLLAR
Trigger: CCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGCCTGCCTGTCTGCTaGGCTTTCTTGTTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITSLPVC*AFLLAR
Trigger: CCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITLSPRP*TLTYHL
Trigger: CAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGAATGGATTGAGTATCTaGAGCACTGGGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: EMAGPHPWVIPPSGQTPLNGLSI*STGRWL
Trigger: CAGCCATCTCCCAGTGCTCAAGATACTCAATCCATT...CAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CAA 90 bp CACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGGCTAGACTCCGACATTaGTATAATGGCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: HWEMAGPHPWVIPPSGQTARLRH*YNGISL
Trigger: GAGGCTGATGCCATTATACAAATGTCGGAGTCTAGC...CGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS TCA 90 bp CAGAGTGCCAAGGGTCTCCTTGGACTCAGATGTAGCTGCATCAGTTaGAGATGGGGTTGTTGGGTAGCTGTCAGGCATAGGCGTCCCATC +
Preference number: 5 (lower is better)
Translates to: QSAKGLLGLRCSCIS*RWGCWVAVRHRRPI
Trigger: GATGGGACGCCTATGCCTGACAGCTACCCAACAACCCCATCTTCAACTGATGCAGCTACATCTGAGTCCAAGGAGACCCTTGGCACTCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp GACATAGAAGGCAGCTGGAGCTCCCGGCCACCCAAAGGTCGCTTCTaGGATGCCACAATTACCACATTCTCAGCCATGTCAAACCTGCTC +
Preference number: 5 (lower is better)
Translates to: DIEGSWSSRPPKGRF*DATITTFSAMSNLL
Trigger: GAGCAGGTTTGACATGGCTGAGAATGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGGTGGCCGGGAGCTCCAGCTGCCTTCTATGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS TCA 90 bp GGCATCATGCTAACCGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGTATAATGGCATCAGCCTCAGCCTCC +
Preference number: 5 (lower is better)
Translates to: GIMLTVAACCCLRAL*PSRTICIMASASAS
Trigger: GGAGGCTGAGGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGGTTAGCATGATGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474288.1
CDS GCA 90 bp CTCTGTGGCCTGCTCCATGGTGCTGGTGTTCAACAGTGCCTCCATTaGATGTTCCCTTGTGAAGCCCATGTCCATGAGCTGTTGCAGTTG +
Preference number: 5 (lower is better)
Translates to: LCGLLHGAGVQQCLH*MFPCEAHVHELLQL
Trigger: CAACTGCAACAGCTCATGGACATGGGCTTCACAAGGGAACATGCAATGGAGGCACTGTTGAACACCAGCACCATGGAGCAGGCCACAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CCTCCCATGATTGGAGGAGGGTGGGTTAAAAGGTACTCTGTGGCCTaGTCCATGGTGCTGGTGTTCAACAGTGCCTCCATTGCATGTTCC +
Preference number: 5 (lower is better)
Translates to: PPMIGGGWVKRYSVA*SMVLVFNSASIACS
Trigger: GGAACATGCAATGGAGGCACTGTTGAACACCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAACCCACCCTCCTCCAATCATGGGAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp AGCTCATTCTCAACCTGCATCTCTTGTGAACTGAGCACCTCAGGCTaGCCAGCAATCACCACTGAGTCGGTTTCAGCCTCCCCATCCATG +
Preference number: 5 (lower is better)
Translates to: SSFSTCISCELSTSG*PAITTESVSASPSM
Trigger: CATGGATGGGGAGGCTGAAACCGACTCAGTGGTGATTGCTGGGCAGCCTGAGGTGCTCAGTTCACAAGAGATGCAGGTTGAGAATGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TGCCACTGCTGGAGGACTGTGAGGAGCATGGGCTACAGGCCTTATTaGCCCTTTCCCGATCACTCTCACAGTTTGTTTCTTTGGTCCGCT +
Preference number: 5 (lower is better)
Translates to: CHCWRTVRSMGYRPY*PFPDHSHSLFLWSA
Trigger: AGCGGACCAAAGAAACAAACTGTGAGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 90 bp AGAAGGCAGCTGGAGCTCCCGGCCACCCAAAGGTCGCTTCTGAGATaGCACAATTACCACATTCTCAGCCATGTCAAACCTGCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: RRQLELPATQRSLLR*HNYHILSHVKPALH
Trigger: ATGCAGAGCAGGTTTGACATGGCTGAGAATGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGGTGGCCGGGAGCTCCAGCTGCCTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS GCA 90 bp ACCTCTGCTGAGCTCTTTAGACTTTTGCTCCCTGCAACTCCTCCTTaGTCCAGTCACGCTGGCCCTGGAATACACCATGCTCTCTTGTGG +
Preference number: 5 (lower is better)
Translates to: TSAELFRLLLPATPP*SSHAGPGIHHALLW
Trigger: CCACAAGAGAGCATGGTGTATTCCAGGGCCAGCGTGACTGGAGCAAGGAGGAGTTGCAGGGAGCAAAAGTCTAAAGAGCTCAGCAGAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS GCA 90 bp TCAGAGTCACTGGTAATCGGACCTCTGCTGAGCTCTTTAGACTTTTaGTCCCTGCAACTCCTCCTTGCTCCAGTCACGCTGGCCCTGGAA +
Preference number: 5 (lower is better)
Translates to: SESLVIGPLLSSLDF*SLQLLLAPVTLALE
Trigger: TTCCAGGGCCAGCGTGACTGGAGCAAGGAGGAGTTGCAGGGAGCAAAAGTCTAAAGAGCTCAGCAGAGGTCCGATTACCAGTGACTCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CCA 90 bp GGGAAAGTTCTGGACACCTCCAGGCAATTTGGCAGGCAGCGAATGTaGAGATTCAAGCACCGTGGTGGGATTCACCATCTTCTCCACCAG +
Preference number: 5 (lower is better)
Translates to: GKVLDTSRQFGRQRM*RFKHRGGIHHLLHQ
Trigger: CTGGTGGAGAAGATGGTGAATCCCACCACGGTGCTTGAATCTCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTGTCCAGAACTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GACATGCTGAGATCCCGAACAACTCCTCCCATGATTGGAGGAGGGTaGGTTAAAAGGTACTCTGTGGCCTGCTCCATGGTGCTGGTGTTC +
Preference number: 5 (lower is better)
Translates to: DMLRSRTTPPMIGGG*VKRYSVACSMVLVF
Trigger: GAACACCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAACCCACCCTCCTCCAATCATGGGAGGAGTTGTTCGGGATCTCAGCATGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp AAGGGCGATGCGGATACAGCAGTTGGCCACTTCTGTGAATATGTCTaGATTGCGGCATGCGGCTGGCCCAAGGACACGAAGGATGTAGTT +
Preference number: 5 (lower is better)
Translates to: KGDADTAVGHFCEYV*IAACGWPKDTKDVV
Trigger: AACTACATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGCTGTATCCGCATCGCCCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GGCTCATCCACAAAAAGTAGGACCAAGAGACAAGAAAGGGCTTCGTaGTCCAGAAGGAGCCGTCCTCGGAGGCGGAGGAGAGTATCTACA +
Preference number: 5 (lower is better)
Translates to: GSSTKSRTKRQERAS*SRRSRPRRRRRVST
Trigger: TGTAGATACTCTCCTCCGCCTCCGAGGACGGCTCCTTCTGGACCACGAAGCCCTTTCTTGTCTCTTGGTCCTACTTTTTGTGGATGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp AGTGTATCCAAAACGTGTCTGCAGACAACAGGAGCAGCTTGGGGATaGATGTGGACGGTGGAGCCACCGCTTGCATGCTTCTCGGTATGT +
Preference number: 5 (lower is better)
Translates to: SVSKTCLQTTGAAWG*MWTVEPPLACFSVC
Trigger: ACATACCGAGAAGCATGCAAGCGGTGGCTCCACCGTCCACATCCATCCCCAAGCTGCTCCTGTTGTCTGCAGACACGTTTTGGATACACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp GTCTGCTTGGCTTTCTTGTTAGCCCGGCGCGTGTCGTCCCGGAGCTaGATGATGACCTGTAGTACCCTCAAGAAGAACTTCTGGGTAGAT +
Preference number: 5 (lower is better)
Translates to: VCLAFLLARRVSSRS*MMTCSTLKKNFWVD
Trigger: ATCTACCCAGAAGTTCTTCTTGAGGGTACTACAGGTCATCATCCAGCTCCGGGACGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CCA 90 bp TGTAGTCTACCAGGACAGCAAAAGGCCCATCAGCAAGGTGGGTCGTaGACTGCCGTAGGATCTGGTTTAACACAGTGCGGTGAGTCTCTG +
Preference number: 5 (lower is better)
Translates to: CSLPGQQKAHQQGGS*TAVGSGLTQCGESL
Trigger: CAGAGACTCACCGCACTGTGTTAAACCAGATCCTACGGCAGTCCACGACCCACCTTGCTGATGGGCCTTTTGCTGTCCTGGTAGACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000480438.1
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCAGCGGGGTCCTCTaGTCAGATCCCAGACGAGTG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSSGVL*SDPRRV
Trigger: CACTCGTCTGGGATCTGACAAGAGGACCCCGCTGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACACCTCCAGGCAATTaGGCAGGCAGCGAATGTGGA +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPTPPGN*AGSECG
Trigger: TCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGGGGAGTAAACCCATaGAAGCCTGAGCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPRGVNP*KPELWV
Trigger: GACCCAGAGCTCAGGCTTCAATGGGTTTACTCCCCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCATCACCCATGTCTaGCAGGAGCTGGCCAACCTC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITIITHV*QELANL
Trigger: GAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCATCATCACCCATGTCTaGCAGGAGCTGGCCAACCTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPIITHV*QELANL
Trigger: GAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGAT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCCTTGCCTTTCTGTTaGCCTTCCTCAGAGGCCCGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPLPFC*PSSEAR
Trigger: CCGGGCCTCTGAGGAAGGCAAACAGAAAGGCAAGGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTGCAGCAGCCAGGCTaGCGAGGAACAGGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLQQPG*RGTGGP
Trigger: TGGCCCGCCTGTTCCTCGCAAGCCTGGCTGCTGCAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTGCCAAGGGTCTCCTaGGACTCAGATGTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITVPRVS*DSDVAA
Trigger: TGCAGCTACATCTGAGTCCAAGGAGACCCTTGGCAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCGCTGCCGGGCTTCTaGCTCTCGTCTCAGGGCTTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSLPGF*LSSQGL
Trigger: CAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGTTCTCATGGCTACTaGACCCACAGCTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPGSHGY*THSSCS
Trigger: CGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAACC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGTTCTCATGGCTACTaGACCCACAGCTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITGSHGY*THSSCS
Trigger: CGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAACC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp TATCTTGAGCACTGGGAGATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: YLEHWEMAGPHPWVIPPSTFAGD*LPLVVG
Trigger: TCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGT...GGAGGGAGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCATTCAGTAGCAGCTaGAGAACAGTGTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPPFSSS*RTVSRV
Trigger: GACCCGGGACACTGTTCTCAAGCTGCTACTGAATGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCCATTCAGTAGCAGCTaGAGAACAGTGTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITPFSSS*RTVSRV
Trigger: GACCCGGGACACTGTTCTCAAGCTGCTACTGAATGG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACGCTGCTGCTCGAGGTaGTATTCCCGCAGCTCGGCC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRCCSR*YSRSSA
Trigger: GGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGAGAGGGTTTCACATaGGGCTCGCCGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVREGFT*GSPLLL
Trigger: GAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCCGACGTTGCTGCTaGTTGCTGTCTCCGCGCCCT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLRRCC*LLSPRP
Trigger: AGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTCGGACAGGAGGCTaGCTCTCCCGCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSRTGG*LSRSVA
Trigger: TGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTCGGACAGGAGGCTaGCTCTCCCGCTCTGTGGCA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSRTGG*LSRSVA
Trigger: TGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGAGGAGGCTCGTCCTaGATGTGTGCCAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGGGSS*MCASWL
Trigger: GAGCCAGCTGGCACACATCAAGGACGAGCCTCCTCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGAGGTGGTTGGGGTaGCAGTGGGAAGATGGATTG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLRWLG*QWEDGL
Trigger: CAATCCATCTTCCCACTGCAACCCCAACCACCTCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGAGGTGGTTGGGGTaGCAGTGGGAAGATGGATTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITLRWLG*QWEDGL
Trigger: CAATCCATCTTCCCACTGCAACCCCAACCACCTCAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAAGCCGCCAACTGCTaGCGGATGGCTCCTGTCATT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPKAANC*RMAPVI
Trigger: AATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACACGAGCCGAAGACCTaGCCGCCGCCTCCGCGGCTA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAHEPKT*PPPPRL
Trigger: TAGCCGCGGAGGCGGCGGCAAGGTCTTCGGCTCGTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000342160.7
CDS TCA 90 bp CTTCGAGGGCAGCAAAGCCTTGCAGGGGTACCTTGGAAGTACCTGTaGCAAACTGGAGGAACTTGGCACGGTCAGCTTGATCGAAAGAAC +
Preference number: 5 (lower is better)
Translates to: LRGQQSLAGVPWKYL*QTGGTWHGQLDRKN
Trigger: GTTCTTTCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCTCGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS GCA 90 bp GAAGGGTGGCATGCAAAGTATCTGGGTCCACAGGGACTCCCAGCATaGTCACGCAGGCCCGGATTAAAACAGTCACCATATCTTCTGTCA +
Preference number: 5 (lower is better)
Translates to: EGWHAKYLGPQGLPA*SRRPGLKQSPYLLS
Trigger: TGACAGAAGATATGGTGACTGTTTTAATCCGGGCCTGCGTGAGCATGCTGGGAGTCCCTGTGGACCCAGATACTTTGCATGCCACCCTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp GATACAGCAGTTGGCCACTTCTGTGAATATGTCTGGATTGCGGCATaGGGCTGGCCCAAGGACACGAAGGATGTAGTTGATCTCCCGAGA +
Preference number: 5 (lower is better)
Translates to: DTAVGHFCEYVWIAA*GWPKDTKDVVDLPR
Trigger: TCTCGGGAGATCAACTACATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGCTGTATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CGCGTAAGTGACCGGTACTGCTGGTATACATCATCACCCATGTCTTaGAGGAGCTGGCCAACCTCTTGGGTCATAACCCCAGGTTTAGGA +
Preference number: 5 (lower is better)
Translates to: RVSDRYCWYTSSPMS*RSWPTSWVITPGLG
Trigger: TCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGATGTATACCAGCAGTACCGGTCACTTACGCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp GGCGATCTGTGGACCTGTCATCTCGATGGATCTGAAACTTCTGAATaGCATTCATGCCTTCGAGGGCAGCAAAGCCTTGCAGGGGTACCT +
Preference number: 5 (lower is better)
Translates to: GDLWTCHLDGSETSE*HSCLRGQQSLAGVP
Trigger: AGGTACCCCTGCAAGGCTTTGCTGCCCTCGAAGGCATGAATGGCATTCAGAAGTTTCAGATCCATCGAGATGACAGGTCCACAGATCGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CCA 90 bp GTGAGACGAGTTGTTGAAGAGCCACTGCCCAGTGTCAGAGAACTGTaGTCTGCATGGCGCACCATCAGTGGATGGGTGGTAGGGATATTT +
Preference number: 5 (lower is better)
Translates to: VRRVVEEPLPSVREL*SAWRTISGWVVGIF
Trigger: AAATATCCCTACCACCCATCCACTGATGGTGCGCCATGCAGACCACAGTTCTCTGACACTGGGCAGTGGCTCTTCAACAACTCGTCTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGACTGCCAGCACCACTaGCATATCAGAGGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITDCQHH*HIRGSQ
Trigger: TTGGCTTCCTCTGATATGCAAGTGGTGCTGGCAGTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTAGCATCAGCAACATaGCCTGCGCAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITVASAT*PAQASS
Trigger: AGAACTGGCTTGCGCAGGCAATGTTGCTGATGCTAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCAGATGGTAGGCTGTTaGGGGTACACAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPQMVGC*GYTERG
Trigger: TCCTCTCTCTGTGTACCCCAAACAGCCTACCATCTG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGTTGCTGGTTGACTaGAGGTTCCCGGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLLLVD*RFPAGA
Trigger: GGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGTTGCTGGTTGACTaGAGGTTCCCGGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLLLVD*RFPAGA
Trigger: GGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCAAACCAGCGCCAGTaGTTGCTGTTGGATTGCAGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSNQRQ*LLLDCR
Trigger: CCTGCAATCCAACAGCAACAACTGGCGCTGGTTTGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAACATCATGGCATATTaGTGGTCCCGGGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPNIMAY*WSRVSL
Trigger: GAGGCTCACCCGGGACCACAAATATGCCATGATGTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACACTGCAGTCCTCTTaGATCAGTTCAGACTGGCCC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITTLQSS*ISSDWP
Trigger: GGGCCAGTCTGAACTGATCAAAGAGGACTGCAGTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAGGCAGGGGTGTCCTaGTCTTCTGCATTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITKAGVS*SSAFWV
Trigger: TACCCAGAATGCAGAAGACAAGGACACCCCTGCCTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTGCAGCAGCCAGGCTaGCGAGGAACAGGCGGGCCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALQQPG*RGTGGP
Trigger: TGGCCCGCCTGTTCCTCGCAAGCCTGGCTGCTGCAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAAGCTTGGCTGAGGTaGGAAGGAGCTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPEAWLR*EGASSI
Trigger: GATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAAGCTTGGCTGAGGTaGGAAGGAGCTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITEAWLR*EGASSI
Trigger: GATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATGTGGACGTCATCGTaGCCTACCAGGAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKMWTSS*PTRRRA
Trigger: GGCCCGCCTCCTGGTAGGCAACGATGACGTCCACAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGACAGGGTTCCTGCTaGGCTGGTAGCTGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGQGSC*AGSCAL
Trigger: CAGAGCACAGCTACCAGCCAAGCAGGAACCCTGTCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTTCTGCTTCCCCACTaGGCCTTGTGGGACCCAATT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPFLLPH*ALWDPI
Trigger: AATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTTCTGCTTCCCCACTaGGCCTTGTGGGACCCAATT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITFLLPH*ALWDPI
Trigger: AATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTCTTTGACTCCATCTaGTGTAGCAGGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLFDSI*CSRSRG
Trigger: TCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGCTACAGGCCTTATaGCCCCTTTCCCGATCACTC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGLQAL*PLSRSL
Trigger: GAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGACTTCACGGAGTTCTaGCCTTTCCGGCTGACATTC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITDFTEF*PFRLTF
Trigger: GAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPTFAGD*LPLVVG
Trigger: TCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITTFAGD*LPLVVG
Trigger: TCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAGCTGCAGTAGTACGTaGGCTGCATCCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSCSST*AASSKP
Trigger: AGGCTTAGAGGATGCAGCCAACGTACTACTGCAGCT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GATGGCTGGTCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACCAGCAGGGTACCTATTaGTTTACAAAGGGTATAACC +
Preference number: 5 (lower is better)
Translates to: DGWSTSMGDSSLRTDASDQQGTY*FTKGIT
Trigger: GGTTATACCCTTTGTAAACAAATAGGTACCCTGCTG...GTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGACCAGCCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000468322.2
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGAGAGGGTTTCACATaGGGCTCGCCGCTGCTGCTC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFREGFT*GSPLLL
Trigger: GAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAACCTGCTCTGCATTTaGCCCTTCAGCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITNLLCI*PFSLVV
Trigger: GACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTCTGCTTGGCTTTCTaGTTAGCCCGGCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVCLAF*LARRVS
Trigger: CGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCGACGTTGCTGCTTGTaGCTGTCTCCGCGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSRRCCL*LSPRPL
Trigger: CAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCGACGTTGCTGCTTGTaGCTGTCTCCGCGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRRCCL*LSPRPL
Trigger: CAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTTGGCACGGTCAGCTaGATCGAAAGAACGCAATGC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITLGTVS*IERTQC
Trigger: GCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCCTTGCAGGGGTACCTaGGAAGTACCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPPCRGT*EVPVTN
Trigger: GTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp TTATCTGGCTCCCAAACTGGCCATCAGGCACCAAAACCAAAAATCTaGCCCTGTCACTCCTCCTTAAACACCCTGGCCTCACTCGCCCAT +
Preference number: 5 (lower is better)
Translates to: LSGSQTGHQAPKPKI*PCHSSLNTLASLAH
Trigger: ATGGGCGAGTGAGGCCAGGGTGTTTAAGGAGGAGTGACAGGGTCAGATTTTTGGTTTTGGTGCCTGATGGCCAGTTTGGGAGCCAGATAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS GCA 90 bp AAATCACAGCCAATCATACTCATCCTGGTGGGAAATTCCCCACACTaGTCCAACAGCTTCCCGAACCTTCCTGACCAAGTTGGCCTGCTG +
Preference number: 5 (lower is better)
Translates to: KSQPIILILVGNSPH*SNSFPNLPDQVGLL
Trigger: CAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAGCTGTTGGAGCAGTGTGGGGAATTTCCCACCAGGATGAGTATGATTGGCTGTGATTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
CDS GCA 90 bp GGACAGTGCTTTCCCACACCAGGGAACAGTATAACTGGCTCAGCTTaGTCAAAACACTCAGACCCAATTGAGAGCCCCACTGGTTTACGG +
Preference number: 5 (lower is better)
Translates to: GQCFPTPGNSITGSA*SKHSDPIESPTGLR
Trigger: CCGTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGTTTTGAGCAAGCTGAGCCAGTTATACTGTTCCCTGGTGTGGGAAAGCACTGTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TCATCCTCAGGGTCCAGGATATTCATGGAATCTTCTCGGTTGGCCTaGAAGGTGGAAGCTTGGCTGAGGTTGGAAGGAGCTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: SSSGSRIFMESSRLA*KVEAWLRLEGASSI
Trigger: GATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATATCCTGGACCCTGAGGATGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GTCTCTCTCGAATCACAGGTTCTCCTCGGAGGATGTGGCATAGAATaGCCAGCATCGATTCAGCCATTCGTCCACCATATACCTTCAGGG +
Preference number: 5 (lower is better)
Translates to: VSLESQVLLGGCGIE*PASIQPFVHHIPSG
Trigger: CCCTGAAGGTATATGGTGGACGAATGGCTGAATCGATGCTGGCCATTCTATGCCACATCCTCCGAGGAGAACCTGTGATTCGAGAGAGAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GCAGGGGTGTCCTTGTCTTCTGCATTCTGGGTATGTGGGAGCAGGTaGTCCAGAACAAAAGCTAGCACACTGCAGTCCTCTTTGATCAGT +
Preference number: 5 (lower is better)
Translates to: AGVSLSSAFWVCGSR*SRTKASTLQSSLIS
Trigger: ACTGATCAAAGAGGACTGCAGTGTGCTAGCTTTTGTTCTGGACCACCTGCTCCCACATACCCAGAATGCAGAAGACAAGGACACCCCTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACCTTCCTGACCAAGTaGGCCTGCTGGTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTFLTK*ACWFLW
Trigger: CCAGAGAAACCAGCAGGCCAACTTGGTCAGGAAGGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTCCTTTTCTCAATTTaGACCTCGGCCCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPVLFSI*TSAPGS
Trigger: AGATCCTGGGGCCGAGGTCAAAATTGAGAAAAGGAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACATCTGTCAATCCATaGTCCTGGAGTGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPTSVNP*SWSEES
Trigger: GCTCTCCTCACTCCAGGACAATGGATTGACAGATGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGAAGGAGACCCTCTaGAAGGACTTTGGGTTCATG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLKETL*KDFGFM
Trigger: CATGAACCCAAAGTCCTTCAAGAGGGTCTCCTTCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCATGTCCATGAGCTGTaGCAGTTGTTGCTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITHVHEL*QLLLVD
Trigger: GTCAACCAGCAACAACTGCAACAGCTCATGGACATG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCATGTCCATGAGCTGTaGCAGTTGTTGCTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPHVHEL*QLLLVD
Trigger: GTCAACCAGCAACAACTGCAACAGCTCATGGACATG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCTGCCCTTTGATCCATaGGAATATCCTGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLPFDP*EYPVPE
Trigger: CTCTGGGACAGGATATTCCAATGGATCAAAGGGCAG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTGCCCTTTGATCCATaGGAATATCCTGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITLPFDP*EYPVPE
Trigger: CTCTGGGACAGGATATTCCAATGGATCAAAGGGCAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCGGTTTTTGTGTCACTaGTTGTCAGGGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPRFLCH*LSGEEQ
Trigger: CTGCTCTTCCCCTGACAACAAGTGACACAAAAACCG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCGGTTTTTGTGTCACTaGTTGTCAGGGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITRFLCH*LSGEEQ
Trigger: CTGCTCTTCCCCTGACAACAAGTGACACAAAAACCG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGATCTCCCCGATTTTaGTTTCCTCCAGGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPGSPRF*FPPGLS
Trigger: AGACAAGCCTGGAGGAAACAAAAATCGGGGAGATCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGGATCTCCCCGATTTTaGTTTCCTCCAGGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITGSPRF*FPPGLS
Trigger: AGACAAGCCTGGAGGAAACAAAAATCGGGGAGATCC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAGACTCCTCTGGAGTaGAAGCCTCTCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFETPLE*KPLLGR
Trigger: CCTCCCAAGGAGAGGCTTCAACTCCAGAGGAGTCTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGCATCCTGCTCAGACTaGTTCTTGCTAGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPASCSD*FLLEAL
Trigger: GAGTGCTTCTAGCAAGAACAAGTCTGAGCAGGATGC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCAGCATCGAGAACTTaGCATTCTTCTGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSASRT*HSSVQR
Trigger: CCGCTGGACAGAAGAATGCAAAGTTCTCGATGCTGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGGGGCAGTCCGGGTaGGTGGACGAATGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRGQSG*VDECLA
Trigger: AGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCTCGTCTCAGGGCTaGAGCCTCAGCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLSSQG*SLSCNV
Trigger: GACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTACTGGACCCCACGGTaGCCACTTAAGCGACTGGTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSYWTPR*PLKRLV
Trigger: CACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGTTCTCATGGCTACTaGACCCACAGCTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVGSHGY*THSSCS
Trigger: CGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAACC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTCTGCTTGGCTTTCTaGTTAGCCCGGCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVCLAF*LARRVS
Trigger: CGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGCCTGCCTGTCTGCTaGGCTTTCTTGTTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSLPVC*AFLLAR
Trigger: CCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGCCTGCCTGTCTGCTaGGCTTTCTTGTTAGCCCGG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSLPVC*AFLLAR
Trigger: CCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLSPRP*TLTYHL
Trigger: CAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGGAGGAGGCTCGTCCTaGATGTGTGCCAGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVGGGSS*MCASWL
Trigger: GAGCCAGCTGGCACACATCAAGGACGAGCCTCCTCC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTGAGGTGGTTGGGGTaGCAGTGGGAAGATGGATTG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLRWLG*QWEDGL
Trigger: CAATCCATCTTCCCACTGCAACCCCAACCACCTCAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCACTCCAGAAGACGGTaGTCATATACAGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITHSRRR*SYTALA
Trigger: GGCCAAAGCTGTATATGACAACCGTCTTCTGGAGTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTGTTACCAAGATGTaGGCCCCATTGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSVTKM*APLGLR
Trigger: CCTCAAACCCAATGGGGCCAACATCTTGGTAACAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAAGCCGCCAACTGCTaGCGGATGGCTCCTGTCATT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKAANC*RMAPVI
Trigger: AATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp GGTTCACAATCCGGGAAAGTGTTTCCAAAGGCTTCAGAGCAGCATTaGCTGTGTTGGCCATGTTGGGACTGGACAGGTCTAAGCTGTGAG +
Preference number: 5 (lower is better)
Translates to: GSQSGKVFPKASEQH*LCWPCWDWTGLSCE
Trigger: CTCACAGCTTAGACCTGTCCAGTCCCAACATGGCCAACACAGTCAATGCTGCTCTGAAGCCTTTGGAAACACTTTCCCGGATTGTGAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp GATGCAAGTAAAGGCTGCTTTCTGAGTTACCACAAGGAAGCGCAGTaGACTGAACTGGGGAAAGTTCTGGACACCTCCAGGCAATTTGGC +
Preference number: 5 (lower is better)
Translates to: DASKGCFLSYHKEAQ*TELGKVLDTSRQFG
Trigger: GCCAAATTGCCTGGAGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCGCTTCCTTGTGGTAACTCAGAAAGCAGCCTTTACTTGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp ACCCTGCACCATTGTAGTGAATTGGACCGTGTATCTTCTTCGGCCTaGAGTGAATCGCACGCTTGTCTCTCCAGATTTCCAGGCAGAATC +
Preference number: 5 (lower is better)
Translates to: TLHHCSELDRVSSSA*SESHACLSRFPGRI
Trigger: GATTCTGCCTGGAAATCTGGAGAGACAAGCGTGCGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATGGTGCAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218328.12
CDS CCA 90 bp AAGGGGATCAGAACTTCTCCTCCTCCGCATGGCTGGGAGGTAATCTaGAGACAGAAGAACTTTGAAGAGGCGTTCAAAAGGCTGACACTG +
Preference number: 5 (lower is better)
Translates to: KGIRTSPPPHGWEVI*RQKNFEEAFKRLTL
Trigger: CAGTGTCAGCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAAGTTCTGATCCCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000489876.1
ENST00000612484.4
CDS CCA 90 bp TGCAGTATCCCCAAGGGGATCAGAACTTCTCCTCCTCCGCATGGCTaGGAGGTAATCTGGAGACAGAAGAACTTTGAAGAGGCGTTCAAA +
Preference number: 5 (lower is better)
Translates to: CSIPKGIRTSPPPHG*EVIWRQKNFEEAFK
Trigger: TTTGAACGCCTCTTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAAGTTCTGATCCCCTTGGGGATACTGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000489876.1
ENST00000612484.4
CDS CCA 90 bp ATCATGCGGGTACTCTTCAGTTCTGCAAACATCATGGCATATTTGTaGTCCCGGGTGAGCCTCAGACAGAGACGAAGGGTGGCATGCAAA +
Preference number: 5 (lower is better)
Translates to: IMRVLFSSANIMAYL*SRVSLRQRRRVACK
Trigger: TTTGCATGCCACCCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAACTGAAGAGTACCCGCATGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp AGGATATTCATGGAATCTTCTCGGTTGGCCTGCAAGGTGGAAGCTTaGCTGAGGTTGGAAGGAGCTTCATCCATCAGCACGTCCTCTTGT +
Preference number: 5 (lower is better)
Translates to: RIFMESSRLACKVEA*LRLEGASSISTSSC
Trigger: ACAAGAGGACGTGCTGATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATATCCT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CCAGTTTTACCAATAAGTCCCAGAAGTCTGTGCAAATGCCACTGCTaGAGGACTGTGAGGAGCATGGGCTACAGGCCTTATTGCCCCTTT +
Preference number: 5 (lower is better)
Translates to: PVLPISPRSLCKCHC*RTVRSMGYRPYCPF
Trigger: AAAGGGGCAATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCTGGGACTTATTGGTAAAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp GATTCCTCCCTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACTaGATAAAAGGGAGACAAAAATCACATAAGGGTGCAACTCTGCTT +
Preference number: 5 (lower is better)
Translates to: DSSLRTDASDWLDSD*IKGRQKSHKGATLL
Trigger: AAGCAGAGTTGCACCCTTATGTGATTTTTGTCTCCCTTTTATCCAGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS CCA 90 bp TCCACATCCATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTaGCTAGACTCCGACTGGATAAAAGGGAGACAAAAATCACATAAG +
Preference number: 5 (lower is better)
Translates to: STSMGDSSLRTDASD*LDSDWIKGRQKSHK
Trigger: CTTATGTGATTTTTGTCTCCCTTTTATCCAGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCATGGATGTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGGAGACAGAAGAACTTaGAAGAGGCGTTCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPGDRRT*KRRSKG
Trigger: GCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCATCTGCCTTCTGGATaGATGGCTTCTGACAGATGT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPHLPSG*MASDRC
Trigger: ACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGTGTCAATATGGATTaGCAGACACCTGCAACAGCC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITSVNMD*QTPATA
Trigger: GGCTGTTGCAGGTGTCTGCAAATCCATATTGACACT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACACCTCCAGGCAATTaGGCAGGCAGCGAATGTGGA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTPPGN*AGSECG
Trigger: TCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCAAACCAGCGCCAGTaGTTGCTGTTGGATTGCAGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSNQRQ*LLLDCR
Trigger: CCTGCAATCCAACAGCAACAACTGGCGCTGGTTTGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGCTGGCCAACCTCTaGGGTCATAACCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSELANL*GHNPRF
Trigger: AAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGTAGGCATTAAAGGTTaGCTGCCCTTGCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITVGIKG*LPLPFC
Trigger: ACAGAAAGGCAAGGGCAGCAAACCTTTAATGCCTAC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGTAGGCATTAAAGGTTaGCTGCCCTTGCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPVGIKG*LPLPFC
Trigger: ACAGAAAGGCAAGGGCAGCAAACCTTTAATGCCTAC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGCAGCATTGACTGTGTaGGCCATGTTGGGACTGGAC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSAALTV*AMLGLD
Trigger: GTCCAGTCCCAACATGGCCAACACAGTCAATGCTGC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTGCTCAGACTTGTTCTaGCTAGAAGCACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITCSDLF*LEALLL
Trigger: CAGCAAGAGTGCTTCTAGCAAGAACAAGTCTGAGCA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATGGAATCTTCTCGGTaGGCCTGCAAGGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVMESSR*ACKVEA
Trigger: AGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGTGGACGTCATCGTaGCCTACCAGGAGGCGGGCC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAMWTSS*PTRRRA
Trigger: GGCCCGCCTCCTGGTAGGCAACGATGACGTCCACAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCAGTTGAAGATGGGGTaGTTGGGTAGCTGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVQLKMG*LGSCQA
Trigger: TGCCTGACAGCTACCCAACAACCCCATCTTCAACTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTGCCAAGGGTCTCCTaGGACTCAGATGTAGCTGCA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVPRVS*DSDVAA
Trigger: TGCAGCTACATCTGAGTCCAAGGAGACCCTTGGCAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGTGGGGTTGGGAGTGTaGGTTGCTGTTGTGAGGATT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVVGLGV*VAVVRI
Trigger: AATCCTCACAACAGCAACCAACACTCCCAACCCCAC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTTCCCCACTTGGCCTaGTGGGACCCAATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLPHLA*WDPIPL
Trigger: CAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCTTCTTCACTGCTTGTaGAAGGCAACGGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITLLHCL*KATALL
Trigger: TAGAAGAGCCGTTGCCTTCAACAAGCAGTGAAGAAG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGGGGCAGTCCGGGTaGGTGGACGAATGCCTAGCT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQARGQSG*VDECLA
Trigger: AGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATACTGGACCCCACGGTaGCCACTTAAGCGACTGGTG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKYWTPR*PLKRLV
Trigger: CACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTCTTTGACTCCATCTaGTGTAGCAGGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLFDSI*CSRSRG
Trigger: TCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACGGTGGAGCCACCGCTaGCATGCTTCTCGGTATGTT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRWSHR*HASRYV
Trigger: AACATACCGAGAAGCATGCAAGCGGTGGCTCCACCG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATCACTCTCACAGTTaGTTTCTTTGGTCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPDHSHS*FLWSAA
Trigger: AGCAGCGGACCAAAGAAACAAACTGTGAGAGTGATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGATCACTCTCACAGTTaGTTTCTTTGGTCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITDHSHS*FLWSAA
Trigger: AGCAGCGGACCAAAGAAACAAACTGTGAGAGTGATC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGGGCTACAGGCCTTATaGCCCCTTTCCCGATCACTC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKGLQAL*PLSRSL
Trigger: GAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGCTGCAGTAGTACGTaGGCTGCATCCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSCSST*AASSKP
Trigger: AGGCTTAGAGGATGCAGCCAACGTACTACTGCAGCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTCTGCTTGGCTTTCTaGTTAGCCCGGCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVCLAF*LARRVS
Trigger: CGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACCCTCACGTACCATTaGTATAATGGCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPTLTYH*YNGISL
Trigger: GAGGCTGATGCCATTATACAAATGGTACGTGAGGGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGACGTTGCTGCTTGTaGCTGTCTCCGCGCCCTTTG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRRCCL*LSPRPL
Trigger: CAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCCGACGTTGCTGCTaGTTGCTGTCTCCGCGCCCT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALRRCC*LLSPRP
Trigger: AGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACAAACTCCAAACTCTaGGACCTCAGTGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPTNSKL*DLSAEG
Trigger: ACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCACAAACTCCAAACTCTaGGACCTCAGTGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITTNSKL*DLSAEG
Trigger: ACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTGT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAAAGCCGCCAACTGCTaGCGGATGGCTCCTGTCATT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSKAANC*RMAPVI
Trigger: AATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCTTGCAGGGGTACCTaGGAAGTACCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPCRGT*EVPVTN
Trigger: GTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp AGTAACTTGATGATGGCAGTCGTTGCATCTGTTTTAAGGGTGGGCTaGTGTCTCATGAGCTCATCGACAGCACTCCCCAGGTTGGATGCA +
Preference number: 5 (lower is better)
Translates to: SNLMMAVVASVLRVG*CLMSSSTALPRLDA
Trigger: TGCATCCAACCTGGGGAGTGCTGTCGATGAGCTCATGAGACATCAGCCCACCCTTAAAACAGATGCAACGACTGCCATCATCAAGTTACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp TACTCTTCAGTTCTGCAAACATCATGGCATATTTGTGGTCCCGGGTaGGCCTCAGACAGAGACGAAGGGTGGCATGCAAAGTATCTGGGT +
Preference number: 5 (lower is better)
Translates to: YSSVLQTSWHICGPG*ASDRDEGWHAKYLG
Trigger: ACCCAGATACTTTGCATGCCACCCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAACTGAAGAGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp TATTCATGGAATCTTCTCGGTTGGCCTGCAAGGTGGAAGCTTGGCTaGGGTTGGAAGGAGCTTCATCCATCAGCACGTCCTCTTGTGATT +
Preference number: 5 (lower is better)
Translates to: YSWNLLGWPARWKLG*GWKELHPSARPLVI
Trigger: AATCACAAGAGGACGTGCTGATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp CAGCGCTCACTGGCACTGACTTCACGGAGTTCTTGCCTTTCCGGCTaGCATTCATGTTGTCCAGTTTTACCAATAAGTCCCAGAAGTCTG +
Preference number: 5 (lower is better)
Translates to: QRSLALTSRSSCLSG*HSCCPVLPISPRSL
Trigger: CAGACTTCTGGGACTTATTGGTAAAACTGGACAACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 90 bp AACCTGCACCATTGTAGTGAATTGGACCGTGTATCTTCTTCGGCCTaGAGTGAATCGCACGCTTGTCTCTCCAGATTTCCAGGCAGAATC +
Preference number: 5 (lower is better)
Translates to: NLHHCSELDRVSSSA*SESHACLSRFPGRI
Trigger: GATTCTGCCTGGAAATCTGGAGAGACAAGCGTGCGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATGGTGCAGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CGTTCCTGGGCCCTTACAATCGATTCTTCATTTCTTCGGGGGATTTaGGATGCAGCTCACGATAGGAGTCTTCAAACACATGGTCACGAC +
Preference number: 5 (lower is better)
Translates to: RSWALTIDSSFLRGI*DAAHDRSLQTHGHD
Trigger: GTCGTGACCATGTGTTTGAAGACTCCTATCGTGAGCTGCATCGCAAATCCCCCGAAGAAATGAAGAATCGATTGTAAGGGCCCAGGAACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480438.1
CDS CCA 90 bp TCCTTGCTTAGTCTCTCTCGAATCACAGGTTCTCCTCGGAGGATGTaGCATAGAATGGCCAGCATCGATTCAGCCATTCGTCCACCATAT +
Preference number: 5 (lower is better)
Translates to: SLLSLSRITGSPRRM*HRMASIDSAIRPPY
Trigger: ATATGGTGGACGAATGGCTGAATCGATGCTGGCCATTCTATGCCACATCCTCCGAGGAGAACCTGTGATTCGAGAGAGACTAAGCAAGGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp AGGTCACACACACGGTATACTGTGTCTGGCAGCTCATCAAGAAGGTaGAAGCAGCCTGGCAACATAGTATCTGTGAAAGTGTGGAGCTCA +
Preference number: 5 (lower is better)
Translates to: RSHTRYTVSGSSSRR*KQPGNIVSVKVWSS
Trigger: TGAGCTCCACACTTTCACAGATACTATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCTGCCAGACACAGTATACCGTGTGTGTGACCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GACCGGTACTGCTGGTATACATCATCACCCATGTCTTGCAGGAGCTaGCCAACCTCTTGGGTCATAACCCCAGGTTTAGGATCAGATTTA +
Preference number: 5 (lower is better)
Translates to: DRYCWYTSSPMSCRS*PTSWVITPGLGSDL
Trigger: TAAATCTGATCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGATGTATACCAGCAGTACCGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TCCCGGAGCTGGATGATGACCTGTAGTACCCTCAAGAAGAACTTCTaGGTAGATGTCTTGGATGTCAACATGGACATAGAAGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: SRSWMMTCSTLKKNF*VDVLDVNMDIEGSW
Trigger: CCAGCTGCCTTCTATGTCCATGTTGACATCCAAGACATCTACCCAGAAGTTCTTCTTGAGGGTACTACAGGTCATCATCCAGCTCCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAACCTTCCTGACCAAGTaGGCCTGCTGGTTTCTCTGG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKTFLTK*ACWFLW
Trigger: CCAGAGAAACCAGCAGGCCAACTTGGTCAGGAAGGT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000262854.11
ENST00000342160.7
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGAGAAGCATTTTCAGTaGCTCTCTTTCTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPEKHFQ*LSFWPI
Trigger: GATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCTC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGAGAAGCATTTTCAGTaGCTCTCTTTCTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITEKHFQ*LSFWPI
Trigger: GATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGACTGCCAGCACCACTaGCATATCAGAGGAAGCCAA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSDCQHH*HIRGSQ
Trigger: TTGGCTTCCTCTGATATGCAAGTGGTGCTGGCAGTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGCAGCGGGGTCCTCTaGTCAGATCCCAGACGAGTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQASSGVL*SDPRRV
Trigger: CACTCGTCTGGGATCTGACAAGAGGACCCCGCTGCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATAATACTGCTGAGTTaGGGAGTTCTCTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITIILLS*GVLSKW
Trigger: CCACTTGGAGAGAACTCCCAAACTCAGCAGTATTAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTGCCATATCCAGGTaGGTGATAAGGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAAISR*VIRSTT
Trigger: AGTGGTTGACCTTATCACCAACCTGGATATGGCAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAGTCCACTATGGGATaGAAAAGCTGCCATATCCAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPKSTMG*KSCHIQ
Trigger: CTGGATATGGCAGCTTTTCAATCCCATAGTGGACTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCATTTCCTCTCCTTCTaGTGTAGTATTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPHFLSF*CSIGSL
Trigger: CAGAGACCCAATACTACACAAGAAGGAGAGGAAATG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAGTCAATGGGCAGATaGGGAAGACCCAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITKSMGR*GRPKMV
Trigger: TACCATTTTGGGTCTTCCCAATCTGCCCATTGACTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGATGGTAGGCTGTTaGGGGTACACAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQMVGC*GYTERG
Trigger: TCCTCTCTCTGTGTACCCCAAACAGCCTACCATCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGTTGCTGGTTGACTaGAGGTTCCCGGCGGGAGCC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALLLVD*RFPAGA
Trigger: GGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAGTGTGGAGCTCATCTaGTTCCAACGGGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSVELI*FQRVSI
Trigger: GATGCTGACCCGTTGGAACAAGATGAGCTCCACACT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCACCTGATTGACTACTaGCTTCAGAATCATGTCACG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITHLIDY*LQNHVT
Trigger: CGTGACATGATTCTGAAGCAAGTAGTCAATCAGGTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTTTTGTGTCACTTGTaGTCAGGGGAAGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITFLCHL*SGEEQL
Trigger: AAGCTGCTCTTCCCCTGACAACAAGTGACACAAAAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCGCCAGTTGTTGCTGTaGGATTGCAGGTACTTAGTC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRQLLL*DCRYLV
Trigger: GACTAAGTACCTGCAATCCAACAGCAACAACTGGCG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAACCAGCGCCAGTTGTaGCTGTTGGATTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNQRQL*LLDCRY
Trigger: GTACCTGCAATCCAACAGCAACAACTGGCGCTGGTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTCCTTTTCAGTGTTaGTACTCTCTAGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSPFQC*YSLGPK
Trigger: CTTTGGCCCTAGAGAGTACAAACACTGAAAAGGAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACATCATGGCATATTaGTGGTCCCGGGTGAGCCTC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNIMAY*WSRVSL
Trigger: GAGGCTCACCCGGGACCACAAATATGCCATGATGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAGCTGGCCAACCTCTaGGGTCATAACCCCAGGTTT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKELANL*GHNPRF
Trigger: AAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATCATCACCCATGTCTaGCAGGAGCTGGCCAACCTC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIITHV*QELANL
Trigger: GAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACACTGCAGTCCTCTTaGATCAGTTCAGACTGGCCC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTLQSS*ISSDWP
Trigger: GGGCCAGTCTGAACTGATCAAAGAGGACTGCAGTGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAAAGCCGAATGATGTaGTTCATGCCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITKSRMM*FMPLCW
Trigger: CCAGCACAATGGCATGAACAACATCATTCGGCTTTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGCTTCAGAGCAGCATaGACTGTGTTGGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGFRAA*TVLAML
Trigger: CAACATGGCCAACACAGTCAATGCTGCTCTGAAGCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGCTTCAGAGCAGCATaGACTGTGTTGGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGFRAA*TVLAML
Trigger: CAACATGGCCAACACAGTCAATGCTGCTCTGAAGCC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATCTTGAGAGGCTCCTaGGGCATCCTGCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSILRGS*GILLRL
Trigger: AAGTCTGAGCAGGATGCCCAAGGAGCCTCTCAAGAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATCTTGAGAGGCTCCTaGGGCATCCTGCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFILRGS*GILLRL
Trigger: AAGTCTGAGCAGGATGCCCAAGGAGCCTCTCAAGAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGACAGGGTTCCTGCTaGGCTGGTAGCTGTGCTCTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAGQGSC*AGSCAL
Trigger: CAGAGCACAGCTACCAGCCAAGCAGGAACCCTGTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCAGCATCGAGAACTTaGCATTCTTCTGTCCAGCGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSASRT*HSSVQR
Trigger: CCGCTGGACAGAAGAATGCAAAGTTCTCGATGCTGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTGGGGTTGGGAGTGTaGGTTGCTGTTGTGAGGATT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVGLGV*VAVVRI
Trigger: AATCCTCACAACAGCAACCAACACTCCCAACCCCAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTTCCCCACTTGGCCTaGTGGGACCCAATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLPHLA*WDPIPL
Trigger: CAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTTCTGCTTCCCCACTaGGCCTTGTGGGACCCAATT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSFLLPH*ALWDPI
Trigger: AATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATAACTCCATCTGAGTaGTTTCTGCTTCCCCACTTG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITITPSE*FLLPHL
Trigger: CAAGTGGGGAAGCAGAAACAACTCAGATGGAGTTAT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCTTTGACTCCATCTaGTGTAGCAGGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLFDSI*CSRSRG
Trigger: TCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCTGGTTGGAGCTCTTaGACTCCATCTTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAGWSS*TPSCVA
Trigger: TGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGACTTCACGGAGTTCTaGCCTTTCCGGCTGACATTC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDFTEF*PFRLTF
Trigger: GAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGCTGCAGTAGTACGTaGGCTGCATCCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSCSST*AASSKP
Trigger: AGGCTTAGAGGATGCAGCCAACGTACTACTGCAGCT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTCTGCTTGGCTTTCTaGTTAGCCCGGCGCGTGTCG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAVCLAF*LARRVS
Trigger: CGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLSPRP*TLTYHL
Trigger: CAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATCGGAGGCAATGGATaGAGTATCTTGAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVIGGNG*SILSTG
Trigger: CCCAGTGCTCAAGATACTCAATCCATTGCCTCCGAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCGGAAATATTTGCGCTaGACATCAAAGTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITRKYLR*TSKSRT
Trigger: TGTCCTCGACTTTGATGTCAAGCGCAAATATTTCCG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTTGGCGGAAATATTaGCGCTTGACATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSWRKY*RLTSKS
Trigger: CGACTTTGATGTCAAGCGCAAATATTTCCGCCAAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCTTGGCGGAAATATTaGCGCTTGACATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITSWRKY*RLTSKS
Trigger: CGACTTTGATGTCAAGCGCAAATATTTCCGCCAAGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCACTCCAGAAGACGGTaGTCATATACAGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHSRRR*SYTALA
Trigger: GGCCAAAGCTGTATATGACAACCGTCTTCTGGAGTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAGATGTTGGCCCCATaGGGTTTGAGGTCACGAACT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKMLAP*GLRSRT
Trigger: AGTTCGTGACCTCAAACCCAATGGGGCCAACATCTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTTGGCACGGTCAGCTaGATCGAAAGAACGCAATGC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLGTVS*IERTQC
Trigger: GCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTTGGCACGGTCAGCTaGATCGAAAGAACGCAATGC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLGTVS*IERTQC
Trigger: GCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCCTTGCAGGGGTACCTaGGAAGTACCTGTGACAAAC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFPCRGT*EVPVTN
Trigger: GTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAAAACCCCACGGAGTaGGGCAGGGCCTTATTAGGC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKNPTE*GRALLG
Trigger: GCCTAATAAGGCCCTGCCCAACTCCGTGGGGTTTTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
50% GC, longest homopolymer 8 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGACACACACGGTGAGTaGGTGGATTTCATTTATTGG +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITDTHGE*VDFIYW
Trigger: CCAATAAATGAAATCCACCAACTCACCGTGTGTGTC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACACTGTTCAAACAGTaGGGACAGACAGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTLFKQ*GQTGPC
Trigger: GCAGGGACCTGTCTGTCCCAACTGTTTGAACAGTGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTACACTGTTCAAACAGTaGGGACAGACAGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSTLFKQ*GQTGPC
Trigger: GCAGGGACCTGTCTGTCCCAACTGTTTGAACAGTGT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp GGAGGAGCAGTGGCAGTGCCATCTGCCTTCTGGATTGATGGCTTCTaGCAGATGTATTTGGGGTCCCTTCCAAGATTACAGATTTCTTCA +
Preference number: 5 (lower is better)
Translates to: GGAVAVPSAFWIDGF*QMYLGSLPRLQISS
Trigger: TGAAGAAATCTGTAATCTTGGAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp TCATGTGACAGTGTCAATATGGATTTGCAGACACCTGCAACAGCCTaGCAGGCAGCAGATGTGGGAAAGTCAATGGGCAGATTGGGAAGA +
Preference number: 5 (lower is better)
Translates to: SCDSVNMDLQTPATA*QAADVGKSMGRLGR
Trigger: TCTTCCCAATCTGCCCATTGACTTTCCCACATCTGCTGCCTGTCAGGCTGTTGCAGGTGTCTGCAAATCCATATTGACACTGTCACATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp AAGATTCTAGTAGCCAAATTGGAGGCCTGGGGCAGTGTGGCCATCTaGCTTATCCACTCTGACACGGTTTTTGTGTCACTTGTTGTCAGG +
Preference number: 5 (lower is better)
Translates to: KILVAKLEAWGSVAI*LIHSDTVFVSLVVR
Trigger: CCTGACAACAAGTGACACAAAAACCGTGTCAGAGTGGATAAGTCAGATGGCCACACTGCCCCAGGCCTCCAATTTGGCTACTAGAATCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp GCAGTGGGAAGATGGATTGATGGTGTAGGTGACTCGATCACCAGGTaGGGTACGGAACAAGGCATACATAGGGTTAAACATCTCTCGAGA +
Preference number: 5 (lower is better)
Translates to: AVGRWIDGVGDSITR*GTEQGIHRVKHLSR
Trigger: TCTCGAGAGATGTTTAACCCTATGTATGCCTTGTTCCGTACCTCACCTGGTGATCGAGTCACCTACACCATCAATCCATCTTCCCACTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474971.1
ENST00000612484.4
CDS GCA 90 bp TCATGTTGTCCAGTTTTACCAATAAGTCCCAGAAGTCTGTGCAAATaGCACTGCTGGAGGACTGTGAGGAGCATGGGCTACAGGCCTTAT +
Preference number: 5 (lower is better)
Translates to: SCCPVLPISPRSLCK*HCWRTVRSMGYRPY
Trigger: ATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCTGGGACTTATTGGTAAAACTGGACAACATGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp AAGAGAAGGGTGACCAGGGGAGTAAACCCATTGAAGCCTGAGCTCTaGGTCAAATTCAAGATCATGCGGGTACTCTTCAGTTCTGCAAAC +
Preference number: 5 (lower is better)
Translates to: KRRVTRGVNPLKPEL*VKFKIMRVLFSSAN
Trigger: GTTTGCAGAACTGAAGAGTACCCGCATGATCTTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTTACTCCCCTGGTCACCCTTCTCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TTGTTCTTGCTAGAAGCACTCTTGCTGCCAAAAAGGCTACTGGGCTaGTTCACAATCCGGGAAAGTGTTTCCAAAGGCTTCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LFLLEALLLPKRLLG*FTIRESVSKGFRAA
Trigger: TGCTGCTCTGAAGCCTTTGGAAACACTTTCCCGGATTGTGAACCAGCCCAGTAGCCTTTTTGGCAGCAAGAGTGCTTCTAGCAAGAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTCCTTTTCTCAATTTaGACCTCGGCCCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVLFSI*TSAPGS
Trigger: AGATCCTGGGGCCGAGGTCAAAATTGAGAAAAGGAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTCCTTTTCTCAATTTaGACCTCGGCCCCAGGATCT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVLFSI*TSAPGS
Trigger: AGATCCTGGGGCCGAGGTCAAAATTGAGAAAAGGAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCTGCCATATCCAGGTaGGTGATAAGGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFAAISR*VIRSTT
Trigger: AGTGGTTGACCTTATCACCAACCTGGATATGGCAGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTGAAGGAGACCCTCTaGAAGGACTTTGGGTTCATG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLKETL*KDFGFM
Trigger: CATGAACCCAAAGTCCTTCAAGAGGGTCTCCTTCAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTAGCATCAGCAACATaGCCTGCGCAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVASAT*PAQASS
Trigger: AGAACTGGCTTGCGCAGGCAATGTTGCTGATGCTAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAACACTCAGACCCAATaGAGAGCCCCACTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFNTQTQ*RAPLVY
Trigger: GTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAACACTCAGACCCAATaGAGAGCCCCACTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNTQTQ*RAPLVY
Trigger: GTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGTT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGTTTCAAAAAGAGCATaGTGGCCTCCGGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFVSKRA*WPPEQR
Trigger: TCTCTGCTCCGGAGGCCACAATGCTCTTTTTGAAAC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGTTTCAAAAAGAGCATaGTGGCCTCCGGAGCAGAGA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSVSKRA*WPPEQR
Trigger: TCTCTGCTCCGGAGGCCACAATGCTCTTTTTGAAAC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACACCTCCAGGCAATTaGGCAGGCAGCGAATGTGGA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTPPGN*AGSECG
Trigger: TCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGAGCTGTTGCAGTTGTaGCTGGTTGACTTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFELLQL*LVDLRF
Trigger: GAACCTCAAGTCAACCAGCAACAACTGCAACAGCTC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCATGAGCTGTTGCAGTaGTTGCTGGTTGACTTGAGG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHELLQ*LLVDLR
Trigger: CCTCAAGTCAACCAGCAACAACTGCAACAGCTCATG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCATGAGCTGTTGCAGTaGTTGCTGGTTGACTTGAGG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHELLQ*LLVDLR
Trigger: CCTCAAGTCAACCAGCAACAACTGCAACAGCTCATG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCATGTCCATGAGCTGTaGCAGTTGTTGCTGGTTGAC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHVHEL*QLLLVD
Trigger: GTCAACCAGCAACAACTGCAACAGCTCATGGACATG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTGCCCTTTGATCCATaGGAATATCCTGTCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLPFDP*EYPVPE
Trigger: CTCTGGGACAGGATATTCCAATGGATCAAAGGGCAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTGTGGAGCTCATCTaGTTCCAACGGGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSVELI*FQRVSI
Trigger: GATGCTGACCCGTTGGAACAAGATGAGCTCCACACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGATCTCCCCGATTTTaGTTTCCTCCAGGCTTGTCT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGSPRF*FPPGLS
Trigger: AGACAAGCCTGGAGGAAACAAAAATCGGGGAGATCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGGGAGTAAACCCATaGAAGCCTGAGCTCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRGVNP*KPELWV
Trigger: GACCCAGAGCTCAGGCTTCAATGGGTTTACTCCCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTGAATATGTCTGGATaGCGGCATGCGGCTGGCCCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAVNMSG*RHAAGP
Trigger: TGGGCCAGCCGCATGCCGCAATCCAGACATATTCAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGACTCCTCTGGAGTaGAAGCCTCTCCTTGGGAGG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAETPLE*KPLLGR
Trigger: CCTCCCAAGGAGAGGCTTCAACTCCAGAGGAGTCTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGGCAGGGGTGTCCTaGTCTTCTGCATTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKAGVS*SSAFWV
Trigger: TACCCAGAATGCAGAAGACAAGGACACCCCTGCCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATGTTGTTCATGCCATaGTGCTGGGTCTTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSMLFMP*CWVFAV
Trigger: CACAGCGAAGACCCAGCACAATGGCATGAACAACAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGTTGTTCATGCCATaGTGCTGGGTCTTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMLFMP*CWVFAV
Trigger: CACAGCGAAGACCCAGCACAATGGCATGAACAACAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCAGCATTGACTGTGTaGGCCATGTTGGGACTGGAC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAALTV*AMLGLD
Trigger: GTCCAGTCCCAACATGGCCAACACAGTCAATGCTGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGCTAGAAGCACTCTaGCTGCCAAAAAGGCTACTG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLLEAL*LPKRLL
Trigger: CAGTAGCCTTTTTGGCAGCAAGAGTGCTTCTAGCAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGAAGCTTGGCTGAGGTaGGAAGGAGCTTCATCCATC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKEAWLR*EGASSI
Trigger: GATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATGGAATCTTCTCGGTaGGCCTGCAAGGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKMESSR*ACKVEA
Trigger: AGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGTTGAAGATGGGGTaGTTGGGTAGCTGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQLKMG*LGSCQA
Trigger: TGCCTGACAGCTACCCAACAACCCCATCTTCAACTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTTCCCCACTTGGCCTaGTGGGACCCAATTCCTCTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALPHLA*WDPIPL
Trigger: CAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTTCTTCACTGCTTGTaGAAGGCAACGGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLLHCL*KATALL
Trigger: TAGAAGAGCCGTTGCCTTCAACAAGCAGTGAAGAAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTTCTTCTTCACTGCTaGTTGAAGGCAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLLLHC*LKATAL
Trigger: AAGAGCCGTTGCCTTCAACAAGCAGTGAAGAAGAAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCTCGTCTCAGGGCTaGAGCCTCAGCTGCAATGTC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALSSQG*SLSCNV
Trigger: GACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGTAGACGGCTAGTATaGAGCTTTGGCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCRRLV*SFGSST
Trigger: TGTGGATGAGCCAAAGCTCAATACTAGCCGTCTACA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTCACTTGTAGTGAGTTaGGGTGTTTCAATGCATAGC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITSLVVS*GVSMHS
Trigger: GCTATGCATTGAAACACCCAAACTCACTACAAGTGA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACGGTGGAGCCACCGCTaGCATGCTTCTCGGTATGTT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQARWSHR*HASRYV
Trigger: AACATACCGAGAAGCATGCAAGCGGTGGCTCCACCG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGATCACTCTCACAGTTaGTTTCTTTGGTCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDHSHS*FLWSAA
Trigger: AGCAGCGGACCAAAGAAACAAACTGTGAGAGTGATC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGGCTACAGGCCTTATaGCCCCTTTCCCGATCACTC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAGLQAL*PLSRSL
Trigger: GAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCCGGCTGACATTCATGTaGTCCAGTTTTACCAATAAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPRLTFM*SSFTNK
Trigger: CTTATTGGTAAAACTGGACAACATGAATGTCAGCCG...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCCATTCAGTAGCAGCTaGAGAACAGTGTCCCGGGTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVPFSSS*RTVSRV
Trigger: GACCCGGGACACTGTTCTCAAGCTGCTACTGAATGG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAACCTGCTCTGCATTTaGCCCTTCAGCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKNLLCI*PFSLVV
Trigger: GACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTCTGGGTAGATGTCTaGGATGTCAACATGGACATA +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITFWVDV*DVNMDI
Trigger: TATGTCCATGTTGACATCCAAGACATCTACCCAGAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTCTGGGTAGATGTCTaGGATGTCAACATGGACATA +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPFWVDV*DVNMDI
Trigger: TATGTCCATGTTGACATCCAAGACATCTACCCAGAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTACCCTCACGTACCATTaGTATAATGGCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVTLTYH*YNGISL
Trigger: GAGGCTGATGCCATTATACAAATGGTACGTGAGGGT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCACTCCAGAAGACGGTaGTCATATACAGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHSRRR*SYTALA
Trigger: GGCCAAAGCTGTATATGACAACCGTCTTCTGGAGTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCCAGATAAACCAGACCTaGGTAGAAGTGGTAATCTTC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITQINQT*VEVVIF
Trigger: GAAGATTACCACTTCTACCAAGGTCTGGTTTATCTG...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGGCCCCATTGGGTTaGAGGTCACGAACTTCACAA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLAPLG*RSRTSQ
Trigger: TTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAAGATGTTGGCCCCATaGGGTTTGAGGTCACGAACT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFKMLAP*GLRSRT
Trigger: AGTTCGTGACCTCAAACCCAATGGGGCCAACATCTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCTGTTACCAAGATGTaGGCCCCATTGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSVTKM*APLGLR
Trigger: CCTCAAACCCAATGGGGCCAACATCTTGGTAACAGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGTTACCAAGATGTaGGCCCCATTGGGTTTGAGG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSVTKM*APLGLR
Trigger: CCTCAAACCCAATGGGGCCAACATCTTGGTAACAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAAGCCGCCAACTGCTaGCGGATGGCTCCTGTCATT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKAANC*RMAPVI
Trigger: AATGACAGGAGCCATCCGCAAGCAGTTGGCGGCTTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAAAACCCCACGGAGTaGGGCAGGGCCTTATTAGGC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKNPTE*GRALLG
Trigger: GCCTAATAAGGCCCTGCCCAACTCCGTGGGGTTTTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp TTGGCTGAGGTTGGAAGGAGCTTCATCCATCAGCACGTCCTCTTGTaGTTCATCCTCTCCACTTCTGCTCACTATAATTGTACTGTTCCC +
Preference number: 5 (lower is better)
Translates to: LAEVGRSFIHQHVLL*FILSTSAHYNCTVP
Trigger: GGGAACAGTACAATTATAGTGAGCAGAAGTGGAGAGGATGAATCACAAGAGGACGTGCTGATGGATGAAGCTCCTTCCAACCTCAGCCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp CCTTCTTATTCTCCTCTGTTACCAAGATGTTGGCCCCATTGGGTTTaGGGTCACGAACTTCACAAACTCCAAACTCTTGGACCTCAGTGC +
Preference number: 5 (lower is better)
Translates to: PSYSPLLPRCWPHWV*GHELHKLQTLGPQC
Trigger: GCACTGAGGTCCAAGAGTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCTTGGTAACAGAGGAGAATAAGAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp GCACTGAAAAGGAGAAACAAACCCTTCCTTTTACCATGTGTGAGCTaGAGGCAGGCGATCTGTGGACCTGTCATCTCGATGGATCTGAAA +
Preference number: 5 (lower is better)
Translates to: ALKRRNKPFLLPCVS*RQAICGPVISMDLK
Trigger: TTTCAGATCCATCGAGATGACAGGTCCACAGATCGCCTGCCTTCAGCTCACACATGGTAAAAGGAAGGGTTTGTTTCTCCTTTTCAGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS GCA 90 bp TGCACTGGGTGGATATTTCATCATATGCAAGTCTCTGCAACATTCTaGAAGTCCAAAGCCATTCTCCTTTCCACCCCAGCTCTCTGCCAA +
Preference number: 5 (lower is better)
Translates to: CTGWIFHHMQVSATF*KSKAILLSTPALCQ
Trigger: TTGGCAGAGAGCTGGGGTGGAAAGGAGAATGGCTTTGGACTTGCAGAATGTTGCAGAGACTTGCATATGATGAAATATCCACCCAGTGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TGCCCTTTGATCCATTGGAATATCCTGTCCCAGAGACATAGCAATTaGTCTCATCATCTGGTCCTCTTCAGACATGCTGAGATCCCGAAC +
Preference number: 5 (lower is better)
Translates to: CPLIHWNILSQRHSN*SHHLVLFRHAEIPN
Trigger: GTTCGGGATCTCAGCATGTCTGAAGAGGACCAGATGATGAGAGCAATTGCTATGTCTCTGGGACAGGATATTCCAATGGATCAAAGGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp AAACTGGAGGAACTTGGCACGGTCAGCTTGATCGAAAGAACGCAATaGTCTCCAGAACCACTGGATCTGAATAGAGTTGGACTGGTACTT +
Preference number: 5 (lower is better)
Translates to: KLEELGTVSLIERTQ*SPEPLDLNRVGLVL
Trigger: AAGTACCAGTCCAACTCTATTCAGATCCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CCA 90 bp ATTGGAATATCCTGTCCCAGAGACATAGCAATTGCTCTCATCATCTaGTCCTCTTCAGACATGCTGAGATCCCGAACAACTCCTCCCATG +
Preference number: 5 (lower is better)
Translates to: IGISCPRDIAIALII*SSSDMLRSRTTPPM
Trigger: CATGGGAGGAGTTGTTCGGGATCTCAGCATGTCTGAAGAGGACCAGATGATGAGAGCAATTGCTATGTCTCTGGGACAGGATATTCCAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp ACGGTATACTGTGTCTGGCAGCTCATCAAGAAGGTGGAAGCAGCCTaGCAACATAGTATCTGTGAAAGTGTGGAGCTCATCTTGTTCCAA +
Preference number: 5 (lower is better)
Translates to: TVYCVWQLIKKVEAA*QHSICESVELILFQ
Trigger: TTGGAACAAGATGAGCTCCACACTTTCACAGATACTATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCTGCCAGACACAGTATACCGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp TGGTATACATCATCACCCATGTCTTGCAGGAGCTGGCCAACCTCTTaGGTCATAACCCCAGGTTTAGGATCAGATTTATCTGCTTCCTCT +
Preference number: 5 (lower is better)
Translates to: WYTSSPMSCRSWPTS*VITPGLGSDLSASS
Trigger: AGAGGAAGCAGATAAATCTGATCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGATGTATACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CAAACCCTTCCTTTTACCATGTGTGAGCTGAAGGCAGGCGATCTGTaGACCTGTCATCTCGATGGATCTGAAACTTCTGAATGCCATTCA +
Preference number: 5 (lower is better)
Translates to: QTLPFTMCELKAGDL*TCHLDGSETSECHS
Trigger: TGAATGGCATTCAGAAGTTTCAGATCCATCGAGATGACAGGTCCACAGATCGCCTGCCTTCAGCTCACACATGGTAAAAGGAAGGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCCAATGTTCCATGTTTaGATCTGCTGCAGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVPMFHV*ICCSSK
Trigger: CTTGGAACTGCAGCAGATCAAAACATGGAACATTGG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTATACAAGATACTGTTaGCTGATTCCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPYTRYC*LIPARH
Trigger: ATGCCTTGCAGGAATCAGCAAACAGTATCTTGTATA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTGCCATATCCAGGTaGGTGATAAGGTCAACCACT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKAAISR*VIRSTT
Trigger: AGTGGTTGACCTTATCACCAACCTGGATATGGCAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAAGTCCACTATGGGATaGAAAAGCTGCCATATCCAG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVKSTMG*KSCHIQ
Trigger: CTGGATATGGCAGCTTTTCAATCCCATAGTGGACTT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAACATCTGTCAATCCATaGTCCTGGAGTGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKTSVNP*SWSEES
Trigger: GCTCTCCTCACTCCAGGACAATGGATTGACAGATGT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGAGACAGAAGAACTTaGAAGAGGCGTTCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGDRRT*KRRSKG
Trigger: GCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAGGCTCAGTTTCATTTaGCTGGGTAGAATTAAAGCT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITRLSFI*LGRIKA
Trigger: AGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAGTGTCAATATGGATTaGCAGACACCTGCAACAGCC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSVNMD*QTPATA
Trigger: GGCTGTTGCAGGTGTCTGCAAATCCATATTGACACT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTATAACTGGCTCAGCTaGCTCAAAACACTCAGACCC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFYNWLS*LKTLRP
Trigger: GGGTCTGAGTGTTTTGAGCAAGCTGAGCCAGTTATA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCAGATGGTAGGCTGTTaGGGGTACACAGAGAGAGGA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVQMVGC*GYTERG
Trigger: TCCTCTCTCTGTGTACCCCAAACAGCCTACCATCTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACATGAGCTGTTGCAGTaGTTGCTGGTTGACTTGAGG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHELLQ*LLVDLR
Trigger: CCTCAAGTCAACCAGCAACAACTGCAACAGCTCATG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGTGTGGAGCTCATCTaGTTCCAACGGGTCAGCATC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSVELI*FQRVSI
Trigger: GATGCTGACCCGTTGGAACAAGATGAGCTCCACACT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCTGCTCCATTACGTTaGATTGCTGTCATGATCAGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSAPLR*IAVMIR
Trigger: CCTGATCATGACAGCAATCAAACGTAATGGAGCAGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCACCTGATTGACTACTaGCTTCAGAATCATGTCACG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHLIDY*LQNHVT
Trigger: CGTGACATGATTCTGAAGCAAGTAGTCAATCAGGTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCACCACTTCCAAGAGTTaGATTAGGACATTAAGGATG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPTTSKS*IRTLRM
Trigger: CATCCTTAATGTCCTAATCAAACTCTTGGAAGTGGT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGGGCTCTCCTTTTaGAGGAGATGGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSGLSF*RRWLSF
Trigger: AAAAGACAGCCATCTCCTCAAAAAGGAGAGCCCAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACGCCAGTTGTTGCTGTaGGATTGCAGGTACTTAGTC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRQLLL*DCRYLV
Trigger: GACTAAGTACCTGCAATCCAACAGCAACAACTGGCG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAACCAGCGCCAGTTGTaGCTGTTGGATTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNQRQL*LLDCRY
Trigger: GTACCTGCAATCCAACAGCAACAACTGGCGCTGGTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCACCATTGTAGTGAATaGGACCGTGTATCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVHHCSE*DRVSSS
Trigger: CGAAGAAGATACACGGTCCAATTCACTACAATGGTG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCTTGATATCCATTTCTTaGCTTTCTTCCAGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITLISIS*LSSSVF
Trigger: GAAGACGCTGGAAGAAAGCAAAGAAATGGATATCAA...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTGATATCCATTTCTTaGCTTTCTTCCAGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLISIS*LSSSVF
Trigger: GAAGACGCTGGAAGAAAGCAAAGAAATGGATATCAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCGCCAAAGGGGTATCATaGCCTTTATTTTCTTTACGT +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITAKGVS*PLFSLR
Trigger: ACGTAAAGAAAATAAAGGCAATGATACCCCTTTGGC...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTATGCGGATACAGCAGTaGGCCACTTCTGTGAATATG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSMRIQQ*ATSVNM
Trigger: CATATTCACAGAAGTGGCCAACTGCTGTATCCGCAT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGCGGATACAGCAGTaGGCCACTTCTGTGAATATG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMRIQQ*ATSVNM
Trigger: CATATTCACAGAAGTGGCCAACTGCTGTATCCGCAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAAGGCAGGGGTGTCCTaGTCTTCTGCATTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVKAGVS*SSAFWV
Trigger: TACCCAGAATGCAGAAGACAAGGACACCCCTGCCTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACTGTGTTGGCCATGTaGGGACTGGACAGGTCTAAG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTVLAM*GLDRSK
Trigger: CTTAGACCTGTCCAGTCCCAACATGGCCAACACAGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATCTTGAGAGGCTCCTaGGGCATCCTGCTCAGACTT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVILRGS*GILLRL
Trigger: AAGTCTGAGCAGGATGCCCAAGGAGCCTCTCAAGAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATGGAATCTTCTCGGTaGGCCTGCAAGGTGGAAGCT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVMESSR*ACKVEA
Trigger: AGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTGGGGTTGGGAGTGTaGGTTGCTGTTGTGAGGATT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVGLGV*VAVVRI
Trigger: AATCCTCACAACAGCAACCAACACTCCCAACCCCAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTATAACTCCATCTGAGTaGTTTCTGCTTCCCCACTTG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVITPSE*FLLPHL
Trigger: CAAGTGGGGAAGCAGAAACAACTCAGATGGAGTTAT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTTCTTCTTCACTGCTaGTTGAAGGCAACGGCTCTT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLLLHC*LKATAL
Trigger: AAGAGCCGTTGCCTTCAACAAGCAGTGAAGAAGAAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTGTAGACGGCTAGTATaGAGCTTTGGCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSCRRLV*SFGSST
Trigger: TGTGGATGAGCCAAAGCTCAATACTAGCCGTCTACA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGTAGACGGCTAGTATaGAGCTTTGGCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCRRLV*SFGSST
Trigger: TGTGGATGAGCCAAAGCTCAATACTAGCCGTCTACA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTCTTGCTCGACTTTTaGCCCTTTTCCTCACTTGTA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLLLDF*PFSSLV
Trigger: TACAAGTGAGGAAAAGGGCAAAAAGTCGAGCAAGAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGTTCTCATGGCTACTaGACCCACAGCTCTTGCTCG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAGSHGY*THSSCS
Trigger: CGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAACC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTCTTTGACTCCATCTaGTGTAGCAGGTCCAGGGGA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLFDSI*CSRSRG
Trigger: TCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGCTGGTTGGAGCTCTTaGACTCCATCTTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKAGWSS*TPSCVA
Trigger: TGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGACTTCACGGAGTTCTaGCCTTTCCGGCTGACATTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDFTEF*PFRLTF
Trigger: GAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTGTGCTTCTGACACCTaGTTTTCTGGGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVCASDT*FSGRAI
Trigger: AATTGCTCTCCCAGAAAACAAGGTGTCAGAAGCACA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTFAGD*LPLVVG
Trigger: TCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAACCTGCTCTGCATTTaGCCCTTCAGCTTGGTGGTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNLLCI*PFSLVV
Trigger: GACCACCAAGCTGAAGGGCAAAATGCAGAGCAGGTT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAATGGATTGAGTATCTaGAGCACTGGGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNGLSI*STGRWL
Trigger: CAGCCATCTCCCAGTGCTCAAGATACTCAATCCATT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCGGAAATATTTGCGCTaGACATCAAAGTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRKYLR*TSKSRT
Trigger: TGTCCTCGACTTTGATGTCAAGCGCAAATATTTCCG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCTTGGCGGAAATATTaGCGCTTGACATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSWRKY*RLTSKS
Trigger: CGACTTTGATGTCAAGCGCAAATATTTCCGCCAAGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGTCATATACAGCTTaGGCCACAATGCGTCCGACA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLSYTA*ATMRPT
Trigger: TGTCGGACGCATTGTGGCCAAAGCTGTATATGACAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTGGCCCCATTGGGTTaGAGGTCACGAACTTCACAA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLAPLG*RSRTSQ
Trigger: TTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGATGTTGGCCCCATaGGGTTTGAGGTCACGAACT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKMLAP*GLRSRT
Trigger: AGTTCGTGACCTCAAACCCAATGGGGCCAACATCTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGAGTTGGACTGGTACTaGTGGTATTCAGTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVELDWY*WYSVLD
Trigger: ATCCAACACTGAATACCACAAGTACCAGTCCAACTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAAAAACCCCACGGAGTaGGGCAGGGCCTTATTAGGC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAKNPTE*GRALLG
Trigger: GCCTAATAAGGCCCTGCCCAACTCCGTGGGGTTTTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGACACACACGGTGAGTaGGTGGATTTCATTTATTGG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVDTHGE*VDFIYW
Trigger: CCAATAAATGAAATCCACCAACTCACCGTGTGTGTC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGCAGTTTGTTCCCCTaGAGCAAGGTGATGCTTTGT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCSLFP*SKVMLC
Trigger: ACAAAGCATCACCTTGCTCAAGGGGAACAAACTGCA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGCTAGACTCCGACATTaGTATAATGGCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFARLRH*YNGISL
Trigger: GAGGCTGATGCCATTATACAAATGTCGGAGTCTAGC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000426907.5
CDS TCA 90 bp GAACAGTATAACTGGCTCAGCTTGCTCAAAACACTCAGACCCAATTaGGAGCCCCACTGGTTTACGGAGATGGAACGAATTTCACTCTGT +
Preference number: 5 (lower is better)
Translates to: EQYNWLSLLKTLRPN*EPHWFTEMERISLC
Trigger: ACAGAGTGAAATTCGTTCCATCTCCGTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGTTTTGAGCAAGCTGAGCCAGTTATACTGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp TCCAGGACTCAGCCACATTTGTGTTCCCAATCTTGGGTAGGGTCCTaGAAACATCAAGTATGCAAGCTCAACCTAAGCACTGAAAAGGAG +
Preference number: 5 (lower is better)
Translates to: SRTQPHLCSQSWVGS*KHQVCKLNLSTEKE
Trigger: CTCCTTTTCAGTGCTTAGGTTGAGCTTGCATACTTGATGTTTTCAGGACCCTACCCAAGATTGGGAACACAAATGTGGCTGAGTCCTGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTTACAAACTTTGAGTTaGTCTATTAAGGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPLQTLS*SIKALQ
Trigger: CTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTAATACATATAGGAGATaGAGGACTGCCAGCACCACT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSNTYRR*RTASTT
Trigger: AGTGGTGCTGGCAGTCCTCAATCTCCTATATGTATT...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCGATTCCTGCAAGGCATaGGAATACACTAATATAGAT +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPDSCKA*EYTNID
Trigger: ATCTATATTAGTGTATTCCAATGCCTTGCAGGAATC...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCTCTCCAAGTGGACAATaGATGTTAATGTTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPSPSGQ*MLMFVK
Trigger: CTTTACGAACATTAACATCAATTGTCCACTTGGAGA...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAAGTCCACTATGGGATaGAAAAGCTGCCATATCCAG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFKSTMG*KSCHIQ
Trigger: CTGGATATGGCAGCTTTTCAATCCCATAGTGGACTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCTGGATCTTTGGCTaGATCACAAACGGACATTCT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLWIFG*ITNGHS
Trigger: AGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCTGGATCTTTGGCTaGATCACAAACGGACATTCT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLWIFG*ITNGHS
Trigger: AGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCATTTCCTCTCCTTCTaGTGTAGTATTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFHFLSF*CSIGSL
Trigger: CAGAGACCCAATACTACACAAGAAGGAGAGGAAATG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCATTTCCTCTCCTTCTaGTGTAGTATTGGGTCTCTG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHFLSF*CSIGSL
Trigger: CAGAGACCCAATACTACACAAGAAGGAGAGGAAATG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACATCTGTCAATCCATaGTCCTGGAGTGAGGAGAGC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTSVNP*SWSEES
Trigger: GCTCTCCTCACTCCAGGACAATGGATTGACAGATGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAGTGTCAATATGGATTaGCAGACACCTGCAACAGCC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSVNMD*QTPATA
Trigger: GGCTGTTGCAGGTGTCTGCAAATCCATATTGACACT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTAGCATCAGCAACATaGCCTGCGCAAGCCAGTTCT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAVASAT*PAQASS
Trigger: AGAACTGGCTTGCGCAGGCAATGTTGCTGATGCTAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGCTGTTGCAGTTGTaGCTGGTTGACTTGAGGTTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVELLQL*LVDLRF
Trigger: GAACCTCAAGTCAACCAGCAACAACTGCAACAGCTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCTGCTCCATTACGTTaGATTGCTGTCATGATCAGG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSAPLR*IAVMIR
Trigger: CCTGATCATGACAGCAATCAAACGTAATGGAGCAGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGGTTTTTGTGTCACTaGTTGTCAGGGGAAGAGCAG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRFLCH*LSGEEQ
Trigger: CTGCTCTTCCCCTGACAACAAGTGACACAAAAACCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAACCAGCGCCAGTTGTaGCTGTTGGATTGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQANQRQL*LLDCRY
Trigger: GTACCTGCAATCCAACAGCAACAACTGGCGCTGGTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCAAACCAGCGCCAGTaGTTGCTGTTGGATTGCAGG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQASNQRQ*LLLDCR
Trigger: CCTGCAATCCAACAGCAACAACTGGCGCTGGTTTGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCACCATTGTAGTGAATaGGACCGTGTATCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSHHCSE*DRVSSS
Trigger: CGAAGAAGATACACGGTCCAATTCACTACAATGGTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACACTGCAGTCCTCTTaGATCAGTTCAGACTGGCCC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATLQSS*ISSDWP
Trigger: GGGCCAGTCTGAACTGATCAAAGAGGACTGCAGTGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAAAAGCCGAATGATGTaGTTCATGCCATTGTGCTGG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFKSRMM*FMPLCW
Trigger: CCAGCACAATGGCATGAACAACATCATTCGGCTTTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACTGTGTTGGCCATGTaGGGACTGGACAGGTCTAAG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATVLAM*GLDRSK
Trigger: CTTAGACCTGTCCAGTCCCAACATGGCCAACACAGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGCTTCAGAGCAGCATaGACTGTGTTGGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAGFRAA*TVLAML
Trigger: CAACATGGCCAACACAGTCAATGCTGCTCTGAAGCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGCTCAGACTTGTTCTaGCTAGAAGCACTCTTGCTG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCSDLF*LEALLL
Trigger: CAGCAAGAGTGCTTCTAGCAAGAACAAGTCTGAGCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCATCCTGCTCAGACTaGTTCTTGCTAGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVASCSD*FLLEAL
Trigger: GAGTGCTTCTAGCAAGAACAAGTCTGAGCAGGATGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAGTTGAAGATGGGGTaGTTGGGTAGCTGTCAGGCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAQLKMG*LGSCQA
Trigger: TGCCTGACAGCTACCCAACAACCCCATCTTCAACTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATAACTCCATCTGAGTaGTTTCTGCTTCCCCACTTG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFITPSE*FLLPHL
Trigger: CAAGTGGGGAAGCAGAAACAACTCAGATGGAGTTAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACTTCTTCACTGCTTGTaGAAGGCAACGGCTCTTCTA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLLHCL*KATALL
Trigger: TAGAAGAGCCGTTGCCTTCAACAAGCAGTGAAGAAG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCACTTGTAGTGAGTTaGGGTGTTTCAATGCATAGC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSLVVS*GVSMHS
Trigger: GCTATGCATTGAAACACCCAAACTCACTACAAGTGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCTCTTGCTCGACTTTTaGCCCTTTTCCTCACTTGTA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLLLDF*PFSSLV
Trigger: TACAAGTGAGGAAAAGGGCAAAAAGTCGAGCAAGAG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCTCTTGCTCGACTTTTaGCCCTTTTCCTCACTTGTA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLLLDF*PFSSLV
Trigger: TACAAGTGAGGAAAAGGGCAAAAAGTCGAGCAAGAG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCTGGTTGGAGCTCTTaGACTCCATCTTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAGWSS*TPSCVA
Trigger: TGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCATCCCCAAATACCTTGGCCAATaGAATGAGTGTATCCAAAAC +
Preference number: 5 (lower is better)
Translates to: EQGDALSWAAISNTITIPKYLGQ*NECIQN
Trigger: GTTTTGGATACACTCATTCAATTGGCCAAGGTATTT...GGGGATGGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCCCTTGAGCAAGGTGATGCTTTGTCCTGGGCTGCAATCTCTAACACCATCACCAAATACCTTGGCCAATaGAATGAGTGTATCCAAAAC +
Preference number: 5 (lower is better)
Translates to: PLEQGDALSWAAISNTITKYLGQ*NECIQN
Trigger: GTTTTGGATACACTCATTCAATTGGCCAAGGTATTT...GGTGATGGTGTTAGAGATTGCAGCCCAGGACAAAGCATCACCTTGCTCAAGGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTGTGCTTCTGACACCTaGTTTTCTGGGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFCASDT*FSGRAI
Trigger: AATTGCTCTCCCAGAAAACAAGGTGTCAGAAGCACA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATFAGD*LPLVVG
Trigger: TCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGCTGCAGTAGTACGTaGGCTGCATCCTCTAAGCCT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQASCSST*AASSKP
Trigger: AGGCTTAGAGGATGCAGCCAACGTACTACTGCAGCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTATCGGAGGCAATGGATaGAGTATCTTGAGCACTGGG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVIGGNG*SILSTG
Trigger: CCCAGTGCTCAAGATACTCAATCCATTGCCTCCGAT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTGTCATATACAGCTTaGGCCACAATGCGTCCGACA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLSYTA*ATMRPT
Trigger: TGTCGGACGCATTGTGGCCAAAGCTGTATATGACAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCACTCCAGAAGACGGTaGTCATATACAGCTTTGGCC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHSRRR*SYTALA
Trigger: GGCCAAAGCTGTATATGACAACCGTCTTCTGGAGTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTGGCCCCATTGGGTTaGAGGTCACGAACTTCACAA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLAPLG*RSRTSQ
Trigger: TTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGAGTTGGACTGGTACTaGTGGTATTCAGTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSELDWY*WYSVLD
Trigger: ATCCAACACTGAATACCACAAGTACCAGTCCAACTC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTTGGCACGGTCAGCTaGATCGAAAGAACGCAATGC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALGTVS*IERTQC
Trigger: GCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACACTGTTCAAACAGTaGGGACAGACAGGTCCCTGC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATLFKQ*GQTGPC
Trigger: GCAGGGACCTGTCTGTCCCAACTGTTTGAACAGTGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGCAGTTTGTTCCCCTaGAGCAAGGTGATGCTTTGT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCSLFP*SKVMLC
Trigger: ACAAAGCATCACCTTGCTCAAGGGGAACAAACTGCA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp CATTTTCAGTTGCTCTCTTTCTGGCCTATCACATACGAGCATCCATaGCATATTCTCCACTGTCTGTCCAGCATCTGCCAGTATTCCATC +
Preference number: 5 (lower is better)
Translates to: HFQLLSFWPITYEHP*HILHCLSSICQYSI
Trigger: GATGGAATACTGGCAGATGCTGGACAGACAGTGGAGAATATGTCATGGATGCTCGTATGTGATAGGCCAGAAAGAGAGCAACTGAAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
ENST00000612484.4
CDS TCA 90 bp TCTGTCAATCCATTGTCCTGGAGTGAGGAGAGCAGTGATGGTTCTTaGAATACAAACACAGTCACCACTTCAGTAGCTAGGAGGAAGAGT +
Preference number: 5 (lower is better)
Translates to: SVNPLSWSEESSDGS*NTNTVTTSVARRKS
Trigger: ACTCTTCCTCCTAGCTACTGAAGTGGTGACTGTGTTTGTATTTCAAGAACCATCACTGCTCTCCTCACTCCAGGACAATGGATTGACAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000489876.1
ENST00000612484.4
CDS TCA 90 bp GGGATACTTCCTCTCATCAAACAGCATTGGGGATGTGAAACCAACTaGACAGATGAAGAATGTCAGCCTGAATCGGGGAGTAGGTGTATA +
Preference number: 5 (lower is better)
Translates to: GILPLIKQHWGCETN*TDEECQPESGSRCI
Trigger: TATACACCTACTCCCCGATTCAGGCTGACATTCTTCATCTGTTCAGTTGGTTTCACATCCCCAATGCTGTTTGATGAGAGGAAGTATCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACCAATGTTCCATGTTTaGATCTGCTGCAGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKPMFHV*ICCSSK
Trigger: CTTGGAACTGCAGCAGATCAAAACATGGAACATTGG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTAGGAAGCCAATAAAGTaGTCAAATGCTCTATGGAAC +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVRKPIK*SNALWN
Trigger: GTTCCATAGAGCATTTGACAACTTTATTGGCTTCCT...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATAATACTGCTGAGTTaGGGAGTTCTCTCCAAGTGG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKIILLS*GVLSKW
Trigger: CCACTTGGAGAGAACTCCCAAACTCAGCAGTATTAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAAAGTCAATGGGCAGATaGGGAAGACCCAAAATGGTA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKKSMGR*GRPKMV
Trigger: TACCATTTTGGGTCTTCCCAATCTGCCCATTGACTT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAACACTCAGACCCAATaGAGAGCCCCACTGGTTTAC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQANTQTQ*RAPLVY
Trigger: GTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGTT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTGGTGTGATTTTAGATTaGCCCTTAGAGTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSGVILD*PLESEA
Trigger: TGCTTCAGACTCTAAGGGCAAATCTAAAATCACACC...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGGTGTGATTTTAGATTaGCCCTTAGAGTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFGVILD*PLESEA
Trigger: TGCTTCAGACTCTAAGGGCAAATCTAAAATCACACC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATGGACAGAGCCCAGTaGAAAGTTTCAAAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFMDRAQ*KVSKRA
Trigger: TGCTCTTTTTGAAACTTTCAACTGGGCTCTGTCCAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGGGAAGAGCAGCTTaGATCAATACATCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRGRAA*INTSAA
Trigger: AGCTGCTGATGTATTGATCAAAGCTGCTCTTCCCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTTTTGTGTCACTTGTaGTCAGGGGAAGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKFLCHL*SGEEQL
Trigger: AAGCTGCTCTTCCCCTGACAACAAGTGACACAAAAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCTGGGCTCTCCTTTTaGAGGAGATGGCTGTCTTTT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSGLSF*RRWLSF
Trigger: AAAAGACAGCCATCTCCTCAAAAAGGAGAGCCCAGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAGTTGTTGCTGTTGGATaGCAGGTACTTAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKVVAVG*QVLSHL
Trigger: CAGATGACTAAGTACCTGCAATCCAACAGCAACAAC...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACACCATTGTAGTGAATaGGACCGTGTATCTTCTTCG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKHHCSE*DRVSSS
Trigger: CGAAGAAGATACACGGTCCAATTCACTACAATGGTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGCCAAAGGGGTATCATaGCCTTTATTTTCTTTACGT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVAKGVS*PLFSLR
Trigger: ACGTAAAGAAAATAAAGGCAATGATACCCCTTTGGC...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTCCTTTTCAGTGTTaGTACTCTCTAGGGCCAAAG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSPFQC*YSLGPK
Trigger: CTTTGGCCCTAGAGAGTACAAACACTGAAAAGGAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTAGGCATTAAAGGTTaGCTGCCCTTGCCTTTCTGT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVGIKG*LPLPFC
Trigger: ACAGAAAGGCAAGGGCAGCAAACCTTTAATGCCTAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGTTGTTCATGCCATaGTGCTGGGTCTTCGCTGTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAMLFMP*CWVFAV
Trigger: CACAGCGAAGACCCAGCACAATGGCATGAACAACAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTGCTAGAAGCACTCTaGCTGCCAAAAAGGCTACTG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLLEAL*LPKRLL
Trigger: CAGTAGCCTTTTTGGCAGCAAGAGTGCTTCTAGCAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCATCCTGCTCAGACTaGTTCTTGCTAGAAGCACTC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAASCSD*FLLEAL
Trigger: GAGTGCTTCTAGCAAGAACAAGTCTGAGCAGGATGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTCACTTGTAGTGAGTTaGGGTGTTTCAATGCATAGC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFSLVVS*GVSMHS
Trigger: GCTATGCATTGAAACACCCAAACTCACTACAAGTGA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGCTGGTTGGAGCTCTTaGACTCCATCTTGTGTAGCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAAGWSS*TPSCVA
Trigger: TGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGATCACTCTCACAGTTaGTTTCTTTGGTCCGCTGCT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDHSHS*FLWSAA
Trigger: AGCAGCGGACCAAAGAAACAAACTGTGAGAGTGATC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCGGCTGACATTCATGTaGTCCAGTTTTACCAATAAG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFRLTFM*SSFTNK
Trigger: CTTATTGGTAAAACTGGACAACATGAATGTCAGCCG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATGTGCTTCTGACACCTaGTTTTCTGGGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKCASDT*FSGRAI
Trigger: AATTGCTCTCCCAGAAAACAAGGTGTCAGAAGCACA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGCAGGGTACCTATTaGTTTACAAAGGGTATAACC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQQGTY*FTKGIT
Trigger: GGTTATACCCTTTGTAAACAAATAGGTACCCTGCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTCTGGGTAGATGTCTaGGATGTCAACATGGACATA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFFWVDV*DVNMDI
Trigger: TATGTCCATGTTGACATCCAAGACATCTACCCAGAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACCCTCACGTACCATTaGTATAATGGCATCAGCCTC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTLTYH*YNGISL
Trigger: GAGGCTGATGCCATTATACAAATGGTACGTGAGGGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATGGATTGAGTATCTaGAGCACTGGGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNGLSI*STGRWL
Trigger: CAGCCATCTCCCAGTGCTCAAGATACTCAATCCATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACGGAAATATTTGCGCTaGACATCAAAGTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKRKYLR*TSKSRT
Trigger: TGTCCTCGACTTTGATGTCAAGCGCAAATATTTCCG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTGTCATATACAGCTTaGGCCACAATGCGTCCGACA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLSYTA*ATMRPT
Trigger: TGTCGGACGCATTGTGGCCAAAGCTGTATATGACAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGATAAACCAGACCTaGGTAGAAGTGGTAATCTTC +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQINQT*VEVVIF
Trigger: GAAGATTACCACTTCTACCAAGGTCTGGTTTATCTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACAAACTCCAAACTCTaGGACCTCAGTGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTNSKL*DLSAEG
Trigger: ACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGGCCCCATTGGGTTaGAGGTCACGAACTTCACAA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALAPLG*RSRTSQ
Trigger: TTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTTGTGGTATTCAGTGTaGGATTTCAGATCATCGATG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLWYSV*DFRSSM
Trigger: CATCGATGATCTGAAATCCAACACTGAATACCACAA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTACACAGACGCCAATCTaGTCTCGCATTGAATCATTA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFTQTPI*SRIESL
Trigger: TAATGATTCAATGCGAGACAAGATTGGCGTCTGTGT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp GCTCCTTGGATGCTTACATTTCCTACAGTCTACAATCCAGACCTGTaGCCAGTCAGAACTAGCCTCCTGTATATAGACTTCAAGTCTTCT +
Preference number: 5 (lower is better)
Translates to: APWMLTFPTVYNPDL*PVRTSLLYIDFKSS
Trigger: AGAAGACTTGAAGTCTATATACAGGAGGCTAGTTCTGACTGGTCACAGGTCTGGATTGTAGACTGTAGGAAATGTAAGCATCCAAGGAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS GCA 90 bp AGCAAGGCTGTGAAGTTCAACACAGCCAAGAGAAGCATTTTCAGTTaGTCTCTTTCTGGCCTATCACATACGAGCATCCATGACATATTC +
Preference number: 5 (lower is better)
Translates to: SKAVKFNTAKRSIFS*SLSGLSHTSIHDIF
Trigger: GAATATGTCATGGATGCTCGTATGTGATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCTCTTGGCTGTGTTGAACTTCACAGCCTTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp TTGCTTCAGAATCATGTCACGATAATCTGCTCCATTACGTTTGATTaGTGTCATGATCAGGTCACACACACGGTATACTGTGTCTGGCAG +
Preference number: 5 (lower is better)
Translates to: LLQNHVTIICSITFD*CHDQVTHTVYCVWQ
Trigger: CTGCCAGACACAGTATACCGTGTGTGTGACCTGATCATGACAGCAATCAAACGTAATGGAGCAGATTATCGTGACATGATTCTGAAGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CCACACCTGATTGACTACTTGCTTCAGAATCATGTCACGATAATCTaGTCCATTACGTTTGATTGCTGTCATGATCAGGTCACACACACG +
Preference number: 5 (lower is better)
Translates to: PHLIDYLLQNHVTII*SITFDCCHDQVTHT
Trigger: CGTGTGTGTGACCTGATCATGACAGCAATCAAACGTAATGGAGCAGATTATCGTGACATGATTCTGAAGCAAGTAGTCAATCAGGTGTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp GTGATAAGGTCAACCACTCTGACGGCTCTGGTGACAAATGTTATCTaGTCCTGTTCATCGCCAAGAAACTTTATGACCTTCAATAAGGCT +
Preference number: 5 (lower is better)
Translates to: VIRSTTLTALVTNVI*SCSSPRNFMTFNKA
Trigger: AGCCTTATTGAAGGTCATAAAGTTTCTTGGCGATGAACAGGACCAGATAACATTTGTCACCAGAGCCGTCAGAGTGGTTGACCTTATCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAATACATATAGGAGATaGAGGACTGCCAGCACCACT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVNTYRR*RTASTT
Trigger: AGTGGTGCTGGCAGTCCTCAATCTCCTATATGTATT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTATACAAGATACTGTTaGCTGATTCCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSYTRYC*LIPARH
Trigger: ATGCCTTGCAGGAATCAGCAAACAGTATCTTGTATA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTATACAAGATACTGTTaGCTGATTCCTGCAAGGCAT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFYTRYC*LIPARH
Trigger: ATGCCTTGCAGGAATCAGCAAACAGTATCTTGTATA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTTCTCCAAGTGGACAATaGATGTTAATGTTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVSPSGQ*MLMFVK
Trigger: CTTTACGAACATTAACATCAATTGTCCACTTGGAGA...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGAGACAGAAGAACTTaGAAGAGGCGTTCAAAAGGC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAGDRRT*KRRSKG
Trigger: GCCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTATTTCTTCAAGTAACTaGATGATGGCAGTCGTTGCA +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFISSSN*MMAVVA
Trigger: TGCAACGACTGCCATCATCAAGTTACTTGAAGAAAT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACATCTGCCTTCTGGATaGATGGCTTCTGACAGATGT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAHLPSG*MASDRC
Trigger: ACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATATAACTGGCTCAGCTaGCTCAAAACACTCAGACCC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAYNWLS*LKTLRP
Trigger: GGGTCTGAGTGTTTTGAGCAAGCTGAGCCAGTTATA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCACCTGATTGACTACTaGCTTCAGAATCATGTCACG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVHLIDY*LQNHVT
Trigger: CGTGACATGATTCTGAAGCAAGTAGTCAATCAGGTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGGGAAGAGCAGCTTaGATCAATACATCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQARGRAA*INTSAA
Trigger: AGCTGCTGATGTATTGATCAAAGCTGCTCTTCCCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGTTGTTGCTGTTGGATaGCAGGTACTTAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVVVAVG*QVLSHL
Trigger: CAGATGACTAAGTACCTGCAATCCAACAGCAACAAC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGCGGATACAGCAGTaGGCCACTTCTGTGAATATG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAMRIQQ*ATSVNM
Trigger: CATATTCACAGAAGTGGCCAACTGCTGTATCCGCAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGCTAGAAGCACTCTaGCTGCCAAAAAGGCTACTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALLEAL*LPKRLL
Trigger: CAGTAGCCTTTTTGGCAGCAAGAGTGCTTCTAGCAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CTGAGCCCCAGACTCAAGACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTCTTTATCAGTTATCTTaGTTTCTTCCTCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: LSPRLKTTRKAHQVKPSVLYQLS*FLPQPV
Trigger: AACTGGCTGAGGAAGAAACAAAGATAACTGATAAAG...AACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGTCTTGAGTCTGGGGCTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTAGACGGCTAGTATaGAGCTTTGGCTCATCCACA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQACRRLV*SFGSST
Trigger: TGTGGATGAGCCAAAGCTCAATACTAGCCGTCTACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTCTTGCTCGACTTTTaGCCCTTTTCCTCACTTGTA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLLLDF*PFSSLV
Trigger: TACAAGTGAGGAAAAGGGCAAAAAGTCGAGCAAGAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGCAGGGTACCTATTaGTTTACAAAGGGTATAACC +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQQGTY*FTKGIT
Trigger: GGTTATACCCTTTGTAAACAAATAGGTACCCTGCTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAATGGATTGAGTATCTaGAGCACTGGGAGATGGCTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQANGLSI*STGRWL
Trigger: CAGCCATCTCCCAGTGCTCAAGATACTCAATCCATT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGGAAATATTTGCGCTaGACATCAAAGTCGAGGACA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRKYLR*TSKSRT
Trigger: TGTCCTCGACTTTGATGTCAAGCGCAAATATTTCCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGTCATATACAGCTTaGGCCACAATGCGTCCGACA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALSYTA*ATMRPT
Trigger: TGTCGGACGCATTGTGGCCAAAGCTGTATATGACAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACAAACTCCAAACTCTaGGACCTCAGTGCTGAAGGT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATNSKL*DLSAEG
Trigger: ACCTTCAGCACTGAGGTCCAAGAGTTTGGAGTTTGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTTTGTGGTATTCAGTGTaGGATTTCAGATCATCGATG +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFLWYSV*DFRSSM
Trigger: CATCGATGATCTGAAATCCAACACTGAATACCACAA...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTTGTGGTATTCAGTGTaGGATTTCAGATCATCGATG +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSLWYSV*DFRSSM
Trigger: CATCGATGATCTGAAATCCAACACTGAATACCACAA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGAGTTGGACTGGTACTaGTGGTATTCAGTGTTGGAT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVELDWY*WYSVLD
Trigger: ATCCAACACTGAATACCACAAGTACCAGTCCAACTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGACACACACGGTGAGTaGGTGGATTTCATTTATTGG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVDTHGE*VDFIYW
Trigger: CCAATAAATGAAATCCACCAACTCACCGTGTGTGTC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 90 bp AGATTGGGAAGACCCAAAATGGTAACCAAAGGCAACAGTCCTTTCTaGTTCACAAATTCCTGGCAGTGGTCATCTGTTGTATTGTTGCTC +
Preference number: 5 (lower is better)
Translates to: RLGRPKMVTKGNSPF*FTNSWQWSSVVLLL
Trigger: GAGCAACAATACAACAGATGACCACTGCCAGGAATTTGTGAATCAGAAAGGACTGTTGCCTTTGGTTACCATTTTGGGTCTTCCCAATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTCAGTTCCAAGAGAAGTaGCTCATCATTACAAACTTT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFQFQEK*LIITNF
Trigger: AAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTG...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTCAGTTCCAAGAGAAGTaGCTCATCATTACAAACTTT +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSQFQEK*LIITNF
Trigger: AAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTG...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACCAATGTTCCATGTTTaGATCTGCTGCAGTTCCAAG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAPMFHV*ICCSSK
Trigger: CTTGGAACTGCAGCAGATCAAAACATGGAACATTGG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGAGAAGCATTTTCAGTaGCTCTCTTTCTGGCCTATC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAEKHFQ*LSFWPI
Trigger: GATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCTC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTGATTCCTGCAAGGCATaGGAATACACTAATATAGAT +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFDSCKA*EYTNID
Trigger: ATCTATATTAGTGTATTCCAATGCCTTGCAGGAATC...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTCTGGATCTTTGGCTaGATCACAAACGGACATTCT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALWIFG*ITNGHS
Trigger: AGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAAATTTCTTCAAGTAACTaGATGATGGCAGTCGTTGCA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKISSSN*MMAVVA
Trigger: TGCAACGACTGCCATCATCAAGTTACTTGAAGAAAT...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp ACTACTAGAAAGGCTCACCAAGTAAAACCCTCGGTTGGGTCAAGTGAGCTCTCTTCATCTGTTGTATTGTaGCTCAGAATAGATTCCACA +
Preference number: 5 (lower is better)
Translates to: TTRKAHQVKPSVGSSELSSSVVL*LRIDST
Trigger: TGTGGAATCTATTCTGAGCAACAATACAACAGATGA...AGAGAGCTCACTTGACCCAACCGAGGGTTTTACTTGGTGAGCCTTTCTAGTAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTTTTGTGTCACTTGTaGTCAGGGGAAGAGCAGCTT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAFLCHL*SGEEQL
Trigger: AAGCTGCTCTTCCCCTGACAACAAGTGACACAAAAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGTTGTTGCTGTTGGATaGCAGGTACTTAGTCATCTG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAVVAVG*QVLSHL
Trigger: CAGATGACTAAGTACCTGCAATCCAACAGCAACAAC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTCACTTGTAGTGAGTTaGGGTGTTTCAATGCATAGC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVSLVVS*GVSMHS
Trigger: GCTATGCATTGAAACACCCAAACTCACTACAAGTGA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp AGATGGGGCAGCTGGGACACACACGGTGAGTTGGTGGATTTCATTTATTGGTTTAAATACCTTGGCCAATaGAATGAGTGTATCCAAAAC +
Preference number: 5 (lower is better)
Translates to: RWGSWDTHGELVDFIYWFKYLGQ*NECIQN
Trigger: GTTTTGGATACACTCATTCAATTGGCCAAGGTATTT...AAACCAATAAATGAAATCCACCAACTCACCGTGTGTGTCCCAGCTGCCCCATCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCGGCTGACATTCATGTaGTCCAGTTTTACCAATAAG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRLTFM*SSFTNK
Trigger: CTTATTGGTAAAACTGGACAACATGAATGTCAGCCG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATGTGCTTCTGACACCTaGTTTTCTGGGAGAGCAATT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQACASDT*FSGRAI
Trigger: AATTGCTCTCCCAGAAAACAAGGTGTCAGAAGCACA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCAGCAGGGTACCTATTaGTTTACAAAGGGTATAACC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVQQGTY*FTKGIT
Trigger: GGTTATACCCTTTGTAAACAAATAGGTACCCTGCTG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATCTTGGCGGAAATATTaGCGCTTGACATCAAAGTCG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQASWRKY*RLTSKS
Trigger: CGACTTTGATGTCAAGCGCAAATATTTCCGCCAAGA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACACAGACGCCAATCTaGTCTCGCATTGAATCATTA +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTQTPI*SRIESL
Trigger: TAATGATTCAATGCGAGACAAGATTGGCGTCTGTGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 90 bp CTTCAAATACTATATACAATCGATTCTTCATTTCTTCGGGGGATTTaGGATGCAGCTCACGATAGGAGTCTTCAAACACATGGTCACGAC +
Preference number: 5 (lower is better)
Translates to: LQILYTIDSSFLRGI*DAAHDRSLQTHGHD
Trigger: GTCGTGACCATGTGTTTGAAGACTCCTATCGTGAGCTGCATCGCAAATCCCCCGAAGAAATGAAGAATCGATTGTATATAGTATTTGAAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 90 bp TTCCATTTCCTCTCCTTCTTGTGTAGTATTGGGTCTCTGGATCTTTaGCTTGATCACAAACGGACATTCTTTTCGGCACAAATCTACTTC +
Preference number: 5 (lower is better)
Translates to: FHFLSFLCSIGSLDL*LDHKRTFFSAQIYF
Trigger: GAAGTAGATTTGTGCCGAAAAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCCAATACTACACAAGAAGGAGAGGAAATGGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATTACAAACTTTGAGTTaGTCTATTAAGGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKLQTLS*SIKALQ
Trigger: CTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAACAGTTCCAAGAGAAGTaGCTCATCATTACAAACTTT +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKQFQEK*LIITNF
Trigger: AAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTG...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGAAGCCAATAAAGTaGTCAAATGCTCTATGGAAC +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRKPIK*SNALWN
Trigger: GTTCCATAGAGCATTTGACAACTTTATTGGCTTCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCTCCAAGTGGACAATaGATGTTAATGTTCGTAAAG +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSPSGQ*MLMFVK
Trigger: CTTTACGAACATTAACATCAATTGTCCACTTGGAGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTAGGCTCAGTTTCATTTaGCTGGGTAGAATTAAAGCT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVRLSFI*LGRIKA
Trigger: AGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CAGACTGGCAGACAGATGACGAGAGAGGGAGTGACGACAACAAAAATAGACAAATCATCTGTTGTATTGTaGCTCAGAATAGATTCCACA +
Preference number: 5 (lower is better)
Translates to: QTGRQMTREGVTTTKIDKSSVVL*LRIDST
Trigger: TGTGGAATCTATTCTGAGCAACAATACAACAGATGA...TTTGTCTATTTTTGTTGTCGTCACTCCCTCTCTCGTCATCTGTCTGCCAGTCTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGGTGTGATTTTAGATTaGCCCTTAGAGTCTGAAGCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAGVILD*PLESEA
Trigger: TGCTTCAGACTCTAAGGGCAAATCTAAAATCACACC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATGGACAGAGCCCAGTaGAAAGTTTCAAAAAGAGCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAMDRAQ*KVSKRA
Trigger: TGCTCTTTTTGAAACTTTCAACTGGGCTCTGTCCAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTACCACTTCCAAGAGTTaGATTAGGACATTAAGGATG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVTTSKS*IRTLRM
Trigger: CATCCTTAATGTCCTAATCAAACTCTTGGAAGTGGT...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTGCCAAAGGGGTATCATaGCCTTTATTTTCTTTACGT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVAKGVS*PLFSLR
Trigger: ACGTAAAGAAAATAAAGGCAATGATACCCCTTTGGC...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACGGCTGACATTCATGTaGTCCAGTTTTACCAATAAG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQARLTFM*SSFTNK
Trigger: CTTATTGGTAAAACTGGACAACATGAATGTCAGCCG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTCTGGGTAGATGTCTaGGATGTCAACATGGACATA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAFWVDV*DVNMDI
Trigger: TATGTCCATGTTGACATCCAAGACATCTACCCAGAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACAGATAAACCAGACCTaGGTAGAAGTGGTAATCTTC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAQINQT*VEVVIF
Trigger: GAAGATTACCACTTCTACCAAGGTCTGGTTTATCTG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACACAGACGCCAATCTaGTCTCGCATTGAATCATTA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATQTPI*SRIESL
Trigger: TAATGATTCAATGCGAGACAAGATTGGCGTCTGTGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTTTACAAACTTTGAGTTaGTCTATTAAGGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLQTLS*SIKALQ
Trigger: CTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAA...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAAGGAAGCCAATAAAGTaGTCAAATGCTCTATGGAAC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQARKPIK*SNALWN
Trigger: GTTCCATAGAGCATTTGACAACTTTATTGGCTTCCT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAATTTCTTCAAGTAACTaGATGATGGCAGTCGTTGCA +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQAISSSN*MMAVVA
Trigger: TGCAACGACTGCCATCATCAAGTTACTTGAAGAAAT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAACCACTTCCAAGAGTTaGATTAGGACATTAAGGATG +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQATTSKS*IRTLRM
Trigger: CATCCTTAATGTCCTAATCAAACTCTTGGAAGTGGT...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCATTGATATCCATTTCTTaGCTTTCTTCCAGCGTCTTC +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALISIS*LSSSVF
Trigger: GAAGACGCTGGAAGAAAGCAAAGAAATGGATATCAA...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp GGTTTCCTGGAGAATCCATCTTTTCTCCAGATGCCTAGCATGTGCTTAAGAGTTCTTTATCAGTTATCTTaGTTTCTTCCTCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: GFLENPSFLQMPSMCLRVLYQLS*FLPQPV
Trigger: AACTGGCTGAGGAAGAAACAAAGATAACTGATAAAG...AACTCTTAAGCACATGCTAGGCATCTGGAGAAAAGATGGATTCTCCAGGAAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 90 bp CTTTTGCTAAATACATATAGGAGATTGAGGACTGCCAGCACCACTTaGATATCAGAGGAAGCCAATAAAGTTGTCAAATGCTCTATGGAA +
Preference number: 5 (lower is better)
Translates to: LLLNTYRRLRTASTT*ISEEANKVVKCSME
Trigger: TTCCATAGAGCATTTGACAACTTTATTGGCTTCCTCTGATATGCAAGTGGTGCTGGCAGTCCTCAATCTCCTATATGTATTTAGCAAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 90 bp CCAGTACAGTCAATAATACTGCTGAGTTTGGGAGTTCTCTCCAAGTaGACAATTGATGTTAATGTTCGTAAAGAAGCTGCTTTAATCTCC +
Preference number: 5 (lower is better)
Translates to: PVQSIILLSLGVLSK*TIDVNVRKEAALIS
Trigger: GGAGATTAAAGCAGCTTCTTTACGAACATTAACATCAATTGTCCACTTGGAGAGAACTCCCAAACTCAGCAGTATTATTGACTGTACTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCAGATTCCTGCAAGGCATaGGAATACACTAATATAGAT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQADSCKA*EYTNID
Trigger: ATCTATATTAGTGTATTCCAATGCCTTGCAGGAATC...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS-3UTR CAA 90 bp CCAATCTTGTCTCGCATTGAATCATTAGCTGTGCACATCAACACATTCCAAGCACTTTATCAGTTATCTTaGTTTCTTCCTCAGCCAGTT +
Preference number: 5 (lower is better)
Translates to: PILSRIESLAVHINTFQALYQLS*FLPQPV
Trigger: AACTGGCTGAGGAAGAAACAAAGATAACTGATAAAG...TGCTTGGAATGTGTTGATGTGCACAGCTAATGATTCAATGCGAGACAAGATTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 90 bp TGGCCATATTGGGAGACAAACGATAAACATCCTGGCAACTCAGGTTaGACTTTGCCATTGAACCTTAGACAAAGTTTTTATTTGGTATTG +
Preference number: 5 (lower is better)
Translates to: WPYWETNDKHPGNSG*TLPLNLRQSFYLVL
Trigger: CAATACCAAATAAAAACTTTGTCTAAGGTTCAATGGCAAAGTTCAACCTGAGTTGCCAGGATGTTTATCGTTTGTCTCCCAATATGGCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446750.1
CDS GCA 90 bp TTTCCAATGTTCCATGTTTTGATCTGCTGCAGTTCCAAGAGAAGTTaGTCATCATTACAAACTTTGAGTTTGTCTATTAAGGCTCTGCAG +
Preference number: 5 (lower is better)
Translates to: FPMFHVLICCSSKRS*SSLQTLSLSIKALQ
Trigger: CTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTGCAGCAGATCAAAACATGGAACATTGGAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
ENST00000612484.4
CDS CCA 72 bp GCCGGGCTGCCCCCGAAGATGCGGCTAGCTCTCCGCTaGCGCCTGCCGAGGCCTCGGCCGCAATGGCTCCGC +
Preference number: 6 (lower is better)
Translates to: AGLPPKMRLALR*RLPRPRPQWLR
Trigger: GCGGAGCCATTGCGGCCGAGGCCTCGGCAGGCGCCAGCGGAGAGCTAGCCGCATCTTCGGGGGCAGCCCGGC
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218328.12
ENST00000262854.11
CDS GCA 72 bp CTCTGTCAGCCGCTCTCTCGCCGCGCCGCCGGCAGCTaGCGGGCTGCCCCCGAAGATGCGGCTAGCTCTCCG +
Preference number: 6 (lower is better)
Translates to: LCQPLSRRAAGS*RAAPEDAASSP
Trigger: CGGAGAGCTAGCCGCATCTTCGGGGGCAGCCCGGCAGCTGCCGGCGGCGCGGCGAGAGAGCGGCTGACAGAG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000218328.12
ENST00000262854.11
CDS CCA 72 bp GCACTTCCGCCACAGCTGGTGGGGCATCCCCAGGAGTaGAGCTGCCTGCTCTGGGCTGCTCAGAACTGCCAG +
Preference number: 6 (lower is better)
Translates to: ALPPQLVGHPQE*SCLLWAAQNCQ
Trigger: CTGGCAGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCCCACCAGCTGTGGCGGAAGTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CTCCCGCGAGAATTCTCCGGCTTAGAACGGCACGAGCCGAAGACCTaGCCGCCGCCTCCGCGGCTACTGCAGTCAGTAACCGAGCCACCG +
Preference number: 6 (lower is better)
Translates to: LPREFSGLERHEPKT*PPPPRLLQSVTEPP
Trigger: CGGTGGCTCGGTTACTGACTGCAGTAGCCGCGGAGGCGGCGGCAAGGTCTTCGGCTCGTGCCGTTCTAAGCCGGAGAATTCTCGCGGGAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342160.7
ENST00000446750.1
CDS CCA 72 bp CTGGTGGGGCATCCCCAGGAGTGGAGCTGCCTGCTCTaGGCTGCTCAGAACTGCCAGCTGCTGAAGTGTCAC +
Preference number: 6 (lower is better)
Translates to: LVGHPQEWSCLL*AAQNCQLLKCH
Trigger: GTGACACTTCAGCAGCTGGCAGTTCTGAGCAGCCCAGAGCAGGCAGCTCCACTCCTGGGGATGCCCCACCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CCGGAGGAACCTAGCCTGCCTGTCTGCTTGGCTTTCTaGTTAGCCCGGCGCGTGTCGTCCCGGAGCTGGATG +
Preference number: 6 (lower is better)
Translates to: PEEPSLPVCLAF*LARRVSSRSWM
Trigger: CATCCAGCTCCGGGACGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp CTGTGGCTGCTCCTCAGGCAGGCCATCAGGAGAGAGGGTTTCACATaGGGCTCGCCGCTGCTGCTCGAGGTTGTATTCCCGCAGCTCGGC +
Preference number: 6 (lower is better)
Translates to: LWLLLRQAIRREGFT*GSPLLLEVVFPQLG
Trigger: GCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGAGGAGCAGCCACAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp TCCAGCAGCTCATCATCAGAACGGGCGATGATGTGGACGTCATCGTaGCCTACCAGGAGGCGGGCCCGACCCCGGCTTTGTAGGGGAAGG +
Preference number: 6 (lower is better)
Translates to: SSSSSSERAMMWTSS*PTRRRARPRLCRGR
Trigger: CCTTCCCCTACAAAGCCGGGGTCGGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACATCATCGCCCGTTCTGATGATGAGCTGCTGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TCAGGAGAGAGGGTTTCACATTGGGCTCGCCGCTGCTaGTCGAGGTTGTATTCCCGCAGCTCGGCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: SGERVSHWARRC*SRLYSRSSASR
Trigger: CCTGCTGGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS GCA 72 bp CCATCAGGAGAGAGGGTTTCACATTGGGCTCGCCGCTaGTGCTCGAGGTTGTATTCCCGCAGCTCGGCCAGC +
Preference number: 6 (lower is better)
Translates to: PSGERVSHWARR*CSRLYSRSSAS
Trigger: GCTGGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS GCA 72 bp CCAGCTGGCTCTCACGGGTGTCTCGGACAGGAGGCTTaGTCTCCCGCTCTGTGGCATGGACCAGAAAGAAGG +
Preference number: 6 (lower is better)
Translates to: PAGSHGCLGQEA*SPALWHGPERR
Trigger: CCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGACACCCGTGAGAGCCAGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp CACCAGGATTCCCCACCACTGCAGGCGCTGAGCTATTaGTGGAGGGGGCAGTCCGGGTTGGTGGACGAATGC +
Preference number: 6 (lower is better)
Translates to: HQDSPPLQALSY*WRGQSGLVDEC
Trigger: GCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGGGGAATCCTGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp GAGCCTAAACCGGAGGAACCTAGCCTGCCTGTCTGCTaGGCTTTCTTGTTAGCCCGGCGCGTGTCGTCCCGG +
Preference number: 6 (lower is better)
Translates to: EPKPEEPSLPVC*AFLLARRVSSR
Trigger: CCGGGACGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCGGTTTAGGCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp GCCAGCTGGCTCTCACGGGTGTCTCGGACAGGAGGCTaGCTCTCCCGCTCTGTGGCATGGACCAGAAAGAAG +
Preference number: 6 (lower is better)
Translates to: ASWLSRVSRTGG*LSRSVAWTRKK
Trigger: CTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGACACCCGTGAGAGCCAGCTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp GAATTCTCCGGCTTAGAACGGCACGAGCCGAAGACCTaGCCGCCGCCTCCGCGGCTACTGCAGTCAGTAACC +
Preference number: 6 (lower is better)
Translates to: EFSGLERHEPKT*PPPPRLLQSVT
Trigger: GGTTACTGACTGCAGTAGCCGCGGAGGCGGCGGCAAGGTCTTCGGCTCGTGCCGTTCTAAGCCGGAGAATTC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000342160.7
ENST00000446750.1
CDS CAA 90 bp TGCAGCAGAGGTGTGGCCTGGGCTGAGAGGGTAGCATCAGCAACATaGCCTGCGCAAGCCAGTTCTCGCAACAACACTGAGCCCCCAGGG +
Preference number: 6 (lower is better)
Translates to: CSRGVAWAERVASAT*PAQASSRNNTEPPG
Trigger: CCCTGGGGGCTCAGTGTTGTTGCGAGAACTGGCTTGCGCAGGCAATGTTGCTGATGCTACCCTCTCAGCCCAGGCCACACCTCTGCTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GGCATGCGGCTGGCCCAAGGACACGAAGGATGTAGTTaGTCTCCCGAGAGCCGAGGCTGCCAGACACAACAC +
Preference number: 6 (lower is better)
Translates to: GMRLAQGHEGCS*SPESRGCQTQH
Trigger: GTGTTGTGTCTGGCAGCCTCGGCTCTCGGGAGATCAACTACATCCTTCGTGTCCTTGGGCCAGCCGCATGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GCCTTAGGGTCCTCTGACTGCGCCCGATGCCCTGGGTaGGACGAGTTGTTGAAGAGCCACTGCCCAGTGTCA +
Preference number: 6 (lower is better)
Translates to: ALGSSDCARCPG*DELLKSHCPVS
Trigger: TGACACTGGGCAGTGGCTCTTCAACAACTCGTCTCACCCAGGGCATCGGGCGCAGTCAGAGGACCCTAAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TGGCCAGTATTGGCCGTCAGCTGCCTTAGGGTCCTCTaGCTGCGCCCGATGCCCTGGGTGAGACGAGTTGTT +
Preference number: 6 (lower is better)
Translates to: WPVLAVSCLRVL*LRPMPWVRRVV
Trigger: AACAACTCGTCTCACCCAGGGCATCGGGCGCAGTCAGAGGACCCTAAGGCAGCTGACGGCCAATACTGGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TTCAGTCACACCAGGATTCCCCACCACTGCAGGCGCTaGGCTATTTGTGGAGGGGGCAGTCCGGGTTGGTGG +
Preference number: 6 (lower is better)
Translates to: FSHTRIPHHCRR*AICGGGSPGWW
Trigger: CCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGGGGAATCCTGGTGTGACTGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CACGGCAGAATCTCTGGTGGAAGAGCTCTCAGAGGATaGAGGTGGGGAGCTGTCCTCAGGTGGCTGGGCAGA +
Preference number: 6 (lower is better)
Translates to: HGRISGGRALRG*RWGAVLRWLGR
Trigger: TCTGCCCAGCCACCTGAGGACAGCTCCCCACCTGCATCCTCTGAGAGCTCTTCCACCAGAGATTCTGCCGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GCTGAGCCTAAACCGGAGGAACCTAGCCTGCCTGTCTaGTTGGCTTTCTTGTTAGCCCGGCGCGTGTCGTCC +
Preference number: 6 (lower is better)
Translates to: AEPKPEEPSLPV*LAFLLARRVSS
Trigger: GGACGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCGGTTTAGGCTCAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CCA 72 bp CAGGATTCCCCACCACTGCAGGCGCTGAGCTATTTGTaGAGGGGGCAGTCCGGGTTGGTGGACGAATGCCTA +
Preference number: 6 (lower is better)
Translates to: QDSPPLQALSYL*RGQSGLVDECL
Trigger: TAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGGGGAATCCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TCCTCAGGCAGGCCATCAGGAGAGAGGGTTTCACATTaGGCTCGCCGCTGCTGCTCGAGGTTGTATTCCCGC +
Preference number: 6 (lower is better)
Translates to: SSGRPSGERVSH*ARRCCSRLYSR
Trigger: GCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp CTTGCGAGGAACAGGCGGGCCAAGGCAGGGGTGTCCTaGTCTTCTGCATTCTGGGTATGTGGGAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: LARNRRAKAGVS*SSAFWVCGSRW
Trigger: CCACCTGCTCCCACATACCCAGAATGCAGAAGACAAGGACACCCCTGCCTTGGCCCGCCTGTTCCTCGCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CTCCTCAGGCAGGCCATCAGGAGAGAGGGTTTCACATaGGGCTCGCCGCTGCTGCTCGAGGTTGTATTCCCG +
Preference number: 6 (lower is better)
Translates to: LLRQAIRREGFT*GSPLLLEVVFP
Trigger: CGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGATGGCCTGCCTGAGGAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp CCACCACTGCAGGCGCTGAGCTATTTGTGGAGGGGGCAGTCCGGGTaGGTGGACGAATGCCTAGCTGGTTCTGTAGAACTTCCCGACGGA +
Preference number: 6 (lower is better)
Translates to: PPLQALSYLWRGQSG*VDECLAGSVELPDG
Trigger: TCCGTCGGGAAGTTCTACAGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CTTCAGTCACACCAGGATTCCCCACCACTGCAGGCGCTGAGCTATTaGTGGAGGGGGCAGTCCGGGTTGGTGGACGAATGCCTAGCTGGT +
Preference number: 6 (lower is better)
Translates to: LQSHQDSPPLQALSY*WRGQSGLVDECLAG
Trigger: ACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTGCAGTGGTGGGGAATCCTGGTGTGACTGAAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp GTGCCCAAACAGACGCTCATGCATGAGCTGTCGCTGCCGGGCTTCTaGCTCTCGTCTCAGGGCTTGAGCCTCAGCTGCAATGTCAGGTGG +
Preference number: 6 (lower is better)
Translates to: VPKQTLMHELSLPGF*LSSQGLSLSCNVRW
Trigger: CCACCTGACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp GAGCCTAAACCGGAGGAACCTAGCCTGCCTGTCTGCTTGGCTTTCTaGTTAGCCCGGCGCGTGTCGTCCCGGAGCTGGATGATGACCTGT +
Preference number: 6 (lower is better)
Translates to: EPKPEEPSLPVCLAF*LARRVSSRSWMMTC
Trigger: ACAGGTCATCATCCAGCTCCGGGACGACACGCGCCGGGCTAACAAGAAAGCCAAGCAGACAGGCAGGCTAGGTTCCTCCGGTTTAGGCTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp TTGATGTGTGCCAGCTGGCTCTCACGGGTGTCTCGGACAGGAGGCTaGCTCTCCCGCTCTGTGGCATGGACCAGAAAGAAGGCCTCGACA +
Preference number: 6 (lower is better)
Translates to: LMCASWLSRVSRTGG*LSRSVAWTRKKAST
Trigger: TGTCGAGGCCTTCTTTCTGGTCCATGCCACAGAGCGGGAGAGCAAGCCTCCTGTCCGAGACACCCGTGAGAGCCAGCTGGCACACATCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 72 bp TGTCGCTGCCGGGCTTCTTGCTCTCGTCTCAGGGCTTaGGCCTCAGCTGCAATGTCAGGTGGCATCACAGCT +
Preference number: 6 (lower is better)
Translates to: CRCRASCSRLRA*ASAAMSGGITA
Trigger: AGCTGTGATGCCACCTGACATTGCAGCTGAGGCTCAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGACA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CGGAGGTGCTACTGTGCCCAAACAGACGCTCATGCATaGGCTGTCGCTGCCGGGCTTCTTGCTCTCGTCTCA +
Preference number: 6 (lower is better)
Translates to: RRCYCAQTDAHA*AVAAGLLALVS
Trigger: TGAGACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TCCCGGGTGAGCCTCAGACAGAGACGAAGGGTGGCATaGAAAGTATCTGGGTCCACAGGGACTCCCAGCATG +
Preference number: 6 (lower is better)
Translates to: SRVSLRQRRRVA*KVSGSTGTPSM
Trigger: CATGCTGGGAGTCCCTGTGGACCCAGATACTTTGCATGCCACCCTTCGTCTCTGTCTGAGGCTCACCCGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GAACAGGCGGGCCAAGGCAGGGGTGTCCTTGTCTTCTaGATTCTGGGTATGTGGGAGCAGGTGGTCCAGAAC +
Preference number: 6 (lower is better)
Translates to: EQAGQGRGVLVF*ILGMWEQVVQN
Trigger: GTTCTGGACCACCTGCTCCCACATACCCAGAATGCAGAAGACAAGGACACCCCTGCCTTGGCCCGCCTGTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp AGTGCGGAGGTGCTACTGTGCCCAAACAGACGCTCATaGATGAGCTGTCGCTGCCGGGCTTCTTGCTCTCGT +
Preference number: 6 (lower is better)
Translates to: SAEVLLCPNRRS*MSCRCRASCSR
Trigger: ACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CCTCAGACAGAGACGAAGGGTGGCATGCAAAGTATCTaGGTCCACAGGGACTCCCAGCATGCTCACGCAGGC +
Preference number: 6 (lower is better)
Translates to: PQTETKGGMQSI*VHRDSQHAHAG
Trigger: GCCTGCGTGAGCATGCTGGGAGTCCCTGTGGACCCAGATACTTTGCATGCCACCCTTCGTCTCTGTCTGAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TCATCCAGCAGCTCATCATCAGAACGGGCGATGATGTaGACGTCATCGTTGCCTACCAGGAGGCGGGCCCGA +
Preference number: 6 (lower is better)
Translates to: SSSSSSSERAMM*TSSLPTRRRAR
Trigger: TCGGGCCCGCCTCCTGGTAGGCAACGATGACGTCCACATCATCGCCCGTTCTGATGATGAGCTGCTGGATGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp GAGGGGGCAGTCCGGGTTGGTGGACGAATGCCTAGCTaGTTCTGTAGAACTTCCCGACGGATGTCATCAGGC +
Preference number: 6 (lower is better)
Translates to: EGAVRVGGRMPS*FCRTSRRMSSG
Trigger: GCCTGATGACATCCGTCGGGAAGTTCTACAGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CAGACGCTCATGCATGAGCTGTCGCTGCCGGGCTTCTaGCTCTCGTCTCAGGGCTTGAGCCTCAGCTGCAAT +
Preference number: 6 (lower is better)
Translates to: QTLMHELSLPGF*LSSQGLSLSCN
Trigger: ATTGCAGCTGAGGCTCAAGCCCTGAGACGAGAGCAAGAAGCCCGGCAGCGACAGCTCATGCATGAGCGTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CTCTGCACAGCAAGGCGAGTATACTGGACCCCACGGTaGCCACTTAAGCGACTGGTGAAAGCCGGGCTTCGG +
Preference number: 6 (lower is better)
Translates to: LCTARRVYWTPR*PLKRLVKAGLR
Trigger: CCGAAGCCCGGCTTTCACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGCTGTGCAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CCTCCTTGCTCCAGTCACGCTGGCCCTGGAATACACCATGCTCTCTaGTGGTGCTGTTTACCTGACAGTGTCTCCCCAGCCCCCACTGTG +
Preference number: 6 (lower is better)
Translates to: PPCSSHAGPGIHHAL*WCCLPDSVSPAPTV
Trigger: CACAGTGGGGGCTGGGGAGACACTGTCAGGTAAACAGCACCACAAGAGAGCATGGTGTATTCCAGGGCCAGCGTGACTGGAGCAAGGAGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 90 bp GCAGCTCCTGAGGAACCTCTCCCAAAGCTGGTGGGGTTGGGAGTGTaGGTTGCTGTTGTGAGGATTGCAGAGTGCCAAGGGTCTCCTTGG +
Preference number: 6 (lower is better)
Translates to: AAPEEPLPKLVGLGV*VAVVRIAECQGSPW
Trigger: CCAAGGAGACCCTTGGCACTCTGCAATCCTCACAACAGCAACCAACACTCCCAACCCCACCAGCTTTGGGAGAGGTTCCTCAGGAGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp GTGCCACCTCTCTGCACAGCAAGGCGAGTATACTGGACCCCACGGTaGCCACTTAAGCGACTGGTGAAAGCCGGGCTTCGGAGAATAGCA +
Preference number: 6 (lower is better)
Translates to: VPPLCTARRVYWTPR*PLKRLVKAGLRRIA
Trigger: TGCTATTCTCCGAAGCCCGGCTTTCACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGCTGTGCAGAGAGGTGGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp AGAGGTTTCCCCCTCACCGCCAGCGCTCACTGGCACTaGCTTCACGGAGTTCTTGCCTTTCCGGCTGACATT +
Preference number: 6 (lower is better)
Translates to: RGFPLTASAHWH*LHGVLAFPADI
Trigger: AATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCTGGCGGTGAGGGGGAAACCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 72 bp TGTTCATGCCATTGTGCTGGGTCTTCGCTGTGGCACTaGTGTAGAAGCTGGAGGTGGAGGGGCAGGACTCCA +
Preference number: 6 (lower is better)
Translates to: CSCHCAGSSLWH*CRSWRWRGRTP
Trigger: TGGAGTCCTGCCCCTCCACCTCCAGCTTCTACAGCAGTGCCACAGCGAAGACCCAGCACAATGGCATGAACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TGTCTGAGTGACATCATGATCCTCCTCCTGCACTTCTaGTTCCCCAGGCTCGCCTGGGTCCTGCTGGTTGCT +
Preference number: 6 (lower is better)
Translates to: CLSDIMILLLHF*FPRLAWVLLVA
Trigger: AGCAACCAGCAGGACCCAGGCGAGCCTGGGGAAGCAGAAGTGCAGGAGGAGGATCATGATGTCACTCAGACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CACGCTGGCCCTGGAATACACCATGCTCTCTTGTGGTaGTGTTTACCTGACAGTGTCTCCCCAGCCCCCACT +
Preference number: 6 (lower is better)
Translates to: HAGPGIHHALLW*CLPDSVSPAPT
Trigger: AGTGGGGGCTGGGGAGACACTGTCAGGTAAACAGCACCACAAGAGAGCATGGTGTATTCCAGGGCCAGCGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CCA 72 bp TCCCAGGGTAGTGAACATGAATGGTGTGGCCAGTATTaGCCGTCAGCTGCCTTAGGGTCCTCTGACTGCGCC +
Preference number: 6 (lower is better)
Translates to: SQGSEHEWCGQY*PSAALGSSDCA
Trigger: GGCGCAGTCAGAGGACCCTAAGGCAGCTGACGGCCAATACTGGCCACACCATTCATGTTCACTACCCTGGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TCTAGGACACTACGGCGCAGGTCTGAGGGCAGAGTCTaGATGAAGGTCACAGGGTCCATAGGGGTGTCTGAG +
Preference number: 6 (lower is better)
Translates to: SRTLRRRSEGRV*MKVTGSIGVSE
Trigger: CTCAGACACCCCTATGGACCCTGTGACCTTCATCCAGACTCTGCCCTCAGACCTGCGCCGTAGTGTCCTAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp ATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTaGCTAGACTCCGACGTTGCTGCTTGTTGCTGTCTC +
Preference number: 6 (lower is better)
Translates to: MGDSSLRTDASD*LDSDVAACCCL
Trigger: GAGACAGCAACAAGCAGCAACGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CATGTCCATGAGCTGTTGCAGTTGTTGCTGGTTGACTaGAGGTTCCCGGCGGGAGCCACCTTCCTCTTGCCC +
Preference number: 6 (lower is better)
Translates to: HVHELLQLLLVD*RFPAGATFLLP
Trigger: GGGCAAGAGGAAGGTGGCTCCCGCCGGGAACCTCAAGTCAACCAGCAACAACTGCAACAGCTCATGGACATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp AGGGGCCACAGGCATCATGCTAACCGTTGCTGCTTGTaGCTGTCTCCGCGCCCTTTGACCCTCACGTACCAT +
Preference number: 6 (lower is better)
Translates to: RGHRHHANRCCL*LSPRPLTLTYH
Trigger: ATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGGTTAGCATGATGCCTGTGGCCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474288.1
CDS CAA 72 bp ATGAGGGGCCACAGGCATCATGCTAACCGTTGCTGCTaGTTGCTGTCTCCGCGCCCTTTGACCCTCACGTAC +
Preference number: 6 (lower is better)
Translates to: MRGHRHHANRCC*LLSPRPLTLTY
Trigger: GTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGGTTAGCATGATGCCTGTGGCCCCTCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000474288.1
CDS CAA 90 bp CAGCCTAGGGCTGCATCCATGGATACTGAGAGCCAGGAAAGCTGGTaGGAGCTCTTTGACTCCATCTTGTGTAGCAGGTCCAGGGGACGG +
Preference number: 6 (lower is better)
Translates to: QPRAASMDTESQESW*ELFDSILCSRSRGR
Trigger: CCGTCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCAGCCCTAGGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 72 bp GAAGGGCGATGCGGATACAGCAGTTGGCCACTTCTGTaGATATGTCTGGATTGCGGCATGCGGCTGGCCCAA +
Preference number: 6 (lower is better)
Translates to: EGRCGYSSWPLL*ICLDCGMRLAQ
Trigger: TTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGCTGTATCCGCATCGCCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GGCAGCTGGAGCTCCCGGCCACCCAAAGGTCGCTTCTaGGATGCCACAATTACCACATTCTCAGCCATGTCA +
Preference number: 6 (lower is better)
Translates to: GSWSSRPPKGRF*DATITTFSAMS
Trigger: TGACATGGCTGAGAATGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGGTGGCCGGGAGCTCCAGCTGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS GCA 72 bp GTGTCTGAGCTGGCATTCTGTGCTAGTTCTCGTCGCTaGTGCTCAGCTCTCTGCTGTGCCAGTACTTCCTCC +
Preference number: 6 (lower is better)
Translates to: VSELAFCASSRR*CSALCCASTSS
Trigger: GGAGGAAGTACTGGCACAGCAGAGAGCTGAGCAGCAGCGACGAGAACTAGCACAGAATGCCAGCTCAGACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CTTCGGAGAATAGCAGAGAGTGCGGAGGTGCTACTGTaGCCAAACAGACGCTCATGCATGAGCTGTCGCTGC +
Preference number: 6 (lower is better)
Translates to: LRRIAESAEVLL*PNRRSCMSCRC
Trigger: GCAGCGACAGCTCATGCATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTGCTATTCTCCGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp ACTGGTGAAAGCCGGGCTTCGGAGAATAGCAGAGAGTaGGGAGGTGCTACTGTGCCCAAACAGACGCTCATG +
Preference number: 6 (lower is better)
Translates to: TGESRASENSRE*GGATVPKQTLM
Trigger: CATGAGCGTCTGTTTGGGCACAGTAGCACCTCCGCACTCTCTGCTATTCTCCGAAGCCCGGCTTTCACCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TCCCCAAGCATGTCCCACAGCTCGTCCAAACTCAGCTaGTCGCTGAGCAGGGGTAACTCAGGTGGTCTTTCT +
Preference number: 6 (lower is better)
Translates to: SPSMSHSSSKLS*SLSRGNSGGLS
Trigger: AGAAAGACCACCTGAGTTACCCCTGCTCAGCGAGCAGCTGAGTTTGGACGAGCTGTGGGACATGCTTGGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000463852.1
ENST00000612484.4
CDS CCA 72 bp CAATGGGGCGGTGTAAGGGCTCCAGGGAGGAGAGGATaGAGTCCAACTGAAGGAGACCCTCTTGAAGGACTT +
Preference number: 6 (lower is better)
Translates to: QWGGVRAPGRRG*SPTEGDPLEGL
Trigger: AAGTCCTTCAAGAGGGTCTCCTTCAGTTGGACTCCATCCTCTCCTCCCTGGAGCCCTTACACCGCCCCATTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp GCGGATACAGCAGTTGGCCACTTCTGTGAATATGTCTaGATTGCGGCATGCGGCTGGCCCAAGGACACGAAG +
Preference number: 6 (lower is better)
Translates to: ADTAVGHFCEYV*IAACGWPKDTK
Trigger: CTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGCTGTATCCGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CGGGCCAAGGCAGGGGTGTCCTTGTCTTCTGCATTCTaGGTATGTGGGAGCAGGTGGTCCAGAACAAAAGCT +
Preference number: 6 (lower is better)
Translates to: RAKAGVSLSSAF*VCGSRWSRTKA
Trigger: AGCTTTTGTTCTGGACCACCTGCTCCCACATACCCAGAATGCAGAAGACAAGGACACCCCTGCCTTGGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TGTCAGAGAACTGTGGTCTGCATGGCGCACCATCAGTaGATGGGTGGTAGGGATATTTCCTGGGGATGGGGG +
Preference number: 6 (lower is better)
Translates to: CQRTVVCMAHHQ*MGGRDISWGWG
Trigger: CCCCCATCCCCAGGAAATATCCCTACCACCCATCCACTGATGGTGCGCCATGCAGACCACAGTTCTCTGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CCAGGACAGCAAAAGGCCCATCAGCAAGGTGGGTCGTaGACTGCCGTAGGATCTGGTTTAACACAGTGCGGT +
Preference number: 6 (lower is better)
Translates to: PGQQKAHQQGGS*TAVGSGLTQCG
Trigger: ACCGCACTGTGTTAAACCAGATCCTACGGCAGTCCACGACCCACCTTGCTGATGGGCCTTTTGCTGTCCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000480438.1
ENST00000612484.4
CDS CCA 72 bp TTTGCTCCCTGCAACTCCTCCTTGCTCCAGTCACGCTaGCCCTGGAATACACCATGCTCTCTTGTGGTGCTG +
Preference number: 6 (lower is better)
Translates to: FAPCNSSLLQSR*PWNTPCSLVVL
Trigger: CAGCACCACAAGAGAGCATGGTGTATTCCAGGGCCAGCGTGACTGGAGCAAGGAGGAGTTGCAGGGAGCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 72 bp GCAGCTCCTGAGGAACCTCTCCCAAAGCTGGTGGGGTaGGGAGTGTTGGTTGCTGTTGTGAGGATTGCAGAG +
Preference number: 6 (lower is better)
Translates to: AAPEEPLPKLVG*GVLVAVVRIAE
Trigger: CTCTGCAATCCTCACAACAGCAACCAACACTCCCAACCCCACCAGCTTTGGGAGAGGTTCCTCAGGAGCTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CAGGCGCTGAGCTATTTGTGGAGGGGGCAGTCCGGGTaGGTGGACGAATGCCTAGCTGGTTCTGTAGAACTT +
Preference number: 6 (lower is better)
Translates to: QALSYLWRGQSG*VDECLAGSVEL
Trigger: AAGTTCTACAGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATAGCTCAGCGCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TTGCTGTCTCCGCGCCCTTTGACCCTCACGTACCATTaGTATAATGGCATCAGCCTCAGCCTCCAGCTGCCG +
Preference number: 6 (lower is better)
Translates to: LLSPRPLTLTYH*YNGISLSLQLP
Trigger: CGGCAGCTGGAGGCTGAGGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp TCCAGTCACGCTGGCCCTGGAATACACCATGCTCTCTaGTGGTGCTGTTTACCTGACAGTGTCTCCCCAGCC +
Preference number: 6 (lower is better)
Translates to: SSHAGPGIHHAL*WCCLPDSVSPA
Trigger: GGCTGGGGAGACACTGTCAGGTAAACAGCACCACAAGAGAGCATGGTGTATTCCAGGGCCAGCGTGACTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 90 bp ATTCCCCACACTGCTCCAACAGCTTCCCGAACCTTCCTGACCAAGTaGGCCTGCTGGTTTCTCTGGATCACTAACCCACTCAGGTCAGGC +
Preference number: 6 (lower is better)
Translates to: IPHTAPTASRTFLTK*ACWFLWITNPLRSG
Trigger: GCCTGACCTGAGTGGGTTAGTGATCCAGAGAAACCAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAGCTGTTGGAGCAGTGTGGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
CDS CAA 90 bp CGCAGTGCACTGAACTGGGGAAAGTTCTGGACACCTCCAGGCAATTaGGCAGGCAGCGAATGTGGAGATTCAAGCACCGTGGTGGGATTC +
Preference number: 6 (lower is better)
Translates to: RSALNWGKFWTPPGN*AGSECGDSSTVVGF
Trigger: GAATCCCACCACGGTGCTTGAATCTCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp TCAGGAGAGAGGGTTTCACATTGGGCTCGCCGCTGCTGCTCGAGGTaGTATTCCCGCAGCTCGGCCAGCAGGGTACCTATTTGTTTACAA +
Preference number: 6 (lower is better)
Translates to: SGERVSHWARRCCSR*YSRSSASRVPICLQ
Trigger: TTGTAAACAAATAGGTACCCTGCTGGCCGAGCTGCGGGAATACAACCTCGAGCAGCAGCGGCGAGCCCAATGTGAAACCCTCTCTCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp CTGGCTAGACTCCGACGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTGTATAATGGCATCAGCCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: LARLRRCCLLLSPRP*TLTYHLYNGISLSL
Trigger: GAGGCTGAGGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGAGTCTAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GGGAGGAGCAGTGGCAGTGCCATCTGCCTTCTGGATTaGTGGCTTCTGACAGATGTATTTGGGGTCCCTTCC +
Preference number: 6 (lower is better)
Translates to: GRSSGSAICLLD*WLLTDVFGVPS
Trigger: GGAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TCCTCATCCTCGTTACTGCCACTGCTGTCCTCTTCCTaGGTGTGCTCCTCCTCATCCTCAGGGTCCAGGATA +
Preference number: 6 (lower is better)
Translates to: SSSSLLPLLSSS*VCSSSSSGSRI
Trigger: TATCCTGGACCCTGAGGATGAGGAGGAGCACACTCAGGAAGAGGACAGCAGTGGCAGTAACGAGGATGAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp AAAAGTCATCCAGCAGCTCATCATCAGAACGGGCGATaGTGTGGACGTCATCGTTGCCTACCAGGAGGCGGG +
Preference number: 6 (lower is better)
Translates to: KSHPAAHHQNGR*CGRHRCLPGGG
Trigger: CCCGCCTCCTGGTAGGCAACGATGACGTCCACATCATCGCCCGTTCTGATGATGAGCTGCTGGATGACTTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CCAGAAGTCTGTGCAAATGCCACTGCTGGAGGACTGTaGGGAGCATGGGCTACAGGCCTTATTGCCCCTTTC +
Preference number: 6 (lower is better)
Translates to: PEVCANATAGGL*GAWATGLIAPF
Trigger: GAAAGGGGCAATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 72 bp TCAACCTGCATCTCTTGTGAACTGAGCACCTCAGGCTaGCCAGCAATCACCACTGAGTCGGTTTCAGCCTCC +
Preference number: 6 (lower is better)
Translates to: STCISCELSTSG*PAITTESVSAS
Trigger: GGAGGCTGAAACCGACTCAGTGGTGATTGCTGGGCAGCCTGAGGTGCTCAGTTCACAAGAGATGCAGGTTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TATTTGTGGAGGGGGCAGTCCGGGTTGGTGGACGAATaGCTAGCTGGTTCTGTAGAACTTCCCGACGGATGT +
Preference number: 6 (lower is better)
Translates to: YLWRGQSGLVDE*LAGSVELPDGC
Trigger: ACATCCGTCGGGAAGTTCTACAGAACCAGCTAGGCATTCGTCCACCAACCCGGACTGCCCCCTCCACAAATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GGTGTTTCAATGCATAGCTCACTCTCACTGCTGCGCTaGAAGATGGAGAGCAGACTGCGGATGACCCAGTGG +
Preference number: 6 (lower is better)
Translates to: GVSMHSSLSLLR*KMESRLRMTQW
Trigger: CCACTGGGTCATCCGCAGTCTGCTCTCCATCTTGCAGCGCAGCAGTGAGAGTGAGCTATGCATTGAAACACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp GTTGTTGAAGAGCCACTGCCCAGTGTCAGAGAACTGTaGTCTGCATGGCGCACCATCAGTGGATGGGTGGTA +
Preference number: 6 (lower is better)
Translates to: VVEEPLPSVREL*SAWRTISGWVV
Trigger: TACCACCCATCCACTGATGGTGCGCCATGCAGACCACAGTTCTCTGACACTGGGCAGTGGCTCTTCAACAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp AAGGTGCCACCTCTCTGCACAGCAAGGCGAGTATACTaGACCCCACGGTTGCCACTTAAGCGACTGGTGAAA +
Preference number: 6 (lower is better)
Translates to: KVPPLCTARRVY*TPRLPLKRLVK
Trigger: TTTCACCAGTCGCTTAAGTGGCAACCGTGGGGTCCAGTATACTCGCCTTGCTGTGCAGAGAGGTGGCACCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp ACAAAAAGTAGGACCAAGAGACAAGAAAGGGCTTCGTaGTCCAGAAGGAGCCGTCCTCGGAGGCGGAGGAGA +
Preference number: 6 (lower is better)
Translates to: TKSRTKRQERAS*SRRSRPRRRRR
Trigger: TCTCCTCCGCCTCCGAGGACGGCTCCTTCTGGACCACGAAGCCCTTTCTTGTCTCTTGGTCCTACTTTTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp GCTTTCTTGTTAGCCCGGCGCGTGTCGTCCCGGAGCTaGATGATGACCTGTAGTACCCTCAAGAAGAACTTC +
Preference number: 6 (lower is better)
Translates to: AFLLARRVSSRS*MMTCSTLKKNF
Trigger: GAAGTTCTTCTTGAGGGTACTACAGGTCATCATCCAGCTCCGGGACGACACGCGCCGGGCTAACAAGAAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp GGGGAGGAGCAGTGGCAGTGCCATCTGCCTTCTGGATaGATGGCTTCTGACAGATGTATTTGGGGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: GEEQWQCHLPSG*MASDRCIWGPF
Trigger: GAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCACTGCTCCTCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CTGTGGGGTTCCATCGGAGGCAATGGATTGAGTATCTaGAGCACTGGGAGATGGCTGGTCCACATCCATGGG +
Preference number: 6 (lower is better)
Translates to: LWGSIGGNGLSI*STGRWLVHIHG
Trigger: CCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTCAATCCATTGCCTCCGATGGAACCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000463852.1
ENST00000612484.4
CDS CAA 90 bp TCCTCTTGCCCTGTATCCTCTTCTCCTCGAGACCCCTCCTTCTCCTaGCTTAGTCTCTCTCGAATCACAGGTTCTCCTCGGAGGATGTGG +
Preference number: 6 (lower is better)
Translates to: SSCPVSSSPRDPSFS*LSLSRITGSPRRMW
Trigger: CCACATCCTCCGAGGAGAACCTGTGATTCGAGAGAGACTAAGCAAGGAGAAGGAGGGGTCTCGAGGAGAAGAGGATACAGGGCAAGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CTCGCCTGGGTCCTGCTGGTTGCTACTGGAATCTTGAGAGGCTCCTaGGGCATCCTGCTCAGACTTGTTCTTGCTAGAAGCACTCTTGCT +
Preference number: 6 (lower is better)
Translates to: LAWVLLVATGILRGS*GILLRLVLARSTLA
Trigger: AGCAAGAGTGCTTCTAGCAAGAACAAGTCTGAGCAGGATGCCCAAGGAGCCTCTCAAGATTCCAGTAGCAACCAGCAGGACCCAGGCGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CTGCATCCATGGATACTGAGAGCCAGGAAAGCTGGTTGGAGCTCTTaGACTCCATCTTGTGTAGCAGGTCCAGGGGACGGTTCTCATGGC +
Preference number: 6 (lower is better)
Translates to: LHPWILRARKAGWSS*TPSCVAGPGDGSHG
Trigger: GCCATGAGAACCGTCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp ATGCCACTGCTGGAGGACTGTGAGGAGCATGGGCTACAGGCCTTATaGCCCCTTTCCCGATCACTCTCACAGTTTGTTTCTTTGGTCCGC +
Preference number: 6 (lower is better)
Translates to: MPLLEDCEEHGLQAL*PLSRSLSQFVSLVR
Trigger: GCGGACCAAAGAAACAAACTGTGAGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp ATGCCATTCATGCCTTCGAGGGCAGCAAAGCCTTGCAGGGGTACCTaGGAAGTACCTGTGACAAACTGGAGGAACTTGGCACGGTCAGCT +
Preference number: 6 (lower is better)
Translates to: MPFMPSRAAKPCRGT*EVPVTNWRNLARSA
Trigger: AGCTGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCTCGAAGGCATGAATGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CAA 90 bp TTCCTATGGGGAATTCCTATTAGGGAGGGCAGCACCTCCCTAAATTaGAGGCTAGAGCAAGCCATCGCTACTGTGCAGGAGGCCCCACCT +
Preference number: 6 (lower is better)
Translates to: FLWGIPIREGSTSLN*RLEQAIATVQEAPP
Trigger: AGGTGGGGCCTCCTGCACAGTAGCGATGGCTTGCTCTAGCCTCAAATTTAGGGAGGTGCTGCCCTCCCTAATAGGAATTCCCCATAGGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000480438.1
CDS TCA 72 bp GTGTTGGCCATGTTGGGACTGGACAGGTCTAAGCTGTaGGGTACTCTGGCCAGGTCATTAACCAGTCCCTTC +
Preference number: 6 (lower is better)
Translates to: VLAMLGLDRSKL*GTLARSLTSPF
Trigger: GAAGGGACTGGTTAATGACCTGGCCAGAGTACCTCACAGCTTAGACCTGTCCAGTCCCAACATGGCCAACAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CCTCCAGCTCATTCTCAACCTGCATCTCTTGTGAACTaGGCACCTCAGGCTGCCCAGCAATCACCACTGAGT +
Preference number: 6 (lower is better)
Translates to: PPAHSQPASLVN*APQAAQQSPLS
Trigger: ACTCAGTGGTGATTGCTGGGCAGCCTGAGGTGCTCAGTTCACAAGAGATGCAGGTTGAGAATGAGCTGGAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp AATCTTCTCGGTTGGCCTGCAAGGTGGAAGCTTGGCTaGGGTTGGAAGGAGCTTCATCCATCAGCACGTCCT +
Preference number: 6 (lower is better)
Translates to: NLLGWPARWKLG*GWKELHPSARP
Trigger: AGGACGTGCTGATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TCCGACGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGTATAATGGCATCAGCC +
Preference number: 6 (lower is better)
Translates to: SDVAACCCLRAL*PSRTICIMASA
Trigger: GGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GCATGTCCCACAGCTCGTCCAAACTCAGCTGCTCGCTaGGCAGGGGTAACTCAGGTGGTCTTTCTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: ACPTARPNSAAR*AGVTQVVFLPF
Trigger: AAAAGGAAGAAAGACCACCTGAGTTACCCCTGCTCAGCGAGCAGCTGAGTTTGGACGAGCTGTGGGACATGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000463852.1
ENST00000612484.4
CDS GCA 72 bp GGTGGGTTAAAAGGTACTCTGTGGCCTGCTCCATGGTaGTGGTGTTCAACAGTGCCTCCATTGCATGTTCCC +
Preference number: 6 (lower is better)
Translates to: GGLKGTLWPAPW*WCSTVPPLHVP
Trigger: GGGAACATGCAATGGAGGCACTGTTGAACACCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GACCGGTACTGCTGGTATACATCATCACCCATGTCTTaGAGGAGCTGGCCAACCTCTTGGGTCATAACCCCA +
Preference number: 6 (lower is better)
Translates to: DRYCWYTSSPMS*RSWPTSWVITP
Trigger: TGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGATGTATACCAGCAGTACCGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GTCGGTTTCAGCCTCCCCATCCATGATATCCCCATCTaGCACCTCTGTCTGAGTGACATCATGATCCTCCTC +
Preference number: 6 (lower is better)
Translates to: VGFSLPIHDIPI*HLCLSDIMILL
Trigger: GAGGAGGATCATGATGTCACTCAGACAGAGGTGGCAGATGGGGATATCATGGATGGGGAGGCTGAAACCGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GGGTCCAGGATATTCATGGAATCTTCTCGGTTGGCCTaGAAGGTGGAAGCTTGGCTGAGGTTGGAAGGAGCT +
Preference number: 6 (lower is better)
Translates to: GSRIFMESSRLA*KVEAWLRLEGA
Trigger: AGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATATCCTGGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CTGGAGCTCCCGGCCACCCAAAGGTCGCTTCTGAGATaGCACAATTACCACATTCTCAGCCATGTCAAACCT +
Preference number: 6 (lower is better)
Translates to: LELPATQRSLLR*HNYHILSHVKP
Trigger: AGGTTTGACATGGCTGAGAATGTGGTAATTGTGGCATCTCAGAAGCGACCTTTGGGTGGCCGGGAGCTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS GCA 72 bp GGGTCGTGGACTGCCGTAGGATCTGGTTTAACACAGTaGGGTGAGTCTCTGCAAAGCGAAGGAACTTCTGTG +
Preference number: 6 (lower is better)
Translates to: GSWTAVGSGLTQ*GESLQSEGTSV
Trigger: CACAGAAGTTCCTTCGCTTTGCAGAGACTCACCGCACTGTGTTAAACCAGATCCTACGGCAGTCCACGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 72 bp CTGGTAATCGGACCTCTGCTGAGCTCTTTAGACTTTTaGTCCCTGCAACTCCTCCTTGCTCCAGTCACGCTG +
Preference number: 6 (lower is better)
Translates to: LVIGPLLSSLDF*SLQLLLAPVTL
Trigger: CAGCGTGACTGGAGCAAGGAGGAGTTGCAGGGAGCAAAAGTCTAAAGAGCTCAGCAGAGGTCCGATTACCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CCA 72 bp GCTCCATCCTGTTCCCCATCTGATCTTTTTCCGCCCTaGGTCGTACCTGCCTTCTCATCCTTTGGAACCAGT +
Preference number: 6 (lower is better)
Translates to: APSCSPSDLFPP*VVPAFSSFGTS
Trigger: ACTGGTTCCAAAGGATGAGAAGGCAGGTACGACCCAGGGCGGAAAAAGATCAGATGGGGAACAGGATGGAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
CDS CCA 72 bp CTGGACACCTCCAGGCAATTTGGCAGGCAGCGAATGTaGAGATTCAAGCACCGTGGTGGGATTCACCATCTT +
Preference number: 6 (lower is better)
Translates to: LDTSRQFGRQRM*RFKHRGGIHHL
Trigger: AAGATGGTGAATCCCACCACGGTGCTTGAATCTCCACATTCGCTGCCTGCCAAATTGCCTGGAGGTGTCCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp AGATCCCGAACAACTCCTCCCATGATTGGAGGAGGGTaGGTTAAAAGGTACTCTGTGGCCTGCTCCATGGTG +
Preference number: 6 (lower is better)
Translates to: RSRTTPPMIGGG*VKRYSVACSMV
Trigger: CACCATGGAGCAGGCCACAGAGTACCTTTTAACCCACCCTCCTCCAATCATGGGAGGAGTTGTTCGGGATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CACTTCTGTGAATATGTCTGGATTGCGGCATGCGGCTaGCCCAAGGACACGAAGGATGTAGTTGATCTCCCG +
Preference number: 6 (lower is better)
Translates to: HFCEYVWIAACG*PKDTKDVVDLP
Trigger: CGGGAGATCAACTACATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp ATGGAATCTTCTCGGTTGGCCTGCAAGGTGGAAGCTTaGCTGAGGTTGGAAGGAGCTTCATCCATCAGCACG +
Preference number: 6 (lower is better)
Translates to: MESSRLACKVEA*LRLEGASSIST
Trigger: CGTGCTGATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCAT
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp ACAGCAGGCTGTAGCACTAGCACCGCATGCTGGTCATaGGATTCCTCTAGTTCCTTTAGACACTCCCCAAGC +
Preference number: 6 (lower is better)
Translates to: TAGCSTSTACWS*DSSSSFRHSPS
Trigger: GCTTGGGGAGTGTCTAAAGGAACTAGAGGAATCCCATGACCAGCATGCGGTGCTAGTGCTACAGCCTGCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp ACTGCTCCAACAGCTTCCCGAACCTTCCTGACCAAGTaGGCCTGCTGGTTTCTCTGGATCACTAACCCACTC +
Preference number: 6 (lower is better)
Translates to: TAPTASRTFLTK*ACWFLWITNPL
Trigger: GAGTGGGTTAGTGATCCAGAGAAACCAGCAGGCCAACTTGGTCAGGAAGGTTCGGGAAGCTGTTGGAGCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
CDS CAA 72 bp ATACAGCAGTTGGCCACTTCTGTGAATATGTCTGGATaGCGGCATGCGGCTGGCCCAAGGACACGAAGGATG +
Preference number: 6 (lower is better)
Translates to: IQQLATSVNMSG*RHAAGPRTRRM
Trigger: CATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAACTGCTGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp GAAACACAGTCATGCATGCTCTCAGCATCGAGAACTTaGCATTCTTCTGTCCAGCGGGTCAGGGCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: ETQSCMLSASRT*HSSVQRVRAVG
Trigger: CCCCACAGCCCTGACCCGCTGGACAGAAGAATGCAAAGTTCTCGATGCTGAGAGCATGCATGACTGTGTTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp AGCCAGGAAAGCTGGTTGGAGCTCTTTGACTCCATCTaGTGTAGCAGGTCCAGGGGACGGTTCTCATGGCTA +
Preference number: 6 (lower is better)
Translates to: SQESWLELFDSI*CSRSRGRFSWL
Trigger: TAGCCATGAGAACCGTCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp TGGATACTGAGAGCCAGGAAAGCTGGTTGGAGCTCTTaGACTCCATCTTGTGTAGCAGGTCCAGGGGACGGT +
Preference number: 6 (lower is better)
Translates to: WILRARKAGWSS*TPSCVAGPGDG
Trigger: ACCGTCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp CCGCCAGCGCTCACTGGCACTGACTTCACGGAGTTCTaGCCTTTCCGGCTGACATTCATGTTGTCCAGTTTT +
Preference number: 6 (lower is better)
Translates to: PPALTGTDFTEF*PFRLTFMLSSF
Trigger: AAAACTGGACAACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCTGGCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp CTCCGACGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTGTATAATGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: LRRCCLLLSPRP*TLTYHLYNGIS
Trigger: GCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGTCGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp ATGCCTTCGAGGGCAGCAAAGCCTTGCAGGGGTACCTaGGAAGTACCTGTGACAAACTGGAGGAACTTGGCA +
Preference number: 6 (lower is better)
Translates to: MPSRAAKPCRGT*EVPVTNWRNLA
Trigger: TGCCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCTCGAAGGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CAA 90 bp TCCTCCTCATCCTCAGGGTCCAGGATATTCATGGAATCTTCTCGGTaGGCCTGCAAGGTGGAAGCTTGGCTGAGGTTGGAAGGAGCTTCA +
Preference number: 6 (lower is better)
Translates to: SSSSSGSRIFMESSR*ACKVEAWLRLEGAS
Trigger: TGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATATCCTGGACCCTGAGGATGAGGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp GATACTGAGAGCCAGGAAAGCTGGTTGGAGCTCTTTGACTCCATCTaGTGTAGCAGGTCCAGGGGACGGTTCTCATGGCTACTTGACCCA +
Preference number: 6 (lower is better)
Translates to: DTESQESWLELFDSI*CSRSRGRFSWLLDP
Trigger: TGGGTCAAGTAGCCATGAGAACCGTCCCCTGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp TTGAATGAGTGTATCCAAAACGTGTCTGCAGACAACAGGAGCAGCTaGGGGATGGATGTGGACGGTGGAGCCACCGCTTGCATGCTTCTC +
Preference number: 6 (lower is better)
Translates to: LNECIQNVSADNRSS*GMDVDGGATACMLL
Trigger: GAGAAGCATGCAAGCGGTGGCTCCACCGTCCACATCCATCCCCAAGCTGCTCCTGTTGTCTGCAGACACGTTTTGGATACACTCATTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp TCCCCCTCACCGCCAGCGCTCACTGGCACTGACTTCACGGAGTTCTaGCCTTTCCGGCTGACATTCATGTTGTCCAGTTTTACCAATAAG +
Preference number: 6 (lower is better)
Translates to: SPSPPALTGTDFTEF*PFRLTFMLSSFTNK
Trigger: CTTATTGGTAAAACTGGACAACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAGTGAGCGCTGGCGGTGAGGGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp AGGCATCATGCTAACCGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTGTATAATGGCATCAGCCTCAGCCTC +
Preference number: 6 (lower is better)
Translates to: RHHANRCCLLLSPRP*TLTYHLYNGISLSL
Trigger: GAGGCTGAGGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGGTTAGCATGATGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474288.1
CDS TCA 72 bp ATGATGGCAGTCGTTGCATCTGTTTTAAGGGTGGGCTaGTGTCTCATGAGCTCATCGACAGCACTCCCCAGG +
Preference number: 6 (lower is better)
Translates to: MMAVVASVLRVG*CLMSSSTALPR
Trigger: CCTGGGGAGTGCTGTCGATGAGCTCATGAGACATCAGCCCACCCTTAAAACAGATGCAACGACTGCCATCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GTTCTGCAAACATCATGGCATATTTGTGGTCCCGGGTaGGCCTCAGACAGAGACGAAGGGTGGCATGCAAAG +
Preference number: 6 (lower is better)
Translates to: VLQTSWHICGPG*ASDRDEGWHAK
Trigger: CTTTGCATGCCACCCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CCTGTGACAAACTGGAGGAACTTGGCACGGTCAGCTTaGTCGAAAGAACGCAATGCTCTCCAGAACCACTGG +
Preference number: 6 (lower is better)
Translates to: PVTNWRNLARSA*SKERNALQNHW
Trigger: CCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTGTCACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS TCA 72 bp CAGCAAAGCCTTGCAGGGGTACCTTGGAAGTACCTGTaGCAAACTGGAGGAACTTGGCACGGTCAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: QQSLAGVPWKYL*QTGGTWHGQLD
Trigger: ATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGGCTTTGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS TCA 72 bp CTAACCGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTTaGCCCTCACGTACCATTTGTATAATGGCATCAGCC +
Preference number: 6 (lower is better)
Translates to: LTVAACCCLRAL*PSRTICIMASA
Trigger: GGCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474288.1
CDS GCA 72 bp AAAGGCTGCTTTCTGAGTTACCACAAGGAAGCGCAGTaGACTGAACTGGGGAAAGTTCTGGACACCTCCAGG +
Preference number: 6 (lower is better)
Translates to: KGCFLSYHKEAQ*TELGKVLDTSR
Trigger: CCTGGAGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCGCTTCCTTGTGGTAACTCAGAAAGCAGCCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CATGCAAAGTATCTGGGTCCACAGGGACTCCCAGCATaGTCACGCAGGCCCGGATTAAAACAGTCACCATAT +
Preference number: 6 (lower is better)
Translates to: HAKYLGPQGLPA*SRRPGLKQSPY
Trigger: ATATGGTGACTGTTTTAATCCGGGCCTGCGTGAGCATGCTGGGAGTCCCTGTGGACCCAGATACTTTGCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GTTGGCCACTTCTGTGAATATGTCTGGATTGCGGCATaGGGCTGGCCCAAGGACACGAAGGATGTAGTTGAT +
Preference number: 6 (lower is better)
Translates to: VGHFCEYVWIAA*GWPKDTKDVVD
Trigger: ATCAACTACATCCTTCGTGTCCTTGGGCCAGCCGCATGCCGCAATCCAGACATATTCACAGAAGTGGCCAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CATCCTGACTATCATCCTCATCCTCGTTACTGCCACTaGTGTCCTCTTCCTGAGTGTGCTCCTCCTCATCCT +
Preference number: 6 (lower is better)
Translates to: HPDYHPHPRYCH*CPLPECAPPHP
Trigger: AGGATGAGGAGGAGCACACTCAGGAAGAGGACAGCAGTGGCAGTAACGAGGATGAGGATGATAGTCAGGATG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CCTCTTCATCCTGACTATCATCCTCATCCTCGTTACTaGCACTGCTGTCCTCTTCCTGAGTGTGCTCCTCCT +
Preference number: 6 (lower is better)
Translates to: PLHPDYHPHPRY*HCCPLPECAPP
Trigger: AGGAGGAGCACACTCAGGAAGAGGACAGCAGTGGCAGTAACGAGGATGAGGATGATAGTCAGGATGAAGAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp AAACACAGTCATGCATGCTCTCAGCATCGAGAACTTTaGATTCTTCTGTCCAGCGGGTCAGGGCTGTGGGGA +
Preference number: 6 (lower is better)
Translates to: KHSHACSQHREL*ILLSSGSGLWG
Trigger: TCCCCACAGCCCTGACCCGCTGGACAGAAGAATGCAAAGTTCTCGATGCTGAGAGCATGCATGACTGTGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp GAGGGTGGGTTAAAAGGTACTCTGTGGCCTGCTCCATaGTGCTGGTGTTCAACAGTGCCTCCATTGCATGTT +
Preference number: 6 (lower is better)
Translates to: EGGLKGTLWPAP*CWCSTVPPLHV
Trigger: AACATGCAATGGAGGCACTGTTGAACACCAGCACCATGGAGCAGGCCACAGAGTACCTTTTAACCCACCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TGTGCTCCTCCTCATCCTCAGGGTCCAGGATATTCATaGAATCTTCTCGGTTGGCCTGCAAGGTGGAAGCTT +
Preference number: 6 (lower is better)
Translates to: CAPPHPQGPGYS*NLLGWPARWKL
Trigger: AAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATATCCTGGACCCTGAGGATGAGGAGGAGCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TCCATCTTGTGTAGCAGGTCCAGGGGACGGTTCTCATaGCTACTTGACCCACAGCTCTTGCTCGACTTTTTG +
Preference number: 6 (lower is better)
Translates to: SILCSRSRGRFS*LLDPQLLLDFL
Trigger: CAAAAAGTCGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAACCGTCCCCTGGACCTGCTACACAAGATGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp CCAATAAGTCCCAGAAGTCTGTGCAAATGCCACTGCTaGAGGACTGTGAGGAGCATGGGCTACAGGCCTTAT +
Preference number: 6 (lower is better)
Translates to: PISPRSLCKCHC*RTVRSMGYRPY
Trigger: ATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCTGGGACTTATTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp ATGGGTGATTCCTCCCTCCGGACAGACGCCTCTGACTaGCTAGACTCCGACTGGATAAAAGGGAGACAAAAA +
Preference number: 6 (lower is better)
Translates to: MGDSSLRTDASD*LDSDWIKGRQK
Trigger: TTTTTGTCTCCCTTTTATCCAGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAGGGAGGAATCACCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS CAA 72 bp CACCAACGCCCAGAGCGATCATCAAACCAGCGCCAGTaGTTGCTGTTGGATTGCAGGTACTTAGTCATCTGG +
Preference number: 6 (lower is better)
Translates to: HQRPERSSNQRQ*LLLDCRYLVIW
Trigger: CCAGATGACTAAGTACCTGCAATCCAACAGCAACAACTGGCGCTGGTTTGATGATCGCTCTGGGCGTTGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CGGGTACTCTTCAGTTCTGCAAACATCATGGCATATTaGTGGTCCCGGGTGAGCCTCAGACAGAGACGAAGG +
Preference number: 6 (lower is better)
Translates to: RVLFSSANIMAY*WSRVSLRQRRR
Trigger: CCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAACTGAAGAGTACCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp GTCCTGCTGGTTGCTACTGGAATCTTGAGAGGCTCCTaGGGCATCCTGCTCAGACTTGTTCTTGCTAGAAGC +
Preference number: 6 (lower is better)
Translates to: VLLVATGILRGS*GILLRLVLARS
Trigger: GCTTCTAGCAAGAACAAGTCTGAGCAGGATGCCCAAGGAGCCTCTCAAGATTCCAGTAGCAACCAGCAGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TCCTCAGGGTCCAGGATATTCATGGAATCTTCTCGGTaGGCCTGCAAGGTGGAAGCTTGGCTGAGGTTGGAA +
Preference number: 6 (lower is better)
Translates to: SSGSRIFMESSR*ACKVEAWLRLE
Trigger: TTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCATGAATATCCTGGACCCTGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp ACTCCATCTGAGTTGTTTCTGCTTCCCCACTTGGCCTaGTGGGACCCAATTCCTCTGGCTCTACAGGCATCA +
Preference number: 6 (lower is better)
Translates to: TPSELFLLPHLA*WDPIPLALQAS
Trigger: TGATGCCTGTAGAGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAACAACTCAGATGGAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp GGGATAACTCCATCTGAGTTGTTTCTGCTTCCCCACTaGGCCTTGTGGGACCCAATTCCTCTGGCTCTACAG +
Preference number: 6 (lower is better)
Translates to: GITPSELFLLPH*ALWDPIPLALQ
Trigger: CTGTAGAGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAACAACTCAGATGGAGTTATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TGTGTAGCAGGTCCAGGGGACGGTTCTCATGGCTACTaGACCCACAGCTCTTGCTCGACTTTTTGCCCTTTT +
Preference number: 6 (lower is better)
Translates to: CVAGPGDGSHGY*THSSCSTFCPF
Trigger: AAAAGGGCAAAAAGTCGAGCAAGAGCTGTGGGTCAAGTAGCCATGAGAACCGTCCCCTGGACCTGCTACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp CTGGAGGACTGTGAGGAGCATGGGCTACAGGCCTTATaGCCCCTTTCCCGATCACTCTCACAGTTTGTTTCT +
Preference number: 6 (lower is better)
Translates to: LEDCEEHGLQAL*PLSRSLSQFVS
Trigger: AGAAACAAACTGTGAGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp CTGAATGCCATTCATGCCTTCGAGGGCAGCAAAGCCTaGCAGGGGTACCTTGGAAGTACCTGTGACAAACTG +
Preference number: 6 (lower is better)
Translates to: LNAIHAFEGSKA*QGYLGSTCDKL
Trigger: CAGTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCTCGAAGGCATGAATGGCATTCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CAA 72 bp GCTAACCGTTGCTGCTTGTTGCTGTCTCCGCGCCCTTaGACCCTCACGTACCATTTGTATAATGGCATCAGC +
Preference number: 6 (lower is better)
Translates to: ANRCCLLLSPRP*TLTYHLYNGIS
Trigger: GCTGATGCCATTATACAAATGGTACGTGAGGGTCAAAGGGCGCGGAGACAGCAACAAGCAGCAACGGTTAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000474288.1
CDS CAA 72 bp GGAATTCCTATTAGGGAGGGCAGCACCTCCCTAAATTaGAGGCTAGAGCAAGCCATCGCTACTGTGCAGGAG +
Preference number: 6 (lower is better)
Translates to: GIPIREGSTSLN*RLEQAIATVQE
Trigger: CTCCTGCACAGTAGCGATGGCTTGCTCTAGCCTCAAATTTAGGGAGGTGCTGCCCTCCCTAATAGGAATTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000480438.1
CDS CAA 72 bp ACTGGTAATCGGACCTCTGCTGAGCTCTTTAGACTTTaGCTCCCTGCAACTCCTCCTTGCTCCAGTCACGCT +
Preference number: 6 (lower is better)
Translates to: TGNRTSAELFRL*LPATPPCSSHA
Trigger: AGCGTGACTGGAGCAAGGAGGAGTTGCAGGGAGCAAAAGTCTAAAGAGCTCAGCAGAGGTCCGATTACCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 90 bp AAGATCATGCGGGTACTCTTCAGTTCTGCAAACATCATGGCATATTaGTGGTCCCGGGTGAGCCTCAGACAGAGACGAAGGGTGGCATGC +
Preference number: 6 (lower is better)
Translates to: KIMRVLFSSANIMAY*WSRVSLRQRRRVAC
Trigger: GCATGCCACCCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAACTGAAGAGTACCCGCATGATCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp ATGGAATCTTCTCGGTTGGCCTGCAAGGTGGAAGCTTGGCTGAGGTaGGAAGGAGCTTCATCCATCAGCACGTCCTCTTGTGATTCATCC +
Preference number: 6 (lower is better)
Translates to: MESSRLACKVEAWLR*EGASSISTSSCDSS
Trigger: GGATGAATCACAAGAGGACGTGCTGATGGATGAAGCTCCTTCCAACCTCAGCCAAGCTTCCACCTTGCAGGCCAACCGAGAAGATTCCAT
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CTGGGGATAACTCCATCTGAGTTGTTTCTGCTTCCCCACTTGGCCTaGTGGGACCCAATTCCTCTGGCTCTACAGGCATCAATAGCTGTG +
Preference number: 6 (lower is better)
Translates to: LGITPSELFLLPHLA*WDPIPLALQASIAV
Trigger: CACAGCTATTGATGCCTGTAGAGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAACAACTCAGATGGAGTTATCCCCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp TGGGAGCTGGGGATAACTCCATCTGAGTTGTTTCTGCTTCCCCACTaGGCCTTGTGGGACCCAATTCCTCTGGCTCTACAGGCATCAATA +
Preference number: 6 (lower is better)
Translates to: WELGITPSELFLLPH*ALWDPIPLALQASI
Trigger: TATTGATGCCTGTAGAGCCAGAGGAATTGGGTCCCACAAGGCCAAGTGGGGAAGCAGAAACAACTCAGATGGAGTTATCCCCAGCTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp AGAAGACGAAGGATAGTGGAGGTAGGCATTAAAGGTTTGCTGCCCTaGCCTTTCTGTTTGCCTTCCTCAGAGGCCCGGTCCCCTTCTTTA +
Preference number: 6 (lower is better)
Translates to: RRRRIVEVGIKGLLP*PFCLPSSEARSPSL
Trigger: TAAAGAAGGGGACCGGGCCTCTGAGGAAGGCAAACAGAAAGGCAAGGGCAGCAAACCTTTAATGCCTACCTCCACTATCCTTCGTCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp AGTGTTGGTTGCTGTTGTGAGGATTGCAGAGTGCCAAGGGTCTCCTaGGACTCAGATGTAGCTGCATCAGTTGAAGATGGGGTTGTTGGG +
Preference number: 6 (lower is better)
Translates to: SVGCCCEDCRVPRVS*DSDVAASVEDGVVG
Trigger: CCCAACAACCCCATCTTCAACTGATGCAGCTACATCTGAGTCCAAGGAGACCCTTGGCACTCTGCAATCCTCACAACAGCAACCAACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp GTGGAGGAAGCACCGCTGCCAGAATTAGCCTGTGCTTCTGACACCTaGTTTTCTGGGAGAGCAATTGAGATGAGAGAAAGGAGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: VEEAPLPELACASDT*FSGRAIEMRERSLR
Trigger: CCTCAGACTCCTTTCTCTCATCTCAATTGCTCTCCCAGAAAACAAGGTGTCAGAAGCACAGGCTAATTCTGGCAGCGGTGCTTCCTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS TCA 72 bp AAGACTGAAGACCTCGGGCATTCAAACAGAGTGCACTaGATACATTTGGGAGGGAGCCAAGGACTTCACGGG +
Preference number: 6 (lower is better)
Translates to: KTEDLGHSNRVH*IHLGGSQGLHG
Trigger: CCCGTGAAGTCCTTGGCTCCCTCCCAAATGTATTCAGTGCACTCTGTTTGAATGCCCGAGGTCTTCAGTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000489876.1
ENST00000612484.4
CDS TCA 72 bp CTGCTTTCTGAGTTACCACAAGGAAGCGCAGTGCACTaGACTGGGGAAAGTTCTGGACACCTCCAGGCAATT +
Preference number: 6 (lower is better)
Translates to: LLSELPQGSAVH*TGESSGHLQAI
Trigger: AATTGCCTGGAGGTGTCCAGAACTTTCCCCAGTTCAGTGCACTGCGCTTCCTTGTGGTAACTCAGAAAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GTAGCCAAATTGGAGGCCTGGGGCAGTGTGGCCATCTaGCTTATCCACTCTGACACGGTTTTTGTGTCACTT +
Preference number: 6 (lower is better)
Translates to: VAKLEAWGSVAI*LIHSDTVFVSL
Trigger: AAGTGACACAAAAACCGTGTCAGAGTGGATAAGTCAGATGGCCACACTGCCCCAGGCCTCCAATTTGGCTAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp GAGAAGGGTGACCAGGGGAGTAAACCCATTGAAGCCTaGGCTCTGGGTCAAATTCAAGATCATGCGGGTACT +
Preference number: 6 (lower is better)
Translates to: EKGDQGSKPIEA*ALGQIQDHAGT
Trigger: AGTACCCGCATGATCTTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTTACTCCCCTGGTCACCCTTCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CTGGACAGGGTTCCTGCTTGGCTGGTAGCTGTGCTCTaGTCATGGAAAAAGTCATCCAGCAGCTCATCATCA +
Preference number: 6 (lower is better)
Translates to: LDRVPAWLVAVL*SWKKSSSSSSS
Trigger: TGATGATGAGCTGCTGGATGACTTTTTCCATGATCAGAGCACAGCTACCAGCCAAGCAGGAACCCTGTCCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp AAGGGTCTCCTTGGACTCAGATGTAGCTGCATCAGTTaGAGATGGGGTTGTTGGGTAGCTGTCAGGCATAGG +
Preference number: 6 (lower is better)
Translates to: KGLLGLRCSCIS*RWGCWVAVRHR
Trigger: CCTATGCCTGACAGCTACCCAACAACCCCATCTTCAACTGATGCAGCTACATCTGAGTCCAAGGAGACCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TCCCAAACTGGCCATCAGGCACCAAAACCAAAAATCTaGCCCTGTCACTCCTCCTTAAACACCCTGGCCTCA +
Preference number: 6 (lower is better)
Translates to: SQTGHQAPKPKI*PCHSSLNTLAS
Trigger: TGAGGCCAGGGTGTTTAAGGAGGAGTGACAGGGTCAGATTTTTGGTTTTGGTGCCTGATGGCCAGTTTGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS GCA 72 bp CCAATCATACTCATCCTGGTGGGAAATTCCCCACACTaGTCCAACAGCTTCCCGAACCTTCCTGACCAAGTT +
Preference number: 6 (lower is better)
Translates to: PIILILVGNSPH*SNSFPNLPDQV
Trigger: AACTTGGTCAGGAAGGTTCGGGAAGCTGTTGGAGCAGTGTGGGGAATTTCCCACCAGGATGAGTATGATTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
CDS GCA 72 bp TGGAGGACTGTGAGGAGCATGGGCTACAGGCCTTATTaGCCCTTTCCCGATCACTCTCACAGTTTGTTTCTT +
Preference number: 6 (lower is better)
Translates to: WRTVRSMGYRPY*PFPDHSHSLFL
Trigger: AAGAAACAAACTGTGAGAGTGATCGGGAAAGGGGCAATAAGGCCTGTAGCCCATGCTCCTCACAGTCCTCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 72 bp CCAGTTTTACCAATAAGTCCCAGAAGTCTGTGCAAATaGCACTGCTGGAGGACTGTGAGGAGCATGGGCTAC +
Preference number: 6 (lower is better)
Translates to: PVLPISPRSLCK*HCWRTVRSMGY
Trigger: GTAGCCCATGCTCCTCACAGTCCTCCAGCAGTGGCATTTGCACAGACTTCTGGGACTTATTGGTAAAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp AGTCTCTCTCGAATCACAGGTTCTCCTCGGAGGATGTaGCATAGAATGGCCAGCATCGATTCAGCCATTCGT +
Preference number: 6 (lower is better)
Translates to: SLSRITGSPRRM*HRMASIDSAIR
Trigger: ACGAATGGCTGAATCGATGCTGGCCATTCTATGCCACATCCTCCGAGGAGAACCTGTGATTCGAGAGAGACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TATTCAGCCGAGGTACCCTGCACCATTGTAGTGAATTaGACCGTGTATCTTCTTCGGCCTGCAGTGAATCGC +
Preference number: 6 (lower is better)
Translates to: YSAEVPCTIVVN*TVYLLRPAVNR
Trigger: GCGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATGGTGCAGGGTACCTCGGCTGAATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218328.12
CDS CCA 72 bp GTACTCTTCAGTTCTGCAAACATCATGGCATATTTGTaGTCCCGGGTGAGCCTCAGACAGAGACGAAGGGTG +
Preference number: 6 (lower is better)
Translates to: VLFSSANIMAYL*SRVSLRQRRRV
Trigger: CACCCTTCGTCTCTGTCTGAGGCTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAACTGAAGAGTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TGCTGGTATACATCATCACCCATGTCTTGCAGGAGCTaGCCAACCTCTTGGGTCATAACCCCAGGTTTAGGA +
Preference number: 6 (lower is better)
Translates to: CWYTSSPMSCRS*PTSWVITPGLG
Trigger: TCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGATGTATACCAGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TCCTTGTCTTCTGCATTCTGGGTATGTGGGAGCAGGTaGTCCAGAACAAAAGCTAGCACACTGCAGTCCTCT +
Preference number: 6 (lower is better)
Translates to: SLSSAFWVCGSR*SRTKASTLQSS
Trigger: AGAGGACTGCAGTGTGCTAGCTTTTGTTCTGGACCACCTGCTCCCACATACCCAGAATGCAGAAGACAAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CTGCATCCATGGATACTGAGAGCCAGGAAAGCTGGTTaGAGCTCTTTGACTCCATCTTGTGTAGCAGGTCCA +
Preference number: 6 (lower is better)
Translates to: LHPWILRARKAG*SSLTPSCVAGP
Trigger: TGGACCTGCTACACAAGATGGAGTCAAAGAGCTCCAACCAGCTTTCCTGGCTCTCAGTATCCATGGATGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp TTCCATCGGAGGCAATGGATTGAGTATCTTGAGCACTaGGAGATGGCTGGTCCACATCCATGGGTGATTCCT +
Preference number: 6 (lower is better)
Translates to: FHRRQWIEYLEH*EMAGPHPWVIP
Trigger: AGGAATCACCCATGGATGTGGACCAGCCATCTCCCAGTGCTCAAGATACTCAATCCATTGCCTCCGATGGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000463852.1
ENST00000612484.4
CDS CCA 72 bp CTCCGGACAGACGCCTCTGACTGGCTAGACTCCGACTaGATAAAAGGGAGACAAAAATCACATAAGGGTGCA +
Preference number: 6 (lower is better)
Translates to: LRTDASDWLDSD*IKGRQKSHKGA
Trigger: TGCACCCTTATGTGATTTTTGTCTCCCTTTTATCCAGTCGGAGTCTAGCCAGTCAGAGGCGTCTGTCCGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS CAA 72 bp CCAGAGCGATCATCAAACCAGCGCCAGTTGTTGCTGTaGGATTGCAGGTACTTAGTCATCTGGGCTCTCCTT +
Preference number: 6 (lower is better)
Translates to: PERSSNQRQLLL*DCRYLVIWALL
Trigger: AAGGAGAGCCCAGATGACTAAGTACCTGCAATCCAACAGCAACAACTGGCGCTGGTTTGATGATCGCTCTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp GTAGGCATTAAAGGTTTGCTGCCCTTGCCTTTCTGTTaGCCTTCCTCAGAGGCCCGGTCCCCTTCTTTATCT +
Preference number: 6 (lower is better)
Translates to: VGIKGLLPLPFC*PSSEARSPSLS
Trigger: AGATAAAGAAGGGGACCGGGCCTCTGAGGAAGGCAAACAGAAAGGCAAGGGCAGCAAACCTTTAATGCCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp CTGCTGCTGCCCCCATCACTCACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGAGAAATTGAAACAGTA +
Preference number: 6 (lower is better)
Translates to: LLLPPSLTFAGD*LPLVVGEIETV
Trigger: TACTGTTTCAATTTCTCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGTGAGTGATGGGGGCAGCAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp ACCTGTGACAAACTGGAGGAACTTGGCACGGTCAGCTaGATCGAAAGAACGCAATGCTCTCCAGAACCACTG +
Preference number: 6 (lower is better)
Translates to: TCDKLEELGTVS*IERTQCSPEPL
Trigger: CAGTGGTTCTGGAGAGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CAA 90 bp ATAGTGGAGGTAGGCATTAAAGGTTTGCTGCCCTTGCCTTTCTGTTaGCCTTCCTCAGAGGCCCGGTCCCCTTCTTTATCTTTCTTCCCA +
Preference number: 6 (lower is better)
Translates to: IVEVGIKGLLPLPFC*PSSEARSPSLSFFP
Trigger: TGGGAAGAAAGATAAAGAAGGGGACCGGGCCTCTGAGGAAGGCAAACAGAAAGGCAAGGGCAGCAAACCTTTAATGCCTACCTCCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp AAGTCTGTACTGCTGCTGCCCCCATCACTCACCTTCGCTGGAGATTaGCTGCCCTTAGTAGTGGGAGAAATTGAAACAGTAGTGGTAGCA +
Preference number: 6 (lower is better)
Translates to: KSVLLLPPSLTFAGD*LPLVVGEIETVVVA
Trigger: TGCTACCACTACTGTTTCAATTTCTCCCACTACTAAGGGCAGCAAATCTCCAGCGAAGGTGAGTGATGGGGGCAGCAGCAGTACAGACTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000468322.2
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp ATGATGACCTGTAGTACCCTCAAGAAGAACTTCTGGGTAGATGTCTaGGATGTCAACATGGACATAGAAGGCAGCTGGAGCTCCCGGCCA +
Preference number: 6 (lower is better)
Translates to: MMTCSTLKKNFWVDV*DVNMDIEGSWSSRP
Trigger: TGGCCGGGAGCTCCAGCTGCCTTCTATGTCCATGTTGACATCCAAGACATCTACCCAGAAGTTCTTCTTGAGGGTACTACAGGTCATCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 90 bp CTGAAACTTCTGAATGCCATTCATGCCTTCGAGGGCAGCAAAGCCTaGCAGGGGTACCTTGGAAGTACCTGTGACAAACTGGAGGAACTT +
Preference number: 6 (lower is better)
Translates to: LKLLNAIHAFEGSKA*QGYLGSTCDKLEEL
Trigger: AAGTTCCTCCAGTTTGTCACAGGTACTTCCAAGGTACCCCTGCAAGGCTTTGCTGCCCTCGAAGGCATGAATGGCATTCAGAAGTTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS TCA 72 bp GTGGCAGTGCCATCTGCCTTCTGGATTGATGGCTTCTaGCAGATGTATTTGGGGTCCCTTCCAAGATTACAG +
Preference number: 6 (lower is better)
Translates to: VAVPSAFWIDGF*QMYLGSLPRLQ
Trigger: CTGTAATCTTGGAAGGGACCCCAAATACATCTGTCAGAAGCCATCAATCCAGAAGGCAGATGGCACTGCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp AGTGTCAATATGGATTTGCAGACACCTGCAACAGCCTaGCAGGCAGCAGATGTGGGAAAGTCAATGGGCAGA +
Preference number: 6 (lower is better)
Translates to: SVNMDLQTPATA*QAADVGKSMGR
Trigger: TCTGCCCATTGACTTTCCCACATCTGCTGCCTGTCAGGCTGTTGCAGGTGTCTGCAAATCCATATTGACACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TTCCGGCAAGCAACTTCCTCAGGTGACTCTGCCCTTTaGTCCATTGGAATATCCTGTCCCAGAGACATAGCA +
Preference number: 6 (lower is better)
Translates to: FRQATSSGDSAL*SIGISCPRDIA
Trigger: TGCTATGTCTCTGGGACAGGATATTCCAATGGATCAAAGGGCAGAGTCACCTGAGGAAGTTGCTTGCCGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp AGGAGAAACAAACCCTTCCTTTTACCATGTGTGAGCTaGAGGCAGGCGATCTGTGGACCTGTCATCTCGATG +
Preference number: 6 (lower is better)
Translates to: RRNKPFLLPCVS*RQAICGPVISM
Trigger: CATCGAGATGACAGGTCCACAGATCGCCTGCCTTCAGCTCACACATGGTAAAAGGAAGGGTTTGTTTCTCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS GCA 72 bp TTTCCCACACCAGGGAACAGTATAACTGGCTCAGCTTaGTCAAAACACTCAGACCCAATTGAGAGCCCCACT +
Preference number: 6 (lower is better)
Translates to: FPTPGNSITGSA*SKHSDPIESPT
Trigger: AGTGGGGCTCTCAATTGGGTCTGAGTGTTTTGAGCAAGCTGAGCCAGTTATACTGTTCCCTGGTGTGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TCCCGATCACTCTCACAGTTTGTTTCTTTGGTCCGCTaGTGTGTGAAGTGGCTGGGAAATACCTTGGCCAAT +
Preference number: 6 (lower is better)
Translates to: SRSLSQFVSLVR*CVKWLGNTLAN
Trigger: ATTGGCCAAGGTATTTCCCAGCCACTTCACACAGCAGCGGACCAAAGAAACAAACTGTGAGAGTGATCGGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp AGAACTTCTCCTCCTCCGCATGGCTGGGAGGTAATCTaGAGACAGAAGAACTTTGAAGAGGCGTTCAAAAGG +
Preference number: 6 (lower is better)
Translates to: RTSPPPHGWEVI*RQKNFEEAFKR
Trigger: CCTTTTGAACGCCTCTTCAAAGTTCTTCTGTCTCCAGATTACCTCCCAGCCATGCGGAGGAGGAGAAGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000489876.1
ENST00000612484.4
CDS CCA 72 bp GAATCACAGGTTCTCCTCGGAGGATGTGGCATAGAATaGCCAGCATCGATTCAGCCATTCGTCCACCATATA +
Preference number: 6 (lower is better)
Translates to: ESQVLLGGCGIE*PASIQPFVHHI
Trigger: TATATGGTGGACGAATGGCTGAATCGATGCTGGCCATTCTATGCCACATCCTCCGAGGAGAACCTGTGATTC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp TGTGTCTGGCAGCTCATCAAGAAGGTGGAAGCAGCCTaGCAACATAGTATCTGTGAAAGTGTGGAGCTCATC +
Preference number: 6 (lower is better)
Translates to: CVWQLIKKVEAA*QHSICESVELI
Trigger: GATGAGCTCCACACTTTCACAGATACTATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCTGCCAGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp GTGACCAGGGGAGTAAACCCATTGAAGCCTGAGCTCTaGGTCAAATTCAAGATCATGCGGGTACTCTTCAGT +
Preference number: 6 (lower is better)
Translates to: VTRGVNPLKPEL*VKFKIMRVLFS
Trigger: ACTGAAGAGTACCCGCATGATCTTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTTACTCCCCTGGTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CTAGAAGCACTCTTGCTGCCAAAAAGGCTACTGGGCTaGTTCACAATCCGGGAAAGTGTTTCCAAAGGCTTC +
Preference number: 6 (lower is better)
Translates to: LEALLLPKRLLG*FTIRESVSKGF
Trigger: GAAGCCTTTGGAAACACTTTCCCGGATTGTGAACCAGCCCAGTAGCCTTTTTGGCAGCAAGAGTGCTTCTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TTATTCAGCCGAGGTACCCTGCACCATTGTAGTGAATaGGACCGTGTATCTTCTTCGGCCTGCAGTGAATCG +
Preference number: 6 (lower is better)
Translates to: LFSRGTLHHCSE*DRVSSSACSES
Trigger: CGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATGGTGCAGGGTACCTCGGCTGAATAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000218328.12
CDS CAA 72 bp GCATCCTGCTCAGACTTGTTCTTGCTAGAAGCACTCTaGCTGCCAAAAAGGCTACTGGGCTGGTTCACAATC +
Preference number: 6 (lower is better)
Translates to: ASCSDLFLLEAL*LPKRLLGWFTI
Trigger: GATTGTGAACCAGCCCAGTAGCCTTTTTGGCAGCAAGAGTGCTTCTAGCAAGAACAAGTCTGAGCAGGATGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp GCACCGCTGCCAGAATTAGCCTGTGCTTCTGACACCTaGTTTTCTGGGAGAGCAATTGAGATGAGAGAAAGG +
Preference number: 6 (lower is better)
Translates to: APLPELACASDT*FSGRAIEMRER
Trigger: CCTTTCTCTCATCTCAATTGCTCTCCCAGAAAACAAGGTGTCAGAAGCACAGGCTAATTCTGGCAGCGGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp GACAGGCTAGAGGTTGGCCCTTCCACTTCTCATACATaGAGCTTGCAAAGAAGCTTCCCATATTTGGGTGGG +
Preference number: 6 (lower is better)
Translates to: DRLEVGPSTSHT*SLQRSFPYLGG
Trigger: CCCACCCAAATATGGGAAGCTTCTTTGCAAGCTCAATGTATGAGAAGTGGAAGGGCCAACCTCTAGCCTGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS CAA 90 bp CTGGTATACATCATCACCCATGTCTTGCAGGAGCTGGCCAACCTCTaGGGTCATAACCCCAGGTTTAGGATCAGATTTATCTGCTTCCTC +
Preference number: 6 (lower is better)
Translates to: LVYIITHVLQELANL*GHNPRFRIRFICFL
Trigger: GAGGAAGCAGATAAATCTGATCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGATGTATACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp CAGCTCTTGCTCGACTTTTTGCCCTTTTCCTCACTTGTAGTGAGTTaGGGTGTTTCAATGCATAGCTCACTCTCACTGCTGCGCTGCAAG +
Preference number: 6 (lower is better)
Translates to: QLLLDFLPFSSLVVS*GVSMHSSLSLLRCK
Trigger: CTTGCAGCGCAGCAGTGAGAGTGAGCTATGCATTGAAACACCCAAACTCACTACAAGTGAGGAAAAGGGCAAAAAGTCGAGCAAGAGCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp CTTGGAAGTACCTGTGACAAACTGGAGGAACTTGGCACGGTCAGCTaGATCGAAAGAACGCAATGCTCTCCAGAACCACTGGATCTGAAT +
Preference number: 6 (lower is better)
Translates to: LGSTCDKLEELGTVS*IERTQCSPEPLDLN
Trigger: ATTCAGATCCAGTGGTTCTGGAGAGCATTGCGTTCTTTCGATCAAGCTGACCGTGCCAAGTTCCTCCAGTTTGTCACAGGTACTTCCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS TCA 72 bp AACTGGCTCAGCTTGCTCAAAACACTCAGACCCAATTaGGAGCCCCACTGGTTTACGGAGATGGAACGAATT +
Preference number: 6 (lower is better)
Translates to: NWLSLLKTLRPN*EPHWFTEMERI
Trigger: AATTCGTTCCATCTCCGTAAACCAGTGGGGCTCTCAATTGGGTCTGAGTGTTTTGAGCAAGCTGAGCCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CATTGTGGCCTCCGGAGCAGAGAAATTTTTGCAGCATaGGGTGGTAGGGATACTTCCTCTCATCAAACAGCA +
Preference number: 6 (lower is better)
Translates to: HCGLRSREIFAA*GGRDTSSHQTA
Trigger: TGCTGTTTGATGAGAGGAAGTATCCCTACCACCTCATGCTGCAAAAATTTCTCTGCTCCGGAGGCCACAATG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp CTGGCACTGACTTCACGGAGTTCTTGCCTTTCCGGCTaGCATTCATGTTGTCCAGTTTTACCAATAAGTCCC +
Preference number: 6 (lower is better)
Translates to: LALTSRSSCLSG*HSCCPVLPISP
Trigger: GGGACTTATTGGTAAAACTGGACAACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 72 bp CATTGTAGTGAATTGGACCGTGTATCTTCTTCGGCCTaGAGTGAATCGCACGCTTGTCTCTCCAGATTTCCA +
Preference number: 6 (lower is better)
Translates to: HCSELDRVSSSA*SESHACLSRFP
Trigger: TGGAAATCTGGAGAGACAAGCGTGCGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp ATGGTGGGCAGTCCTGATATAAGCAGCTCTAACTCCTaGTCAGTGAAGATGGAAATGAGGCGCTTTGGAATG +
Preference number: 6 (lower is better)
Translates to: MVGSPDISSSNS*SVKMEMRRFGM
Trigger: CATTCCAAAGCGCCTCATTTCCATCTTCACTGAGCAGGAGTTAGAGCTGCTTATATCAGGACTGCCCACCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000488459.1
ENST00000612484.4
CDS CCA 72 bp TCCTGTCCCAGAGACATAGCAATTGCTCTCATCATCTaGTCCTCTTCAGACATGCTGAGATCCCGAACAACT +
Preference number: 6 (lower is better)
Translates to: SCPRDIAIALII*SSSDMLRSRTT
Trigger: AGTTGTTCGGGATCTCAGCATGTCTGAAGAGGACCAGATGATGAGAGCAATTGCTATGTCTCTGGGACAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp ACACGGTATACTGTGTCTGGCAGCTCATCAAGAAGGTaGAAGCAGCCTGGCAACATAGTATCTGTGAAAGTG +
Preference number: 6 (lower is better)
Translates to: TRYTVSGSSSRR*KQPGNIVSVKV
Trigger: CACTTTCACAGATACTATGTTGCCAGGCTGCTTCCACCTTCTTGATGAGCTGCCAGACACAGTATACCGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CCTGTTTCCTCATTAACCTGCACCATTGTAGTGAATTaGACCGTGTATCTTCTTCGGCCTGCAGTGAATCGC +
Preference number: 6 (lower is better)
Translates to: PVSSLTCTIVVN*TVYLLRPAVNR
Trigger: GCGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATGGTGCAGGTTAATGAGGAAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp AGGTCAGGCTGCTGGAGGACCTTCATACATGCTTTTTaGCCATATTGGGAGACAAACGATAAACATCCTGGC +
Preference number: 6 (lower is better)
Translates to: RSGCWRTFIHAF*PYWETNDKHPG
Trigger: GCCAGGATGTTTATCGTTTGTCTCCCAATATGGCCAAAAAGCATGTATGAAGGTCCTCCAGCAGCCTGACCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446750.1
CDS CCA 72 bp CCTTTTACCATGTGTGAGCTGAAGGCAGGCGATCTGTaGACCTGTCATCTCGATGGATCTGAAACTTCTGAA +
Preference number: 6 (lower is better)
Translates to: PFTMCELKAGDL*TCHLDGSETSE
Trigger: TTCAGAAGTTTCAGATCCATCGAGATGACAGGTCCACAGATCGCCTGCCTTCAGCTCACACATGGTAAAAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 72 bp CCCTGTTTCCTCATTAACCTGCACCATTGTAGTGAATaGGACCGTGTATCTTCTTCGGCCTGCAGTGAATCG +
Preference number: 6 (lower is better)
Translates to: PCFLINLHHCSE*DRVSSSACSES
Trigger: CGATTCACTGCAGGCCGAAGAAGATACACGGTCCAATTCACTACAATGGTGCAGGTTAATGAGGAAACAGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp ATCATCACCCATGTCTTGCAGGAGCTGGCCAACCTCTaGGGTCATAACCCCAGGTTTAGGATCAGATTTATC +
Preference number: 6 (lower is better)
Translates to: IITHVLQELANL*GHNPRFRIRFI
Trigger: GATAAATCTGATCCTAAACCTGGGGTTATGACCCAAGAGGTTGGCCAGCTCCTGCAAGACATGGGTGATGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TTAACCAGTCCCTTCTTCAGGAAAAGCCGAATGATGTaGTTCATGCCATTGTGCTGGGTCTTCGCTGTGGCA +
Preference number: 6 (lower is better)
Translates to: LTSPFFRKSRMM*FMPLCWVFAVA
Trigger: TGCCACAGCGAAGACCCAGCACAATGGCATGAACAACATCATTCGGCTTTTCCTGAAGAAGGGACTGGTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp TCAATGATGTGTCTTAAGAGAAGGGTGACCAGGGGAGTAAACCCATaGAAGCCTGAGCTCTGGGTCAAATTCAAGATCATGCGGGTACTC +
Preference number: 6 (lower is better)
Translates to: SMMCLKRRVTRGVNP*KPELWVKFKIMRVL
Trigger: GAGTACCCGCATGATCTTGAATTTGACCCAGAGCTCAGGCTTCAATGGGTTTACTCCCCTGGTCACCCTTCTCTTAAGACACATCATTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp GGCACTGACTTCACGGAGTTCTTGCCTTTCCGGCTGACATTCATGTaGTCCAGTTTTACCAATAAGTCCCAGAAGTCTGTGCAAATGCCA +
Preference number: 6 (lower is better)
Translates to: GTDFTEFLPFRLTFM*SSFTNKSQKSVQMP
Trigger: TGGCATTTGCACAGACTTCTGGGACTTATTGGTAAAACTGGACAACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAAGTCAGTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp GAGTTACCCAAGGTCCAGGACTCAGCCACATTTGTGTTCCCAATCTaGGGTAGGGTCCTGAAAACATCAAGTATGCAAGCTCAACCTAAG +
Preference number: 6 (lower is better)
Translates to: ELPKVQDSATFVFPI*GRVLKTSSMQAQPK
Trigger: CTTAGGTTGAGCTTGCATACTTGATGTTTTCAGGACCCTACCCAAGATTGGGAACACAAATGTGGCTGAGTCCTGGACCTTGGGTAACTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 90 bp TCCTTCTTATTCTCCTCTGTTACCAAGATGTTGGCCCCATTGGGTTaGAGGTCACGAACTTCACAAACTCCAAACTCTTGGACCTCAGTG +
Preference number: 6 (lower is better)
Translates to: SFLFSSVTKMLAPLG*RSRTSQTPNSWTSV
Trigger: CACTGAGGTCCAAGAGTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCTTGGTAACAGAGGAGAATAAGAAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp AGAGACAGGCTAGAGGTTGGCCCTTCCACTTCTCATACATTGAGCTaGCAAAGAAGCTTCCCATATTTGGGTGGGGAAAACTGTAGCTAT +
Preference number: 6 (lower is better)
Translates to: RDRLEVGPSTSHTLS*QRSFPYLGGENCSY
Trigger: ATAGCTACAGTTTTCCCCACCCAAATATGGGAAGCTTCTTTGCAAGCTCAATGTATGAGAAGTGGAAGGGCCAACCTCTAGCCTGTCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS CAA 90 bp TTCCTTAGAGACAGGCTAGAGGTTGGCCCTTCCACTTCTCATACATaGAGCTTGCAAAGAAGCTTCCCATATTTGGGTGGGGAAAACTGT +
Preference number: 6 (lower is better)
Translates to: FLRDRLEVGPSTSHT*SLQRSFPYLGGENC
Trigger: ACAGTTTTCCCCACCCAAATATGGGAAGCTTCTTTGCAAGCTCAATGTATGAGAAGTGGAAGGGCCAACCTCTAGCCTGTCTCTAAGGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS TCA 72 bp CCTCTCATCAAACAGCATTGGGGATGTGAAACCAACTaGACAGATGAAGAATGTCAGCCTGAATCGGGGAGT +
Preference number: 6 (lower is better)
Translates to: PLIKQHWGCETN*TDEECQPESGS
Trigger: ACTCCCCGATTCAGGCTGACATTCTTCATCTGTTCAGTTGGTTTCACATCCCCAATGCTGTTTGATGAGAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp ATGGAAAAACCTGACTGCGTATCAAAGTCACTGCTCTaGCGCGTAAGTGACCGGTACTGCTGGTATACATCA +
Preference number: 6 (lower is better)
Translates to: MEKPDCVSKSLL*RVSDRYCWYTS
Trigger: TGATGTATACCAGCAGTACCGGTCACTTACGCGTCAGAGCAGTGACTTTGATACGCAGTCAGGTTTTTCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TCTCCTCTGTTACCAAGATGTTGGCCCCATTGGGTTTaGGGTCACGAACTTCACAAACTCCAAACTCTTGGA +
Preference number: 6 (lower is better)
Translates to: SPLLPRCWPHWV*GHELHKLQTLG
Trigger: TCCAAGAGTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCTTGGTAACAGAGGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS GCA 72 bp TCACGGGTAGCAGGAACATCTTTGATAAGCAGTGCATaGAGCATGACATCTGTCAATCCATTGTCCTGGAGT +
Preference number: 6 (lower is better)
Translates to: SRVAGTSLISSA*SMTSVNPLSWS
Trigger: ACTCCAGGACAATGGATTGACAGATGTCATGCTGCATGCACTGCTTATCAAAGATGTTCCTGCTACCCGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000489876.1
ENST00000612484.4
CDS GCA 72 bp GGTCAAATTCAAGATCATGCGGGTACTCTTCAGTTCTaGAAACATCATGGCATATTTGTGGTCCCGGGTGAG +
Preference number: 6 (lower is better)
Translates to: GQIQDHAGTLQF*KHHGIFVVPGE
Trigger: CTCACCCGGGACCACAAATATGCCATGATGTTTGCAGAACTGAAGAGTACCCGCATGATCTTGAATTTGACC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp ATCATATACCACTCCCGCAGGAGCCCACCAGCATCCTaGCCTTCTTCTCCTTCAAATACTATATACAATCGA +
Preference number: 6 (lower is better)
Translates to: IIYHSRRSPPAS*PSSPSNTIYNR
Trigger: TCGATTGTATATAGTATTTGAAGGAGAAGAAGGGCAGGATGCTGGTGGGCTCCTGCGGGAGTGGTATATGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CCA 72 bp AAAAGAGAAGAGAGCAGTGGCAAACTGGTGAGGGTATaGATCCATGGAAGGATCAATCATGGCCTGGATACA +
Preference number: 6 (lower is better)
Translates to: KREESSGKLVRV*IHGRINHGLDT
Trigger: TGTATCCAGGCCATGATTGATCCTTCCATGGATCCATACCCTCACCAGTTTGCCACTGCTCTCTTCTCTTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TGTAGTACCCTCAAGAAGAACTTCTGGGTAGATGTCTaGGATGTCAACATGGACATAGAAGGCAGCTGGAGC +
Preference number: 6 (lower is better)
Translates to: CSTLKKNFWVDV*DVNMDIEGSWS
Trigger: GCTCCAGCTGCCTTCTATGTCCATGTTGACATCCAAGACATCTACCCAGAAGTTCTTCTTGAGGGTACTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp TTCTCCTCTGTTACCAAGATGTTGGCCCCATTGGGTTaGAGGTCACGAACTTCACAAACTCCAAACTCTTGG +
Preference number: 6 (lower is better)
Translates to: FSSVTKMLAPLG*RSRTSQTPNSW
Trigger: CCAAGAGTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCTTGGTAACAGAGGAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp AAGGTCCAGGACTCAGCCACATTTGTGTTCCCAATCTaGGGTAGGGTCCTGAAAACATCAAGTATGCAAGCT +
Preference number: 6 (lower is better)
Translates to: KVQDSATFVFPI*GRVLKTSSMQA
Trigger: AGCTTGCATACTTGATGTTTTCAGGACCCTACCCAAGATTGGGAACACAAATGTGGCTGAGTCCTGGACCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS CAA 90 bp TGCTGCAGTTCCAAGAGAAGTTGCTCATCATTACAAACTTTGAGTTaGTCTATTAAGGCTCTGCAGTCTGCAGGAGCCTCAGTAGGTGTC +
Preference number: 6 (lower is better)
Translates to: CCSSKRSCSSLQTLS*SIKALQSAGASVGV
Trigger: GACACCTACTGAGGCTCCTGCAGACTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTGCAGCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
ENST00000612484.4
CDS CAA 90 bp ACGTTCCTCTGTACCAACAACCTGCTGATTAGGCTCAGTTTCATTTaGCTGGGTAGAATTAAAGCTCTGCATGGCCTGTACTTCCTCTTC +
Preference number: 6 (lower is better)
Translates to: TFLCTNNLLIRLSFI*LGRIKALHGLYFLF
Trigger: GAAGAGGAAGTACAGGCCATGCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCTAATCAGCAGGTTGTTGGTACAGAGGAACGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp ACCAGGTGTACATACTCCTTCTTATTCTCCTCTGTTACCAAGATGTaGGCCCCATTGGGTTTGAGGTCACGAACTTCACAAACTCCAAAC +
Preference number: 6 (lower is better)
Translates to: TRCTYSFLFSSVTKM*APLGLRSRTSQTPN
Trigger: GTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCTTGGTAACAGAGGAGAATAAGAAGGAGTATGTACACCTGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS TCA 72 bp AGATGGATTGATGGTGTAGGTGACTCGATCACCAGGTaGGGTACGGAACAAGGCATACATAGGGTTAAACAT +
Preference number: 6 (lower is better)
Translates to: RWIDGVGDSITR*GTEQGIHRVKH
Trigger: ATGTTTAACCCTATGTATGCCTTGTTCCGTACCTCACCTGGTGATCGAGTCACCTACACCATCAATCCATCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474971.1
ENST00000612484.4
CDS TCA 72 bp CAGCCACATTTGTGTTCCCAATCTTGGGTAGGGTCCTaGAAACATCAAGTATGCAAGCTCAACCTAAGCACT +
Preference number: 6 (lower is better)
Translates to: QPHLCSQSWVGS*KHQVCKLNLST
Trigger: AGTGCTTAGGTTGAGCTTGCATACTTGATGTTTTCAGGACCCTACCCAAGATTGGGAACACAAATGTGGCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000488459.1
CDS GCA 72 bp ATCCATTGGAATATCCTGTCCCAGAGACATAGCAATTaGTCTCATCATCTGGTCCTCTTCAGACATGCTGAG +
Preference number: 6 (lower is better)
Translates to: IHWNILSQRHSN*SHHLVLFRHAE
Trigger: CTCAGCATGTCTGAAGAGGACCAGATGATGAGAGCAATTGCTATGTCTCTGGGACAGGATATTCCAATGGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GCCCTTACAATCGATTCTTCATTTCTTCGGGGGATTTaGGATGCAGCTCACGATAGGAGTCTTCAAACACAT +
Preference number: 6 (lower is better)
Translates to: ALTIDSSFLRGI*DAAHDRSLQTH
Trigger: ATGTGTTTGAAGACTCCTATCGTGAGCTGCATCGCAAATCCCCCGAAGAAATGAAGAATCGATTGTAAGGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000480438.1
CDS CCA 72 bp TCAACCACTCTGACGGCTCTGGTGACAAATGTTATCTaGTCCTGTTCATCGCCAAGAAACTTTATGACCTTC +
Preference number: 6 (lower is better)
Translates to: STTLTALVTNVI*SCSSPRNFMTF
Trigger: GAAGGTCATAAAGTTTCTTGGCGATGAACAGGACCAGATAACATTTGTCACCAGAGCCGTCAGAGTGGTTGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS CCA 72 bp TGCTGGAGGACCTTCATACATGCTTTTTGGCCATATTaGGAGACAAACGATAAACATCCTGGCAACTCAGGT +
Preference number: 6 (lower is better)
Translates to: CWRTFIHAFWPY*ETNDKHPGNSG
Trigger: ACCTGAGTTGCCAGGATGTTTATCGTTTGTCTCCCAATATGGCCAAAAAGCATGTATGAAGGTCCTCCAGCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446750.1
CDS CAA 72 bp CAGAGATTTCTCAGTACTCGGTGTAGACGGCTAGTATaGAGCTTTGGCTCATCCACAAAAAGTAGGACCAAG +
Preference number: 6 (lower is better)
Translates to: QRFLSTRCRRLV*SFGSSTKSRTK
Trigger: CTTGGTCCTACTTTTTGTGGATGAGCCAAAGCTCAATACTAGCCGTCTACACCGAGTACTGAGAAATCTCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp CTCGACTTTTTGCCCTTTTCCTCACTTGTAGTGAGTTaGGGTGTTTCAATGCATAGCTCACTCTCACTGCTG +
Preference number: 6 (lower is better)
Translates to: LDFLPFSSLVVS*GVSMHSSLSLL
Trigger: CAGCAGTGAGAGTGAGCTATGCATTGAAACACCCAAACTCACTACAAGTGAGGAAAAGGGCAAAAAGTCGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp TTCACGGAGTTCTTGCCTTTCCGGCTGACATTCATGTaGTCCAGTTTTACCAATAAGTCCCAGAAGTCTGTG +
Preference number: 6 (lower is better)
Translates to: FTEFLPFRLTFM*SSFTNKSQKSV
Trigger: CACAGACTTCTGGGACTTATTGGTAAAACTGGACAACATGAATGTCAGCCGGAAAGGCAAGAACTCCGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp GAAAGTTTCAAAAAGAGCATTGTGGCCTCCGGAGCAGAGAAATTTTaGCAGCATGAGGTGGTAGGGATACTTCCTCTCATCAAACAGCAT +
Preference number: 6 (lower is better)
Translates to: ESFKKSIVASGAEKF*QHEVVGILPLIKQH
Trigger: ATGCTGTTTGATGAGAGGAAGTATCCCTACCACCTCATGCTGCAAAAATTTCTCTGCTCCGGAGGCCACAATGCTCTTTTTGAAACTTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp ATCTGCAGCAAAGACCTGACTATTAATGGAAAAACCTaGCTGCGTATCAAAGTCACTGCTCTGACGCGTAAG +
Preference number: 6 (lower is better)
Translates to: ICSKDLTINGKT*LRIKVTALTRK
Trigger: CTTACGCGTCAGAGCAGTGACTTTGATACGCAGTCAGGTTTTTCCATTAATAGTCAGGTCTTTGCTGCAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp GTGAAGTTCAACACAGCCAAGAGAAGCATTTTCAGTTaGTCTCTTTCTGGCCTATCACATACGAGCATCCAT +
Preference number: 6 (lower is better)
Translates to: VKFNTAKRSIFS*SLSGLSHTSIH
Trigger: ATGGATGCTCGTATGTGATAGGCCAGAAAGAGAGCAACTGAAAATGCTTCTCTTGGCTGTGTTGAACTTCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TGGATATTTCATCATATGCAAGTCTCTGCAACATTCTaGAAGTCCAAAGCCATTCTCCTTTCCACCCCAGCT +
Preference number: 6 (lower is better)
Translates to: WIFHHMQVSATF*KSKAILLSTPA
Trigger: AGCTGGGGTGGAAAGGAGAATGGCTTTGGACTTGCAGAATGTTGCAGAGACTTGCATATGATGAAATATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp AGGATCAGATTTATCTGCTTCCTCTGGAGCATGGTATaGAGCCAGAGCATTCAGCATATCATAGATCACTTC +
Preference number: 6 (lower is better)
Translates to: RIRFICFLWSMV*SQSIQHIIDHF
Trigger: GAAGTGATCTATGATATGCTGAATGCTCTGGCTGCATACCATGCTCCAGAGGAAGCAGATAAATCTGATCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CCA 72 bp CTCTCCTTCTTGTGTAGTATTGGGTCTCTGGATCTTTaGCTTGATCACAAACGGACATTCTTTTCGGCACAA +
Preference number: 6 (lower is better)
Translates to: LSFLCSIGSLDL*LDHKRTFFSAQ
Trigger: TTGTGCCGAAAAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCCAATACTACACAAGAAGGAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS CAA 72 bp TGTACCAACAACCTGCTGATTAGGCTCAGTTTCATTTaGCTGGGTAGAATTAAAGCTCTGCATGGCCTGTAC +
Preference number: 6 (lower is better)
Translates to: CTNNLLIRLSFI*LGRIKALHGLY
Trigger: GTACAGGCCATGCAGAGCTTTAATTCTACCCAGCAAAATGAAACTGAGCCTAATCAGCAGGTTGTTGGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp TTCTTATTCTCCTCTGTTACCAAGATGTTGGCCCCATaGGGTTTGAGGTCACGAACTTCACAAACTCCAAAC +
Preference number: 6 (lower is better)
Translates to: FLFSSVTKMLAP*GLRSRTSQTPN
Trigger: GTTTGGAGTTTGTGAAGTTCGTGACCTCAAACCCAATGGGGCCAACATCTTGGTAACAGAGGAGAATAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 90 bp TTGATCTGCTGCAGTTCCAAGAGAAGTTGCTCATCATTACAAACTTaGAGTTTGTCTATTAAGGCTCTGCAGTCTGCAGGAGCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: LICCSSKRSCSSLQT*SLSIKALQSAGASV
Trigger: TACTGAGGCTCCTGCAGACTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTGCAGCAGATCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
ENST00000612484.4
CDS TCA 72 bp AGACCCAAAATGGTAACCAAAGGCAACAGTCCTTTCTaGTTCACAAATTCCTGGCAGTGGTCATCTGTTGTA +
Preference number: 6 (lower is better)
Translates to: RPKMVTKGNSPF*FTNSWQWSSVV
Trigger: TACAACAGATGACCACTGCCAGGAATTTGTGAATCAGAAAGGACTGTTGCCTTTGGTTACCATTTTGGGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp ATGCTTACATTTCCTACAGTCTACAATCCAGACCTGTaGCCAGTCAGAACTAGCCTCCTGTATATAGACTTC +
Preference number: 6 (lower is better)
Translates to: MLTFPTVYNPDL*PVRTSLLYIDF
Trigger: GAAGTCTATATACAGGAGGCTAGTTCTGACTGGTCACAGGTCTGGATTGTAGACTGTAGGAAATGTAAGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS GCA 72 bp AATAAAGTTGTCAAATGCTCTATGGAACTGTACAGATaGCGGGAAAAGCTGTACTCAATGAGCAAGGCTGTG +
Preference number: 6 (lower is better)
Translates to: NKVVKCSMELYR*REKLYSMSKAV
Trigger: CACAGCCTTGCTCATTGAGTACAGCTTTTCCCGGCATCTGTACAGTTCCATAGAGCATTTGACAACTTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp TTGCACTGGGTGGATATTTCATCATATGCAAGTCTCTaGAACATTCTGCAAGTCCAAAGCCATTCTCCTTTC +
Preference number: 6 (lower is better)
Translates to: LHWVDISSYASL*NILQVQSHSPF
Trigger: GAAAGGAGAATGGCTTTGGACTTGCAGAATGTTGCAGAGACTTGCATATGATGAAATATCCACCCAGTGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CTGTGTTTTGTAAGCTTTTCCCAACAGCTCCTTGGATaGTTACATTTCCTACAGTCTACAATCCAGACCTGT +
Preference number: 6 (lower is better)
Translates to: LCFVSFSQQLLG*LHFLQSTIQTC
Trigger: ACAGGTCTGGATTGTAGACTGTAGGAAATGTAAGCATCCAAGGAGCTGTTGGGAAAAGCTTACAAAACACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000463852.1
CDS CCA 72 bp TGGATGATGACCTGTAGTACCCTCAAGAAGAACTTCTaGGTAGATGTCTTGGATGTCAACATGGACATAGAA +
Preference number: 6 (lower is better)
Translates to: WMMTCSTLKKNF*VDVLDVNMDIE
Trigger: TTCTATGTCCATGTTGACATCCAAGACATCTACCCAGAAGTTCTTCTTGAGGGTACTACAGGTCATCATCCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474288.1
ENST00000612484.4
CDS CAA 72 bp CCTTCTTGTGTAGTATTGGGTCTCTGGATCTTTGGCTaGATCACAAACGGACATTCTTTTCGGCACAAATCT +
Preference number: 6 (lower is better)
Translates to: PSCVVLGLWIFG*ITNGHSFRHKS
Trigger: AGATTTGTGCCGAAAAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCCAATACTACACAAGAAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS CAA 90 bp ATTTCCTCTCCTTCTTGTGTAGTATTGGGTCTCTGGATCTTTGGCTaGATCACAAACGGACATTCTTTTCGGCACAAATCTACTTCATGC +
Preference number: 6 (lower is better)
Translates to: ISSPSCVVLGLWIFG*ITNGHSFRHKSTSC
Trigger: GCATGAAGTAGATTTGTGCCGAAAAGAATGTCCGTTTGTGATCAAGCCAAAGATCCAGAGACCCAATACTACACAAGAAGGAGAGGAAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS GCA 72 bp AATGAAGATAGAAAGTCCACTATGGGATTGAAAAGCTaGCATATCCAGGTTGGTGATAAGGTCAACCACTCT +
Preference number: 6 (lower is better)
Translates to: NEDRKSTMGLKS*HIQVGDKVNHS
Trigger: AGAGTGGTTGACCTTATCACCAACCTGGATATGGCAGCTTTTCAATCCCATAGTGGACTTTCTATCTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
ENST00000622887.1
CDS GCA 72 bp CCTAATCTGGAGGAAGCTGATAACAAAGGCTTGATTTaGTTAATTCTGGCAGCCATTGCTGGTGTGATTTTA +
Preference number: 6 (lower is better)
Translates to: PNLEEADNKGLI*LILAAIAGVIL
Trigger: TAAAATCACACCAGCAATGGCTGCCAGAATTAAGCAAATCAAGCCTTTGTTATCAGCTTCCTCCAGATTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp AATCATGTCACGATAATCTGCTCCATTACGTTTGATTaGTGTCATGATCAGGTCACACACACGGTATACTGT +
Preference number: 6 (lower is better)
Translates to: NHVTIICSITFD*CHDQVTHTVYC
Trigger: ACAGTATACCGTGTGTGTGACCTGATCATGACAGCAATCAAACGTAATGGAGCAGATTATCGTGACATGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS GCA 72 bp CTATATACAATCGATTCTTCATTTCTTCGGGGGATTTaGGATGCAGCTCACGATAGGAGTCTTCAAACACAT +
Preference number: 6 (lower is better)
Translates to: LYTIDSSFLRGI*DAAHDRSLQTH
Trigger: ATGTGTTTGAAGACTCCTATCGTGAGCTGCATCGCAAATCCCCCGAAGAAATGAAGAATCGATTGTATATAG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000612484.4
CDS CAA 72 bp TGCAGTTCCAAGAGAAGTTGCTCATCATTACAAACTTaGAGTTTGTCTATTAAGGCTCTGCAGTCTGCAGGA +
Preference number: 6 (lower is better)
Translates to: CSSKRSCSSLQT*SLSIKALQSAG
Trigger: TCCTGCAGACTGCAGAGCCTTAATAGACAAACTCAAAGTTTGTAATGATGAGCAACTTCTCTTGGAACTGCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000446750.1
ENST00000612484.4
CDS CAA 72 bp TGTGGAGACATCATTTTCCAGCAGATAAACCAGACCTaGGTAGAAGTGGTAATCTTCACTCTCCATATCTGT +
Preference number: 6 (lower is better)
Translates to: CGDIIFQQINQT*VEVVIFTLHIC
Trigger: ACAGATATGGAGAGTGAAGATTACCACTTCTACCAAGGTCTGGTTTATCTGCTGGAAAATGATGTCTCCACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000262854.11
ENST00000342160.7
ENST00000426907.5
ENST00000474971.1
ENST00000612484.4
CDS GCA 72 bp ATTGACTACTTGCTTCAGAATCATGTCACGATAATCTaGTCCATTACGTTTGATTGCTGTCATGATCAGGTC +
Preference number: 6 (lower is better)
Translates to: IDYLLQNHVTII*SITFDCCHDQV
Trigger: GACCTGATCATGACAGCAATCAAACGTAATGGAGCAGATTATCGTGACATGATTCTGAAGCAAGTAGTCAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS TCA 72 bp TGGGAGACAAACGATAAACATCCTGGCAACTCAGGTTaGACTTTGCCATTGAACCTTAGACAAAGTTTTTAT +
Preference number: 6 (lower is better)
Translates to: WETNDKHPGNSG*TLPLNLRQSFY
Trigger: ATAAAAACTTTGTCTAAGGTTCAATGGCAAAGTTCAACCTGAGTTGCCAGGATGTTTATCGTTTGTCTCCCA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000446750.1
CDS CCA 72 bp TCAATAATACTGCTGAGTTTGGGAGTTCTCTCCAAGTaGACAATTGATGTTAATGTTCGTAAAGAAGCTGCT +
Preference number: 6 (lower is better)
Translates to: SIILLSLGVLSK*TIDVNVRKEAA
Trigger: AGCAGCTTCTTTACGAACATTAACATCAATTGTCCACTTGGAGAGAACTCCCAAACTCAGCAGTATTATTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 72 bp AACAGCATCTGCTTATCCTTAGGAATGCTGTACATTTaGGTAAGAGATTCCATGATTTCAGAAGGGCTTTCT +
Preference number: 6 (lower is better)
Translates to: NSICLSLGMLYI*VRDSMISEGLS
Trigger: AGAAAGCCCTTCTGAAATCATGGAATCTCTTACCAAAATGTACAGCATTCCTAAGGATAAGCAGATGCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000471676.1
ENST00000612484.4
CDS CAA 72 bp CCAACTCCTCTATCAAGCCATTATACAAGATACTGTTaGCTGATTCCTGCAAGGCATTGGAATACACTAATA +
Preference number: 6 (lower is better)
Translates to: PTPLSSHYTRYC*LIPARHWNTLI
Trigger: TATTAGTGTATTCCAATGCCTTGCAGGAATCAGCAAACAGTATCTTGTATAATGGCTTGATAGAGGAGTTGG
39% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp TGTGTAAATAACAGCATCTGCTTATCCTTAGGAATGCTGTACATTTaGGTAAGAGATTCCATGATTTCAGAAGGGCTTTCTGAAATCTTG +
Preference number: 6 (lower is better)
Translates to: CVNNSICLSLGMLYI*VRDSMISEGLSEIL
Trigger: CAAGATTTCAGAAAGCCCTTCTGAAATCATGGAATCTCTTACCAAAATGTACAGCATTCCTAAGGATAAGCAGATGCTGTTATTTACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4
CDS CAA 90 bp TGTGTAAATAACAGCATCTGCTTATCCTTAGGAATGCTGTACATTTaGGTAAGAGATTCCATGATTTCAGAAGGGCTTTCTGAAATCTAC +
Preference number: 6 (lower is better)
Translates to: CVNNSICLSLGMLYI*VRDSMISEGLSEIY
Trigger: GTAGATTTCAGAAAGCCCTTCTGAAATCATGGAATCTCTTACCAAAATGTACAGCATTCCTAAGGATAAGCAGATGCTGTTATTTACACA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000471676.1
CDS CAA 72 bp TTCACAAATTCCTGGCAGTGGTCATCTGTTGTATTGTaGCTCAGAATAGATTCCACAAATTTCATCACATTA +
Preference number: 6 (lower is better)
Translates to: FTNSWQWSSVVL*LRIDSTNFITL
Trigger: TAATGTGATGAAATTTGTGGAATCTATTCTGAGCAACAATACAACAGATGACCACTGCCAGGAATTTGTGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000218328.12
ENST00000262854.11
ENST00000342160.7
ENST00000612484.4