RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HUS1 (Homo sapiens)

Ensembl gene IDs: ENSG00000136273

Ensembl transcript IDs: ENST00000258774.10, ENST00000432325.5, ENST00000432627.5, ENST00000433977.5, ENST00000442024.5, ENST00000446009.1, ENST00000458191.5, ENST00000468868.1

Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TCCAAGGGGCAGGAGCAGCGGGGTGAACACACTGAAATGCAAGACTaGCTGTGCGCTACAGGCCGTGCTGAGCTAGAGCCTCTGCCTGGA +
Preference number: 1 (lower is better)
Translates to: SKGQEQRGEHTEMQD*LCATGRAELEPLPG
Trigger: TCCAGGCAGAGGCTCTAGCTCAGCACGGCCTGTAGCGCACAGTCAGTCTTGCATTTCAGTGTGTTCACCCCGCTGCTCCTGCCCCTTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
3UTR TCA 90 bp GGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTaGGTCCTCAGCAAGAGAGAGACTCCAAATGCTGCAGCTGTGACA +
Preference number: 1 (lower is better)
Translates to: GQLSRHQEGSGLRWA*VLSKRETPNAAAVT
Trigger: TGTCACAGCTGCAGCATTTGGAGTCTCTCTCTTGCTGAGGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
3UTR TCA 90 bp GTTAGAGAGGGACAAATAAGTACAGTGTGTCGATGTGCGGTGCTGTaGGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTC +
Preference number: 1 (lower is better)
Translates to: VREGQISTVCRCAVL*GHRPVIRTQHLRPL
Trigger: GAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGCACCGCACATCGACACACTGTACTTATTTGTCCCTCTCTAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
3UTR GCA 90 bp TCTGTCAGCTACTTGGTGGCACAGCTTCTCCCCCTGGTGGCTAACTaGCCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCCTT +
Preference number: 1 (lower is better)
Translates to: SVSYLVAQLLPLVAN*PTTPQGYIVQSQFL
Trigger: AAGGAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR TCA 90 bp AATACTAACCCAGCATATTTCTGTACTTTCTTCTTAAACAAATTGTaGGCAAGAGGAAATGGGCCCTTTGGCATCATCTTTACTTTCAGG +
Preference number: 1 (lower is better)
Translates to: NTNPAYFCTFFLNKL*ARGNGPFGIIFTFR
Trigger: CCTGAAAGTAAAGATGATGCCAAAGGGCCCATTTCCTCTTGCTCACAATTTGTTTAAGAAGAAAGTACAGAAATATGCTGGGTTAGTATT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
3UTR-3UTR GCA 90 bp GGACTGAGGATGGCTGAGCCAAACTCCACACGCCCAGGCTACCAGACTTCTGCCTACTCCTGCTCTTGCTaGCCGGGGACTGTCTCCACA +
Preference number: 2 (lower is better)
Translates to: GLRMAEPNSTRPGYQTSAYSCSC*PGTVST
Trigger: TGTGGAGACAGTCCCCGGGCAGCAAGAGCAGGAGTA...GGCAGAAGTCTGGTAGCCTGGGCGTGTGGAGTTTGGCTCAGCCATCCTCAGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR-3UTR GCA 90 bp TGGGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTGAGTCCTACAGTGTGTCGATGTaGGGTGCTGTGAGGGCACAG +
Preference number: 2 (lower is better)
Translates to: WASSLGIKRGVDSGGLESYSVSM*GAVRAQ
Trigger: CTGTGCCCTCACAGCACCGCACATCGACACACTGTA...GGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
3UTR-3UTR TCA 90 bp TGGGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTGAGTCCACTGAAATGCAAGACTaGCTGTGCGCTACAGGCCGT +
Preference number: 2 (lower is better)
Translates to: WASSLGIKRGVDSGGLESTEMQD*LCATGR
Trigger: ACGGCCTGTAGCGCACAGTCAGTCTTGCATTTCAGT...GGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
3UTR-3UTR CCA 90 bp TGGCACAGCTTCTCCCCCTGGTGGCTAACTGCCCCACTACACCACAGGGATACAAAATCCAGAAGGGTCTaGGGCTGCTGTTGGGTTACC +
Preference number: 2 (lower is better)
Translates to: WHSFSPWWLTAPLHHRDTKSRRV*GCCWVT
Trigger: GGTAACCCAACAGCAGCCCCAGACCCTTCTGGATTT...TGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR-3UTR GCA 90 bp CCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCCTTTGTTCTTCACCCTTCTACTCCTGCTCTTaGTGCCCGGGGACTGTCTCC +
Preference number: 2 (lower is better)
Translates to: PTTPQGYIVQSQFLCSSPFYSCS*CPGTVS
Trigger: GGAGACAGTCCCCGGGCAGCAAGAGCAGGAGTAGAA...GGGTGAAGAACAAAGGAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR-3UTR CCA 90 bp TGGAGGTTATGTAACTTGATCCGAATTCTACAGAGGATGGAGACCCTGCACAGACACAGCTTCTCCCCCTaGTGGCTAACTGCCCCACTA +
Preference number: 2 (lower is better)
Translates to: WRLCNLIRILQRMETLHRHSFSP*WLTAPL
Trigger: TAGTGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTG...TCTGTGCAGGGTCTCCATCCTCTGTAGAATTCGGATCAAGTTACATAACCTCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR-3UTR GCA 90 bp CTGGTGGCTAACTGCCCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCAGGCTACCAGACTTCTaGCATCCCCTCATATACCAT +
Preference number: 2 (lower is better)
Translates to: LVANCPTTPQGYIVQSQFRLPDF*HPLIYH
Trigger: ATGGTATATGAGGGGATGGCAGAAGTCTGGTAGCCT...GAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR-3UTR GCA 90 bp TCTTGGAGGTTATGTAACTTGATCCGAATTCTACAGAGGATGGAGACCCTGCACAGAAGGGTCTGGGGCTaGTGTTGGGTTACCAGGACT +
Preference number: 2 (lower is better)
Translates to: SWRLCNLIRILQRMETLHRRVWG*CWVTRT
Trigger: AGTCCTGGTAACCCAACAGCAGCCCCAGACCCTTCT...GTGCAGGGTCTCCATCCTCTGTAGAATTCGGATCAAGTTACATAACCTCCAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR GCA 72 bp CCAAGGGGCAGGAGCAGCGGGGTGAACACACTGAAATaGAAGACTGACTGTGCGCTACAGGCCGTGCTGAGC +
Preference number: 3 (lower is better)
Translates to: PRGRSSGVNTLK*KTDCALQAVLS
Trigger: GCTCAGCACGGCCTGTAGCGCACAGTCAGTCTTGCATTTCAGTGTGTTCACCCCGCTGCTCCTGCCCCTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
3UTR GCA 72 bp TACCATCGGGCACCCCTCTTCTACTCCTGCTCTTGCTaGCCGGGGACTGTCTCCACAGGTCACAAGGGACTC +
Preference number: 3 (lower is better)
Translates to: YHRAPLFYSCSC*PGTVSTGHKGL
Trigger: GAGTCCCTTGTGACCTGTGGAGACAGTCCCCGGGCAGCAAGAGCAGGAGTAGAAGAGGGGTGCCCGATGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR CCA 72 bp GGATGGAGACCCTGCACAGATCTGTCAGCTACTTGGTaGCACAGCTTCTCCCCCTGGTGGCTAACTGCCCCA +
Preference number: 3 (lower is better)
Translates to: GWRPCTDLSATW*HSFSPWWLTAP
Trigger: TGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCTGTGCAGGGTCTCCATCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR TCA 72 bp CAGGAGCAGCGGGGTGAACACACTGAAATGCAAGACTaGCTGTGCGCTACAGGCCGTGCTGAGCTAGAGCCT +
Preference number: 3 (lower is better)
Translates to: QEQRGEHTEMQD*LCATGRAELEP
Trigger: AGGCTCTAGCTCAGCACGGCCTGTAGCGCACAGTCAGTCTTGCATTTCAGTGTGTTCACCCCGCTGCTCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
3UTR CCA 72 bp AGAGGATGGAGACCCTGCACAGATCTGTCAGCTACTTaGTGGCACAGCTTCTCCCCCTGGTGGCTAACTGCC +
Preference number: 3 (lower is better)
Translates to: RGWRPCTDLSAT*WHSFSPWWLTA
Trigger: GGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCTGTGCAGGGTCTCCATCCTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR TCA 72 bp GTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTaGCAAAGTCTCTGCATGCCAACTCCAGCGACAGGG +
Preference number: 3 (lower is better)
Translates to: VIRTQHLRPLPS*QSLCMPTPATG
Trigger: CCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
3UTR TCA 72 bp AACGACAGATCCGATACACTGCGGCCTCTCCCATCCTaGCAAAGTCTCTGCATGCCAACTCCAGCGACAGGG +
Preference number: 3 (lower is better)
Translates to: NDRSDTLRPLPS*QSLCMPTPATG
Trigger: CCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
3UTR CCA 72 bp GATCTGTCAGCTACTTGGTGGCACAGCTTCTCCCCCTaGTGGCTAACTGCCCCACTACACCACAGGGATACA +
Preference number: 3 (lower is better)
Translates to: DLSATWWHSFSP*WLTAPLHHRDT
Trigger: TGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR-3UTR CAA 90 bp CCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCCTTTGTTCTTCACCCCTTCTACTCCTGCTCTaGCTGCCCGGGGACTGTCTC +
Preference number: 3 (lower is better)
Translates to: PTTPQGYIVQSQFLCSSPLLLLL*LPGDCL
Trigger: GAGACAGTCCCCGGGCAGCAAGAGCAGGAGTAGAAG...GGGTGAAGAACAAAGGAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
3UTR TCA 72 bp GGACAAATAAGTACAGTGTGTCGATGTGCGGTGCTGTaGGGGCACAGACCAGTGATCAGAACACAACACCTG +
Preference number: 3 (lower is better)
Translates to: GQISTVCRCAVL*GHRPVIRTQHL
Trigger: CAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGCACCGCACATCGACACACTGTACTTATTTGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
3UTR CCA 72 bp ATGTTGGAAAATGAAATGTCCAAATCCAGAAGGGTCTaGGGCTGCTGTTGGGTTACCAGGACTGAGGATGGC +
Preference number: 3 (lower is better)
Translates to: MLENEMSKSRRV*GCCWVTRTEDG
Trigger: GCCATCCTCAGTCCTGGTAACCCAACAGCAGCCCCAGACCCTTCTGGATTTGGACATTTCATTTTCCAACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTTCATGGCCGCGGATaGCGCAGCCGCGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: AVRAQTSDQNTTPAASPILHGRG*RSRGGP
Trigger: AGGCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAG...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp CCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGCGCGGCGGGCCTCTGTaGGTAACAGAAAAGCGTCGC +
Preference number: 4 (lower is better)
Translates to: PAASPILTKSLHANSSDRRGGPL*VTEKRR
Trigger: GCGACGCTTTTCTGTTACCCACAGAGGCCCGCCGCG...CCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTTGGCCCGAAACTTCATaGCCGCGGATGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGWPETS*PRMAQP
Trigger: CGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCA...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS-3UTR GCA 90 bp CCACACGCCCAGGCTACCAGACTTCTGCCATCCCCTCATATACCATCGGGCACCCCCCTGGTGGCTAACTaGCCCACTACACCACAGGGA +
Preference number: 4 (lower is better)
Translates to: PHAQATRLLPSPHIPSGTPLVAN*PTTPQG
Trigger: TCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAGGGG...GGTGCCCGATGGTATATGAGGGGATGGCAGAAGTCTGGTAGCCTGGGCGTGTGG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp TGGGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTGAGTCCCCCCGTCCACGATCTTaGCCCGAAACTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: WASSLGIKRGVDSGGLESPRPRS*PETSWP
Trigger: CGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGG...GGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCCCA
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp CCTGCTCTTGCTGCCCGGGGACTGTCTCCACAGGTCACAAGGGACTCCTTTCCTTTCTACTCCTGCTCTTaGTGCCCGGGGACTGTCTCC +
Preference number: 4 (lower is better)
Translates to: PALAARGLSPQVTRDSFPFYSCS*CPGTVS
Trigger: GGAGACAGTCCCCGGGCAGCAAGAGCAGGAGTAGAA...AGGAAAGGAGTCCCTTGTGACCTGTGGAGACAGTCCCCGGGCAGCAAGAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCTGGCCCGAAACTTCATaGCCGCGGATGGCGCAGCCG +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLWPETS*PRMAQP
Trigger: CGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCA...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTCCCCGTCCACGATCTTaGCCCGAAACTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGPRPRS*PETSWP
Trigger: CGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGG...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
3UTR CAA 72 bp CATATACCATCGGGCACCCCTCTTCTACTCCTGCTCTaGCTGCCCGGGGACTGTCTCCACAGGTCACAAGGG +
Preference number: 4 (lower is better)
Translates to: HIPSGTPLLLLL*LPGDCLHRSQG
Trigger: CCCTTGTGACCTGTGGAGACAGTCCCCGGGCAGCAAGAGCAGGAGTAGAAGAGGGGTGCCCGATGGTATATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp TGGGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTGAGTCCGCTCCACGGAGACCGTaGGGCAGGGAAAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: WASSLGIKRGVDSGGLESAPRRP*GRESVY
Trigger: ATAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGC...GGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCGGACTCAGGTGGGCTTaGGTCCTCAGCAAGAGAGAG +
Preference number: 4 (lower is better)
Translates to: AVRAQTSDQNTTPAASPIGLRWA*VLSKRE
Trigger: CTCTCTCTTGCTGAGGACTCAAGCCCACCTGAGTCC...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp AACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACTCCCTGCTCACGTGTaGAGTGGTTCAGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: NTCGLSHPDKVSACQLQRLPAHV*SGSDRP
Trigger: GGGCCTGTCTGAACCACTTCACACGTGAGCAGGGAG...TCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432325.5
CDS-3UTR GCA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCTGTGTCGATGTGCGGTaGTGTGAGGGCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: AVRAQTSDQNTTPAASPICVDVR*CEGTDQ
Trigger: CTGGTCTGTGCCCTCACAGCACCGCACATCGACACA...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp CCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGTACAGTGTGTCGATGTaGGGTGCTGTGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: PAASPILTKSLHANSSDRYSVSM*GAVRAQ
Trigger: CTGTGCCCTCACAGCACCGCACATCGACACACTGTA...CCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp CCTGCTCTTGCTGCCCGGGGACTGTCTCCACAGGTCACAAGGGACTCCTTTCCTAGAAGGGTCTGGGGCTaGTGTTGGGTTACCAGGACT +
Preference number: 4 (lower is better)
Translates to: PALAARGLSPQVTRDSFPRRVWG*CWVTRT
Trigger: AGTCCTGGTAACCCAACAGCAGCCCCAGACCCTTCT...AGGAAAGGAGTCCCTTGTGACCTGTGGAGACAGTCCCCGGGCAGCAAGAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp TGGGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTGAGTCCGCTAGAGCCTCTGCCTaGAGGGAAAGTACCAAGCTC +
Preference number: 4 (lower is better)
Translates to: WASSLGIKRGVDSGGLESARASA*RESTKL
Trigger: GAGCTTGGTACTTTCCCTCCAGGCAGAGGCTCTAGC...GGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTGCTCCACGGAGACCGTaGGGCAGGGAAAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGAPRRP*GRESVY
Trigger: ATAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGC...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS-3UTR TCA 90 bp AGATCTGTCAGCTACTTGGTGGCACAGCTTCTCCCCCTGGTGGCTAACTGCCCCGCTCCACGGAGACCGTaGGGCAGGGAAAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: RSVSYLVAQLLPLVANCPAPRRP*GRESVY
Trigger: ATAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGC...GGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGGTGGGCGGGTGGCTTaGGCCCAGGAGTTCAAGACC +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHGGRVA*AQEFKT
Trigger: GGTCTTGAACTCCTGGGCTCAAGCCACCCGCCCACC...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCTCAGAACACAACACCTaGGGCCTCTCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: AVRAQTSDQNTTPAASPISEHNT*GLSHPD
Trigger: GTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGA...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCCTCTCCGGCCTCCCTaGTCACGTGTGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLPLRPP*SRVKWF
Trigger: GAACCACTTCACACGTGAGCAGGGAGGCCGGAGAGG...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432325.5
3UTR CAA 72 bp CAGAGGATGGAGACCCTGCACAGATCTGTCAGCTACTaGGTGGCACAGCTTCTCCCCCTGGTGGCTAACTGC +
Preference number: 4 (lower is better)
Translates to: QRMETLHRSVSY*VAQLLPLVANC
Trigger: GCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCTGTGCAGGGTCTCCATCCTCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR GCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTGACAAAGTCTCTGCATaGCAACTCCAGCGACAGGGT +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGDKVSA*QLQRQG
Trigger: ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTC...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS-3UTR GCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCTGTGTCGATGTGCGGTaGTGTGAGGGCACAGACCAG +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLCVDVR*CEGTDQ
Trigger: CTGGTCTGTGCCCTCACAGCACCGCACATCGACACA...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCATTCCGCGCGCTCACTaGTTCCTTCCGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLIPRAH*FLPFLP
Trigger: AGGGAGGAACGGAAGGAAGCAGTGAGCGCGCGGAAT...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000432325.5
CDS-3UTR CCA 90 bp GAACGACAGATCCGATACACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATCCCCGTCCACGATCTTaGCCCGAAACTTCATGGCCG +
Preference number: 4 (lower is better)
Translates to: ERQIRYTAASPILTKSLHPRPRS*PETSWP
Trigger: CGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGG...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CCA 90 bp GGTCTTCTTTCCAGAACGACAGATCCGATACACTGCGGCCTCTCCCATCCTGACTGCTCACGTGTGAAGTaGTTCAGACAGGCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GLLSRTTDPIHCGLSHPDCSRVK*FRQAPS
Trigger: GGACGGGGCCTGTCTGAACCACTTCACACGTGAGCA...GTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTTCTGGAAAGAAGACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR TCA 90 bp TTCTTTCTGTCACTGGGCTCCAAGGGGCAGGAGCAGCGGGGTGAACACACTGAAAGGACAGCGCAGGGATaGAATACTGAAGGGACACGT +
Preference number: 4 (lower is better)
Translates to: FFLSLGSKGQEQRGEHTERTAQG*NTEGTR
Trigger: ACGTGTCCCTTCAGTATTTCATCCCTGCGCTGTCCT...TTCAGTGTGTTCACCCCGCTGCTCCTGCCCCTTGGAGCCCAGTGACAGAAAGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATCGATGTGCGGTGCTGTaGGGGCACAGACCAGTGATC +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHRCAVL*GHRPVI
Trigger: GATCACTGGTCTGTGCCCTCACAGCACCGCACATCG...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR TCA 90 bp AACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGAACTGAAATGCAAGACTaGCTGTGCGCTACAGGCCGT +
Preference number: 4 (lower is better)
Translates to: NTCGLSHPDKVSACQLQRTEMQD*LCATGR
Trigger: ACGGCCTGTAGCGCACAGTCAGTCTTGCATTTCAGT...TCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp CTGGTGGCTAACTGCCCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCAGGACTGAGGATGGCTaGGCCAAACTCCACACGCCC +
Preference number: 4 (lower is better)
Translates to: LVANCPTTPQGYIVQSQFRTEDG*AKLHTP
Trigger: GGGCGTGTGGAGTTTGGCTCAGCCATCCTCAGTCCT...GAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR GCA 90 bp TGGGCCAGCTCTCTAGGCATCAAGAGGGGAGTGGACTCAGGTGGGCTTGAGTCCTTCTGTCCTCATGGGTaGTTTCAGAGGCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: WASSLGIKRGVDSGGLESFCPHG*FQRLME
Trigger: CTCCATTAGCCTCTGAAAGCACCCATGAGGACAGAA...GGACTCAAGCCCACCTGAGTCCACTCCCCTCTTGATGCCTAGAGAGCTGGCCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp CCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGTTCTGTCCTCATGGGTaGTTTCAGAGGCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: PAASPILTKSLHANSSDRFCPHG*FQRLME
Trigger: CTCCATTAGCCTCTGAAAGCACCCATGAGGACAGAA...CCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp GAACGACAGATCCGATACACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATATTCCGCGCGCTCACTaGTTCCTTCCGTTCCTCCCT +
Preference number: 4 (lower is better)
Translates to: ERQIRYTAASPILTKSLHIPRAH*FLPFLP
Trigger: AGGGAGGAACGGAAGGAAGCAGTGAGCGCGCGGAAT...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR GCA 90 bp TACCAGACTTCTGCCATCCCCTCATATACCATCGGGCACCCCTCTTCTACTCCTTACTCCTGCTCTTGCTaGCCGGGGACTGTCTCCACA +
Preference number: 4 (lower is better)
Translates to: YQTSAIPSYTIGHPSSTPYSCSC*PGTVST
Trigger: TGTGGAGACAGTCCCCGGGCAGCAAGAGCAGGAGTA...AGGAGTAGAAGAGGGGTGCCCGATGGTATATGAGGGGATGGCAGAAGTCTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR GCA 90 bp CTGGTGGCTAACTGCCCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCCCCCTCTTCTACTCCTaGTCTTGCTGCCCGGGGACT +
Preference number: 4 (lower is better)
Translates to: LVANCPTTPQGYIVQSQFPLFYS*SCCPGT
Trigger: AGTCCCCGGGCAGCAAGAGCAGGAGTAGAAGAGGGG...GAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTGGAGGGTGCAGGTTTTaGCAAGCTTGGCTATCATGT +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGGGCRF*QAWLSC
Trigger: ACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCC...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS-3UTR CCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCAAGAGCTGTGTTGGCTaGGCCAGCTCTCTAGGCATC +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLKSCVG*ASSLGI
Trigger: GATGCCTAGAGAGCTGGCCCAGCCAACACAGCTCTT...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCGTCAGGAAGCTGAGGTaGGAGGATGCCTTGAGCCAA +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLVRKLR*EDALSQ
Trigger: TTGGCTCAAGGCATCCTCCCACCTCAGCTTCCTGAC...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp GAACGACAGATCCGATACACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCTCCACGGAGACCGTaGGGCAGGGAAAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: ERQIRYTAASPILTKSLHAPRRP*GRESVY
Trigger: ATAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGC...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR TCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTGTCTGGGTGACAGAATaGGACCGTCTCAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGVWVTE*DRLKQN
Trigger: GTTTTGTTTGAGACGGTCTCATTCTGTCACCCAGAC...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCGACAAAGTCTCTGCATaGCAACTCCAGCGACAGGGT +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLDKVSA*QLQRQG
Trigger: ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTC...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTCTTCATGGCCGCGGATaGCGCAGCCGCGGCGGGCCT +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTLHGRG*RSRGGP
Trigger: AGGCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAG...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR CCA 90 bp GATCCGATACACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DPIHCGLSHPDKVSACQLKALAF*AVFKAR
Trigger: TCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTT...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATTGCTCACGTGTGAAGTaGTTCAGACAGGCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHCSRVK*FRQAPS
Trigger: GGACGGGGCCTGTCTGAACCACTTCACACGTGAGCA...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000432325.5
CDS-3UTR TCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTATGTTTCAGGGAGAATaGGCACATCTACCAGTACTG +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGMFQGE*AHLPVL
Trigger: CAGTACTGGTAGATGTGCTCATTCTCCCTGAAACAT...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR TCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATCAATGCGGTGAGCCATaGTTGTGGCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHQCGEP*LWHCTP
Trigger: TGGAGTGCAGTGCCACAATCATGGCTCACCGCATTG...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp CCTGCTCTTGCTGCCCGGGGACTGTCTCCACAGGTCACAAGGGACTCCTTTCCTGGAGGTTATGTAACTTaGTCCGAATTCTACAGAGGA +
Preference number: 4 (lower is better)
Translates to: PALAARGLSPQVTRDSFPGGYVT*SEFYRG
Trigger: TCCTCTGTAGAATTCGGATCAAGTTACATAACCTCC...AGGAAAGGAGTCCCTTGTGACCTGTGGAGACAGTCCCCGGGCAGCAAGAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp TACCAGACTTCTGCCATCCCCTCATATACCATCGGGCACCCCTCTTCTACTCCTAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: YQTSAIPSYTIGHPSSTPKALAF*AVFKAR
Trigger: TCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTT...AGGAGTAGAAGAGGGGTGCCCGATGGTATATGAGGGGATGGCAGAAGTCTGGTA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp TTCTTTCTGTCACTGGGCTCCAAGGGGCAGGAGCAGCGGGGTGAACACACTGAACAGGAAGAAACTAGTTaGAATGGCAGAAGGAGCTCC +
Preference number: 4 (lower is better)
Translates to: FFLSLGSKGQEQRGEHTEQEETS*NGRRSS
Trigger: GGAGCTCCTTCTGCCATTCCAACTAGTTTCTTCCTG...TTCAGTGTGTTCACCCCGCTGCTCCTGCCCCTTGGAGCCCAGTGACAGAAAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCGAGACACCCTCCATTTaGAATTCGTTGAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: AVRAQTSDQNTTPAASPIETPSI*NSLKKF
Trigger: GAACTTCTTCAACGAATTTCAAATGGAGGGTGTCTC...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR TCA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTGAGACACCCTCCATTTaGAATTCGTTGAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGETPSI*NSLKKF
Trigger: GAACTTCTTCAACGAATTTCAAATGGAGGGTGTCTC...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS-3UTR TCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATAGGACAGCGCAGGGATaGAATACTGAAGGGACACGT +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHRTAQG*NTEGTR
Trigger: ACGTGTCCCTTCAGTATTTCATCCCTGCGCTGTCCT...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp GATCCGATACACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCTTCTGTCCTCATGGGTaGTTTCAGAGGCTAATGGAG +
Preference number: 4 (lower is better)
Translates to: DPIHCGLSHPDKVSACQLFCPHG*FQRLME
Trigger: CTCCATTAGCCTCTGAAAGCACCCATGAGGACAGAA...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR GCA 90 bp TTCTTTCTGTCACTGGGCTCCAAGGGGCAGGAGCAGCGGGGTGAACACACTGAAGTGAACACACTGAAATaGAAGACTGACTGTGCGCTA +
Preference number: 4 (lower is better)
Translates to: FFLSLGSKGQEQRGEHTEVNTLK*KTDCAL
Trigger: TAGCGCACAGTCAGTCTTGCATTTCAGTGTGTTCAC...TTCAGTGTGTTCACCCCGCTGCTCCTGCCCCTTGGAGCCCAGTGACAGAAAGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATAGAGACTCCAAATGCTaGAGCTGTGACACCCCACAG +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHRDSKC*SCDTPQ
Trigger: CTGTGGGGTGTCACAGCTGCAGCATTTGGAGTCTCT...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp GAACGACAGATCCGATACACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGGAGGGTGCAGGTTTTaGCAAGCTTGGCTATCATGT +
Preference number: 4 (lower is better)
Translates to: ERQIRYTAASPILTKSLHGGCRF*QAWLSC
Trigger: ACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCC...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHKALAF*AVFKAR
Trigger: TCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTT...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCTTTATGGGGATGTCATaGGTCACAATGCGGCTACTG +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLFMGMS*VTMRLL
Trigger: CAGTAGCCGCATTGTGACCCATGACATCCCCATAAA...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCTGCATAAGGCCTTTGTaGGATTTACTTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: AVRAQTSDQNTTPAASPICIRPL*DLLVVQ
Trigger: CTGGACAACAAGTAAATCCCACAAAGGCCTTATGCA...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR TCA 90 bp AACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGAGAGACACCCTCCATTTaGAATTCGTTGAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: NTCGLSHPDKVSACQLQRETPSI*NSLKKF
Trigger: GAACTTCTTCAACGAATTTCAAATGGAGGGTGTCTC...TCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR TCA 90 bp TCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTACCCCAGCTCCACGGAGACCGTaGGGCAGGGAAAGTGTTTAT +
Preference number: 4 (lower is better)
Translates to: SSLLSGALGLTIGMTVTPAPRRP*GRESVY
Trigger: ATAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGC...TGGGGTAACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR TCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTCGCTACAGGCCGTGCTaGGCTAGAGCCTCTGCCTGG +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTRYRPC*ARASAW
Trigger: CCAGGCAGAGGCTCTAGCTCAGCACGGCCTGTAGCG...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp CCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTCTCTATGAAAAATTaGAAATTAGCTGGGTGTGGT +
Preference number: 4 (lower is better)
Translates to: PAASPILTKSLHANSSDRVSMKN*KLAGCG
Trigger: ACCACACCCAGCTAATTTTCAATTTTTCATAGAGAC...CCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp ATGGGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCTCCAGATATCGCTCCTaGCCGGCTGAGGAAAAGATC +
Preference number: 4 (lower is better)
Translates to: MGPLASSLLSGALGLTIGSRYRS*PAEEKI
Trigger: GATCTTTTCCTCAGCCGGTCAGGAGCGATATCTGGA...GCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CCA 90 bp GGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: GPLASSLLSGALGLTIGMKALAF*AVFKAR
Trigger: TCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTT...CATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CCA 90 bp AACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGATGCATAAGGCCTTTGTaGGATTTACTTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: NTCGLSHPDKVSACQLQRCIRPL*DLLVVQ
Trigger: CTGGACAACAAGTAAATCCCACAAAGGCCTTATGCA...TCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTTTTGGGAGGCCCAGGTaGGCGGGTGGCTTGAGCCCA +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTFGRPR*AGGLSP
Trigger: TGGGCTCAAGCCACCCGCCCACCTGGGCCTCCCAAA...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCCACCCCACAGTGCTCTaGGTAACCAAGGCAGTGGCG +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNIHPTVL*VTKAVA
Trigger: CGCCACTGCCTTGGTTACTCAGAGCACTGTGGGGTG...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp TCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTACCCCATCGCTCCTGACCGGCTaGGGAAAAGATCAAGTCATC +
Preference number: 4 (lower is better)
Translates to: SSLLSGALGLTIGMTVTPSLLTG*GKDQVI
Trigger: GATGACTTGATCTTTTCCTCAGCCGGTCAGGAGCGA...TGGGGTAACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CCA 90 bp GGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGGGAGGGTGCAGGTTTTaGCAAGCTTGGCTATCATGT +
Preference number: 4 (lower is better)
Translates to: GPLASSLLSGALGLTIGMGGCRF*QAWLSC
Trigger: ACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCC...CATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CCA 90 bp TACACCACAGGGATACATAGTCCAGTCTCAATTCCTTTGTTCTTCACCCAAGCACTGTCAGCTACTTGGTaGCACAGCTTCTCCCCCTGG +
Preference number: 4 (lower is better)
Translates to: YTTGIHSPVSIPLFFTQALSATW*HSFSPW
Trigger: CCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAG...TGCTTGGGTGAAGAACAAAGGAATTGAGACTGGACTATGTATCCCTGTGGTGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTCTCCCTGCTCACGTGTaGAGTGGTTCAGACAGGCCC +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTLPAHV*SGSDRP
Trigger: GGGCCTGTCTGAACCACTTCACACGTGAGCAGGGAG...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR GCA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCTTCCTAATATCTATGTaGACTTCAGCCATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLFLISM*TSAMCS
Trigger: GGAACACATGGCTGAAGTGCACATAGATATTAGGAA...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR GCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTCCTCTCCGGCCTCCCTaGTCACGTGTGAAGTGGTTC +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTPLRPP*SRVKWF
Trigger: GAACCACTTCACACGTGAGCAGGGAGGCCGGAGAGG...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CCA 90 bp AGATCTGTCAGCTACTTGGTGGCACAGCTTCTCCCCCTGGTGGCTAACTGCCCCGTTCTTTTAATTGGATaGAACAAGGTGATTGCTGAT +
Preference number: 4 (lower is better)
Translates to: RSVSYLVAQLLPLVANCPVLLIG*NKVIAD
Trigger: ATCAGCAATCACCTTGTTCCATCCAATTAAAAGAAC...GGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp AGATCTGTCAGCTACTTGGTGGCACAGCTTCTCCCCCTGGTGGCTAACTGCCCCATCAGTTCTTTTAATTaGATGGAACAAGGTGATTGC +
Preference number: 4 (lower is better)
Translates to: RSVSYLVAQLLPLVANCPISSFN*MEQGDC
Trigger: GCAATCACCTTGTTCCATCCAATTAAAAGAACTGAT...GGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp ATGGGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCGTGAGCAAGAGGAAATaGGCCCTTTGGCATCATCTT +
Preference number: 4 (lower is better)
Translates to: MGPLASSLLSGALGLTIGVSKRK*ALWHHL
Trigger: AAGATGATGCCAAAGGGCCCATTTCCTCTTGCTCAC...GCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR TCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTAAAAGCGTCGCGCCCTaGGTGTCCCCGCCCGGAAAC +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTKSVAP*VSPPGN
Trigger: GTTTCCGGGCGGGGACACTCAGGGCGCGACGCTTTT...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCTTGGGAAGTGGAGGCTaGAGTAAGCCAAGATCGCGC +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNILGSGG*SKPRSR
Trigger: GCGCGATCTTGGCTTACTGCAGCCTCCACTTCCCAA...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp TGGAGGTTATGTAACTTGATCCGAATTCTACAGAGGATGGAGACCCTGCACAGAAGAGGATGGAGACCCTaGACAGATCTGTCAGCTACT +
Preference number: 4 (lower is better)
Translates to: WRLCNLIRILQRMETLHRRGWRP*TDLSAT
Trigger: AGTAGCTGACAGATCTGTGCAGGGTCTCCATCCTCT...TCTGTGCAGGGTCTCCATCCTCTGTAGAATTCGGATCAAGTTACATAACCTCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCCTGATTCGTGTGAAGTaGTTCAGACAGGCCCCGTCC +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNILIRVK*FRQAPS
Trigger: GGACGGGGCCTGTCTGAACCACTTCACACGAATCAG...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCACTAGCACTCCAGACTaGCGACAGAGTGAGACTCCG +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNITSTPD*RQSETP
Trigger: CGGAGTCTCACTCTGTCGCCAGTCTGGAGTGCTAGT...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp GATAATGTTTATCATGTCCACCTCCACAGGACAATGAGATGTAATTATAATAGGGCAGTGGCGGCGGGGTaGCAGAGGCTGTTCTTTCTG +
Preference number: 4 (lower is better)
Translates to: DNVYHVHLHRTMRCNYNRAVAAG*QRLFFL
Trigger: CAGAAAGAACAGCCTCTGTCACCCCGCCGCCACTGC...CCTATTATAATTACATCTCATTGTCCTGTGGAGGTGGACATGATAAACATTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR TCA 90 bp GGGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATTGGCTATCATGTTACTaGTTCCTAAAGCAGGGGTTA +
Preference number: 4 (lower is better)
Translates to: GPFGIIFTFRSSRVNHRHWLSCY*FLKQGL
Trigger: TAACCCCTGCTTTAGGAATCAGTAACATGATAGCCA...ATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR TCA 90 bp TCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTACCCCAGTTAGCCCTAAGCCATaGAATTCTTCTCTTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SSLLSGALGLTIGMTVTPVSPKP*NSSLLG
Trigger: GCCAAGAAGAGAAGAATTTCATGGCTTAGGGCTAAC...TGGGGTAACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR GCA 90 bp TTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTTCTTCTTGGCTTTCGTaGACATCCAGATATCGCTCC +
Preference number: 4 (lower is better)
Translates to: LASSLLSGALGLTIGMTVSSWLS*TSRYRS
Trigger: GGAGCGATATCTGGATGTGCACGAAAGCCAAGAAGA...AACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CCA 90 bp TTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTTTTATGGGGATGTCATaGGTCACAATGCGGCTACTG +
Preference number: 4 (lower is better)
Translates to: LASSLLSGALGLTIGMTVFMGMS*VTMRLL
Trigger: CAGTAGCCGCATTGTGACCCATGACATCCCCATAAA...AACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CCA 90 bp TGGAGGTTATGTAACTTGATCCGAATTCTACAGAGGATGGAGACCCTGCACAGATTTATGGGGATGTCATaGGTCACAATGCGGCTACTG +
Preference number: 4 (lower is better)
Translates to: WRLCNLIRILQRMETLHRFMGMS*VTMRLL
Trigger: CAGTAGCCGCATTGTGACCCATGACATCCCCATAAA...TCTGTGCAGGGTCTCCATCCTCTGTAGAATTCGGATCAAGTTACATAACCTCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTTGTTCTTTCTGTCACTaGGCTCCAAGGGGCAGGAGC +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTCSFCH*APRGRS
Trigger: GCTCCTGCCCCTTGGAGCCCAGTGACAGAAAGAACA...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCTTTGAGAGGCCAAGGTaGGTGATCACGAGGTCGAGA +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNIFERPR*VITRSR
Trigger: TCTCGACCTCGTGATCACCCACCTTGGCCTCTCAAA...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp ATGGGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCAGGAAATGGGCCCTTTaGCATCATCTTTACTTTCAG +
Preference number: 4 (lower is better)
Translates to: MGPLASSLLSGALGLTIGRKWAL*HHLYFQ
Trigger: CTGAAAGTAAAGATGATGCCAAAGGGCCCATTTCCT...GCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR TCA 90 bp TCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTACCCCAGAGACACCCTCCATTTaGAATTCGTTGAAGAAGTTC +
Preference number: 4 (lower is better)
Translates to: SSLLSGALGLTIGMTVTPETPSI*NSLKKF
Trigger: GAACTTCTTCAACGAATTTCAAATGGAGGGTGTCTC...TGGGGTAACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR TCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTCGATGTGCGGTGCTGTaGGGGCACAGACCAGTGATC +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTRCAVL*GHRPVI
Trigger: GATCACTGGTCTGTGCCCTCACAGCACCGCACATCG...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTGAGAGAGACTCCAAATaGTGCAGCTGTGACACCCCA +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTERDSK*CSCDTP
Trigger: TGGGGTGTCACAGCTGCAGCATTTGGAGTCTCTCTC...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp ACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTGCGGCCTGCATAAGGCCTTTGTaGGATTTACTTGTTGTCCAG +
Preference number: 4 (lower is better)
Translates to: TLNRRVFFPERQIRYTAACIRPL*DLLVVQ
Trigger: CTGGACAACAAGTAAATCCCACAAAGGCCTTATGCA...GGCCGCAGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CCA 90 bp GGGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATAAATTCTTCTCTTCTTaGCTTTCGTGCACATCCAGA +
Preference number: 4 (lower is better)
Translates to: GPFGIIFTFRSSRVNHRHKFFSS*LSCTSR
Trigger: TCTGGATGTGCACGAAAGCCAAGAAGAGAAGAATTT...ATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR TCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCGTCTGGGTGACAGAATaGGACCGTCTCAAACAAAAC +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNIVWVTE*DRLKQN
Trigger: GTTTTGTTTGAGACGGTCTCATTCTGTCACCCAGAC...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATTGTTATTCACAATATTaGATAAGGCCTTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: SDQNTTPAASPILTKSLHCYSQY*IRPLWD
Trigger: ATCCCACAAAGGCCTTATGCAATATTGTGAATAACA...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCTTTATGGGGATGTCATaGGTCACAATGCGGCTACTG +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNIFMGMS*VTMRLL
Trigger: CAGTAGCCGCATTGTGACCCATGACATCCCCATAAA...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR CCA 90 bp ACTGAATTTCAACCTTTTTACATGAAGAGACCTCAACAGGTAGGTTATCTGAAACACAGCTTCTCCCCCTaGTGGCTAACTGCCCCACTA +
Preference number: 4 (lower is better)
Translates to: TEFQPFYMKRPQQVGYLKHSFSP*WLTAPL
Trigger: TAGTGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTG...TTTCAGATAACCTACCTGTTGAGGTCTCTTCATGTAAAAAGGTTGAAATTCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTTCCTGGCCAACACAGTaGAACTCCGTCTCTACTAAA +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTSWPTQ*NSVSTK
Trigger: TTTAGTAGAGACGGAGTTTCACTGTGTTGGCCAGGA...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTTCAGAACACAACACCTaGGGCCTCTCCCATCCTGAC +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTSEHNT*GLSHPD
Trigger: GTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGA...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTTACAGTGTGTCGATGTaGGGTGCTGTGAGGGCACAG +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTYSVSM*GAVRAQ
Trigger: CTGTGCCCTCACAGCACCGCACATCGACACACTGTA...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR GCA 90 bp CCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCCTTTGTTCTTCACCCACCTTTCTGAATCCATaGCAGGTGAGAAATAGAAAT +
Preference number: 4 (lower is better)
Translates to: PTTPQGYIVQSQFLCSSPTFLNP*QVRNRN
Trigger: ATTTCTATTTCTCACCTGGCATGGATTCAGAAAGGT...GGGTGAAGAACAAAGGAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp GATAATGTTTATCATGTCCACCTCCACAGGACAATGAGATGTAATTATAATAGGAGGACAGCGCAGGGATaGAATACTGAAGGGACACGT +
Preference number: 4 (lower is better)
Translates to: DNVYHVHLHRTMRCNYNRRTAQG*NTEGTR
Trigger: ACGTGTCCCTTCAGTATTTCATCCCTGCGCTGTCCT...CCTATTATAATTACATCTCATTGTCCTGTGGAGGTGGACATGATAAACATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTGACAAAGTCTCTGCATaGCAACTCCAGCGACAGGGT +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTDKVSA*QLQRQG
Trigger: ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTC...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR CCA 90 bp GATAATGTTTATCATGTCCACCTCCACAGGACAATGAGATGTAATTATAATAGGAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGA +
Preference number: 4 (lower is better)
Translates to: DNVYHVHLHRTMRCNYNRKALAF*AVFKAR
Trigger: TCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTT...CCTATTATAATTACATCTCATTGTCCTGTGGAGGTGGACATGATAAACATTATC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR CCA 90 bp ACTGAATTTCAACCTTTTTACATGAAGAGACCTCAACAGGTAGGTTATCTGAAAAAATCCAGAAGGGTCTaGGGCTGCTGTTGGGTTACC +
Preference number: 4 (lower is better)
Translates to: TEFQPFYMKRPQQVGYLKKSRRV*GCCWVT
Trigger: GGTAACCCAACAGCAGCCCCAGACCCTTCTGGATTT...TTTCAGATAACCTACCTGTTGAGGTCTCTTCATGTAAAAAGGTTGAAATTCAGT
42% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp GTTTCTACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTCACATCTACCAGTACTaGATCAGCTTTGATGTTCAG +
Preference number: 4 (lower is better)
Translates to: VSTLNRRVFFPERQIRYTHIYQY*ISFDVQ
Trigger: CTGAACATCAAAGCTGATTCAGTACTGGTAGATGTG...AGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGTAGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp GGAGAATATAAGAACAAATGTATCTACCTTTCTGAATCCATGCCAGGTGAGAAAAGGCTACCAGACTTCTaGCATCCCCTCATATACCAT +
Preference number: 4 (lower is better)
Translates to: GEYKNKCIYLSESMPGEKRLPDF*HPLIYH
Trigger: ATGGTATATGAGGGGATGGCAGAAGTCTGGTAGCCT...TTTCTCACCTGGCATGGATTCAGAAAGGTAGATACATTTGTTCTTATATTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR TCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCATGAGCAACATGAAGTaGTATGTTTATCCAACTGTG +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNIMSNMK*YVYPTV
Trigger: CACAGTTGGATAAACATATCACTTCATGTTGCTCAT...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CCA 90 bp GATAATGTTTATCATGTCCACCTCCACAGGACAATGAGATGTAATTATAATAGGTTTATGGGGATGTCATaGGTCACAATGCGGCTACTG +
Preference number: 4 (lower is better)
Translates to: DNVYHVHLHRTMRCNYNRFMGMS*VTMRLL
Trigger: CAGTAGCCGCATTGTGACCCATGACATCCCCATAAA...CCTATTATAATTACATCTCATTGTCCTGTGGAGGTGGACATGATAAACATTATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR TCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTATGTTTCAGGGAGAATaGGCACATCTACCAGTACTG +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTMFQGE*AHLPVL
Trigger: CAGTACTGGTAGATGTGCTCATTCTCCCTGAAACAT...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCTGTTATTCACAATATTaGATAAGGCCTTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: GRMSTSTSTESALMFRNICYSQY*IRPLWD
Trigger: ATCCCACAAAGGCCTTATGCAATATTGTGAATAACA...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR TCA 90 bp GATAATGTTTATCATGTCCACCTCCACAGGACAATGAGATGTAATTATAATAGGCACATCTACCAGTACTaGATCAGCTTTGATGTTCAG +
Preference number: 4 (lower is better)
Translates to: DNVYHVHLHRTMRCNYNRHIYQY*ISFDVQ
Trigger: CTGAACATCAAAGCTGATTCAGTACTGGTAGATGTG...CCTATTATAATTACATCTCATTGTCCTGTGGAGGTGGACATGATAAACATTATC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTTTCCTAATATCTATGTaGACTTCAGCCATGTGTTCC +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTFLISM*TSAMCS
Trigger: GGAACACATGGCTGAAGTGCACATAGATATTAGGAA...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR GCA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTTGTTATTCACAATATTaGATAAGGCCTTTGTGGGAT +
Preference number: 4 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTCYSQY*IRPLWD
Trigger: ATCCCACAAAGGCCTTATGCAATATTGTGAATAACA...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS CCA 90 bp CCGAAACTTCATGGCCGCGGATGGCGCAGCCGCGGCGGGCCTCTGTaGGTAACAGAAAAGCGTCGCGCCCTGAGTGTCCCCGCCCGGAAA +
Preference number: 5 (lower is better)
Translates to: PKLHGRGWRSRGGPL*VTEKRRALSVPARK
Trigger: TTTCCGGGCGGGGACACTCAGGGCGCGACGCTTTTCTGTTACCCACAGAGGCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAGTTTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS CCA 90 bp ACAGGCCCCGTCCACGATCTTGGCCCGAAACTTCATGGCCGCGGATaGCGCAGCCGCGGCGGGCCTCTGTGGGTAACAGAAAAGCGTCGC +
Preference number: 5 (lower is better)
Translates to: TGPVHDLGPKLHGRG*RSRGGPLWVTEKRR
Trigger: GCGACGCTTTTCTGTTACCCACAGAGGCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGGCCTGT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS CCA 90 bp AGTGGTTCAGACAGGCCCCGTCCACGATCTTGGCCCGAAACTTCATaGCCGCGGATGGCGCAGCCGCGGCGGGCCTCTGTGGGTAACAGA +
Preference number: 5 (lower is better)
Translates to: SGSDRPRPRSWPETS*PRMAQPRRASVGNR
Trigger: TCTGTTACCCACAGAGGCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGGCCTGTCTGAACCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CAA 90 bp TGGCACAGCTTCTCCCCCTGGTGGCTAACTGCCCCACTACACCACAGGGATACAAGATCTGTCAGCTACTaGGTGGCACAGCTTCTCCCC +
Preference number: 5 (lower is better)
Translates to: WHSFSPWWLTAPLHHRDTRSVSY*VAQLLP
Trigger: GGGGAGAAGCTGTGCCACCAAGTAGCTGACAGATCT...TGTATCCCTGTGGTGTAGTGGGGCAGTTAGCCACCAGGGGGAGAAGCTGTGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CAA 90 bp TTCTTTCTGTCACTGGGCTCCAAGGGGCAGGAGCAGCGGGGTGAACACACTGAACGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATG +
Preference number: 5 (lower is better)
Translates to: FFLSLGSKGQEQRGEHTERRVQV*ASLAIM
Trigger: CATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCG...TTCAGTGTGTTCACCCCGCTGCTCCTGCCCCTTGGAGCCCAGTGACAGAAAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CAA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCGAGAATCGCTTGAACTaGGGAAGTGGAGGCTGCAGT +
Preference number: 5 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLENRLN*GSGGCS
Trigger: ACTGCAGCCTCCACTTCCCAAGTTCAAGCGATTCTC...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CAA 90 bp CCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATT +
Preference number: 5 (lower is better)
Translates to: PAASPILTKSLHANSSDRQVLAS*AIMLLI
Trigger: AATCAGTAACATGATAGCCAAGCTTGCCAAAACCTG...CCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CAA 90 bp TCTTGGAGGTTATGTAACTTGATCCGAATTCTACAGAGGATGGAGACCCTGCACCTTCTACTCCTGCTCTaGCTGCCCGGGGACTGTCTC +
Preference number: 5 (lower is better)
Translates to: SWRLCNLIRILQRMETLHLLLLL*LPGDCL
Trigger: GAGACAGTCCCCGGGCAGCAAGAGCAGGAGTAGAAG...GTGCAGGGTCTCCATCCTCTGTAGAATTCGGATCAAGTTACATAACCTCCAAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CAA 90 bp TCCACACGCCCAGGCTACCAGACTTCTGCCATCCCCTCATATACCATCGGGCACTGGAGGTTATGTAACTaGATCCGAATTCTACAGAGG +
Preference number: 5 (lower is better)
Translates to: STRPGYQTSAIPSYTIGHWRLCN*IRILQR
Trigger: CCTCTGTAGAATTCGGATCAAGTTACATAACCTCCA...GTGCCCGATGGTATATGAGGGGATGGCAGAAGTCTGGTAGCCTGGGCGTGTGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS TCA 90 bp TCTGCATGCCAACTCCAGCGACAGGGTGCTAGGACAGCGCAGGGATaGAATACTGAAGGGACACGTCTTCATGAAGCAGATCAAAATGCA +
Preference number: 5 (lower is better)
Translates to: SACQLQRQGARTAQG*NTEGTRLHEADQNA
Trigger: TGCATTTTGATCTGCTTCATGAAGACGTGTCCCTTCAGTATTTCATCCCTGCGCTGTCCTAGCACCCTGTCGCTGGAGTTGGCATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS-3UTR CAA 90 bp AACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACTTTGTGGGATTTACTaGTTGTCCAGCAAGAAACTG +
Preference number: 5 (lower is better)
Translates to: NTCGLSHPDKVSACQLQRLCGIY*LSSKKL
Trigger: CAGTTTCTTGCTGGACAACAAGTAAATCCCACAAAG...TCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CAA 90 bp GAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATT +
Preference number: 5 (lower is better)
Translates to: EHNTCGLSHPDKVSACQLQVLAS*AIMLLI
Trigger: AATCAGTAACATGATAGCCAAGCTTGCCAAAACCTG...GAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CAA 90 bp GCTGTGAGGGCACAGACCAGTGATCAGAACACAACACCTGCGGCCTCTCCCATCTGTTTATTAGTCAGTTaGATTTTCAAAGCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: AVRAQTSDQNTTPAASPICLLVS*IFKALA
Trigger: TGCCAGGGCTTTGAAAATCAAACTGACTAATAAACA...GATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACTGGTCTGTGCCCTCACAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CAA 90 bp TGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATGCCAACTCCAGCGACAGGGTTTGTTATTCACAATATaGCATAAGGCCTTTGTGGGA +
Preference number: 5 (lower is better)
Translates to: CGLSHPDKVSACQLQRQGLLFTI*HKAFVG
Trigger: TCCCACAAAGGCCTTATGCAATATTGTGAATAACAA...ACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS TCA 90 bp AAATTCTTCTCTTCTTGGCTTTCGTGCACATCCAGATATCGCTCCTaGCCGGCTGAGGAAAAGATCAAGTCATCAGGATCTGGGACCACC +
Preference number: 5 (lower is better)
Translates to: KFFSSWLSCTSRYRS*PAEEKIKSSGSGTT
Trigger: GGTGGTCCCAGATCCTGATGACTTGATCTTTTCCTCAGCCGGTCAGGAGCGATATCTGGATGTGCACGAAAGCCAAGAAGAGAAGAATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CAA 90 bp GGTCTTCTTTCCAGAACGACAGATCCGATACACTGCGGCCTCTCCCATCCTGACTTGTTATTCACAATATaGCATAAGGCCTTTGTGGGA +
Preference number: 5 (lower is better)
Translates to: GLLSRTTDPIHCGLSHPDLLFTI*HKAFVG
Trigger: TCCCACAAAGGCCTTATGCAATATTGTGAATAACAA...GTCAGGATGGGAGAGGCCGCAGTGTATCGGATCTGTCGTTCTGGAAAGAAGACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CAA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCAGGCAGGAGAATCGCTaGAACTTGGGAAGTGGAGGC +
Preference number: 5 (lower is better)
Translates to: GRMSTSTSTESALMFRNIRQENR*NLGSGG
Trigger: GCCTCCACTTCCCAAGTTCAAGCGATTCTCCTGCCT...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CAA 90 bp ATGGGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCGAGGAAATGGGCCCTTaGGCATCATCTTTACTTTCA +
Preference number: 5 (lower is better)
Translates to: MGPLASSLLSGALGLTIGEEMGP*ASSLLS
Trigger: TGAAAGTAAAGATGATGCCAAAGGGCCCATTTCCTC...GCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS CCA 90 bp AAGTCCTTCCACAATTTCCTAGGAATCACCTTTATGGGGATGTCATaGGTCACAATGCGGCTACTGCTTGACATAGATAACAGCTCCACG +
Preference number: 5 (lower is better)
Translates to: KSFHNFLGITFMGMS*VTMRLLLDIDNSST
Trigger: CGTGGAGCTGTTATCTATGTCAAGCAGTAGCCGCATTGTGACCCATGACATCCCCATAAAGGTGATTCCTAGGAAATTGTGGAAGGACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000432627.5
ENST00000433977.5
ENST00000442024.5
ENST00000446009.1
ENST00000458191.5
CDS-3UTR CAA 90 bp AGTGATCAGAACACAACACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATAGAGACACCCTCCATTaGAAATTCGTTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SDQNTTPAASPILTKSLHRDTLH*KFVEEV
Trigger: AACTTCTTCAACGAATTTCAAATGGAGGGTGTCTCT...ATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGTGTTGTGTTCTGATCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS-3UTR CAA 90 bp TGGAGGTTATGTAACTTGATCCGAATTCTACAGAGGATGGAGACCCTGCACAGAGGAGTAGGACAGGAATaGAATAGCTGGAAGGGATCT +
Preference number: 5 (lower is better)
Translates to: WRLCNLIRILQRMETLHRGVGQE*NSWKGS
Trigger: AGATCCCTTCCAGCTATTCAATTCCTGTCCTACTCC...TCTGTGCAGGGTCTCCATCCTCTGTAGAATTCGGATCAAGTTACATAACCTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS-3UTR CAA 90 bp CCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATT +
Preference number: 5 (lower is better)
Translates to: PLASSLLSGALGLTIGMTQVLAS*AIMLLI
Trigger: AATCAGTAACATGATAGCCAAGCTTGCCAAAACCTG...GGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CAA 90 bp ACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTGCGGCCCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATT +
Preference number: 5 (lower is better)
Translates to: TLNRRVFFPERQIRYTAAQVLAS*AIMLLI
Trigger: AATCAGTAACATGATAGCCAAGCTTGCCAAAACCTG...GGCCGCAGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CAA 90 bp ACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTGCGGCCCTTTGTGGGATTTACTaGTTGTCCAGCAAGAAACTG +
Preference number: 5 (lower is better)
Translates to: TLNRRVFFPERQIRYTAALCGIY*LSSKKL
Trigger: CAGTTTCTTGCTGGACAACAAGTAAATCCCACAAAG...GGCCGCAGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CAA 90 bp TTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTACCCCATGTTAGAAATTCTTCTCTTCTaGGCTTTCGTGCACATCCAG +
Preference number: 5 (lower is better)
Translates to: FTFRSSRVNHRHDRYPMLEILLF*AFVHIQ
Trigger: CTGGATGTGCACGAAAGCCAAGAAGAGAAGAATTTC...TAACATGGGGTAACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CAA 90 bp TCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGACCGTTACCCCAAGAGACACCCTCCATTaGAAATTCGTTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: SSLLSGALGLTIGMTVTPRDTLH*KFVEEV
Trigger: AACTTCTTCAACGAATTTCAAATGGAGGGTGTCTCT...TGGGGTAACGGTCATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CAA 90 bp ACTCTAAATAGAAGGGTCTTCTTTCCAGAACGACAGATCCGATACACTGCGGCCAGAGACACCCTCCATTaGAAATTCGTTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: TLNRRVFFPERQIRYTAARDTLH*KFVEEV
Trigger: AACTTCTTCAACGAATTTCAAATGGAGGGTGTCTCT...GGCCGCAGTGTATCGGATCTGTCGTTCTGGAAAGAAGACCCTTCTATTTAGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS-3UTR CAA 90 bp GGCCCTTTGGCATCATCTTTACTTTCAGGAGCTCTAGGGTTAACCATCGGCATGTGTTTATTAGTCAGTTaGATTTTCAAAGCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: GPLASSLLSGALGLTIGMCLLVS*IFKALA
Trigger: TGCCAGGGCTTTGAAAATCAAACTGACTAATAAACA...CATGCCGATGGTTAACCCTAGAGCTCCTGAAAGTAAAGATGATGCCAAAGGGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS-3UTR CAA 90 bp CCCACTACACCACAGGGATACATAGTCCAGTCTCAATTCCTTTGTTCTTCACCCTGTTTATTAGTCAGTTaGATTTTCAAAGCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: PTTPQGYIVQSQFLCSSPCLLVS*IFKALA
Trigger: TGCCAGGGCTTTGAAAATCAAACTGACTAATAAACA...GGGTGAAGAACAAAGGAATTGAGACTGGACTATGTATCCCTGTGGTGTAGTGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442024.5
CDS CCA 90 bp GGAAAGTGTTTATTAGTCAGTTTGATTTTCAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGAGATAAGTTTTCCGATGTTAGCTCT +
Preference number: 5 (lower is better)
Translates to: GKCLLVSLIFKALAF*AVFKARDKFSDVSS
Trigger: AGAGCTAACATCGGAAAACTTATCTCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAATAAACACTTTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000432627.5
ENST00000433977.5
ENST00000442024.5
ENST00000446009.1
ENST00000458191.5
ENST00000468868.1
CDS-3UTR CAA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCAGAGACACCCTCCATTaGAAATTCGTTGAAGAAGTT +
Preference number: 5 (lower is better)
Translates to: GRMSTSTSTESALMFRNIRDTLH*KFVEEV
Trigger: AACTTCTTCAACGAATTTCAAATGGAGGGTGTCTCT...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR CAA 90 bp GGGAGAATGAGCACATCTACCAGTACTGAATCAGCTTTGATGTTCAGAAACATCTGTCTCTATGAAAAATaGAAAATTAGCTGGGTGTGG +
Preference number: 5 (lower is better)
Translates to: GRMSTSTSTESALMFRNICLYEK*KISWVW
Trigger: CCACACCCAGCTAATTTTCAATTTTTCATAGAGACA...GATGTTTCTGAACATCAAAGCTGATTCAGTACTGGTAGATGTGCTCATTCTCCC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS-3UTR CAA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTTGTTTATTAGTCAGTTaGATTTTCAAAGCCCTGGCA +
Preference number: 5 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTCLLVS*IFKALA
Trigger: TGCCAGGGCTTTGAAAATCAAACTGACTAATAAACA...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS-3UTR CAA 90 bp ATGGTCTCATCACTTAACACAGATGATACCTTAGAAGTTTCGTTTGTTTCTACTTTGTTATTCACAATATaGCATAAGGCCTTTGTGGGA +
Preference number: 5 (lower is better)
Translates to: MVSSLNTDDTLEVSFVSTLLFTI*HKAFVG
Trigger: TCCCACAAAGGCCTTATGCAATATTGTGAATAACAA...AGTAGAAACAAACGAAACTTCTAAGGTATCATCTGTGTTAAGTGATGAGACCAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000458191.5
CDS CCA 72 bp CATGGCCGCGGATGGCGCAGCCGCGGCGGGCCTCTGTaGGTAACAGAAAAGCGTCGCGCCCTGAGTGTCCCC +
Preference number: 6 (lower is better)
Translates to: HGRGWRSRGGPL*VTEKRRALSVP
Trigger: GGGGACACTCAGGGCGCGACGCTTTTCTGTTACCCACAGAGGCCCGCCGCGGCTGCGCCATCCGCGGCCATG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS CCA 72 bp GACAGGCCCCGTCCACGATCTTGGCCCGAAACTTCATaGCCGCGGATGGCGCAGCCGCGGCGGGCCTCTGTG +
Preference number: 6 (lower is better)
Translates to: DRPRPRSWPETS*PRMAQPRRASV
Trigger: CACAGAGGCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGGCCTGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000258774.10
CDS CAA 90 bp CCCTGCTCACGTGTGAAGTGGTTCAGACAGGCCCCGTCCACGATCTaGGCCCGAAACTTCATGGCCGCGGATGGCGCAGCCGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: PCSRVKWFRQAPSTI*ARNFMAADGAAAAG
Trigger: GCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGGCCTGTCTGAACCACTTCACACGTGAGCAGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000432325.5
ENST00000446009.1
ENST00000458191.5
CDS CAA 90 bp TTACTGATTCGTGTGAAGTGGTTCAGACAGGCCCCGTCCACGATCTaGGCCCGAAACTTCATGGCCGCGGATGGCGCAGCCGCGGCGGGC +
Preference number: 6 (lower is better)
Translates to: LLIRVKWFRQAPSTI*ARNFMAADGAAAAG
Trigger: GCCCGCCGCGGCTGCGCCATCCGCGGCCATGAAGTTTCGGGCCAAGATCGTGGACGGGGCCTGTCTGAACCACTTCACACGAATCAGTAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000468868.1
CDS GCA 72 bp ACCTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATaGCAACTCCAGCGACAGGGTGCTAGGACAGCGCAG +
Preference number: 6 (lower is better)
Translates to: TCGLSHPDKVSA*QLQRQGARTAQ
Trigger: CTGCGCTGTCCTAGCACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000432325.5
CDS GCA 72 bp CACTGCGGCCTCTCCCATCCTGACAAAGTCTCTGCATaGCAACTCCAGCGACAGGGTGCTAGGACAGCGCAG +
Preference number: 6 (lower is better)
Translates to: HCGLSHPDKVSA*QLQRQGARTAQ
Trigger: CTGCGCTGTCCTAGCACCCTGTCGCTGGAGTTGGCATGCAGAGACTTTGTCAGGATGGGAGAGGCCGCAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458191.5
CDS CAA 72 bp TCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCCGCGCGCTCACTGC +
Preference number: 6 (lower is better)
Translates to: SGLMRRVQVLAS*AIMLLIPRAHC
Trigger: GCAGTGAGCGCGCGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432325.5
ENST00000458191.5
CDS CAA 90 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCCGCGCGCTCACTGCTTCCTTCCG +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQVLAS*AIMLLIPRAHCFLP
Trigger: CGGAAGGAAGCAGTGAGCGCGCGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432325.5
ENST00000458191.5
CDS TCA 72 bp CAACTCCAGCGACAGGGTGCTAGGACAGCGCAGGGATaGAATACTGAAGGGACACGTCTTCATGAAGCAGAT +
Preference number: 6 (lower is better)
Translates to: QLQRQGARTAQG*NTEGTRLHEAD
Trigger: ATCTGCTTCATGAAGACGTGTCCCTTCAGTATTTCATCCCTGCGCTGTCCTAGCACCCTGTCGCTGGAGTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS TCA 72 bp GCTTTCGTGCACATCCAGATATCGCTCCTGACCGGCTaGGGAAAAGATCAAGTCATCAGGATCTGGGACCAC +
Preference number: 6 (lower is better)
Translates to: AFVHIQISLLTG*GKDQVIRIWDH
Trigger: GTGGTCCCAGATCCTGATGACTTGATCTTTTCCTCAGCCGGTCAGGAGCGATATCTGGATGTGCACGAAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS CAA 90 bp AGGATGAAGTTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCCGCGCGCTCACTGC +
Preference number: 6 (lower is better)
Translates to: RMKLSLSGLMRRVQV*ASLAIMLLIPRAHC
Trigger: GCAGTGAGCGCGCGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432325.5
ENST00000458191.5
CDS CAA 90 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCTGCTTCCTTCCGTTCCTCCCTCG +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQVLAS*AIMLLILLPSVPPS
Trigger: CGAGGGAGGAACGGAAGGAAGCAGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446009.1
CDS CAA 72 bp TCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCGTGTGAAGTGGTTC +
Preference number: 6 (lower is better)
Translates to: SGLMRRVQVLAS*AIMLLIRVKWF
Trigger: GAACCACTTCACACGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000468868.1
CDS CAA 72 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCCGCGC +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQV*ASLAIMLLIPR
Trigger: GCGCGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432325.5
ENST00000458191.5
CDS CAA 72 bp TCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCCTAAAGCAGGGGTT +
Preference number: 6 (lower is better)
Translates to: SGLMRRVQVLAS*AIMLLIPKAGV
Trigger: AACCCCTGCTTTAGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000432627.5
ENST00000433977.5
CDS CAA 72 bp TCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCTGCTTCCTTCCGTT +
Preference number: 6 (lower is better)
Translates to: SGLMRRVQVLAS*AIMLLILLPSV
Trigger: AACGGAAGGAAGCAGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000446009.1
CDS CAA 90 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTTGGCAAGCTaGGCTATCATGTTACTGATTCGTGTGAAGTGGTTCAGACAGGCC +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQVLAS*AIMLLIRVKWFRQA
Trigger: GGCCTGTCTGAACCACTTCACACGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000468868.1
CDS CAA 90 bp AGCTCCACGGAGACCGTGAGGCAGGGAAAGTGTTTATTAGTCAGTTaGATTTTCAAAGCCCTGGCATTCTGGGCAGTCTTCAAGGCTCGA +
Preference number: 6 (lower is better)
Translates to: SSTETVRQGKCLLVS*IFKALAFWAVFKAR
Trigger: TCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAATAAACACTTTCCCTGCCTCACGGTCTCCGTGGAGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000432627.5
ENST00000433977.5
ENST00000442024.5
ENST00000446009.1
ENST00000458191.5
ENST00000468868.1
CDS TCA 72 bp TCTTCTTGGCTTTCGTGCACATCCAGATATCGCTCCTaGCCGGCTGAGGAAAAGATCAAGTCATCAGGATCT +
Preference number: 6 (lower is better)
Translates to: SSWLSCTSRYRS*PAEEKIKSSGS
Trigger: AGATCCTGATGACTTGATCTTTTCCTCAGCCGGTCAGGAGCGATATCTGGATGTGCACGAAAGCCAAGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS CCA 72 bp TGCACTTCAGCCATGTGTTCCACGTTTCTGTCCTCATaGGTGCTTTCAGAGGCTAATGGAGGATTTCCAAGA +
Preference number: 6 (lower is better)
Translates to: CTSAMCSTFLSS*VLSEANGGFPR
Trigger: TCTTGGAAATCCTCCATTAGCCTCTGAAAGCACCCATGAGGACAGAAACGTGGAACACATGGCTGAAGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5
CDS CAA 72 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCGTGTG +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQV*ASLAIMLLIRV
Trigger: CACACGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000468868.1
CDS CAA 72 bp CCCATGTTAGCCCTAAGCCATGAAATTCTTCTCTTCTaGGCTTTCGTGCACATCCAGATATCGCTCCTGACC +
Preference number: 6 (lower is better)
Translates to: PMLALSHEILLF*AFVHIQISLLT
Trigger: GGTCAGGAGCGATATCTGGATGTGCACGAAAGCCAAGAAGAGAAGAATTTCATGGCTTAGGGCTAACATGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000433977.5
CDS CAA 90 bp AGGATGAAGTTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCGTGTGAAGTGGTTC +
Preference number: 6 (lower is better)
Translates to: RMKLSLSGLMRRVQV*ASLAIMLLIRVKWF
Trigger: GAACCACTTCACACGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000258774.10
ENST00000468868.1
CDS CAA 90 bp AGGATGAAGTTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCCTAAAGCAGGGGTT +
Preference number: 6 (lower is better)
Translates to: RMKLSLSGLMRRVQV*ASLAIMLLIPKAGV
Trigger: AACCCCTGCTTTAGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000432627.5
ENST00000433977.5
CDS CAA 90 bp AGGATGAAGTTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCTGCTTCCTTCCGTT +
Preference number: 6 (lower is better)
Translates to: RMKLSLSGLMRRVQV*ASLAIMLLILLPSV
Trigger: AACGGAAGGAAGCAGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAACTTCATCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446009.1
CDS CAA 72 bp GAGACCGTGAGGCAGGGAAAGTGTTTATTAGTCAGTTaGATTTTCAAAGCCCTGGCATTCTGGGCAGTCTTC +
Preference number: 6 (lower is better)
Translates to: ETVRQGKCLLVS*IFKALAFWAVF
Trigger: GAAGACTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAATAAACACTTTCCCTGCCTCACGGTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000432627.5
ENST00000433977.5
ENST00000442024.5
ENST00000446009.1
ENST00000458191.5
ENST00000468868.1
CDS CAA 72 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCTGCTT +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQV*ASLAIMLLILL
Trigger: AAGCAGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000446009.1
CDS CAA 72 bp TTAAGCTTATCAGGGCTGATGCGGAGGGTGCAGGTTTaGGCAAGCTTGGCTATCATGTTACTGATTCCTAAA +
Preference number: 6 (lower is better)
Translates to: LSLSGLMRRVQV*ASLAIMLLIPK
Trigger: TTTAGGAATCAGTAACATGATAGCCAAGCTTGCCAAAACCTGCACCCTCCGCATCAGCCCTGATAAGCTTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000432627.5
ENST00000433977.5
CDS CCA 72 bp CACAATTTCCTAGGAATCACCTTTATGGGGATGTCATaGGTCACAATGCGGCTACTGCTTGACATAGATAAC +
Preference number: 6 (lower is better)
Translates to: HNFLGITFMGMS*VTMRLLLDIDN
Trigger: GTTATCTATGTCAAGCAGTAGCCGCATTGTGACCCATGACATCCCCATAAAGGTGATTCCTAGGAAATTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000432627.5
ENST00000433977.5
ENST00000442024.5
ENST00000446009.1
ENST00000458191.5
CDS CCA 72 bp TTATTAGTCAGTTTGATTTTCAAAGCCCTGGCATTCTaGGCAGTCTTCAAGGCTCGAGATAAGTTTTCCGAT +
Preference number: 6 (lower is better)
Translates to: LLVSLIFKALAF*AVFKARDKFSD
Trigger: ATCGGAAAACTTATCTCGAGCCTTGAAGACTGCCCAGAATGCCAGGGCTTTGAAAATCAAACTGACTAATAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000432627.5
ENST00000433977.5
ENST00000442024.5
ENST00000446009.1
ENST00000458191.5
ENST00000468868.1
CDS CCA 72 bp CCATCTTGTTATTCACAATATTGCATAAGGCCTTTGTaGGATTTACTTGTTGTCCAGCAAGAAACTGTAGGA +
Preference number: 6 (lower is better)
Translates to: PSCYSQYCIRPL*DLLVVQQETVG
Trigger: TCCTACAGTTTCTTGCTGGACAACAAGTAAATCCCACAAAGGCCTTATGCAATATTGTGAATAACAAGATGG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000258774.10
ENST00000432325.5
ENST00000458191.5