RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HUNK (Homo sapiens)

Ensembl gene IDs: ENSG00000142149

Ensembl transcript IDs: ENST00000270112.7, ENST00000430354.1, ENST00000439107.1, ENST00000465574.1

Found 492 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGCACAGCGGAATTCCGCTTTCTCACTCCTCGGCCTCCCACCGCGTaGAAGGGAAGCCTTGGGCTGTGTCCACACACCATCTTGTGCAGG +
Preference number: 1 (lower is better)
Translates to: CTAEFRFLTPRPPTA*KGSLGLCPHTILCR
Trigger: CCTGCACAAGATGGTGTGTGGACACAGCCCAAGGCTTCCCTTCCACGCGGTGGGAGGCCGAGGAGTGAGAAAGCGGAATTCCGCTGTGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR GCA 90 bp GAAGAAACTGGCCTGTATCTGAACAGGTTCTCTGCCAGGCAAGCCTaGTCCCAGCTCCCAGCAAACTCGCCGAGCTCTGAGCCGCACCAG +
Preference number: 1 (lower is better)
Translates to: EETGLYLNRFSARQA*SQLPANSPSSEPHQ
Trigger: CTGGTGCGGCTCAGAGCTCGGCGAGTTTGCTGGGAGCTGGGAGCAGGCTTGCCTGGCAGAGAACCTGTTCAGATACAGGCCAGTTTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp CTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCTGTaGATTCAGCTACAGGTGGGACTAAGGATGCTCCACGCGAGGCCT +
Preference number: 1 (lower is better)
Translates to: LGVPKRGWVVQALGL*IQLQVGLRMLHARP
Trigger: AGGCCTCGCGTGGAGCATCCTTAGTCCCACCTGTAGCTGAATCCACAGACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp GGACCAGGTATCAAGCAAGTTCATGTCTTGCTGTCTCACACTTCGTaGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACACAAAGCGCAG +
Preference number: 1 (lower is better)
Translates to: GPGIKQVHVLLSHTS*SGEAGHAAQAHKAQ
Trigger: CTGCGCTTTGTGTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAAGACATGAACTTGCTTGATACCTGGTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CCA 90 bp ACCCTCCTAGCGATTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTaGGTTGTGCAGGCTTTGGGTCTGTGGATTCAGCTACAGGTGGGA +
Preference number: 1 (lower is better)
Translates to: TLLAIPASLGVPKRG*VVQALGLWIQLQVG
Trigger: TCCCACCTGTAGCTGAATCCACAGACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAATCGCTAGGAGGGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp ATTGACACCACATGTGTGGGGATCCAGGTCACACCATGGAAGATGTaGAGAGTCCCTGGCCTTGGAGTGACCCCATTCACTTGGCCGGCG +
Preference number: 1 (lower is better)
Translates to: IDTTCVGIQVTPWKM*RVPGLGVTPFTWPA
Trigger: CGCCGGCCAAGTGAATGGGGTCACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACACATGTGGTGTCAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR TCA 90 bp TGGGCTGTGTCCACACACCATCTTGTGCAGGTCCTAGCAGGCTCCTaGGCCAGGCCAGGGGGTACTTATTTCAAGATCTGGAAGAGCAGT +
Preference number: 1 (lower is better)
Translates to: WAVSTHHLVQVLAGS*ARPGGTYFKIWKSS
Trigger: ACTGCTCTTCCAGATCTTGAAATAAGTACCCCCTGGCCTGGCTCAGGAGCCTGCTAGGACCTGCACAAGATGGTGTGTGGACACAGCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR GCA 90 bp TCAGCTACAGGTGGGACTAAGGATGCTCCACGCGAGGCCTTGGAGTaGTCACACCCTGACAGATGTGTGGAGCTCTGTTCAGTTGCTGTT +
Preference number: 1 (lower is better)
Translates to: SATGGTKDAPREALE*SHPDRCVELCSVAV
Trigger: AACAGCAACTGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCATCCTTAGTCCCACCTGTAGCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp TGGATTCAGCTACAGGTGGGACTAAGGATGCTCCACGCGAGGCCTTaGAGTGCTCACACCCTGACAGATGTGTGGAGCTCTGTTCAGTTG +
Preference number: 1 (lower is better)
Translates to: WIQLQVGLRMLHARP*SAHTLTDVWSSVQL
Trigger: CAACTGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCATCCTTAGTCCCACCTGTAGCTGAATCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 90 bp TGCATCAGGGGTTCCAGCAAGTTCCCAATGCGCAGGTATACACCCTaGAAGCCTGCAAAGTGGAGCCGTTGCAGCTGGAAACCGTCTTTA +
Preference number: 1 (lower is better)
Translates to: CIRGSSKFPMRRYTP*KPAKWSRCSWKPSL
Trigger: TAAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCGCATTGGGAACTTGCTGGAACCCCTGATGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 90 bp GGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTaGTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGG +
Preference number: 1 (lower is better)
Translates to: GSHSLISLCSLREKL*SRPAQMPAHLGTLG
Trigger: CCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp ATGCTCCACGCGAGGCCTTGGAGTGCTCACACCCTGACAGATGTGTaGAGCTCTGTTCAGTTGCTGTTTTCTAGAGATACCCCAAACCCC +
Preference number: 1 (lower is better)
Translates to: MLHARPWSAHTLTDV*SSVQLLFSRDTPNP
Trigger: GGGGTTTGGGGTATCTCTAGAAAACAGCAACTGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 90 bp GGGTTCCAGCAAGTTCCCAATGCGCAGGTATACACCCTGCAAGCCTaGAAAGTGGAGCCGTTGCAGCTGGAAACCGTCTTTAGAAAAGGT +
Preference number: 1 (lower is better)
Translates to: GFQQVPNAQVYTLQA*KVEPLQLETVFRKG
Trigger: ACCTTTTCTAAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCGCATTGGGAACTTGCTGGAACCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 90 bp ACCAGCTGTAACCGTGTTCTATGCCTTCCAGAAGGATCAGGGCTATaGCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCCCT +
Preference number: 1 (lower is better)
Translates to: TSCNRVLCLPEGSGL*LKQQDEHRATETCP
Trigger: AGGGCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCCTTCTGGAAGGCATAGAACACGGTTACAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp AACTCTGCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTaGGGTGTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCA +
Preference number: 1 (lower is better)
Translates to: NSAPDQLKCQLIWGL*GVLKPSGSLVFPSS
Trigger: TGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGCAGAGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp TCTCCTTCAGTCTTTCTCTTCTGTTGGGGTCCCCACTGTTTGGTTTaGTCTTGGTCCGAAGCTCCTCTCCATCTTCCTCTGAGGATCCTG +
Preference number: 1 (lower is better)
Translates to: SPSVFLFCWGPHCLV*SWSEAPLHLPLRIL
Trigger: CAGGATCCTCAGAGGAAGATGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACTGAAGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp AGCAAGTTCCCAATGCGCAGGTATACACCCTGCAAGCCTGCAAAGTaGAGCCGTTGCAGCTGGAAACCGTCTTTAGAAAAGGTACACTTC +
Preference number: 1 (lower is better)
Translates to: SKFPMRRYTPCKPAK*SRCSWKPSLEKVHF
Trigger: GAAGTGTACCTTTTCTAAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCGCATTGGGAACTTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp AATTCTAGATTTGTGTTTTGGGATCCTTGGACTGAGATGACTATCTaGGGTGGCCACAGAGGTGGTCTCTGGTCACACCTGCACCGGTCA +
Preference number: 1 (lower is better)
Translates to: NSRFVFWDPWTEMTI*GGHRGGLWSHLHRS
Trigger: TGACCGGTGCAGGTGTGACCAGAGACCACCTCTGTGGCCACCTCAGATAGTCATCTCAGTCCAAGGATCCCAAAACACAAATCTAGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp GGCTTTGCAATTCTAGATTTGTGTTTTGGGATCCTTGGACTGAGATaGCTATCTGAGGTGGCCACAGAGGTGGTCTCTGGTCACACCTGC +
Preference number: 1 (lower is better)
Translates to: GFAILDLCFGILGLR*LSEVATEVVSGHTC
Trigger: GCAGGTGTGACCAGAGACCACCTCTGTGGCCACCTCAGATAGTCATCTCAGTCCAAGGATCCCAAAACACAAATCTAGAATTGCAAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp TTTCTGATTCTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTaGATACAGTCAGACAACACGGCTGTCCACAAAACACACACAGGG +
Preference number: 1 (lower is better)
Translates to: FLILLTNDCTLSSAS*IQSDNTAVHKTHTG
Trigger: CCCTGTGTGTGTTTTGTGGACAGCCGTGTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAGAATCAGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp TTTCAAGATCTGGAAGAGCAGTCTGTAGTTGAGTCCTGTGAACAATaGCAGGATGTCCTTTCAAGATGCCCGGTGACAAGGGCCTCCATC +
Preference number: 1 (lower is better)
Translates to: FQDLEEQSVVESCEQ*QDVLSRCPVTRASI
Trigger: GATGGAGGCCCTTGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACAGGACTCAACTACAGACTGCTCTTCCAGATCTTGAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR TCA 90 bp CCAACCTGTGCTGATGGGTCTTCTTTTTCTGATTCTTCTCACCAATaGCTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAC +
Preference number: 1 (lower is better)
Translates to: PTCADGSSFSDSSHQ*LHPVKCQLDTVRQH
Trigger: GTGTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAGAATCAGAAAAAGAAGACCCATCAGCACAGGTTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp AATGCCTCATTATTGGAACACCACCAGCTCAGATGTGGATACATGTaGAGGGGGACTGCAAATCCTGAAATGCTCCTCACCTTCTCTTCC +
Preference number: 1 (lower is better)
Translates to: NASLLEHHQLRCGYM*RGTANPEMLLTFSS
Trigger: GGAAGAGAAGGTGAGGAGCATTTCAGGATTTGCAGTCCCCCTCCACATGTATCCACATCTGAGCTGGTGGTGTTCCAATAATGAGGCATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp ATTTCTGTCAGTAACTACAGGGTGACTGGAATCACAGGCACAGACTaGGGAAGACAGTCACGGTCGAACAGACAACATGCTTCGGACTTA +
Preference number: 1 (lower is better)
Translates to: ISVSNYRVTGITGTD*GRQSRSNRQHASDL
Trigger: TAAGTCCGAAGCATGTTGTCTGTTCGACCGTGACTGTCTTCCTCAGTCTGTGCCTGTGATTCCAGTCACCCTGTAGTTACTGACAGAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp ATAACAAGGCTATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTaGGAAAGACAGAGTTCCCAAAGAAAGCTGTCTTTCCCCAGCTTC +
Preference number: 1 (lower is better)
Translates to: ITRLSRGLLLTWEVN*ERQSSQRKLSFPSF
Trigger: GAAGCTGGGGAAAGACAGCTTTCTTTGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGATAGCCTTGTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp CACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAACGTaGACTGAACCCTGTTTGAGGAGCTTGGCTTTCCTCGAAGAAGAA +
Preference number: 1 (lower is better)
Translates to: HIFGSILGERCENTT*TEPCLRSLAFLEEE
Trigger: TTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAGGGTTCAGTCCACGTTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp AGTGGATGGGACAAACAGCATAAGGTTCAGGAAGCTGCACAGTTTTaGAAAGGACTTAAAAATGCAAGACCTAGTCCCTGCAGGAACTTC +
Preference number: 1 (lower is better)
Translates to: SGWDKQHKVQEAAQF*KGLKNARPSPCRNF
Trigger: GAAGTTCCTGCAGGGACTAGGTCTTGCATTTTTAAGTCCTTTTCAAAACTGTGCAGCTTCCTGAACCTTATGCTGTTTGTCCCATCCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 90 bp CCAAGGCCTCCTACAAGGACAAAATCTAGAAGTCACGTTCATAACTaGCATTCTTTGTGTGCCATTTTCAGAGTCTCCAAGGAAGATCCT +
Preference number: 1 (lower is better)
Translates to: PRPPTRTKSRSHVHN*HSLCAIFRVSKEDP
Trigger: AGGATCTTCCTTGGAGACTCTGAAAATGGCACACAAAGAATGGCAGTTATGAACGTGACTTCTAGATTTTGTCCTTGTAGGAGGCCTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp TCAGAGTCTCCAAGGAAGATCCTAATATCCCCAAATGAAAAAGGTTaGTTCTTCTTGAACTGCCACCTGCAGTGTGTATGTCAGAAAGAC +
Preference number: 1 (lower is better)
Translates to: SESPRKILISPNEKG*FFLNCHLQCVCQKD
Trigger: GTCTTTCTGACATACACACTGCAGGTGGCAGTTCAAGAAGAATCAACCTTTTTCATTTGGGGATATTAGGATCTTCCTTGGAGACTCTGA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp TTGAAAAGTGATGACATGAAATTGAACCAACTCCCAGTACCGCTCTaGATTATTCTTACTGTGCCTGTAGCTCACAGAAGACCCCACAAA +
Preference number: 1 (lower is better)
Translates to: LKSDDMKLNQLPVPL*IILTVPVAHRRPHK
Trigger: TTTGTGGGGTCTTCTGTGAGCTACAGGCACAGTAAGAATAATTCAGAGCGGTACTGGGAGTTGGTTCAATTTCATGTCATCACTTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 90 bp GAATCTAACATTTCTCCTTTCACTCGGTTTCATAGATTTGTCAGGTaGTCACACACACACACACACACAAATACAGCTGATCCCCTTTCA +
Preference number: 1 (lower is better)
Translates to: ESNISPFTRFHRFVR*SHTHTHTNTADPLS
Trigger: TGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTGAGCACCTGACAAATCTATGAAACCGAGTGAAAGGAGAAATGTTAGATTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp ATCCTCAAGTTTGCTCCACATAAAGCTATTCTATCCTTCCAAAATTaGTTGCCCCAAATGCCTCATTATTGGAACACCACCAGCTCAGAT +
Preference number: 1 (lower is better)
Translates to: ILKFAPHKAILSFQN*LPQMPHYWNTTSSD
Trigger: ATCTGAGCTGGTGGTGTTCCAATAATGAGGCATTTGGGGCAACCAATTTTGGAAGGATAGAATAGCTTTATGTGGAGCAAACTTGAGGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 90 bp ATATATGAAAAACGTTTTGTGAACAGTTATGAAGGAAGCAGTAACTaGGACAATTTCAAGAGGTCATCTAGATCCCACCCTCCCATTCCA +
Preference number: 1 (lower is better)
Translates to: IYEKRFVNSYEGSSN*DNFKRSSRSHPPIP
Trigger: TGGAATGGGAGGGTGGGATCTAGATGACCTCTTGAAATTGTCCCAGTTACTGCTTCCTTCATAACTGTTCACAAAACGTTTTTCATATAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 90 bp CAGCTTCCTGTGCCATCTTTAAGTTTTAAACCACTCAACTCCAATTaGTCCTCAAGTTTGCTCCACATAAAGCTATTCTATCCTTCCAAA +
Preference number: 1 (lower is better)
Translates to: QLPVPSLSFKPLNSN*SSSLLHIKLFYPSK
Trigger: TTTGGAAGGATAGAATAGCTTTATGTGGAGCAAACTTGAGGATCAATTGGAGTTGAGTGGTTTAAAACTTAAAGATGGCACAGGAAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp TCCGCTTTCTCACTCCTCGGCCTCCCACCGCGTGGAAGGGAAGCCTaGGGCTGTGTCCACACACCATCTTGTGCAGGTCCTAGCAGGCTC +
Preference number: 2 (lower is better)
Translates to: SAFSLLGLPPRGREA*GCVHTPSCAGPSRL
Trigger: GAGCCTGCTAGGACCTGCACAAGATGGTGTGTGGACACAGCCCAAGGCTTCCCTTCCACGCGGTGGGAGGCCGAGGAGTGAGAAAGCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR GCA 90 bp CTGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATATCGGTCAGCTCCCCTaGACAGCGGAATTCCGCTTT +
Preference number: 2 (lower is better)
Translates to: LDTWGCCVLQLRVRGTRYIGQLP*TAEFRF
Trigger: AAAGCGGAATTCCGCTGTGCAGGGGAGCTGACCGAT...ATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR GCA 90 bp GGAATTCCGCTTTCTCACTCCTCGGCCTCCCACCGCGTGGAAGGGAAGCCTTGGGATGTCCTTTCAAGATaGCCGGTGACAAGGGCCTCC +
Preference number: 2 (lower is better)
Translates to: GIPLSHSSASHRVEGKPWDVLSR*PVTRAS
Trigger: GGAGGCCCTTGTCACCGGGCATCTTGAAAGGACATC...CCAAGGCTTCCCTTCCACGCGGTGGGAGGCCGAGGAGTGAGAAAGCGGAATTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR CCA 90 bp CTCTGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCCAGGTCACACCATaGAAGATGTGGAGAGTCCCT +
Preference number: 2 (lower is better)
Translates to: LWTRGDAACSSCVSGGPGIQVTP*KMWRVP
Trigger: AGGGACTCTCCACATCTTCCATGGTGTGACCTGGAT...ACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR CCA 90 bp CTCCAGCTGCGTGTCAGGGGGACCAGGTATCAAGCAAGTTCATGTCTTGCTGTCTCACACTTCGTGGAGTaGGGAGGCGGGGCATGCGGC +
Preference number: 2 (lower is better)
Translates to: LQLRVRGTRYQASSCLAVSHFVE*GGGACG
Trigger: GCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGA...GACAGCAAGACATGAACTTGCTTGATACCTGGTCCCCCTGACACGCAGCTGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CAA 90 bp CCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTaGGGTCTGTGGATTCAGCTACAGGTGGGACTAAGGATGCTCCAC +
Preference number: 2 (lower is better)
Translates to: PASLGVPKRGWVVQA*GLWIQLQVGLRMLH
Trigger: GTGGAGCATCCTTAGTCCCACCTGTAGCTGAATCCACAGACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGGAGTGCTCACACCCTaGCAGATGTGTGGAGCTCTG +
Preference number: 2 (lower is better)
Translates to: INLSSESRSPMATRSVSGGVLTP*QMCGAL
Trigger: CAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGCCCTAGAGCCGTGGTaGTCCCCTAGGGAAGAAACA +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKALEPW*SPREET
Trigger: TGTTTCTTCCCTAGGGGATCACCACGGCTCTAGGGC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATCGCGAGGCCTTGGAGTaGTCACACCCTGACAGATGT +
Preference number: 2 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDREALE*SHPDRC
Trigger: ACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCG...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp GTGGATTCAGCTACAGGTGGGACTAAGGATGCTCCACGCGAGGCCTaGGAGTGCTCACACCCTGACAGATGTGTGGAGCTCTGTTCAGTT +
Preference number: 2 (lower is better)
Translates to: VDSATGGTKDAPREA*ECSHPDRCVELCSV
Trigger: AACTGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCATCCTTAGTCCCACCTGTAGCTGAATCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp CAGCAAACTCGCCGAGCTCTGAGCCGCACCAGTTCTGTGGGCAGCTaGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCT +
Preference number: 2 (lower is better)
Translates to: QQTRRALSRTSSVGS*KSASHRDNAAFSPS
Trigger: AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGCTCGGCGAGTTTGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATCAGAACTGCCTCTCTaGCTTCTGGCAAGGCTGCCT +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKSELPL*LLARLP
Trigger: AGGCAGCCTTGCCAGAAGGCAGAGAGGCAGTTCTGA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ACAGCGGAATTCCGCTTTCTCACTCCTCGGCCTCCCACCGCGTGGAAGGGAAGCGAGTCCTGTGAACAATaGCAGGATGTCCTTTCAAGA +
Preference number: 2 (lower is better)
Translates to: TAEFRFLTPRPPTAWKGSESCEQ*QDVLSR
Trigger: TCTTGAAAGGACATCCTGCCATTGTTCACAGGACTC...GCTTCCCTTCCACGCGGTGGGAGGCCGAGGAGTGAGAAAGCGGAATTCCGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CAA 90 bp CGCCAATGGCAACGCGGTCAGTTAGCGGCACATGTGCAGCTGTTCTaGAAGCCTGCCAGGAATAAGAAGCACGTTCTCCACAAGCTAACG +
Preference number: 2 (lower is better)
Translates to: RQWQRGQLAAHVQLF*KPARNKKHVLHKLT
Trigger: CGTTAGCTTGTGGAGAACGTGCTTCTTATTCCTGGCAGGCTTCAAGAACAGCTGCACATGTGCCGCTAACTGACCGCGTTGCCATTGGCG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAAACTCGCCGAGCTCTaGGCCGCACCAGTTCTGTGG +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQKLAEL*AAPVLW
Trigger: CCACAGAACTGGTGCGGCTCAGAGCTCGGCGAGTTT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCCCTGCCCCCGGCTCCTaGTGGCCTTCAGGTAATCCC +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSPAPGS*WPSGNP
Trigger: GGGATTACCTGAAGGCCAGCAGGAGCCGGGGGCAGG...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTCTGCCAGGCAAGCCTaGTCCCAGCTCCCAGCAAAC +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQSARQA*SQLPAN
Trigger: GTTTGCTGGGAGCTGGGAGCAGGCTTGCCTGGCAGA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAACAGGCTTTGGGTCTGTaGATTCAGCTACAGGTGGGA +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKQALGL*IQLQVG
Trigger: TCCCACCTGTAGCTGAATCCACAGACCCAAAGCCTG...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGGGTTGTGCAGGCTTTaGGTCTGTGGATTCAGCTAC +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKGLCRL*VCGFSY
Trigger: GTAGCTGAATCCACAGACCCAAAGCCTGCACAACCC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCCGATTCCAGCATCTCTaGGGGTCCCTAAGCGAGGTT +
Preference number: 2 (lower is better)
Translates to: GSGLCLKQQDEHRATETCRFQHL*GSLSEV
Trigger: AACCTCGCTTAGGGACCCCCAGAGATGCTGGAATCG...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGGGGTCCCCACTGTTTaGTTTGATCTTGGTCCGAAG +
Preference number: 2 (lower is better)
Translates to: INLSSESRSPMATRSVSGGVPTV*FDLGPK
Trigger: CTTCGGACCAAGATCAAACCAAACAGTGGGGACCCC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTAGGTGGCCACAGAGGTaGTCTCTGGTCACACCTGCA +
Preference number: 2 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSRWPQR*SLVTPA
Trigger: TGCAGGTGTGACCAGAGACCACCTCTGTGGCCACCT...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCCCCCACTGTTTGGTTTaGTCTTGGTCCGAAGCTCCT +
Preference number: 2 (lower is better)
Translates to: GSGLCLKQQDEHRATETCPHCLV*SWSEAP
Trigger: AGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGG...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGATTCTTCTCACCAATaGCTGCACCCTGTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKDSSHQ*LHPVKC
Trigger: GCACTTGACAGGGTGCAGTCATTGGTGAGAAGAATC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATTATGAAAGGCAGGGCTaGTACACTCCGCAGAGGAAA +
Preference number: 2 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDYERQG*YTPQRK
Trigger: TTTCCTCTGCGGAGTGTAGCAGCCCTGCCTTTCATA...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTCTGAACAGGTTCTCTaGCAGGCAAGCCTGCTCCCA +
Preference number: 2 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSSEQVL*QASLLP
Trigger: TGGGAGCAGGCTTGCCTGGCAGAGAACCTGTTCAGA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCGCAGGTATACACCCTaGAAGCCTGCAAAGTGGAGC +
Preference number: 2 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLRRYTP*KPAKWS
Trigger: GCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCACTCCACGCGAGGCCTTaGAGTGCTCACACCCTGACA +
Preference number: 2 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPLHARP*SAHTLT
Trigger: TGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAG...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCGTCCCTAAGCGAGGTTaGGTTGTGCAGGCTTTGGGT +
Preference number: 2 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTVPKRG*VVQALG
Trigger: ACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGAC...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGCCCCCGGCTCCTGCTaGCCTTCAGGTAATCCCTGC +
Preference number: 2 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRAPGSC*PSGNPC
Trigger: GCAGGGATTACCTGAAGGCCAGCAGGAGCCGGGGGC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACACAGAGGTGGTCTCTaGTCACACCTGCACCGGTCA +
Preference number: 2 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSHRGGL*SHLHRS
Trigger: TGACCGGTGCAGGTGTGACCAGAGACCACCTCTGTG...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp TTCAGTCTTTCTCTTCTGTTGGGGTCCCCACTGTTTGGTTTGATCTaGGTCCGAAGCTCCTCTCCATCTTCCTCTGAGGATCCTGGGCCT +
Preference number: 2 (lower is better)
Translates to: FSLSLLLGSPLFGLI*VRSSSPSSSEDPGP
Trigger: AGGCCCAGGATCCTCAGAGGAAGATGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACTGAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp TCCCCCTCTGACCATGGCAGCCACTCTCTGATTTCTCTGTGTTCTTaGAGGGAGAAACTCTGCTCCAGACCAGCTCAAATGCCAGCTCAT +
Preference number: 2 (lower is better)
Translates to: SPSDHGSHSLISLCS*REKLCSRPAQMPAH
Trigger: ATGAGCTGGCATTTGAGCTGGTCTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCATGGTCAGAGGGGGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGGCACCGGTCAAAAGTTaGAGACTCCAGGCCATTCTG +
Preference number: 2 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLAPVKS*RLQAIL
Trigger: CAGAATGGCCTGGAGTCTTCAACTTTTGACCGGTGC...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAGCGAGGTTGGGTTGTaGAGGCTTTGGGTCTGTGGA +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQSEVGL*RLWVCG
Trigger: TCCACAGACCCAAAGCCTGCACAACCCAACCTCGCT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCTGCACCCTGTCAAGTaGCAGCTGGATACAGTCAGA +
Preference number: 2 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLLHPVK*QLDTVR
Trigger: TCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGTCTTTCTCTTCTGTTaGGGTCCCCACTGTTTGGTT +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKVFLFC*GPHCLV
Trigger: AACCAAACAGTGGGGACCCCAACAGAAGAGAAAGAC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp GCGTGTCAGGGGGACCAGGTATCAAGCAAGTTCATGTCTTGCTGTCTCACACTTACACCATGGAAGATGTaGAGAGTCCCTGGCCTTGGA +
Preference number: 2 (lower is better)
Translates to: ACQGDQVSSKFMSCCLTLTPWKM*RVPGLG
Trigger: TCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGT...AAGTGTGAGACAGCAAGACATGAACTTGCTTGATACCTGGTCCCCCTGACACGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CAA 90 bp GTCTCCTTCAGTCTTTCTCTTCTGTTGGGGTCCCCACTGTTTGGTTaGATCTTGGTCCGAAGCTCCTCTCCATCTTCCTCTGAGGATCCT +
Preference number: 2 (lower is better)
Translates to: VSFSLSLLLGSPLFG*ILVRSSSPSSSEDP
Trigger: AGGATCCTCAGAGGAAGATGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACTGAAGGAGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTTGGGATCCTTGGACTaGGATGACTATCTGAGGTGG +
Preference number: 2 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSLGSLD*DDYLRW
Trigger: CCACCTCAGATAGTCATCTCAGTCCAAGGATCCCAA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGTCACCACTGGTGAATaGGAGAATGATTCAGAACTG +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKVTTGE*ENDSEL
Trigger: CAGTTCTGAATCATTCTCTCATTCACCAGTGGTGAC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGGCTCTGTCAGAGATGTaGGGGACTGAAGGATGTCAC +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQALSEM*GTEGCH
Trigger: GTGACATCCTTCAGTCCCTCACATCTCTGACAGAGC...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCGTAACTGTGGCCAACTaGTGTGAGAGGCACACATGT +
Preference number: 2 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTVTVAN*CERHTC
Trigger: ACATGTGTGCCTCTCACAGCAGTTGGCCACAGTTAC...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGCCTTCAGGTAATCCCTaGTATGAAAGGCAGGGCTGC +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQPSGNP*YERQGC
Trigger: GCAGCCCTGCCTTTCATAGCAGGGATTACCTGAAGG...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCCACCTAAGCTGGAGTaGAGTAGCATGATCTTGGCT +
Preference number: 2 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLPPKLE*SSMILA
Trigger: AGCCAAGATCATGCTACTGCACTCCAGCTTAGGTGG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGAGGCGGAAGTACCCCTaGTCTCAAGGAAAATGCATC +
Preference number: 2 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLRRKYP*SQGKCI
Trigger: GATGCATTTTCCTTGAGAGCAGGGGTACTTCCGCCT...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCAGATGACTATCTGAGGTaGCCACAGAGGTGGTCTCTG +
Preference number: 2 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSDDYLR*PQRWSL
Trigger: CAGAGACCACCTCTGTGGCCACCTCAGATAGTCATC...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAAGTCCCCGAAGTAGCTaGGACTACAGGCACGTACCA +
Preference number: 2 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPSPRSS*DYRHVP
Trigger: TGGTACGTGCCTGTAGTCCCAGCTACTTCGGGGACT...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGAAACACAACGTGGACTaGACCCTGTTTGAGGAGCTT +
Preference number: 2 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLKHNVD*TLFEEL
Trigger: AAGCTCCTCAAACAGGGTTCAGTCCACGTTGTGTTT...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAAGGTTGAGGCTGCAGTaGACTGTGATTGTGCCACTG +
Preference number: 2 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPRLRLQ*TVIVPL
Trigger: CAGTGGCACAATCACAGTTCACTGCAGCCTCAACCT...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTTGGAGCCCAGGAGTTTaGGATCAGCCTGAGCAACAT +
Preference number: 2 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSWSPGV*DQPEQH
Trigger: ATGTTGCTCAGGCTGATCTCAAACTCCTGGGCTCCA...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAAACTGGCCCAGAAAATaGCCCCCAATGCAATTCCCG +
Preference number: 2 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPNWPRK*PPMQFP
Trigger: CGGGAATTGCATTGGGGGGCATTTTCTGGGCCAGTT...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAACTGCCATTCTTTGTGTaGCATTTTCAGAGTCTCCAA +
Preference number: 2 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKLPFFV*HFQSLQ
Trigger: TTGGAGACTCTGAAAATGGCACACAAAGAATGGCAG...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGAGTCCAGGTCGCCAATaGCAACGCGGTCAGTTAGCG +
Preference number: 2 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRSPGRQ*QRGQLA
Trigger: CGCTAACTGACCGCGTTGCCATTGGCGACCTGGACT...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGGCTTGATCTGTTGTTaGCATCCCCCTCTGACCATG +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSGLICC*HPPLTM
Trigger: CATGGTCAGAGGGGGATGTCAACAACAGATCAAGCC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp GCGTGTCAGGGGGACCAGGTATCAAGCAAGTTCATGTCTTGCTGTCTCACACTTGAGCAATGTTTTGATTaGCACCACATGTGTGGGGAT +
Preference number: 2 (lower is better)
Translates to: ACQGDQVSSKFMSCCLTLEQCFD*HHMCGD
Trigger: ATCCCCACACATGTGGTGTCAATCAAAACATTGCTC...AAGTGTGAGACAGCAAGACATGAACTTGCTTGATACCTGGTCCCCCTGACACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTGTAACCGTGTTCTATaGCTTCCAGAAGGATCAGGG +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQCNRVL*LPEGSG
Trigger: CCCTGATCCTTCTGGAAGGCATAGAACACGGTTACA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTAGAATGATTCAGAACTaGCTCTCTGCCTTCTGGCAA +
Preference number: 2 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSRMIQN*LSAFWQ
Trigger: TTGCCAGAAGGCAGAGAGGCAGTTCTGAATCATTCT...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTGCTCTCAAGGAAAATaGATCAGGGGTTCCAGCAAG +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQCSQGK*IRGSSK
Trigger: CTTGCTGGAACCCCTGATGCATTTTCCTTGAGAGCA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCCTGAATGATAGGAATTaGCTGCCCCTGGAGCCAACC +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSLNDRN*LPLEPT
Trigger: GGTTGGCTCCAGGGGCAGCCAATTCCTATCATTCAG...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAGGCCATTCTGTAACTaGTCTCCTACACTAACCCCT +
Preference number: 2 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQRPFCN*SPTLTP
Trigger: AGGGGTTAGTGTAGGAGACCAGTTACAGAATGGCCT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp AATCTTGCTTGGGAAATGAGTGTCTCCTTCAGTCTTTCTCTTCTGTaGGGGTCCCCACTGTTTGGTTTGATCTTGGTCCGAAGCTCCTCT +
Preference number: 2 (lower is better)
Translates to: NLAWEMSVSFSLSLL*GSPLFGLILVRSSS
Trigger: AGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACTGAAGGAGACACTCATTTCCCAAGCAAGATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp GAAAGGTGTGAAAACACAACGTGGACTGAACCCTGTTTGAGGAGCTaGGCTTTCCTCGAAGAAGAAACTGGCCTGTATCTGAACAGGTTC +
Preference number: 2 (lower is better)
Translates to: ERCENTTWTEPCLRS*AFLEEETGLYLNRF
Trigger: GAACCTGTTCAGATACAGGCCAGTTTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAGGGTTCAGTCCACGTTGTGTTTTCACACCTTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp ATCCTTGGAGAAAGGTGTGAAAACACAACGTGGACTGAACCCTGTTaGAGGAGCTTGGCTTTCCTCGAAGAAGAAACTGGCCTGTATCTG +
Preference number: 2 (lower is better)
Translates to: ILGERCENTTWTEPC*RSLAFLEEETGLYL
Trigger: CAGATACAGGCCAGTTTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAGGGTTCAGTCCACGTTGTGTTTTCACACCTTTCTCCAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGTTCTGTGGGCAGCTTaGAATCAGCATCGCACAGAG +
Preference number: 2 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRVLWAA*NQHRTE
Trigger: CTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAAC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAAATGGCCAAGGGGTCTaGCCTCATCCTAGAATGCCC +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPNGQGV*PHPRMP
Trigger: GGGCATTCTAGGATGAGGTCAGACCCCTTGGCCATT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGTTGTGATGACGGCTTaGTCTGTTGTTGACATCCCC +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSVVMTA*SVVDIP
Trigger: GGGGATGTCAACAACAGATCAAGCCGTCATCACAAC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAATGATAGGAATTGGCTaGCCCTGGAGCCAACCCTCC +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPMIGIG*PWSQPS
Trigger: GGAGGGTTGGCTCCAGGGGCAGCCAATTCCTATCAT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTGAAGGATCAGGGCTATaGCTTAAACAACAGGATGAA +
Preference number: 2 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSEGSGL*LKQQDE
Trigger: TTCATCCTGTTGTTTAAGGCATAGCCCTGATCCTTC...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTGGAGCTCTGTTCAGTTaGTGTTTTCTAGAGATACCC +
Preference number: 2 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSGALFS*CFLEIP
Trigger: GGGTATCTCTAGAAAACAGCAACTGAACAGAGCTCC...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGGGTTGGTGAGTACTTaGGAGGAAGGAAGATCTGAA +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSGLVST*EEGRSE
Trigger: TTCAGATCTTCCTTCCTCCCAAGTACTCACCAACCC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCACCTCGAAGAAGAAACTaGCCTGTATCTGAACAGGTT +
Preference number: 2 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPPRRRN*PVSEQV
Trigger: AACCTGTTCAGATACAGGCCAGTTTCTTCTTCGAGG...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCTCTAGATTTGTGTTTTaGGATCCTTGGACTGAGATG +
Preference number: 2 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTSRFVF*DPWTEM
Trigger: CATCTCAGTCCAAGGATCCCAAAACACAAATCTAGA...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACGACTACTGGGGCTTTaGACAGTGAACAGTGAGCTT +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPRLLGL*TVNSEL
Trigger: AAGCTCACTGTTCACTGTGCAAAGCCCCAGTAGTCG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCTATCCAGGGGTTTGCTaGTTACTTGGGAAGTCAACT +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSYPGVC*LLGKST
Trigger: AGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGATA...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCTGTGAAAACACAACGTaGACTGAACCCTGTTTGAGG +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSCENTT*TEPCLR
Trigger: CCTCAAACAGGGTTCAGTCCACGTTGTGTTTTCACA...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACTCATCTGGGGACTCTaGGGTGTCCTTAAACCATCT +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPLIWGL*GVLKPS
Trigger: AGATGGTTTAAGGACACCCCAGAGTCCCCAGATGAG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCATCTTGCTTGGGAAATaGGTGTCTCCTTCAGTCTTT +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSILLGK*VSPSVF
Trigger: AAAGACTGAAGGAGACACTCATTTCCCAAGCAAGAT...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTTCGCCATCTGAGTTATaGTCTGAATTGTCACAATCA +
Preference number: 2 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSSPSEL*SELSQS
Trigger: TGATTGTGACAATTCAGAGCATAACTCAGATGGCGA...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAGTCGAACAGACAACATaGTTCGGACTTACCAAAGGG +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPVEQTT*FGLTKG
Trigger: CCCTTTGGTAAGTCCGAAGCATGTTGTCTGTTCGAC...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp ATACCTAAAGTAGATAACAAGGCTATCCAGGGGTTTGCTGCTTACTaGGGAAGTCAACTGAGAAAGACAGAGTTCCCAAAGAAAGCTGTC +
Preference number: 2 (lower is better)
Translates to: IPKVDNKAIQGFAAY*GSQLRKTEFPKKAV
Trigger: GACAGCTTTCTTTGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGATAGCCTTGTTATCTACTTTAGGTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCCCAAATGAAAAAGGTTaGTTCTTCTTGAACTGCCAC +
Preference number: 2 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSPNEKG*FFLNCH
Trigger: GTGGCAGTTCAAGAAGAATCAACCTTTTTCATTTGG...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAAGCTTCAAGAGTGGATaGGACAAACAGCATAAGGTT +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPSFKSG*DKQHKV
Trigger: AACCTTATGCTGTTTGTCCCATCCACTCTTGAAGCT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR GCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAAGTCACGTTCATAACTaGCATTCTTTGTGTGCCATT +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPSHVHN*HSLCAI
Trigger: AATGGCACACAAAGAATGGCAGTTATGAACGTGACT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCATATCAAAATCTTGCTTaGGAAATGAGTGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPYQNLA*EMSVSF
Trigger: GAAGGAGACACTCATTTCCCAAGCAAGATTTTGATA...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 90 bp ATAATAAAGAATCTAACATTTCTCCTTTCACTCGGTTTCATAGATTaGTCAGGTGCTCACACACACACACACACACAAATACAGCTGATC +
Preference number: 2 (lower is better)
Translates to: IIKNLTFLLSLGFID*SGAHTHTHTQIQLI
Trigger: GATCAGCTGTATTTGTGTGTGTGTGTGTGTGTGAGCACCTGACAAATCTATGAAACCGAGTGAAAGGAGAAATGTTAGATTCTTTATTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp GAATTCCGCTTTCTCACTCCTCGGCCTCCCACCGCGTaGAAGGGAAGCCTTGGGCTGTGTCCACACACCATC +
Preference number: 3 (lower is better)
Translates to: EFRFLTPRPPTA*KGSLGLCPHTI
Trigger: GATGGTGTGTGGACACAGCCCAAGGCTTCCCTTCCACGCGGTGGGAGGCCGAGGAGTGAGAAAGCGGAATTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CCA 72 bp GATCCAGGTCACACCATGGAAGATGTGGAGAGTCCCTaGCCTTGGAGTGACCCCATTCACTTGGCCGGCGTC +
Preference number: 3 (lower is better)
Translates to: DPGHTMEDVESP*PWSDPIHLAGV
Trigger: GACGCCGGCCAAGTGAATGGGGTCACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR CAA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCAGGGCCACCGAGACTaGCCCTGCCTGTGGGCCACA +
Preference number: 3 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSQGHRD*PCLWAT
Trigger: TGTGGCCCACAGGCAGGGCAAGTCTCGGTGGCCCTG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp GCAGTCTCTGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACAAGCAAGTTCATGTCTaGCTGTCTCACACTTCGTGG +
Preference number: 3 (lower is better)
Translates to: AVSGHVGMLRAPAACQGDKQVHV*LSHTSW
Trigger: CCACGAAGTGTGAGACAGCAAGACATGAACTTGCTT...GTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAGAGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR GCA 72 bp GGTGGGACTAAGGATGCTCCACGCGAGGCCTTGGAGTaGTCACACCCTGACAGATGTGTGGAGCTCTGTTCA +
Preference number: 3 (lower is better)
Translates to: GGTKDAPREALE*SHPDRCVELCS
Trigger: TGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCATCCTTAGTCCCACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp AGTCTCTGGACACGTGGGGATGCTGCGTGCTCCAGCTaGGTGTCAGGGGGACCAGGTATCAAGCAAGTTCAT +
Preference number: 3 (lower is better)
Translates to: SLWTRGDAACSS*VSGGPGIKQVH
Trigger: ATGAACTTGCTTGATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAGAGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CCA 72 bp ATCAAGCAAGTTCATGTCTTGCTGTCTCACACTTCGTaGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACAC +
Preference number: 3 (lower is better)
Translates to: IKQVHVLLSHTS*SGEAGHAAQAH
Trigger: GTGTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAAGACATGAACTTGCTTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CCA 72 bp GCGATTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTaGGTTGTGCAGGCTTTGGGTCTGTGGATTCAGCTA +
Preference number: 3 (lower is better)
Translates to: AIPASLGVPKRG*VVQALGLWIQL
Trigger: TAGCTGAATCCACAGACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAATCGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp GGATGCTCCACGCGAGGCCTTGGAGTGCTCACACCCTaGCAGATGTGTGGAGCTCTGTTCAGTTGCTGTTTT +
Preference number: 3 (lower is better)
Translates to: GCSTRGLGVLTP*QMCGALFSCCF
Trigger: AAAACAGCAACTGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp GCTTGGCTTTCCTCGAAGAAGAAACTGGCCTGTATCTaGACAGGTTCTCTGCCAGGCAAGCCTGCTCCCAGC +
Preference number: 3 (lower is better)
Translates to: AWLSSKKKLACI*TGSLPGKPAPS
Trigger: GCTGGGAGCAGGCTTGCCTGGCAGAGAACCTGTTCAGATACAGGCCAGTTTCTTCTTCGAGGAAAGCCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp TGGCCTTCAGGTAATCCCTGCTATGAAAGGCAGGGCTaGTACACTCCGCAGAGGAAACGTGGCCTGGATGAA +
Preference number: 3 (lower is better)
Translates to: WPSGNPCYERQG*YTPQRKRGLDE
Trigger: TTCATCCAGGCCACGTTTCCTCTGCGGAGTGTAGCAGCCCTGCCTTTCATAGCAGGGATTACCTGAAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp TCTGAGGTGGCCACAGAGGTGGTCTCTGGTCACACCTaGACCGGTCAAAAGTTGAAGACTCCAGGCCATTCT +
Preference number: 3 (lower is better)
Translates to: SEVATEVVSGHT*TGQKLKTPGHS
Trigger: AGAATGGCCTGGAGTCTTCAACTTTTGACCGGTGCAGGTGTGACCAGAGACCACCTCTGTGGCCACCTCAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp GGTTCCAGCAAGTTCCCAATGCGCAGGTATACACCCTaGAAGCCTGCAAAGTGGAGCCGTTGCAGCTGGAAA +
Preference number: 3 (lower is better)
Translates to: GSSKFPMRRYTP*KPAKWSRCSWK
Trigger: TTTCCAGCTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCGCATTGGGAACTTGCTGGAACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp AACTCTGCTCCAGACCAGCTCAAATGCCAGCTCATCTaGGGACTCTGGGGTGTCCTTAAACCATCTGGGTCC +
Preference number: 3 (lower is better)
Translates to: NSAPDQLKCQLI*GLWGVLKPSGS
Trigger: GGACCCAGATGGTTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGCAGAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp ACATGTGTGGGGATCCAGGTCACACCATGGAAGATGTaGAGAGTCCCTGGCCTTGGAGTGACCCCATTCACT +
Preference number: 3 (lower is better)
Translates to: TCVGIQVTPWKM*RVPGLGVTPFT
Trigger: AGTGAATGGGGTCACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACACATGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CCA 72 bp ATTGACACCACATGTGTGGGGATCCAGGTCACACCATaGAAGATGTGGAGAGTCCCTGGCCTTGGAGTGACC +
Preference number: 3 (lower is better)
Translates to: IDTTCVGIQVTP*KMWRVPGLGVT
Trigger: GGTCACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACACATGTGGTGTCAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR GCA 72 bp CAAGTTCCCAATGCGCAGGTATACACCCTGCAAGCCTaGAAAGTGGAGCCGTTGCAGCTGGAAACCGTCTTT +
Preference number: 3 (lower is better)
Translates to: QVPNAQVYTLQA*KVEPLQLETVF
Trigger: AAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCGCATTGGGAACTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp CCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTaGGGTGTCCTTAAACCATCTGGGTCCCTAGTTTTC +
Preference number: 3 (lower is better)
Translates to: PDQLKCQLIWGL*GVLKPSGSLVF
Trigger: GAAAACTAGGGACCCAGATGGTTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGCTCCACGCGAGGCCTaGGAGTGCTCACACCCTGAC +
Preference number: 3 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRAPREA*ECSHPD
Trigger: GTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAACTGTTTGGTTTGATCTaGGTCCGAAGCTCCTCTCCA +
Preference number: 3 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKLFGLI*VRSSSP
Trigger: TGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAG...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAAGATGGGAGGATCACTaGAATCTGGAGAGGTTGAGG +
Preference number: 3 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKRWEDH*NLERLR
Trigger: CCTCAACCTCTCCAGATTCAAGTGATCCTCCCATCT...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp CAGGTGCTCACACACACACACACACACAAATACAGCTaGTCCCCTTTCATCACTCCCCCTCACCTCTCACTG +
Preference number: 3 (lower is better)
Translates to: QVLTHTHTHKYS*SPFITPPHLSL
Trigger: CAGTGAGAGGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTGAGCACCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp GCGAGGCCTTGGAGTGCTCACACCCTGACAGATGTGTaGAGCTCTGTTCAGTTGCTGTTTTCTAGAGATACC +
Preference number: 3 (lower is better)
Translates to: ARPWSAHTLTDV*SSVQLLFSRDT
Trigger: GGTATCTCTAGAAAACAGCAACTGAACAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTGGGTTGTGCAGGCTTaGGGTCTGTGGATTCAGCTA +
Preference number: 3 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSWVVQA*GLWIQL
Trigger: TAGCTGAATCCACAGACCCAAAGCCTGCACAACCCA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTTCCCCACTGTTTGGTTaGATCTTGGTCCGAAGCTCC +
Preference number: 3 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSSPLFG*ILVRSS
Trigger: GGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGA...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCCCTGTTTGAGGAGCTaGGCTTTCCTCGAAGAAGAA +
Preference number: 3 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLPCLRS*AFLEEE
Trigger: TTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAGGG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCACTGGAGACACATCTTaGGTTCGATCCTTGGAGAAA +
Preference number: 3 (lower is better)
Translates to: INLSSESRSPMATRSVSGTGDTS*VRSLEK
Trigger: TTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGT...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp TTTGTGTTTTGGGATCCTTGGACTGAGATGACTATCTaGGGTGGCCACAGAGGTGGTCTCTGGTCACACCTG +
Preference number: 3 (lower is better)
Translates to: FVFWDPWTEMTI*GGHRGGLWSHL
Trigger: CAGGTGTGACCAGAGACCACCTCTGTGGCCACCTCAGATAGTCATCTCAGTCCAAGGATCCCAAAACACAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp AGACTGAGGAAGACAGTCACGGTCGAACAGACAACATaGTTCGGACTTACCAAAGGGAGAGTCGAGCTTTCC +
Preference number: 3 (lower is better)
Translates to: RLRKTVTVEQTT*FGLTKGRVELS
Trigger: GGAAAGCTCGACTCTCCCTTTGGTAAGTCCGAAGCATGTTGTCTGTTCGACCGTGACTGTCTTCCTCAGTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp CTGTTTGAGGAGCTTGGCTTTCCTCGAAGAAGAAACTaGCCTGTATCTGAACAGGTTCTCTGCCAGGCAAGC +
Preference number: 3 (lower is better)
Translates to: LFEELGFPRRRN*PVSEQVLCQAS
Trigger: GCTTGCCTGGCAGAGAACCTGTTCAGATACAGGCCAGTTTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp ACACCCTGCAAGCCTGCAAAGTGGAGCCGTTGCAGCTaGAAACCGTCTTTAGAAAAGGTACACTTCATGTCG +
Preference number: 3 (lower is better)
Translates to: TPCKPAKWSRCS*KPSLEKVHFMS
Trigger: CGACATGAAGTGTACCTTTTCTAAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp CTGGAAGAGCAGTCTGTAGTTGAGTCCTGTGAACAATaGCAGGATGTCCTTTCAAGATGCCCGGTGACAAGG +
Preference number: 3 (lower is better)
Translates to: LEEQSVVESCEQ*QDVLSRCPVTR
Trigger: CCTTGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACAGGACTCAACTACAGACTGCTCTTCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAGTTCTGTGGGCAGCTaGAAATCAGCATCGCACAGA +
Preference number: 3 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQSSVGS*KSASHR
Trigger: TCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACATGTGCAGCTGTTCTaGAAGCCTGCCAGGAATAAG +
Preference number: 3 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSHVQLF*KPARNK
Trigger: CTTATTCCTGGCAGGCTTCAAGAACAGCTGCACATG...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp AGTAACTACAGGGTGACTGGAATCACAGGCACAGACTaGGGAAGACAGTCACGGTCGAACAGACAACATGCT +
Preference number: 3 (lower is better)
Translates to: SNYRVTGITGTD*GRQSRSNRQHA
Trigger: AGCATGTTGTCTGTTCGACCGTGACTGTCTTCCTCAGTCTGTGCCTGTGATTCCAGTCACCCTGTAGTTACT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp TCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTaGTCCAGACCAGCTCAAATGCCAGCTCATCTGGGG +
Preference number: 3 (lower is better)
Translates to: SLISLCSLREKL*SRPAQMPAHLG
Trigger: CCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp CTTCAGTCTTTCTCTTCTGTTGGGGTCCCCACTGTTTaGTTTGATCTTGGTCCGAAGCTCCTCTCCATCTTC +
Preference number: 3 (lower is better)
Translates to: LQSFSSVGVPTV*FDLGPKLLSIF
Trigger: GAAGATGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACTGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTATGAGTTTGGTGGAATaGCTTCTCATCTCTCCATCC +
Preference number: 3 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSMSLVE*LLISPS
Trigger: GGATGGAGAGATGAGAAGCAATTCCACCAAACTCAT...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCATGCACCGGTCAAAAGTaGAAGACTCCAGGCCATTCT +
Preference number: 3 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPCTGQK*KTPGHS
Trigger: AGAATGGCCTGGAGTCTTCAACTTTTGACCGGTGCA...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CCA 72 bp CAAAGAAAGCTGTCTTTCCCCAGCTTCAAGAGTGGATaGGACAAACAGCATAAGGTTCAGGAAGCTGCACAG +
Preference number: 3 (lower is better)
Translates to: QRKLSFPSFKSG*DKQHKVQEAAQ
Trigger: CTGTGCAGCTTCCTGAACCTTATGCTGTTTGTCCCATCCACTCTTGAAGCTGGGGAAAGACAGCTTTCTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCATGGAGCTCTGTTCAGTaGCTGTTTTCTAGAGATACC +
Preference number: 3 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSWSSVQ*LFSRDT
Trigger: GGTATCTCTAGAAAACAGCAACTGAACAGAGCTCCA...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGTGCAAAGTGGAGCCGTaGCAGCTGGAAACCGTCTTT +
Preference number: 3 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRCKVEP*QLETVF
Trigger: AAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCA...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCTATCAAAATCTTGCTaGGGAAATGAGTGTCTCCTT +
Preference number: 3 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSLSKSC*GNECLL
Trigger: AAGGAGACACTCATTTCCCAAGCAAGATTTTGATAG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTCTTTGGTTCGATCCTaGGAGAAAGGTGTGAAAACA +
Preference number: 3 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQSLVRS*EKGVKT
Trigger: TGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp CCCTCTTTCTACAGAACCAGCTGTAACCGTGTTCTATaGCTTCCAGAAGGATCAGGGCTATGCCTTAAACAA +
Preference number: 3 (lower is better)
Translates to: PSFYRTSCNRVL*LPEGSGLCLKQ
Trigger: TTGTTTAAGGCATAGCCCTGATCCTTCTGGAAGGCATAGAACACGGTTACAGCTGGTTCTGTAGAAAGAGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAAAGTCTTTCTCTTCTGTaGGGGTCCCCACTGTTTGGT +
Preference number: 3 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQSLSLL*GSPLFG
Trigger: ACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACT...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGAGTTATGCTCTGAATaGTCACAATCATCTTTTCCC +
Preference number: 3 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPELCSE*SQSSFP
Trigger: GGGAAAAGATGATTGTGACAATTCAGAGCATAACTC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTTTTGCAATTCTAGATTaGTGTTTTGGGATCCTTGGA +
Preference number: 3 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSFAILD*CFGILG
Trigger: TCCAAGGATCCCAAAACACAAATCTAGAATTGCAAA...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp GATGACATGAAATTGAACCAACTCCCAGTACCGCTCTaGATTATTCTTACTGTGCCTGTAGCTCACAGAAGA +
Preference number: 3 (lower is better)
Translates to: DDMKLNQLPVPL*IILTVPVAHRR
Trigger: TCTTCTGTGAGCTACAGGCACAGTAAGAATAATTCAGAGCGGTACTGGGAGTTGGTTCAATTTCATGTCATC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp CCAAGGAAGATCCTAATATCCCCAAATGAAAAAGGTTaGTTCTTCTTGAACTGCCACCTGCAGTGTGTATGT +
Preference number: 3 (lower is better)
Translates to: PRKILISPNEKG*FFLNCHLQCVC
Trigger: ACATACACACTGCAGGTGGCAGTTCAAGAAGAATCAACCTTTTTCATTTGGGGATATTAGGATCTTCCTTGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp TTCAGAGTCTCCAAGGAAGATCCTAATATCCCCAAATaGAAAAGGTTGATTCTTCTTGAACTGCCACCTGCA +
Preference number: 3 (lower is better)
Translates to: FRVSKEDPNIPK*KRLILLELPPA
Trigger: TGCAGGTGGCAGTTCAAGAAGAATCAACCTTTTTCATTTGGGGATATTAGGATCTTCCTTGGAGACTCTGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp ATTTCTCCTTTCACTCGGTTTCATAGATTTGTCAGGTaGTCACACACACACACACACACAAATACAGCTGAT +
Preference number: 3 (lower is better)
Translates to: ISPFTRFHRFVR*SHTHTHTNTAD
Trigger: ATCAGCTGTATTTGTGTGTGTGTGTGTGTGTGAGCACCTGACAAATCTATGAAACCGAGTGAAAGGAGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR GCA 72 bp CCTACAAGGACAAAATCTAGAAGTCACGTTCATAACTaGCATTCTTTGTGTGCCATTTTCAGAGTCTCCAAG +
Preference number: 3 (lower is better)
Translates to: PTRTKSRSHVHN*HSLCAIFRVSK
Trigger: CTTGGAGACTCTGAAAATGGCACACAAAGAATGGCAGTTATGAACGTGACTTCTAGATTTTGTCCTTGTAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR-3UTR CAA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCATGTGAAAACATGAGTTaGGTGGAATTGCTTCTCATC +
Preference number: 3 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPCENMS*VELLLI
Trigger: GATGAGAAGCAATTCCACCAAACTCATGTTTTCACA...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR TCA 72 bp GTGCCATCTTTAAGTTTTAAACCACTCAACTCCAATTaGTCCTCAAGTTTGCTCCACATAAAGCTATTCTAT +
Preference number: 3 (lower is better)
Translates to: VPSLSFKPLNSN*SSSLLHIKLFY
Trigger: ATAGAATAGCTTTATGTGGAGCAAACTTGAGGATCAATTGGAGTTGAGTGGTTTAAAACTTAAAGATGGCAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CTGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCGTGGGGATGCTGCGTaGTCCAGCTGCGTGTCAGGG +
Preference number: 4 (lower is better)
Translates to: LDTWGCCVLQLRVRGTRYRGDAA*SSCVSG
Trigger: CCCTGACACGCAGCTGGAGCACGCAGCATCCCCACG...ATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp ACACTTCGTGGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACACAAAGCGCAGGGACACGTGGGGATGCTaGGTGCTCCAGCTGCGTGTC +
Preference number: 4 (lower is better)
Translates to: TLRGVGRRGMRPKHTKRRDTWGC*VLQLRV
Trigger: GACACGCAGCTGGAGCACGCAGCATCCCCACGTGTC...CCTGCGCTTTGTGTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp ATGTGGAGAGTCCCTGGCCTTGGAGTGACCCCATTCACTTGGCCGGCGTCCCCCTCACACTTCGTGGAGTaGGGAGGCGGGGCATGCGGC +
Preference number: 4 (lower is better)
Translates to: MWRVPGLGVTPFTWPASPSHFVE*GGGACG
Trigger: GCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGA...GGGGGACGCCGGCCAAGTGAATGGGGTCACTCCAAGGCCAGGGACTCTCCACAT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp CCCGGGGTGCATCGGTCAGCTCCCCTGCACAGCGGAATTCCGCTTTCTCACTCCCAGTCTCTGGACACGTaGGGATGCTGCGTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: PGVHRSAPLHSGIPLSHSQSLDT*GCCVLQ
Trigger: CTGGAGCACGCAGCATCCCCACGTGTCCAGAGACTG...GGAGTGAGAAAGCGGAATTCCGCTGTGCAGGGGAGCTGACCGATGCACCCCGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp CACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCAAGCTGTCATAAGCGAGCCTaGGGGCTGTTTGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: HVGMLRAPAACQGDQVSSCHKRA*GLFVRG
Trigger: CCCTCGCACAAACAGCCCTCAGGCTCGCTTATGACA...GCTTGATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp CCACATGTGTGGGGATCCAGGTCACACCATGGAAGATGTGGAGAGTCCCTGGCCTGGGGAGGCGGGGCATaGGGCCCAAGCACACAAAGC +
Preference number: 4 (lower is better)
Translates to: PHVWGSRSHHGRCGESLAWGGGA*GPSTQS
Trigger: GCTTTGTGTGCTTGGGCCGCATGCCCCGCCTCCCCA...GGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACACATGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp CATGTGTGGGGATCCAGGTCACACCATGGAAGATGTGGAGAGTCCCTGGCCTTGCGGCCTCCCACCGCGTaGAAGGGAAGCCTTGGGCTG +
Preference number: 4 (lower is better)
Translates to: HVWGSRSHHGRCGESLALRPPTA*KGSLGL
Trigger: CAGCCCAAGGCTTCCCTTCCACGCGGTGGGAGGCCG...CAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACACATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp TCTTGCTGTCTCACACTTCGTGGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACTTTCAAGATGCCCGGTaGCAAGGGCCTCCATCCTCA +
Preference number: 4 (lower is better)
Translates to: SCCLTLRGVGRRGMRPKHFQDAR*QGPPSS
Trigger: TGAGGATGGAGGCCCTTGTCACCGGGCATCTTGAAA...GTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGGCGGCGGGAACAGATaGGAGCTCCACTCCGCAGCC +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKGGGNR*ELHSAA
Trigger: GGCTGCGGAGTGGAGCTCGCATCTGTTCCCGCCGCC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCAAGCCTGAGGGCTGTTTGTaGGAGGGCAGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: TRGDAACSSCVSGGPGIKPEGCL*EGRFLS
Trigger: GGACAAGAACCTGCCCTCGCACAAACAGCCCTCAGG...CTTGATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp ACACAAAGCGCAGGGGCCAGGAAGGGAGTAACACCCCGGGCTAGAGCAATGTTTGCTGCGTGCTCCAGCTaGGTGTCAGGGGGACCAGGT +
Preference number: 4 (lower is better)
Translates to: TQSAGARKGVTPRARAMFAACSS*VSGGPG
Trigger: ACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGC...AAACATTGCTCTAGCCCGGGGTGTTACTCCCTTCCTGGCCCCTGCGCTTTGTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCGCATGGGGCCATTGCTaGGAACCGGAGGTGGGCAAC +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVAWGHC*EPEVGN
Trigger: GTTGCCCACCTCCGGTTCCCAGCAATGGCCCCATGC...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCAAGCGATGTGGAGAGTCCCTaGCCTTGGAGTGACCCCATT +
Preference number: 4 (lower is better)
Translates to: HVGMLRAPAACQGDQVSSDVESP*PWSDPI
Trigger: AATGGGGTCACTCCAAGGCCAGGGACTCTCCACATC...GCTTGATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCCCCACGCGCTTGTGGTaGTGGAAGTCGCGGAGCCGC +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCPTRLW*WKSRSR
Trigger: GCGGCTCCGCGACTTCCAGCACCACAAGCGCGTGGG...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGGGCTCCCCAGAGGCTaGATGGGGCCATTGCTGGGA +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGGLPRG*MGPLLG
Trigger: TCCCAGCAATGGCCCCATGCAGCCTCTGGGGAGCCC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCGCCCCTCGCGCACCTTaGCAAAGGAGCCCTCGCCCA +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCAPRAP*QRSPRP
Trigger: TGGGCGAGGGCTCCTTTGCCAAGGTGCGCGAGGGGC...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ACACCATCTTGTGCAGGTCCTAGCAGGCTCCTGAGCCAGGCCAGGGGGTACTTACGGGGAAGCTGGACTTaGAGGCCTTCCGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: TPSCAGPSRLLSQARGYLRGSWT*RPSGPS
Trigger: TGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCG...TAAGTACCCCCTGGCCTGGCTCAGGAGCCTGCTAGGACCTGCACAAGATGGTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATGCTGGGAACCGGAGGTaGGCAACACAGGCCCTCCTC +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDAGNRR*ATQALL
Trigger: GAGGAGGGCCTGTGTTGCCCACCTCCGGTTCCCAGC...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp GCTACAGGTGGGACTAAGGATGCTCCACGCGAGGCCTaGGAGTGCTCACACCCTGACAGATGTGTGGAGCTC +
Preference number: 4 (lower is better)
Translates to: ATGGTKDAPREA*ECSHPDRCVEL
Trigger: GAGCTCCACACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGCATCCTTAGTCCCACCTGTAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTACCACCCCGGCCCGGTaGAGGTGCTCTACGGCAGAG +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSTTPAR*RCSTAE
Trigger: CTCTGCCGTAGAGCACCTGCACCGGGCCGGGGTGGT...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATGTGGGGGATGCCAGTaGTTCCGGGCCCTGGCTGAT +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKCGGCQ*FRALAD
Trigger: ATCAGCCAGGGCCCGGAAGCACTGGCATCCCCCACA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CTCCCACCGCGTGGAAGGGAAGCCTTGGGCTGTGTCCACACACCATCTTGTGCAATCGGTCAGCTCCCCTaGACAGCGGAATTCCGCTTT +
Preference number: 4 (lower is better)
Translates to: LPPRGREALGCVHTPSCAIGQLP*TAEFRF
Trigger: AAAGCGGAATTCCGCTGTGCAGGGGAGCTGACCGAT...TGCACAAGATGGTGTGTGGACACAGCCCAAGGCTTCCCTTCCACGCGGTGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGCTGCCGGCGCCCTCTaGAAGGCAGCAGAAGAAAGC +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKAAGAL*KAAEES
Trigger: GCTTTCTTCTGCTGCCTTCCAGAGGGCGCCGGCAGC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CACTTCGTGGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACACAAAGCGCAGGGTTATCCTGCACGGCATaGAATTCAAGATCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: HFVEWGGGACGPSTQSAGLSCTA*NSRSRV
Trigger: GACACGAGATCTTGAATTCCATGCCGTGCAGGATAA...CCCTGCGCTTTGTGTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp ACAGCGGAATTCCGCTTTCTCACTCCTCGGCCTCCCACCGCGTGGAAGGGAAGCACACCATGGAAGATGTaGAGAGTCCCTGGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: TAEFRFLTPRPPTAWKGSTPWKM*RVPGLG
Trigger: TCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGT...GCTTCCCTTCCACGCGGTGGGAGGCCGAGGAGTGAGAAAGCGGAATTCCGCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp TCTTGCTGTCTCACACTTCGTGGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACATCCAGGTCACACCATaGAAGATGTGGAGAGTCCCT +
Preference number: 4 (lower is better)
Translates to: SCCLTLRGVGRRGMRPKHIQVTP*KMWRVP
Trigger: AGGGACTCTCCACATCTTCCATGGTGTGACCTGGAT...GTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp ACACAAAGCGCAGGGGCCAGGAAGGGAGTAACACCCCGGGCTAGAGCAATGTTTCTGTCTCACACTTCGTaGAGTGGGGAGGCGGGGCAT +
Preference number: 4 (lower is better)
Translates to: TQSAGARKGVTPRARAMFLSHTS*SGEAGH
Trigger: ATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAG...AAACATTGCTCTAGCCCGGGGTGTTACTCCCTTCCTGGCCCCTGCGCTTTGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCTTCCGGGCCCTGGCTaGTGGGGCTCCGGTTTCTTC +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLLPGPG*WGSGFF
Trigger: GAAGAAACCGGAGCCCCATCAGCCAGGGCCCGGAAG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACGCTGCATGGGGCCATTaGTGGGAACCGGAGGTGGGC +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNAAWGH*WEPEVG
Trigger: GCCCACCTCCGGTTCCCAGCAATGGCCCCATGCAGC...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCCCAGACCAGCTCAAATaGCAGCTCATCTGGGGACTC +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVPDQLK*QLIWGL
Trigger: GAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGG...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TGTGAACAATGGCAGGATGTCCTTTCAAGATGCCCGGTGACAAGGGCCTCCATCCTGGACACGTGGGGATaGTGCGTGCTCCAGCTGCGT +
Preference number: 4 (lower is better)
Translates to: CEQWQDVLSRCPVTRASILDTWG*CVLQLR
Trigger: ACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAG...GATGGAGGCCCTTGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCACGCGCTTGTGGTGCTaGAAGTCGCGGAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTTRLWC*KSRSRS
Trigger: CGAGCGGCTCCGCGACTTCCAGCACCACAAGCGCGT...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CTGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCCTTCAGGAGGGCTTTaGTGTTCTGAATCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: LDTWGCCVLQLRVRGTRYPSGGL*CSESVS
Trigger: TGACACAGATTCAGAACACCAAAGCCCTCCTGAAGG...ATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACCGGGGTCCTGGGCGGTaGCACGGGGATGAACTCCAT +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNRGPGR*HGDELH
Trigger: ATGGAGTTCATCCCCGTGCCACCGCCCAGGACCCCG...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp CTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTaGGGTCTGTGGATTCAGCTACAGGTGGGACTAAGG +
Preference number: 4 (lower is better)
Translates to: LGVPKRGWVVQA*GLWIQLQVGLR
Trigger: CCTTAGTCCCACCTGTAGCTGAATCCACAGACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp GTGTCAGGGGGACCAGGTATCAAGCAAGTTCATGTCTaGCTGTCTCACACTTCGTGGAGTGGGGAGGCGGGG +
Preference number: 4 (lower is better)
Translates to: VSGGPGIKQVHV*LSHTSWSGEAG
Trigger: CCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAAGACATGAACTTGCTTGATACCTGGTCCCCCTGACAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCTGTCATAAGCGAGCCTaGGGGCTGTTTGTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGCHKRA*GLFVRG
Trigger: CCCTCGCACAAACAGCCCTCAGGCTCGCTTATGACA...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGTTGACATCCCCCTCTaGCCATGGCAGCCACTCTCT +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKVDIPL*PWQPLS
Trigger: AGAGAGTGGCTGCCATGGTCAGAGGGGGATGTCAAC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCTCTTGTGCATCAGGTTaGCCCCAGGGCACAGCTCCA +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGSCASG*PQGTAP
Trigger: TGGAGCTGTGCCCTGGGGGCAACCTGATGCACAAGA...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCAGCTTCTCGGTCATGTaGAGCACGACGCTCGGGCTC +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCSFSVM*STTLGL
Trigger: GAGCCCGAGCGTCGTGCTGCACATGACCGAGAAGCT...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCTTCCTTGTGGGGGATaGCAGTGCTTCCGGGCCCTG +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSLPCGG*QCFRAL
Trigger: CAGGGCCCGGAAGCACTGGCATCCCCCACAAGGAAG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATATGGAGAGGCGACATaGTTCCGGATGGCAGACCCG +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKYGEAT*FRMADP
Trigger: CGGGTCTGCCATCCGGAAGCATGTCGCCTCTCCATA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGCCTGCCCCCGGCTCCTaGTGGCCTTCAGGTAATCCC +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQPAPGS*WPSGNP
Trigger: GGGATTACCTGAAGGCCAGCAGGAGCCGGGGGCAGG...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACCACCGAGACTTGCCCTaGCTGTGGGCCACAGCACTC +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNHRDLP*LWATAL
Trigger: GAGTGCTGTGGCCCACAGGCAGGGCAAGTCTCGGTG...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCGACATGCTTCCGGATaGCAGACCCGGGGACAGCGT +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLRHASG*QTRGQR
Trigger: ACGCTGTCCCCGGGTCTGCCATCCGGAAGCATGTCG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GCTGTCTCACACTTCGTGGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACACAAGAGTCCTGTGAACAATaGCAGGATGTCCTTTCAAGA +
Preference number: 4 (lower is better)
Translates to: AVSHFVEWGGGACGPSTQESCEQ*QDVLSR
Trigger: TCTTGAAAGGACATCCTGCCATTGTTCACAGGACTC...TTGTGTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
3UTR CAA 72 bp CGCCGAGCTCTGAGCCGCACCAGTTCTGTGGGCAGCTaGAAATCAGCATCGCACAGAGATAATGCTGCCTTC +
Preference number: 4 (lower is better)
Translates to: RRALSRTSSVGS*KSASHRDNAAF
Trigger: GAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGCTCGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATTGCCACACTGTGTGCTaGACGGATCCGAGTAACCCA +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDCHTVC*TDPSNP
Trigger: TGGGTTACTCGGATCCGTTCAGCACACAGTGTGGCA...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAAATGGCCAAGGGGTCTaGCCTCATCCTAGAATGCCC +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKNGQGV*PHPRMP
Trigger: GGGCATTCTAGGATGAGGTCAGACCCCTTGGCCATT...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTCCGGCCCGGTGCAGGTaGTCTACGGCAGAGATGAGC +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSPARCR*STAEMS
Trigger: GCTCATCTCTGCCGTAGAGCACCTGCACCGGGCCGG...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCCTCCAGGGGCCTATCTaGAGATGGCTGCAGACTCTG +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCLQGPI*RWLQTL
Trigger: CAGAGTCTGCAGCCATCTGCAGATAGGCCCCTGGAG...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCATGATAGGAATTGGCTaGCCCTGGAGCCAACCCTCC +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGMIGIG*PWSQPS
Trigger: GGAGGGTTGGCTCCAGGGGCAGCCAATTCCTATCAT...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCTCAGAACTGCCTCTCTaGCTTCTGGCAAGGCTGCCT +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGSELPL*LLARLP
Trigger: AGGCAGCCTTGCCAGAAGGCAGAGAGGCAGTTCTGA...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCCCACCTAAGCTGGAGTaGAGTAGCATGATCTTGGCT +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVPPKLE*SSMILA
Trigger: AGCCAAGATCATGCTACTGCACTCCAGCTTAGGTGG...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATACACCCTGCAAGCCTaGAAAGTGGAGCCGTTGCAG +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKYTLQA*KVEPLQ
Trigger: CTGCAACGGCTCCACTTTGCAGGCTTGCAGGGTGTA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCGGCTATCCAGGGGTTTaGTGCTTACTTGGGAAGTCA +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVGYPGV*CLLGKS
Trigger: TGACTTCCCAAGTAAGCAGCAAACCCCTGGATAGCC...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCATCTTCAAGTCTCTGTaGACCACCCCGGCCCGGTGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTIFKSL*TTPARC
Trigger: GCACCGGGCCGGGGTGGTCCACAGAGACTTGAAGAT...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAGGGGGTCTTCCTTGTaGGGGATGCCAGTGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNRGSSL*GMPVLP
Trigger: CGGAAGCACTGGCATCCCCCACAAGGAAGACCCCCT...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGCCCCCGGCTCCTGCTaGCCTTCAGGTAATCCCTGC +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPAPGSC*PSGNPC
Trigger: GCAGGGATTACCTGAAGGCCAGCAGGAGCCGGGGGC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATCCACCAGCTCAGATGTaGATACATGTGGAGGGGGAC +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDPPAQM*IHVEGD
Trigger: GTCCCCCTCCACATGTATCCACATCTGAGCTGGTGG...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGCTTCCTGCTGCCGATaGGGTAGTTGCCCACGCGCT +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPASCCR*GSCPRA
Trigger: AGCGCGTGGGCAACTACCTCATCGGCAGCAGGAAGC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTGAGAGCGCAGGAAACTaGTGGCACCTGTGGAGAGCT +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSESAGN*WHLWRA
Trigger: AGCTCTCCACAGGTGCCATCAGTTTCCTGCGCTCTC...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp CTGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATTTGGAGAATGGTCGATaGAGAAAATCCCCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: LDTWGCCVLQLRVRGTRYLENGR*RKSPLF
Trigger: AAAAAGAGGGGATTTTCTTCATCGACCATTCTCCAA...ATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATGATGGCTGCAGACTCTaGTGGCGCTTCCTTAACATC +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDDGCRL*WRFLNI
Trigger: GATGTTAAGGAAGCGCCATCAGAGTCTGCAGCCATC...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATAGTGGAAGGGGTTGGTaGGTACTTGGGAGGAAGGAA +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDSGRGW*VLGRKE
Trigger: TTCCTTCCTCCCAAGTACTCACCAACCCCTTCCACT...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATAAACTGGCCTGTATCTaGACAGGTTCTCTGCCAGGC +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDKLACI*TGSLPG
Trigger: GCCTGGCAGAGAACCTGTTCAGATACAGGCCAGTTT...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATGCACCGGTCAAAAGTTaGAGACTCCAGGCCATTCTG +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDAPVKS*RLQAIL
Trigger: CAGAATGGCCTGGAGTCTTCAACTTTTGACCGGTGC...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCTGCTCTCGAACTCCTaGGCTCAAGCGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSLLSNS*AQAIHL
Trigger: CAGGTGGATCGCTTGAGCTCAGGAGTTCGAGAGCAG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATGGAGCCCAGGAGTTTaGGATCAGCCTGAGCAACAT +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKWSPGV*DQPEQH
Trigger: ATGTTGCTCAGGCTGATCTCAAACTCCTGGGCTCCA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGGCTTGATCTGTTGTTaGCATCCCCCTCTGACCATG +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGGLICC*HPPLTM
Trigger: CATGGTCAGAGGGGGATGTCAACAACAGATCAAGCC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGTCCCCGGTCAGCACGTaGAGCCCCTCGCGCACCTTG +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRSPVST*SPSRTL
Trigger: CAAGGTGCGCGAGGGGCTGCACGTGCTGACCGGGGA...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGGCTGTCGGATGTATCTaGGGGCTTCGGACTCCTCCA +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLAVGCI*GLRTPP
Trigger: TGGAGGAGTCCGAAGCCCGCAGATACATCCGACAGC...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCCTGAGGGCTGTTTGTaGGAGGGCAGGTTCTTGTCC +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSPEGCL*EGRFLS
Trigger: GGACAAGAACCTGCCCTCGCACAAACAGCCCTCAGG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACCGCGAGGCCTTGGAGTaGTCACACCCTGACAGATGT +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNREALE*SHPDRC
Trigger: ACATCTGTCAGGGTGTGAGCACTCCAAGGCCTCGCG...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCCTGCACCCTGTCAAGTaGCAGCTGGATACAGTCAGA +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGLHPVK*QLDTVR
Trigger: TCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAG...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCTTGAGGGAGAAACTCTaGTCCAGACCAGCTCAAATG +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVLREKL*SRPAQM
Trigger: CATTTGAGCTGGTCTGGAGCAGAGTTTCTCCCTCAA...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCGGCCGTATTTCTTCCTaGCGAGCAGTTCAGGTGCAG +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCGRISS*RAVQVQ
Trigger: CTGCACCTGAACTGCTCGCCAGGAAGAAATACGGCC...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCACCAGACATCGATTTTaGGGCCGTATTTCTTCCTGG +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVTRHRF*GRISSW
Trigger: CCAGGAAGAAATACGGCCCCAAAATCGATGTCTGGT...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ACCATGGAAGATGTGGAGAGTCCCTGGCCTTGGAGTGACCCCATTCACTTGGCCCCTCATAGGACTCCTTaGGGGCCCTGTACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: TMEDVESPWPWSDPIHLAPHRTP*GPCTFL
Trigger: TAGAAAAGTACAGGGCCCCCAAGGAGTCCTATGAGG...GGCCAAGTGAATGGGGTCACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp TGGACACGTGGGGATGCTGCGTGCTCCAGCTGCGTGTCAGGGGGACCAGGTATCTCTTGTCCAACTTCTTaGAGAATGGTCGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: WTRGDAACSSCVSGGPGISCPTS*RMVDEE
Trigger: TTCTTCATCGACCATTCTCCAAGAAGTTGGACAAGA...GATACCTGGTCCCCCTGACACGCAGCTGGAGCACGCAGCATCCCCACGTGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTCTTTGTCGGGGAAGCTaGACTTGGAGGCCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSLCRGS*TWRPSG
Trigger: ACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAG...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTAGTGCTTCCGGGCCCTaGCTGATGGGGCTCCGGTTT +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSSASGP*LMGLRF
Trigger: AAACCGGAGCCCCATCAGCCAGGGCCCGGAAGCACT...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTACCCCAAACCCCGCTaGCCCAAGTTAGCACTGGGT +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSYPKPR*PKLALG
Trigger: ACCCAGTGCTAACTTGGGCCAGCGGGGTTTGGGGTA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGGGGTCCCCACTGTTTaGTTTGATCTTGGTCCGAAG +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKGVPTV*FDLGPK
Trigger: CTTCGGACCAAGATCAAACCAAACAGTGGGGACCCC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCACAGAGGTGGTCTCTaGTCACACCTGCACCGGTCA +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLHRGGL*SHLHRS
Trigger: TGACCGGTGCAGGTGTGACCAGAGACCACCTCTGTG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ACCATGGAAGATGTGGAGAGTCCCTGGCCTTGGAGTGACCCCATTCACTTGGCCTTGACACCACATGTGTaGGGATCCAGGTCACACCAT +
Preference number: 4 (lower is better)
Translates to: TMEDVESPWPWSDPIHLALTPHV*GSRSHH
Trigger: ATGGTGTGACCTGGATCCCCACACATGTGGTGTCAA...GGCCAAGTGAATGGGGTCACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp CAAGTTCATGTCTTGCTGTCTCACACTTCGTGGAGTGGGGAGGCGGGGCATGCGGAGCAATGTTTTGATTaGCACCACATGTGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: QVHVLLSHTSWSGEAGHAEQCFD*HHMCGD
Trigger: ATCCCCACACATGTGGTGTCAATCAAAACATTGCTC...CGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAAGACATGAACTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGGCGAGCAGTTCAGGTaGAGCGTAGGCAGGGCTGCC +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRGEQFR*SVGRAA
Trigger: GGCAGCCCTGCCTACGCTGCACCTGAACTGCTCGCC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCGAGGTTGGGTTGTaGAGGCTTTGGGTCTGTGGA +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLSEVGL*RLWVCG
Trigger: TCCACAGACCCAAAGCCTGCACAACCCAACCTCGCT...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCTATGAAAGGCAGGGCTaGTACACTCCGCAGAGGAAA +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGYERQG*YTPQRK
Trigger: TTTCCTCTGCGGAGTGTAGCAGCCCTGCCTTTCATA...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCCTTCTCACCAATGACTaGACCCTGTCAAGTGCCAGC +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCLLTND*TLSSAS
Trigger: GCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATGTCTCTGGTCACACCTaGACCGGTCAAAAGTTGAAG +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDVSGHT*TGQKLK
Trigger: CTTCAACTTTTGACCGGTGCAGGTGTGACCAGAGAC...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGCAAAGTGGAGCCGTTaGAGCTGGAAACCGTCTTTA +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKAKWSR*SWKPSL
Trigger: TAAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTAGTTGAGTCCTGTGAACAATGGCAGGATGTCCTTTCAAGATGCCCGGTGACACTTTGTCGGGGAAGCTaGACTTGGAGGCCTTCCGGT +
Preference number: 4 (lower is better)
Translates to: VVESCEQWQDVLSRCPVTLCRGS*TWRPSG
Trigger: ACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAG...TGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACAGGACTCAACTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGGGCTTTTCACACAATTaGGGCTCCCCAGAGGCTGCA +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLGFSHN*GSPEAA
Trigger: TGCAGCCTCTGGGGAGCCCCAATTGTGTGAAAAGCC...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACGTCCCTAAGCGAGGTTaGGTTGTGCAGGCTTTGGGT +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNVPKRG*VVQALG
Trigger: ACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGAC...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAGGTGGCCACAGAGGTaGTCTCTGGTCACACCTGCA +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQRWPQR*SLVTPA
Trigger: TGCAGGTGTGACCAGAGACCACCTCTGTGGCCACCT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp GAGGTGGTCTCTGGTCACACCTGCACCGGTCAAAAGTaGAAGACTCCAGGCCATTCTGTAACTGGTCTCCTA +
Preference number: 4 (lower is better)
Translates to: EVVSGHTCTGQK*KTPGHSVTGLL
Trigger: TAGGAGACCAGTTACAGAATGGCCTGGAGTCTTCAACTTTTGACCGGTGCAGGTGTGACCAGAGACCACCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTGGAGTGCTCACACCCTaGCAGATGTGTGGAGCTCTG +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSGVLTP*QMCGAL
Trigger: CAGAGCTCCACACATCTGTCAGGGTGTGAGCACTCC...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGCCCTAGAGCCGTGGTaGTCCCCTAGGGAAGAAACA +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPALEPW*SPREET
Trigger: TGTTTCTTCCCTAGGGGATCACCACGGCTCTAGGGC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAGGTTGAGGCTGCAGTaGACTGTGATTGTGCCACTG +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNRLRLQ*TVIVPL
Trigger: CAGTGGCACAATCACAGTTCACTGCAGCCTCAACCT...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAAAGGTTGATTCTTCTTaGACTGCCACCTGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKKVDSS*TATCSV
Trigger: CACACTGCAGGTGGCAGTTCAAGAAGAATCAACCTT...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTCCAGCGATTCGCCAGTaGCTGCTGAATATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSPAIRQ*LLNIWP
Trigger: AGGCCAAATATTCAGCAGGCACTGGCGAATCGCTGG...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCATTGGTTGCCCCAAATaGCTCATTATTGGAACACCA +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVIGCPK*LIIGTP
Trigger: TGGTGTTCCAATAATGAGGCATTTGGGGCAACCAAT...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTAGTTGAGTCCTGTGAACAATGGCAGGATGTCCTTTCAAGATGCCCGGTGACAGATGTCCTTTCAAGATaGCCGGTGACAAGGGCCTCC +
Preference number: 4 (lower is better)
Translates to: VVESCEQWQDVLSRCPVTDVLSR*PVTRAS
Trigger: GGAGGCCCTTGTCACCGGGCATCTTGAAAGGACATC...TGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACAGGACTCAACTAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp TGTGGGGATCCAGGTCACACCATGGAAGATGTGGAGAGTCCCTGGCCTTGGAGTAGCAAGTTCATGTCTTaGTGTCTCACACTTCGTGGA +
Preference number: 4 (lower is better)
Translates to: CGDPGHTMEDVESPWPWSSKFMS*CLTLRG
Trigger: TCCACGAAGTGTGAGACAGCAAGACATGAACTTGCT...ACTCCAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCCGGGGAAGCTGGACTTaGAGGCCTTCCGGTCCTTCA +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSRGSWT*RPSGPS
Trigger: TGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCG...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCAACAGCGTCCTCTCGCTaGAATTTCTGCGAGCCAAGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSTASSR*NFCEPS
Trigger: GCTTGGCTCGCAGAAATTCCAGCGAGAGGACGCTGT...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACGGATGCAAAGGAGTATaGAGAGGCGACATGCTTCCG +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNGCKGV*RGDMLP
Trigger: CGGAAGCATGTCGCCTCTCCATACTCCTTTGCATCC...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGGGCCTATCTGCAGATaGCTGCAGACTCTGATGGCG +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPGPICR*LQTLMA
Trigger: CGCCATCAGAGTCTGCAGCCATCTGCAGATAGGCCC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCAGGCTTTGGGTCTGTaGATTCAGCTACAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSQALGL*IQLQVG
Trigger: TCCCACCTGTAGCTGAATCCACAGACCCAAAGCCTG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTGGGTTGTGCAGGCTTTaGGTCTGTGGATTCAGCTAC +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSGLCRL*VCGFSY
Trigger: GTAGCTGAATCCACAGACCCAAAGCCTGCACAACCC...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAAGGGTTGGTGAGTACTTaGGAGGAAGGAAGATCTGAA +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKGLVST*EEGRSE
Trigger: TTCAGATCTTCCTTCCTCCCAAGTACTCACCAACCC...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCGAAGGAAGCAGTAACTaGGACAATTTCAAGAGGTCA +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVEGSSN*DNFKRS
Trigger: TGACCTCTTGAAATTGTCCCAGTTACTGCTTCCTTC...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCTATCAAGGAGCTGAGTaGTATTGGGGTGGCGGATCA +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTYQGAE*YWGGGS
Trigger: TGATCCGCCACCCCAATATCACTCAGCTCCTTGATA...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTTCCTGTTGGGATAGGTaGCATTACAGGGCACTTTGC +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSSCWDR*HYRALC
Trigger: GCAAAGTGCCCTGTAATGTCACCTATCCCAACAGGA...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGCGGTGGCACGGGGATaGACTCCATGGAAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSAVARG*TPWKKK
Trigger: CTTCTTCTTCCATGGAGTTCATCCCCGTGCCACCGC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATGTCACCACTGGTGAATaGGAGAATGATTCAGAACTG +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDVTTGE*ENDSEL
Trigger: CAGTTCTGAATCATTCTCTCATTCACCAGTGGTGAC...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCCCAAATGAAAAAGGTTaGTTCTTCTTGAACTGCCAC +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVPNEKG*FFLNCH
Trigger: GTGGCAGTTCAAGAAGAATCAACCTTTTTCATTTGG...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTGGGGCTTTGCACAGTaGACAGTGAGCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQWGFAQ*TVSFST
Trigger: AGTGGAGAAGCTCACTGTTCACTGTGCAAAGCCCCA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGGTTGTGATGACGGCTTaGTCTGTTGTTGACATCCCC +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLVVMTA*SVVDIP
Trigger: GGGGATGTCAACAACAGATCAAGCCGTCATCACAAC...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAAGTAGACAATAGCGGCTaGCCAGGGGACGCGGGACCG +
Preference number: 4 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQVDNSG*PGDAGP
Trigger: CGGTCCCGCGTCCCCTGGGCAGCCGCTATTGTCTAC...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCGAGACCAGAGTTGGATaGAAAGGAGTATGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTETRVG*KGVWRG
Trigger: GCCTCTCCATACTCCTTTGCATCCAACTCTGGTCTC...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGGAGCTCTGTTCAGTTaGTGTTTTCTAGAGATACCC +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGGALFS*CFLEIP
Trigger: GGGTATCTCTAGAAAACAGCAACTGAACAGAGCTCC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTGTAACTGTGGCCAACTaGTGTGAGAGGCACACATGT +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSVTVAN*CERHTC
Trigger: ACATGTGTGCCTCTCACAGCAGTTGGCCACAGTTAC...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGTCTGCCAGGCAAGCCTaGTCCCAGCTCCCAGCAAAC +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRSARQA*SQLPAN
Trigger: GTTTGCTGGGAGCTGGGAGCAGGCTTGCCTGGCAGA...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTCGCAGGTATACACCCTaGAAGCCTGCAAAGTGGAGC +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSRRYTP*KPAKWS
Trigger: GCTCCACTTTGCAGGCTTGCAGGGTGTATACCTGCG...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCGACTACTGGGGCTTTaGACAGTGAACAGTGAGCTT +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLRLLGL*TVNSEL
Trigger: AAGCTCACTGTTCACTGTGCAAAGCCCCAGTAGTCG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCATTGCCCACGCGCTTGTaGTGCTGGAAGTCGCGGAGC +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPLPTRL*CWKSRS
Trigger: GCTCCGCGACTTCCAGCACCACAAGCGCGTGGGCAA...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACTGTGGAGAGCTGAGTaGGGAGGGGGTTCATTTCTT +
Preference number: 4 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSLWRAE*GGGSFL
Trigger: AAGAAATGAACCCCCTCCCCACTCAGCTCTCCACAG...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTTAAGAGGAAGTAGATaGCCAGGATGTGGCAGGCGC +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQLRGSR*PGCGRR
Trigger: GCGCCTGCCACATCCTGGCCATCTACTTCCTCTTAA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTCCTCATAGGACTCCTTaGGGGCCCTGTACTTTTCTA +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSPHRTP*GPCTFL
Trigger: TAGAAAAGTACAGGGCCCCCAAGGAGTCCTATGAGG...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCACGATTCCAGCATCTCTaGGGGTCCCTAAGCGAGGTT +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPRFQHL*GSLSEV
Trigger: AACCTCGCTTAGGGACCCCCAGAGATGCTGGAATCG...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp TCTCTTCTGTTGGGGTCCCCACTGTTTGGTTTGATCTaGGTCCGAAGCTCCTCTCCATCTTCCTCTGAGGAT +
Preference number: 4 (lower is better)
Translates to: SLLLGSPLFGLI*VRSSSPSSSED
Trigger: ATCCTCAGAGGAAGATGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCATTCGCCAGTGCCTGCTaGATATTTGGCCTCTTCACA +
Preference number: 4 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSFASAC*IFGLFT
Trigger: TGTGAAGAGGCCAAATATTCAGCAGGCACTGGCGAA...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAACTGAGATGACTATCTaGGGTGGCCACAGAGGTGGT +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPTEMTI*GGHRGG
Trigger: ACCACCTCTGTGGCCACCTCAGATAGTCATCTCAGT...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTAGAGATGTGAGGGACTaGAGGATGTCACCACTGGTG +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSRDVRD*RMSPLV
Trigger: CACCAGTGGTGACATCCTTCAGTCCCTCACATCTCT...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCCTAGACTTCACACAATaGCAGTCCAGTCAATTTCTG +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGLDFTQ*QSSQFL
Trigger: CAGAAATTGACTGGACTGTCATTGTGTGAAGTCTAG...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCCTCCCAGTACCGCTCTaGATTATTCTTACTGTGCCT +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTLPVPL*IILTVP
Trigger: AGGCACAGTAAGAATAATTCAGAGCGGTACTGGGAG...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTGGATCCCTGCGCAGTTaGTCAAACCAAAGTCAATCA +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSGSLRS*SNQSQS
Trigger: TGATTGACTTTGGTTTGAGCAACTGCGCAGGGATCC...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATGAAGGATCAGGGCTATaGCTTAAACAACAGGATGAA +
Preference number: 4 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDEGSGL*LKQQDE
Trigger: TTCATCCTGTTGTTTAAGGCATAGCCCTGATCCTTC...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCTGTAACCGTGTTCTATaGCTTCCAGAAGGATCAGGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTCNRVL*LPEGSG
Trigger: CCCTGATCCTTCTGGAAGGCATAGAACACGGTTACA...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCAGAATGATTCAGAACTaGCTCTCTGCCTTCTGGCAA +
Preference number: 4 (lower is better)
Translates to: GSGLCLKQQDEHRATETCRMIQN*LSAFWQ
Trigger: TTGCCAGAAGGCAGAGAGGCAGTTCTGAATCATTCT...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCACCAGCAAGTTCCCAATaGGCAGGTATACACCCTGCA +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPPASSQ*AGIHPA
Trigger: TGCAGGGTGTATACCTGCGCATTGGGAACTTGCTGG...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTTGCTCTCAAGGAAAATaGATCAGGGGTTCCAGCAAG +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSCSQGK*IRGSSK
Trigger: CTTGCTGGAACCCCTGATGCATTTTCCTTGAGAGCA...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCAAGGCGGAAGTACCCCTaGTCTCAAGGAAAATGCATC +
Preference number: 4 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSRRKYP*SQGKCI
Trigger: GATGCATTTTCCTTGAGAGCAGGGGTACTTCCGCCT...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCGTCGAACAGACAACATaGTTCGGACTTACCAAAGGG +
Preference number: 4 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTVEQTT*FGLTKG
Trigger: CCCTTTGGTAAGTCCGAAGCATGTTGTCTGTTCGAC...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGGTCTTTCTCTTCTGTTaGGGTCCCCACTGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLVFLFC*GPHCLV
Trigger: AACCAAACAGTGGGGACCCCAACAGAAGAGAAAGAC...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCTATCAAAATCTTGCTTaGGAAATGAGTGTCTCCTTC +
Preference number: 4 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVYQNLA*EMSVSF
Trigger: GAAGGAGACACTCATTTCCCAAGCAAGATTTTGATA...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAGGCCATTCTGTAACTaGTCTCCTACACTAACCCCT +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNRPFCN*SPTLTP
Trigger: AGGGGTTAGTGTAGGAGACCAGTTACAGAATGGCCT...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGATGACTATCTGAGGTaGCCACAGAGGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPDDYLR*PQRWSL
Trigger: CAGAGACCACCTCTGTGGCCACCTCAGATAGTCATC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCAGTCCCCGAAGTAGCTaGGACTACAGGCACGTACCA +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSSPRSS*DYRHVP
Trigger: TGGTACGTGCCTGTAGTCCCAGCTACTTCGGGGACT...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGTGGAGCCGTTGCAGCTaGAAACCGTCTTTAGAAAAG +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLWSRCS*KPSLEK
Trigger: CTTTTCTAAAGACGGTTTCCAGCTGCAACGGCTCCA...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGCTCATCTGGGGACTCTaGGGTGTCCTTAAACCATCT +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQLIWGL*GVLKPS
Trigger: AGATGGTTTAAGGACACCCCAGAGTCCCCAGATGAG...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAGATGTGGATACATGTaGAGGGGGACTGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNRCGYM*RGTANP
Trigger: AGGATTTGCAGTCCCCCTCCACATGTATCCACATCT...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp AGTCTTTCTCTTCTGTTGGGGTCCCCACTGTTTGGTTaGATCTTGGTCCGAAGCTCCTCTCCATCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: SLSLLLGSPLFG*ILVRSSSPSSS
Trigger: AGAGGAAGATGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGCTCTACGGCAGAGATaGGCTGTCGGATGTATCTGC +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRALRQR*AVGCIC
Trigger: GCAGATACATCCGACAGCTCATCTCTGCCGTAGAGC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATTGGAGAATGGTCGATaGAGAAAATCCCCTCTTTTT +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKLENGR*RKSPLF
Trigger: AAAAAGAGGGGATTTTCTTCATCGACCATTCTCCAA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAGGGCTTTGGTGTTCTaGATCTGTGTCATAAGCGAG +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQRALVF*ICVISE
Trigger: CTCGCTTATGACACAGATTCAGAACACCAAAGCCCT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GTAGTTGAGTCCTGTGAACAATGGCAGGATGTCCTTTCAAGATGCCCGGTGACAAGGGCTTTGGTGTTCTaGATCTGTGTCATAAGCGAG +
Preference number: 4 (lower is better)
Translates to: VVESCEQWQDVLSRCPVTRALVF*ICVISE
Trigger: CTCGCTTATGACACAGATTCAGAACACCAAAGCCCT...TGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACAGGACTCAACTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR TCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCATTCTGCGAGCCAAGCTaGCCGGGGAGTTCAGAATCC +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPFCEPS*PGSSES
Trigger: GGATTCTGAACTCCCCGGTCAGCTTGGCTCGCAGAA...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGTTAGCACTGGGTCTTaGCCCCATCGGCCATGTCAA +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRVSTGS*PHRPCQ
Trigger: TTGACATGGCCGATGGGGTCAAGACCCAGTGCTAAC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGTTCTGTGGGCAGCTTaGAATCAGCATCGCACAGAG +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSVLWAA*NQHRTE
Trigger: CTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAAC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGGCTGCAGTGAACTGTaGTTGTGCCACTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRGCSEL*LCHCTP
Trigger: TGGAGTGCAGTGGCACAATCACAGTTCACTGCAGCC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTTGCACAGTGAACAGTaGGCTTCTCCACTTTCTAGC +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQLHSEQ*ASPLSS
Trigger: GCTAGAAAGTGGAGAAGCTCACTGTTCACTGTGCAA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp GCGTGTCAGGGGGACCAGGTATCAAGCAAGTTCATGTCTTGCTGTCTCACACTTGCTAGAGCAATGTTTTaGTTGACACCACATGTGTGG +
Preference number: 4 (lower is better)
Translates to: ACQGDQVSSKFMSCCLTLARAMF*LTPHVW
Trigger: CCACACATGTGGTGTCAATCAAAACATTGCTCTAGC...AAGTGTGAGACAGCAAGACATGAACTTGCTTGATACCTGGTCCCCCTGACACGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR GCA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCTTTTGCGGAAAATATTaGGGCAGCCAAAGGAATCTT +
Preference number: 4 (lower is better)
Translates to: INLSSESRSPMATRSVSGFCGKY*GSQRNL
Trigger: AAGATTCCTTTGGCTGCCGCAATATTTTCCGCAAAA...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTTGGAATCTGAGGTTTTaGGGAAAATATTGCGGCAGC +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSWNLRF*GKYCGS
Trigger: GCTGCCGCAATATTTTCCGCAAAACCTCAGATTCCA...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTTATCCAGGGGTTTGCTaGTTACTTGGGAAGTCAACT +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSYPGVC*LLGKST
Trigger: AGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGATA...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTTTATCCTGCACGGCATaGAATTCAAGATCTCGTGTC +
Preference number: 4 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSLSCTA*NSRSRV
Trigger: GACACGAGATCTTGAATTCCATGCCGTGCAGGATAA...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTCCTCGAAGAAGAAACTaGCCTGTATCTGAACAGGTT +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSPRRRN*PVSEQV
Trigger: AACCTGTTCAGATACAGGCCAGTTTCTTCTTCGAGG...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGGCACAGACACAATACTaGAGACACATCTTTGGTTCG +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLAQTQY*RHIFGS
Trigger: CGAACCAAAGATGTGTCTCCAGTATTGTGTCTGTGC...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATCTAGATTTGTGTTTTaGGATCCTTGGACTGAGATG +
Preference number: 4 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKSRFVF*DPWTEM
Trigger: CATCTCAGTCCAAGGATCCCAAAACACAAATCTAGA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAAGTCCAGGTCGCCAATaGCAACGCGGTCAGTTAGCG +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPSPGRQ*QRGQLA
Trigger: CGCTAACTGACCGCGTTGCCATTGGCGACCTGGACT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp GAAAACACAACGTGGACTGAACCCTGTTTGAGGAGCTaGGCTTTCCTCGAAGAAGAAACTGGCCTGTATCTG +
Preference number: 4 (lower is better)
Translates to: ENTTWTEPCLRS*AFLEEETGLYL
Trigger: CAGATACAGGCCAGTTTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAGGGTTCAGTCCACGTTGTGTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCAGAAACGTGGCCTGGATaGATGACTGTGATATTGTTC +
Preference number: 4 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSETWPG*MTVILF
Trigger: GAACAATATCACAGTCATTCATCCAGGCCACGTTTC...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGATTCTTCTCACCAATaGCTGCACCCTGTCAAGTGC +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSDSSHQ*LHPVKC
Trigger: GCACTTGACAGGGTGCAGTCATTGGTGAGAAGAATC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGGGGGACTGCAAATCCTaGAATGCTCCTCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRGDCKS*NAPHLL
Trigger: GAGAAGGTGAGGAGCATTTCAGGATTTGCAGTCCCC...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
48% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGCATAGATTTGTCAGGTaGTCACACACACACACACAC +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQHRFVR*SHTHTH
Trigger: GTGTGTGTGTGTGTGTGAGCACCTGACAAATCTATG...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGAACTGGCCCAGAAAATaGCCCCCAATGCAATTCCCG +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRNWPRK*PPMQFP
Trigger: CGGGAATTGCATTGGGGGGCATTTTCTGGGCCAGTT...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTGCAAGACCTAGTCCCTaGAGGAACTTCAGAAATACC +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSARPSP*RNFRNT
Trigger: GGTATTTCTGAAGTTCCTGCAGGGACTAGGTCTTGC...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGCGTCCCGGTCAACATaGCATACATGTTCACACCTA +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSASRST*HTCSHL
Trigger: TAGGTGTGAACATGTATGCCATGTTGACCGGGACGC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCTGCCTGCTGAATATTTaGCCTCTTCACAGGATCCGG +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSCLLNI*PLHRIR
Trigger: CCGGATCCTGTGAAGAGGCCAAATATTCAGCAGGCA...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAGACAGCACTTCTACGTaGTCGTCGCGATCCACAGAC +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPDSTST*SSRSTD
Trigger: GTCTGTGGATCGCGACGACCACGTAGAAGTGCTGTC...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGCAGGCCCTCCTCTTTTaGGGGGCTGTTCTTATCTTC +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRQALLF*GAVLIF
Trigger: GAAGATAAGAACAGCCCCCCAAAAGAGGAGGGCCTG...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGTTGCAACCAGATGTCTaGAAAGCTCCCTTAACAGAA +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLLQPDV*KAPLTE
Trigger: TTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAA...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCTATCCTTCCAAAATTaGTTGCCCCAAATGCCTCAT +
Preference number: 4 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLLSFQN*LPQMPH
Trigger: ATGAGGCATTTGGGGCAACCAATTTTGGAAGGATAG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGTGGAGAGCACAGTGTTaGTCACGTCGCTGTTCTTGT +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRWRAQC*SRRCSC
Trigger: ACAAGAACAGCGACGTGATCAACACTGTGCTCTCCA...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGATGTCAGATTTCCCTaGCAAATAGCGCTCCAGTTT +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPDVRFP*QIALQF
Trigger: AAACTGGAGCGCTATTTGTCAGGGAAATCTGACATC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGCTGTTCTTATCTTCGTaGGCAAAAGAGACCAGAGTT +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQLFLSS*AKETRV
Trigger: AACTCTGGTCTCTTTTGCTCACGAAGATAAGAACAG...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACCCCACTGTTTGGTTTaGTCTTGGTCCGAAGCTCCT +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPPHCLV*SWSEAP
Trigger: AGGAGCTTCGGACCAAGATCAAACCAAACAGTGGGG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAACTCTTCCCCTATCCATaGCCAAGGCCTCCTACAAGG +
Preference number: 4 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQLFPYP*PRPPTR
Trigger: CCTTGTAGGAGGCCTTGGTCATGGATAGGGGAAGAG...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACCTTCAGGTAATCCCTaGTATGAAAGGCAGGGCTGC +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPPSGNP*YERQGC
Trigger: GCAGCCCTGCCTTTCATAGCAGGGATTACCTGAAGG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTCGCCATCTGAGTTATaGTCTGAATTGTCACAATCA +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSSPSEL*SELSQS
Trigger: TGATTGTGACAATTCAGAGCATAACTCAGATGGCGA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAGTCACGTTCATAACTaGCATTCTTTGTGTGCCATT +
Preference number: 4 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNSHVHN*HSLCAI
Trigger: AATGGCACACAAAGAATGGCAGTTATGAACGTGACT...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGAAGAAGCCACACAATTaGAATCTGAGGTTTTGCGGA +
Preference number: 4 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQKKPHN*NLRFCG
Trigger: TCCGCAAAACCTCAGATTCCAATTGTGTGGCTTCTT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACTGAATGATAGGAATTaGCTGCCCCTGGAGCCAACC +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPLNDRN*LPLEPT
Trigger: GGTTGGCTCCAGGGGCAGCCAATTCCTATCATTCAG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAATCTTGCTTGGGAAATaGGTGTCTCCTTCAGTCTTT +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPILLGK*VSPSVF
Trigger: AAAGACTGAAGGAGACACTCATTTCCCAAGCAAGAT...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGAAACACAACGTGGACTaGACCCTGTTTGAGGAGCTT +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRKHNVD*TLFEEL
Trigger: AAGCTCCTCAAACAGGGTTCAGTCCACGTTGTGTTT...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCATTGGGATCCTTGGACTaGGATGACTATCTGAGGTGG +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPLGSLD*DDYLRW
Trigger: CCACCTCAGATAGTCATCTCAGTCCAAGGATCCCAA...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAAGCTCTGTCAGAGATGTaGGGGACTGAAGGATGTCAC +
Preference number: 4 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQALSEM*GTEGCH
Trigger: GTGACATCCTTCAGTCCCTCACATCTCTGACAGAGC...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCACTGCCATTCTTTGTGTaGCATTTTCAGAGTCTCCAA +
Preference number: 4 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPLPFFV*HFQSLQ
Trigger: TTGGAGACTCTGAAAATGGCACACAAAGAATGGCAG...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR GCA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTTACTACTCAGGAAATaGACTCCCTTCATTGAAAAG +
Preference number: 4 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSLLLRK*TPFIEK
Trigger: CTTTTCAATGAAGGGAGTGCATTTCCTGAGTAGTAA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAAGCCGCAGGTTTTTGGTaGCATAGGTGTCCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQAAGFW*HRCPFW
Trigger: CCAAAAAGGACACCTATGTCACCAAAAACCTGCGGC...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAAAAATATCAAGGAGCTaGGTGATATTGGGGTGGCGG +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPKISRS*VILGWR
Trigger: CCGCCACCCCAATATCACTCAGCTCCTTGATATTTT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACCTTCAGGAGGGCTTTaGTGTTCTGAATCTGTGTCA +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPPSGGL*CSESVS
Trigger: TGACACAGATTCAGAACACCAAAGCCCTCCTGAAGG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGTGTGAAAACACAACGTaGACTGAACCCTGTTTGAGG +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRCENTT*TEPCLR
Trigger: CCTCAAACAGGGTTCAGTCCACGTTGTGTTTTCACA...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
3UTR CAA 72 bp AGACACAATACTGGAGACACATCTTTGGTTCGATCCTaGGAGAAAGGTGTGAAAACACAACGTGGACTGAAC +
Preference number: 4 (lower is better)
Translates to: RHNTGDTSLVRS*EKGVKTQRGLN
Trigger: GTTCAGTCCACGTTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATTGTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTCACACAATTGGAATCTaGGGTTTTGCGGAAAATATT +
Preference number: 4 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSHTIGI*GFAENI
Trigger: AATATTTTCCGCAAAACCTCAGATTCCAATTGTGTG...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGACATGTTCACACCTATaGACCAGACATCGATTTTGG +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRTCSHL*TRHRFW
Trigger: CCAAAATCGATGTCTGGTCCATAGGTGTGAACATGT...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCTCTTGTCCAACTTCTTaGAGAATGGTCGATGAAGAA +
Preference number: 4 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSSCPTS*RMVDEE
Trigger: TTCTTCATCGACCATTCTCCAAGAAGTTGGACAAGA...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGAGCTTCAAGAGTGGATaGGACAAACAGCATAAGGTT +
Preference number: 4 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRSFKSG*DKQHKV
Trigger: AACCTTATGCTGTTTGTCCCATCCACTCTTGAAGCT...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACTCTCTTCTTATCAATaGCTTTTATGGCCACCTTCT +
Preference number: 4 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPLSSYQ*LLWPPS
Trigger: AGAAGGTGGCCATAAAAGTCATTGATAAGAAGAGAG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CCA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAAAAAAGAGACCAGAGTTaGATGCAAAGGAGTATGGAG +
Preference number: 4 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQKRDQS*MQRSME
Trigger: CTCCATACTCCTTTGCATCCAACTCTGGTCTCTTTT...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
41% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR TCA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAATTTTTCACCTGTAAATaGTACAGCTTCCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQFFTCK*YSFLCH
Trigger: ATGGCACAGGAAGCTGTATCATTTACAGGTGAAAAA...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 90 bp CTCCGCAGCCTCCGCCTCGCCGCCGCCGTCTGGCCCGCACGGGCTTaGGTCGGGCTCCCGCGATCGCTCCTAGCCGTGCGCTGGGCGGCC +
Preference number: 5 (lower is better)
Translates to: LRSLRLAAAVWPARA*VGLPRSLLAVRWAA
Trigger: GGCCGCCCAGCGCACGGCTAGGAGCGATCGCGGGAGCCCGACCCAAGCCCGTGCGGGCCAGACGGCGGCGGCGAGGCGGAGGCTGCGGAG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS GCA 90 bp GTGCGCTGGGCGGCCGCTCCCGCCGGAGAGAAGCGCGCGGCGGGCTaGCGGCGCCCTCTGGAAGGCAGCAGAAGAAAGCCCCATTCAGTT +
Preference number: 5 (lower is better)
Translates to: VRWAAAPAGEKRAAG*RRPLEGSRRKPHSV
Trigger: AACTGAATGGGGCTTTCTTCTGCTGCCTTCCAGAGGGCGCCGGCAGCCCGCCGCGCGCTTCTCTCCGGCGGGAGCGGCCGCCCAGCGCAC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp CGCGCACCTTGGCAAAGGAGCCCTCGCCCAGCTTCCTGCTGCCGATaGGGTAGTTGCCCACGCGCTTGTGGTGCTGGAAGTCGCGGAGCC +
Preference number: 5 (lower is better)
Translates to: RAPWQRSPRPASCCR*GSCPRACGAGSRGA
Trigger: GGCTCCGCGACTTCCAGCACCACAAGCGCGTGGGCAACTACCTCATCGGCAGCAGGAAGCTGGGCGAGGGCTCCTTTGCCAAGGTGCGCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp CTCTGTGGACCACCCCGGCCCGGTGCAGGTGCTCTACGGCAGAGATaGGCTGTCGGATGTATCTGCGGGCTTCGGACTCCTCCAGCCGCT +
Preference number: 5 (lower is better)
Translates to: LCGPPRPGAGALRQR*AVGCICGLRTPPAA
Trigger: AGCGGCTGGAGGAGTCCGAAGCCCGCAGATACATCCGACAGCTCATCTCTGCCGTAGAGCACCTGCACCGGGCCGGGGTGGTCCACAGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS CCA 90 bp CCGCTCCCGCCGGAGAGAAGCGCGCGGCGGGCTGCCGGCGCCCTCTaGAAGGCAGCAGAAGAAAGCCCCATTCAGTTTGAATTTGCAGAA +
Preference number: 5 (lower is better)
Translates to: PLPPERSARRAAGAL*KAAEESPIQFEFAE
Trigger: TTCTGCAAATTCAAACTGAATGGGGCTTTCTTCTGCTGCCTTCCAGAGGGCGCCGGCAGCCCGCCGCGCGCTTCTCTCCGGCGGGAGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CGGCCTCCCACCGCGTGGAAGGGAAGCCTTGGGCTGTGTCCACACACCATCTTGGAGCCTGAGGGCTGTTaGTGCGAGGGCAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: RPPTAWKGSLGLCPHTILEPEGC*CEGRFL
Trigger: CAAGAACCTGCCCTCGCACAAACAGCCCTCAGGCTC...CAAGATGGTGTGTGGACACAGCCCAAGGCTTCCCTTCCACGCGGTGGGAGGCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CAA 90 bp CCCACCGCGTGGAAGGGAAGCCTTGGGCTGTGTCCACACACCATCTTGTGCAGGTCGGGGAAGCTGGACTaGGAGGCCTTCCGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: PTAWKGSLGLCPHTILCRSGKLD*EAFRSF
Trigger: GAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGA...CCTGCACAAGATGGTGTGTGGACACAGCCCAAGGCTTCCCTTCCACGCGGTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS GCA 90 bp CAGCACGACGCTCGGGCTCAGATCTTCCAGAGAAATCCTGCGAGGTaGAGAGAGAGAGGACCAGTCACCCCTGCACTTCACGGAGAGCCC +
Preference number: 5 (lower is better)
Translates to: QHDARAQIFQRNPAR*RERGPVTPALHGEP
Trigger: GGGCTCTCCGTGAAGTGCAGGGGTGACTGGTCCTCTCTCTCTGCACCTCGCAGGATTTCTCTGGAAGATCTGAGCCCGAGCGTCGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000465574.1
CDS-3UTR CAA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGGCTGCATGGGGCCATaGCTGGGAACCGGAGGTGGG +
Preference number: 5 (lower is better)
Translates to: INLSSESRSPMATRSVSGGCMGP*LGTGGG
Trigger: CCCACCTCCGGTTCCCAGCAATGGCCCCATGCAGCC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp GACCCGGGGACAGCGTCCTCTCGCTGGAATTTCTGCGAGCCAAGCTaGCCGGGGAGTTCAGAATCCTGTAGTGATGAGAGGGAGACAGCA +
Preference number: 5 (lower is better)
Translates to: DPGTASSRWNFCEPS*PGSSESCSDERETA
Trigger: TGCTGTCTCCCTCTCATCACTACAGGATTCTGAACTCCCCGGTCAGCTTGGCTCGCAGAAATTCCAGCGAGAGGACGCTGTCCCCGGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp GGCAGGCTGGCCTCCAGGGGCCTATCTGCAGATGGCTGCAGACTCTaGTGGCGCTTCCTTAACATCTGTCCGATGCCCATCATAGGGAAC +
Preference number: 5 (lower is better)
Translates to: GRLASRGLSADGCRL*WRFLNICPMPIIGN
Trigger: GTTCCCTATGATGGGCATCGGACAGATGTTAAGGAAGCGCCATCAGAGTCTGCAGCCATCTGCAGATAGGCCCCTGGAGGCCAGCCTGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS GCA 90 bp TTCTCTATCTTCAAGTCTCTGTGGACCACCCCGGCCCGGTGCAGGTaGTCTACGGCAGAGATGAGCTGTCGGATGTATCTGCGGGCTTCG +
Preference number: 5 (lower is better)
Translates to: FSIFKSLWTTPARCR*STAEMSCRMYLRAS
Trigger: CGAAGCCCGCAGATACATCCGACAGCTCATCTCTGCCGTAGAGCACCTGCACCGGGCCGGGGTGGTCCACAGAGACTTGAAGATAGAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS CCA 90 bp CAGAGTTGGATGCAAAGGAGTATGGAGAGGCGACATGCTTCCGGATaGCAGACCCGGGGACAGCGTCCTCTCGCTGGAATTTCTGCGAGC +
Preference number: 5 (lower is better)
Translates to: QSWMQRSMERRHASG*QTRGQRPLAGISAS
Trigger: GCTCGCAGAAATTCCAGCGAGAGGACGCTGTCCCCGGGTCTGCCATCCGGAAGCATGTCGCCTCTCCATACTCCTTTGCATCCAACTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TTGCTGTCTCACACTTCGTGGAGTGGGGAGGCGGGGCATGCGGCCCAAGCACACTGCGAGGGCAGGTTCTaGTCCAACTTCTTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: LLSHTSWSGEAGHAAQAHCEGRF*SNFLEN
Trigger: ATTCTCCAAGAAGTTGGACAAGAACCTGCCCTCGCA...GTGTGCTTGGGCCGCATGCCCCGCCTCCCCACTCCACGAAGTGTGAGACAGCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CAA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGCAGGGCCACCGAGACTaGCCCTGCCTGTGGGCCACA +
Preference number: 5 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLQGHRD*PCLWAT
Trigger: TGTGGCCCACAGGCAGGGCAAGTCTCGGTGGCCCTG...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp CTGGACTTGGAGGCCTTCCGGTCCTTCAGGAGGGCTTTGGTGTTCTaGATCTGTGTCATAAGCGAGCCTGAGGGCTGTTTGTGCGAGGGC +
Preference number: 5 (lower is better)
Translates to: LDLEAFRSFRRALVF*ICVISEPEGCLCEG
Trigger: GCCCTCGCACAAACAGCCCTCAGGCTCGCTTATGACACAGATTCAGAACACCAAAGCCCTCCTGAAGGACCGGAAGGCCTCCAAGTCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000439107.1
CDS GCA 90 bp CAAAAGAGACCAGAGTTGGATGCAAAGGAGTATGGAGAGGCGACATaGTTCCGGATGGCAGACCCGGGGACAGCGTCCTCTCGCTGGAAT +
Preference number: 5 (lower is better)
Translates to: QKRPELDAKEYGEAT*FRMADPGTASSRWN
Trigger: ATTCCAGCGAGAGGACGCTGTCCCCGGGTCTGCCATCCGGAAGCATGTCGCCTCTCCATACTCCTTTGCATCCAACTCTGGTCTCTTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCTCGGGGAAGCTGGACTaGGAGGCCTTCCGGTCCTTC +
Preference number: 5 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTSGKLD*EAFRSF
Trigger: GAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGA...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GCTCTGAGCCGCACCAGTTCTGTGGGCAGCTTGAAATCAGCATCGCACAGAGATATCAGGGGGTCTTCCTaGTGGGGGATGCCAGTGCTT +
Preference number: 5 (lower is better)
Translates to: ALSRTSSVGSLKSASHRDIRGSS*WGMPVL
Trigger: AAGCACTGGCATCCCCCACAAGGAAGACCCCCTGAT...ATCTCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACTGGTGCGGCTCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp AGTAGATGGCCAGGATGTGGCAGGCGCGGTTGGAGAGCACAGTGTTaGTCACGTCGCTGTTCTTGTAACCCAGCTTCTCGGTCATGTGCA +
Preference number: 5 (lower is better)
Translates to: SRWPGCGRRGWRAQC*SRRCSCNPASRSCA
Trigger: TGCACATGACCGAGAAGCTGGGTTACAAGAACAGCGACGTGATCAACACTGTGCTCTCCAACCGCGCCTGCCACATCCTGGCCATCTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000465574.1
CDS-3UTR CAA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCATCTTGTGCATCAGGTaGCCCCCAGGGCACAGCTCC +
Preference number: 5 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTILCIR*PPGHSS
Trigger: GGAGCTGTGCCCTGGGGGCAACCTGATGCACAAGAT...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACGAGCCTGAGGGCTGTTaGTGCGAGGGCAGGTTCTTG +
Preference number: 5 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNEPEGC*CEGRFL
Trigger: CAAGAACCTGCCCTCGCACAAACAGCCCTCAGGCTC...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCTGCACCGGTCAAAAGTaGAAGACTCCAGGCCATTCT +
Preference number: 5 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVCTGQK*KTPGHS
Trigger: AGAATGGCCTGGAGTCTTCAACTTTTGACCGGTGCA...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 90 bp CCGGTTTCTTCACAATCCTCGGGGTCCTGGGCGGTGGCACGGGGATaGACTCCATGGAAGAAGAAGCCACACAATTGGAATCTGAGGTTT +
Preference number: 5 (lower is better)
Translates to: PVSSQSSGSWAVARG*TPWKKKPHNWNLRF
Trigger: AAACCTCAGATTCCAATTGTGTGGCTTCTTCTTCCATGGAGTTCATCCCCGTGCCACCGCCCAGGACCCCGAGGATTGTGAAGAAACCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCAAGCCCCTCGCGCACCTaGGCAAAGGAGCCCTCGCCC +
Preference number: 5 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPSPSRT*AKEPSP
Trigger: GGGCGAGGGCTCCTTTGCCAAGGTGCGCGAGGGGCT...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTATGTGGCAGGCGCGGTaGGAGAGCACAGTGTTGATC +
Preference number: 5 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSMWQAR*ESTVLI
Trigger: GATCAACACTGTGCTCTCCAACCGCGCCTGCCACAT...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCGCTCCACGCGAGGCCTaGGAGTGCTCACACCCTGAC +
Preference number: 5 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSAPREA*ECSHPD
Trigger: GTCAGGGTGTGAGCACTCCAAGGCCTCGCGTGGAGC...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATCCCCACTGTTTGGTTaGATCTTGGTCCGAAGCTCC +
Preference number: 5 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKSPLFG*ILVRSS
Trigger: GGAGCTTCGGACCAAGATCAAACCAAACAGTGGGGA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS GCA 90 bp GGGCACTTTGCCCGTGTAATTCTCATTAAGCCAGCGATTCGCCAGTaGCTGCTGAATATTTGGCCTCTTCACAGGATCCGGTTCCAGGAG +
Preference number: 5 (lower is better)
Translates to: GHFARVILIKPAIRQ*LLNIWPLHRIRFQE
Trigger: CTCCTGGAACCGGATCCTGTGAAGAGGCCAAATATTCAGCAGGCACTGGCGAATCGCTGGCTTAATGAGAATTACACGGGCAAAGTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAATGCGAGGGCAGGTTCTaGTCCAACTTCTTGGAGAAT +
Preference number: 5 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKCEGRF*SNFLEN
Trigger: ATTCTCCAAGAAGTTGGACAAGAACCTGCCCTCGCA...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GCTCCAGACCAGCTCAAATGCCAGCTCATCTGGGGACTCTGGGGTGTCCTTAAACCCTGTTTGAGGAGCTaGGCTTTCCTCGAAGAAGAA +
Preference number: 5 (lower is better)
Translates to: APDQLKCQLIWGLWGVLKPCLRS*AFLEEE
Trigger: TTCTTCTTCGAGGAAAGCCAAGCTCCTCAAACAGGG...TTTAAGGACACCCCAGAGTCCCCAGATGAGCTGGCATTTGAGCTGGTCTGGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CATGTGTGGGGATCCAGGTCACACCATGGAAGATGTGGAGAGTCCCTGGCCTTGAAGCAAGTTCATGTCTaGCTGTCTCACACTTCGTGG +
Preference number: 5 (lower is better)
Translates to: HVWGSRSHHGRCGESLALKQVHV*LSHTSW
Trigger: CCACGAAGTGTGAGACAGCAAGACATGAACTTGCTT...CAAGGCCAGGGACTCTCCACATCTTCCATGGTGTGACCTGGATCCCCACACATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS TCA 90 bp CTTCAGGAGGGCTTTGGTGTTCTGAATCTGTGTCATAAGCGAGCCTaGGGGCTGTTTGTGCGAGGGCAGGTTCTTGTCCAACTTCTTGGA +
Preference number: 5 (lower is better)
Translates to: LQEGFGVLNLCHKRA*GLFVRGQVLVQLLG
Trigger: TCCAAGAAGTTGGACAAGAACCTGCCCTCGCACAAACAGCCCTCAGGCTCGCTTATGACACAGATTCAGAACACCAAAGCCCTCCTGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270112.7
ENST00000439107.1
ENST00000465574.1
CDS-3UTR CAA 90 bp GGATCAGGGCTATGCCTTAAACAACAGGATGAACACAGGGCCACCGAGACTTGCAGTTCTGTGGGCAGCTaGAAATCAGCATCGCACAGA +
Preference number: 5 (lower is better)
Translates to: GSGLCLKQQDEHRATETCSSVGS*KSASHR
Trigger: TCTGTGCGATGCTGATTTCAAGCTGCCCACAGAACT...GCAAGTCTCGGTGGCCCTGTGTTCATCCTGTTGTTTAAGGCATAGCCCTGATCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGTGGACTGAACCCTGTTaGAGGAGCTTGGCTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLWTEPC*RSLAFL
Trigger: GAGGAAAGCCAAGCTCCTCAAACAGGGTTCAGTCCA...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTGCAGTAGCATGATCTaGGCTCACTGCAGCCTCGAC +
Preference number: 5 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQCSSMI*AHCSLD
Trigger: GTCGAGGCTGCAGTGAGCCAAGATCATGCTACTGCA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTTGCAAAGTGGAGCCGTaGCAGCTGGAAACCGTCTTT +
Preference number: 5 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSCKVEP*QLETVF
Trigger: AAAGACGGTTTCCAGCTGCAACGGCTCCACTTTGCA...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTAGGCTATCCAGGGGTTaGCTGCTTACTTGGGAAGTC +
Preference number: 5 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSRLSRG*LLTWEV
Trigger: GACTTCCCAAGTAAGCAGCAAACCCCTGGATAGCCT...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 90 bp GTAATTCTCATTAAGCCAGCGATTCGCCAGTGCCTGCTGAATATTTaGCCTCTTCACAGGATCCGGTTCCAGGAGAGAGCGCAGGAAACT +
Preference number: 5 (lower is better)
Translates to: VILIKPAIRQCLLNI*PLHRIRFQERAQET
Trigger: AGTTTCCTGCGCTCTCTCCTGGAACCGGATCCTGTGAAGAGGCCAAATATTCAGCAGGCACTGGCGAATCGCTGGCTTAATGAGAATTAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCGTTTTGCGGAAAATATaGCGGCAGCCAAAGGAATCT +
Preference number: 5 (lower is better)
Translates to: INLSSESRSPMATRSVSGVLRKI*RQPKES
Trigger: AGATTCCTTTGGCTGCCGCAATATTTTCCGCAAAAC...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GTGGGCAGCTTGAAATCAGCATCGCACAGAGATAATGCTGCCTTCTCGCCATCTAGATGGGAGGATCACTaGAATCTGGAGAGGTTGAGG +
Preference number: 5 (lower is better)
Translates to: VGSLKSASHRDNAAFSPSRWEDH*NLERLR
Trigger: CCTCAACCTCTCCAGATTCAAGTGATCCTCCCATCT...AGATGGCGAGAAGGCAGCATTATCTCTGTGCGATGCTGATTTCAAGCTGCCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCAGTGATGACATGAAATaGAACCAACTCCCAGTACCG +
Preference number: 5 (lower is better)
Translates to: INLSSESRSPMATRSVSGSDDMK*NQLPVP
Trigger: CGGTACTGGGAGTTGGTTCAATTTCATGTCATCACT...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS GCA 90 bp GCTGCCACACTGTGTGCTGAACGGATCCGAGTAACCCAGGATCCCTaGGCAGTTGCTCAAACCAAAGTCAATCAGCTTGATATTATTGTC +
Preference number: 5 (lower is better)
Translates to: AATLCAERIRVTQDP*AVAQTKVNQLDIIV
Trigger: GACAATAATATCAAGCTGATTGACTTTGGTTTGAGCAACTGCGCAGGGATCCTGGGTTACTCGGATCCGTTCAGCACACAGTGTGGCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGGACCAGACATCGATTTaGGGGCCGTATTTCTTCCTG +
Preference number: 5 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQDQTSI*GPYFFL
Trigger: CAGGAAGAAATACGGCCCCAAAATCGATGTCTGGTC...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGTGCCTGCTGAATATTaGGCCTCTTCACAGGATCCG +
Preference number: 5 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPVPAEY*ASSQDP
Trigger: CGGATCCTGTGAAGAGGCCAAATATTCAGCAGGCAC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTCAGCCAAAGGAATCTTaGTCGGGGAAGCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSQPKES*SGKLDL
Trigger: CAAGTCCAGCTTCCCCGACAAAGATTCCTTTGGCTG...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TTCCAGCATCTCTGGGGGTCCCTAAGCGAGGTTGGGTTGTGCAGGCTTTGGGTCATATCCTATTTGTCTTaGCAACCAGATGTCTGGAAA +
Preference number: 5 (lower is better)
Translates to: FQHLWGSLSEVGLCRLWVISYLS*QPDVWK
Trigger: TTTCCAGACATCTGGTTGCAAAGACAAATAGGATAT...GACCCAAAGCCTGCACAACCCAACCTCGCTTAGGGACCCCCAGAGATGCTGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AATAAGAAGCACGTTCTCCACAAGCTAACGGCAAGGCGGAAGTACCCCTGCTCTCAAAAGAGACCAGAGTaGGATGCAAAGGAGTATGGA +
Preference number: 5 (lower is better)
Translates to: NKKHVLHKLTARRKYPCSQKRPE*DAKEYG
Trigger: TCCATACTCCTTTGCATCCAACTCTGGTCTCTTTTG...AGAGCAGGGGTACTTCCGCCTTGCCGTTAGCTTGTGGAGAACGTGCTTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCTGGAGCTCTGTTCAGTaGCTGTTTTCTAGAGATACC +
Preference number: 5 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTWSSVQ*LFSRDT
Trigger: GGTATCTCTAGAAAACAGCAACTGAACAGAGCTCCA...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAAGTCTTTCTCTTCTGTaGGGGTCCCCACTGTTTGGT +
Preference number: 5 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPSLSLL*GSPLFG
Trigger: ACCAAACAGTGGGGACCCCAACAGAAGAGAAAGACT...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATAAACCTGAGTTCAGAGTCCAGGTCGCCAATGGCAACGCGGTCAGTTAGCGGCCTATCAAAATCTTGCTaGGGAAATGAGTGTCTCCTT +
Preference number: 5 (lower is better)
Translates to: INLSSESRSPMATRSVSGLSKSC*GNECLL
Trigger: AAGGAGACACTCATTTCCCAAGCAAGATTTTGATAG...GCCGCTAACTGACCGCGTTGCCATTGGCGACCTGGACTCTGAACTCAGGTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGATGAGTTTGGTGGAATaGCTTCTCATCTCTCCATCC +
Preference number: 5 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLMSLVE*LLISPS
Trigger: GGATGGAGAGATGAGAAGCAATTCCACCAAACTCAT...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGCCAAATGCCTCATTATaGGAACACCACCAGCTCAGA +
Preference number: 5 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQPNASL*EHHQLR
Trigger: TCTGAGCTGGTGGTGTTCCAATAATGAGGCATTTGG...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TTATTTCAAGATCTGGAAGAGCAGTCTGTAGTTGAGTCCTGTGAACAATGGCAGCCTCAGGAGAGTCCTTaGTCGGGGAAGCTGGACTTG +
Preference number: 5 (lower is better)
Translates to: LFQDLEEQSVVESCEQWQPQESP*SGKLDL
Trigger: CAAGTCCAGCTTCCCCGACAAAGGACTCTCCTGAGG...CTGCCATTGTTCACAGGACTCAACTACAGACTGCTCTTCCAGATCTTGAAATAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS-3UTR CAA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCAAGGGGGTTCATTTCTTaGTCTACCATCTTCTGGTAC +
Preference number: 5 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSRGFIS*STIFWY
Trigger: GTACCAGAAGATGGTAGACAAAGAAATGAACCCCCT...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCTTGGAGAGCACAGTGTaGATCACGTCGCTGTTCTTG +
Preference number: 5 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSLESTV*ITSLFL
Trigger: CAAGAACAGCGACGTGATCAACACTGTGCTCTCCAA...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCAGAAGAAGCCACACAATaGGAATCTGAGGTTTTGCGG +
Preference number: 5 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPEEATQ*ESEVLR
Trigger: CCGCAAAACCTCAGATTCCAATTGTGTGGCTTCTTC...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AGTGCCCACAGACGTCAACTCCTAGAGATAACTGTGTGTCACAAAAACATGTCCCTGTTTGGTTTGATCTaGGTCCGAAGCTCCTCTCCA +
Preference number: 5 (lower is better)
Translates to: SAHRRQLLEITVCHKNMSLFGLI*VRSSSP
Trigger: TGGAGAGGAGCTTCGGACCAAGATCAAACCAAACAG...GGACATGTTTTTGTGACACACAGTTATCTCTAGGAGTTGACGTCTGTGGGCACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCACCTCTTTGGTTCGATCCTaGGAGAAAGGTGTGAAAACA +
Preference number: 5 (lower is better)
Translates to: HTHTHTNTADPLSSLPLTSLVRS*EKGVKT
Trigger: TGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGA...GGTGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CACACACACACACACACACAAATACAGCTGATCCCCTTTCATCACTCCCCCTCAACTGGAGACACATCTTaGGTTCGATCCTTGGAGAAA +
Preference number: 5 (lower is better)
Translates to: HTHTHTQIQLIPFHHSPSTGDTS*VRSLEK
Trigger: TTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGT...TGAGGGGGAGTGATGAAAGGGGATCAGCTGTATTTGTGTGTGTGTGTGTGTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp GTCCTTAAACCATCTGGGTCCCTAGTTTTCCCTTCTTCAGAAAGGCTGGGGCTGTCCTTCCAAAATTGGTaGCCCCAAATGCCTCATTAT +
Preference number: 5 (lower is better)
Translates to: VLKPSGSLVFPSSERLGLSFQNW*PQMPHY
Trigger: ATAATGAGGCATTTGGGGCAACCAATTTTGGAAGGA...CAGCCCCAGCCTTTCTGAAGAAGGGAAAACTAGGGACCCAGATGGTTTAAGGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGACCACTCAACTCCAATaGATCCTCAAGTTTGCTCCA +
Preference number: 5 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQTTQLQ*ILKFAP
Trigger: TGGAGCAAACTTGAGGATCAATTGGAGTTGAGTGGT...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATCCAGGGGTTTGCTGCTTACTTGGGAAGTCAACTGAGAAAGACAGAGTTCCCATTGGAATCTGAGGTTTaGCGGAAAATATTGCGGCAG +
Preference number: 5 (lower is better)
Translates to: IQGFAAYLGSQLRKTEFPLESEV*RKILRQ
Trigger: CTGCCGCAATATTTTCCGCAAAACCTCAGATTCCAA...TGGGAACTCTGTCTTTCTCAGTTGACTTCCCAAGTAAGCAGCAAACCCCTGGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACGGCTTGATCTGTTGTaGACATCCCCCTCTGACCAT +
Preference number: 5 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPRLDLL*TSPSDH
Trigger: ATGGTCAGAGGGGGATGTCAACAACAGATCAAGCCG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp AATACTGGAGACACATCTTTGGTTCGATCCTTGGAGAAAGGTGTGAAAACACAATGGGTTGTGCAGGCTTaGGGTCTGTGGATTCAGCTA +
Preference number: 5 (lower is better)
Translates to: NTGDTSLVRSLEKGVKTQWVVQA*GLWIQL
Trigger: TAGCTGAATCCACAGACCCAAAGCCTGCACAACCCA...TTGTGTTTTCACACCTTTCTCCAAGGATCGAACCAAAGATGTGTCTCCAGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TGGCAGCCACTCTCTGATTTCTCTGTGTTCTTTGAGGGAGAAACTCTGCTCCAGTGTGAAAACATGAGTTaGGTGGAATTGCTTCTCATC +
Preference number: 5 (lower is better)
Translates to: WQPLSDFSVFFEGETLLQCENMS*VELLLI
Trigger: GATGAGAAGCAATTCCACCAAACTCATGTTTTCACA...CTGGAGCAGAGTTTCTCCCTCAAAGAACACAGAGAAATCAGAGAGTGGCTGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCACATGTGCAGCTGTTCTaGAAGCCTGCCAGGAATAAG +
Preference number: 5 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPHVQLF*KPARNK
Trigger: CTTATTCCTGGCAGGCTTCAAGAACAGCTGCACATG...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp CTTCTCACCAATGACTGCACCCTGTCAAGTGCCAGCTGGATACAGTCAGACAACAATGCACTCCCTTCATaGAAAAGTGATGACATGAAA +
Preference number: 5 (lower is better)
Translates to: LLTNDCTLSSASWIQSDNNALPS*KSDDMK
Trigger: TTTCATGTCATCACTTTTCAATGAAGGGAGTGCATT...GTTGTCTGACTGTATCCAGCTGGCACTTGACAGGGTGCAGTCATTGGTGAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TTTCCCTTCTTCAGAAAGGCTGGGGCTGAGCCAGAGAATCTTAGGTCCTTTTCTGAGTTATGCTCTGAATaGTCACAATCATCTTTTCCC +
Preference number: 5 (lower is better)
Translates to: FPFFRKAGAEPENLRSFSELCSE*SQSSFP
Trigger: GGGAAAAGATGATTGTGACAATTCAGAGCATAACTC...AGAAAAGGACCTAAGATTCTCTGGCTCAGCCCCAGCCTTTCTGAAGAAGGGAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp TATTTGTCTTTGCAACCAGATGTCTGGAAAGCTCCCTTAACAGAAAAGCTGCCATCTATCCTTCCAAAATaGGTTGCCCCAAATGCCTCA +
Preference number: 5 (lower is better)
Translates to: YLSLQPDVWKAPLTEKLPSILPK*VAPNAS
Trigger: TGAGGCATTTGGGGCAACCAATTTTGGAAGGATAGA...TGGCAGCTTTTCTGTTAAGGGAGCTTTCCAGACATCTGGTTGCAAAGACAAATA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS-3UTR CAA 90 bp ATGCAATTCCCGCTTGTTTCCAGTCAGATGCTAGGTCAAGAGCTTTACATAAGGCCATTCAGTTTGAATTaGCAGAAATTTAATCCGCTC +
Preference number: 5 (lower is better)
Translates to: MQFPLVSSQMLGQELYIRPFSLN*QKFNPL
Trigger: GAGCGGATTAAATTTCTGCAAATTCAAACTGAATGG...CCTTATGTAAAGCTCTTGACCTAGCATCTGACTGGAAACAAGCGGGAATTGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CAA 90 bp CCTCCGCAGCCTCCGCCTCGCCGCCGCCGTCTGGCCCGCACGGGCTaGGGTCGGGCTCCCGCGATCGCTCCTAGCCGTGCGCTGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PPQPPPRRRRLARTG*GRAPAIAPSRALGG
Trigger: GCCGCCCAGCGCACGGCTAGGAGCGATCGCGGGAGCCCGACCCAAGCCCGTGCGGGCCAGACGGCGGCGGCGAGGCGGAGGCTGCGGAGG
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 72 bp CCACCCCGGCCCGGTGCAGGTGCTCTACGGCAGAGATaGGCTGTCGGATGTATCTGCGGGCTTCGGACTCCT +
Preference number: 6 (lower is better)
Translates to: PPRPGAGALRQR*AVGCICGLRTP
Trigger: AGGAGTCCGAAGCCCGCAGATACATCCGACAGCTCATCTCTGCCGTAGAGCACCTGCACCGGGCCGGGGTGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS CCA 72 bp CCGGAGAGAAGCGCGCGGCGGGCTGCCGGCGCCCTCTaGAAGGCAGCAGAAGAAAGCCCCATTCAGTTTGAA +
Preference number: 6 (lower is better)
Translates to: PERSARRAAGAL*KAAEESPIQFE
Trigger: TTCAAACTGAATGGGGCTTTCTTCTGCTGCCTTCCAGAGGGCGCCGGCAGCCCGCCGCGCGCTTCTCTCCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 72 bp TGGCAAAGGAGCCCTCGCCCAGCTTCCTGCTGCCGATaGGGTAGTTGCCCACGCGCTTGTGGTGCTGGAAGT +
Preference number: 6 (lower is better)
Translates to: WQRSPRPASCCR*GSCPRACGAGS
Trigger: ACTTCCAGCACCACAAGCGCGTGGGCAACTACCTCATCGGCAGCAGGAAGCTGGGCGAGGGCTCCTTTGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 72 bp GCCTCCATCCTCAGGAGAGTCCTTTGTCGGGGAAGCTaGACTTGGAGGCCTTCCGGTCCTTCAGGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: ASILRRVLCRGS*TWRPSGPSGGL
Trigger: AAGCCCTCCTGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAGGACTCTCCTGAGGATGGAGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS GCA 72 bp TTCAAGTCTCTGTGGACCACCCCGGCCCGGTGCAGGTaGTCTACGGCAGAGATGAGCTGTCGGATGTATCTG +
Preference number: 6 (lower is better)
Translates to: FKSLWTTPARCR*STAEMSCRMYL
Trigger: CAGATACATCCGACAGCTCATCTCTGCCGTAGAGCACCTGCACCGGGCCGGGGTGGTCCACAGAGACTTGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS GCA 72 bp TCTATCTTCAAGTCTCTGTGGACCACCCCGGCCCGGTaGAGGTGCTCTACGGCAGAGATGAGCTGTCGGATG +
Preference number: 6 (lower is better)
Translates to: SIFKSLWTTPAR*RCSTAEMSCRM
Trigger: CATCCGACAGCTCATCTCTGCCGTAGAGCACCTGCACCGGGCCGGGGTGGTCCACAGAGACTTGAAGATAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS GCA 72 bp CCAGAGTTGGATGCAAAGGAGTATGGAGAGGCGACATaGTTCCGGATGGCAGACCCGGGGACAGCGTCCTCT +
Preference number: 6 (lower is better)
Translates to: PELDAKEYGEAT*FRMADPGTASS
Trigger: AGAGGACGCTGTCCCCGGGTCTGCCATCCGGAAGCATGTCGCCTCTCCATACTCCTTTGCATCCAACTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 72 bp CTCCGGTTTCTTCACAATCCTCGGGGTCCTGGGCGGTaGCACGGGGATGAACTCCATGGAAGAAGAAGCCAC +
Preference number: 6 (lower is better)
Translates to: LRFLHNPRGPGR*HGDELHGRRSH
Trigger: GTGGCTTCTTCTTCCATGGAGTTCATCCCCGTGCCACCGCCCAGGACCCCGAGGATTGTGAAGAAACCGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CAA 72 bp CGGCAGCCAAAGGAATCTTTGTCGGGGAAGCTGGACTaGGAGGCCTTCCGGTCCTTCAGGAGGGCTTTGGTG +
Preference number: 6 (lower is better)
Translates to: RQPKESLSGKLD*EAFRSFRRALV
Trigger: CACCAAAGCCCTCCTGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAGATTCCTTTGGCTGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 72 bp CCAGGATGTGGCAGGCGCGGTTGGAGAGCACAGTGTTaGTCACGTCGCTGTTCTTGTAACCCAGCTTCTCGG +
Preference number: 6 (lower is better)
Translates to: PGCGRRGWRAQC*SRRCSCNPASR
Trigger: CCGAGAAGCTGGGTTACAAGAACAGCGACGTGATCAACACTGTGCTCTCCAACCGCGCCTGCCACATCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000465574.1
CDS GCA 72 bp CAGAAATTTAATCCGCTCGCGGGCGGCGGGAACAGATaGGAGCTCCACTCCGCAGCCCGTGCACTTTCAAAT +
Preference number: 6 (lower is better)
Translates to: QKFNPLAGGGNR*ELHSAARALSN
Trigger: ATTTGAAAGTGCACGGGCTGCGGAGTGGAGCTCGCATCTGTTCCCGCCGCCCGCGAGCGGATTAAATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 72 bp GTGTCCAGGTGTCCAGAGAGGCCTCATAGGACTCCTTaGGGGCCCTGTACTTTTCTATCTGGTAGAGCCGGG +
Preference number: 6 (lower is better)
Translates to: VSRCPERPHRTP*GPCTFLSGRAG
Trigger: CCCGGCTCTACCAGATAGAAAAGTACAGGGCCCCCAAGGAGTCCTATGAGGCCTCTCTGGACACCTGGACAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000270112.7
ENST00000439107.1
ENST00000465574.1
CDS CCA 72 bp GGCAGCCAAAGGAATCTTTGTCGGGGAAGCTGGACTTaGAGGCCTTCCGGTCCTTCAGGAGGGCTTTGGTGT +
Preference number: 6 (lower is better)
Translates to: GSQRNLCRGSWT*RPSGPSGGLWC
Trigger: ACACCAAAGCCCTCCTGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAGATTCCTTTGGCTGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 72 bp ATGCAAAGGAGTATGGAGAGGCGACATGCTTCCGGATaGCAGACCCGGGGACAGCGTCCTCTCGCTGGAATT +
Preference number: 6 (lower is better)
Translates to: MQRSMERRHASG*QTRGQRPLAGI
Trigger: AATTCCAGCGAGAGGACGCTGTCCCCGGGTCTGCCATCCGGAAGCATGTCGCCTCTCCATACTCCTTTGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 72 bp ATCCTCAGGAGAGTCCTTTGTCGGGGAAGCTGGACTTaGAGGCCTTCCGGTCCTTCAGGAGGGCTTTGGTGT +
Preference number: 6 (lower is better)
Translates to: ILRRVLCRGSWT*RPSGPSGGLWC
Trigger: ACACCAAAGCCCTCCTGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAGGACTCTCCTGAGGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS CAA 90 bp CTGCCGGCGCCCTCTGGAAGGCAGCAGAAGAAAGCCCCATTCAGTTaGAATTTGCAGAAATTTAATCCGCTCGCGGGCGGCGGGAACAGA +
Preference number: 6 (lower is better)
Translates to: LPAPSGRQQKKAPFS*NLQKFNPLAGGGNR
Trigger: TCTGTTCCCGCCGCCCGCGAGCGGATTAAATTTCTGCAAATTCAAACTGAATGGGGCTTTCTTCTGCTGCCTTCCAGAGGGCGCCGGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CCA 72 bp TATTGCGGCAGCCAAAGGAATCTTTGTCGGGGAAGCTaGACTTGGAGGCCTTCCGGTCCTTCAGGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: YCGSQRNLCRGS*TWRPSGPSGGL
Trigger: AAGCCCTCCTGAAGGACCGGAAGGCCTCCAAGTCCAGCTTCCCCGACAAAGATTCCTTTGGCTGCCGCAATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CAA 90 bp GCGCCCTCTGGAAGGCAGCAGAAGAAAGCCCCATTCAGTTTGAATTaGCAGAAATTTAATCCGCTCGCGGGCGGCGGGAACAGATGCGAG +
Preference number: 6 (lower is better)
Translates to: APSGRQQKKAPFSLN*QKFNPLAGGGNRCE
Trigger: CTCGCATCTGTTCCCGCCGCCCGCGAGCGGATTAAATTTCTGCAAATTCAAACTGAATGGGGCTTTCTTCTGCTGCCTTCCAGAGGGCGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 72 bp GAGGCCTTCCGGTCCTTCAGGAGGGCTTTGGTGTTCTaGATCTGTGTCATAAGCGAGCCTGAGGGCTGTTTG +
Preference number: 6 (lower is better)
Translates to: EAFRSFRRALVF*ICVISEPEGCL
Trigger: CAAACAGCCCTCAGGCTCGCTTATGACACAGATTCAGAACACCAAAGCCCTCCTGAAGGACCGGAAGGCCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000270112.7
ENST00000439107.1
ENST00000465574.1
CDS TCA 72 bp TCACAATCCTCGGGGTCCTGGGCGGTGGCACGGGGATaGACTCCATGGAAGAAGAAGCCACACAATTGGAAT +
Preference number: 6 (lower is better)
Translates to: SQSSGSWAVARG*TPWKKKPHNWN
Trigger: ATTCCAATTGTGTGGCTTCTTCTTCCATGGAGTTCATCCCCGTGCCACCGCCCAGGACCCCGAGGATTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS GCA 72 bp GAGTCCTGTGAACAATGGCAGGATGTCCTTTCAAGATaGCCGGTGACAAGGGCCTCCATCCTCAGGAGAGTC +
Preference number: 6 (lower is better)
Translates to: ESCEQWQDVLSR*PVTRASILRRV
Trigger: GACTCTCCTGAGGATGGAGGCCCTTGTCACCGGGCATCTTGAAAGGACATCCTGCCATTGTTCACAGGACTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000439107.1
CDS CCA 72 bp ATTAAGCCAGCGATTCGCCAGTGCCTGCTGAATATTTaGCCTCTTCACAGGATCCGGTTCCAGGAGAGAGCG +
Preference number: 6 (lower is better)
Translates to: IKPAIRQCLLNI*PLHRIRFQERA
Trigger: CGCTCTCTCCTGGAACCGGATCCTGTGAAGAGGCCAAATATTCAGCAGGCACTGGCGAATCGCTGGCTTAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 72 bp GGCTTTGGTGTTCTGAATCTGTGTCATAAGCGAGCCTaGGGGCTGTTTGTGCGAGGGCAGGTTCTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: GFGVLNLCHKRA*GLFVRGQVLVQ
Trigger: TTGGACAAGAACCTGCCCTCGCACAAACAGCCCTCAGGCTCGCTTATGACACAGATTCAGAACACCAAAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000270112.7
ENST00000439107.1
ENST00000465574.1
CDS CAA 72 bp GGAAGGCAGCAGAAGAAAGCCCCATTCAGTTTGAATTaGCAGAAATTTAATCCGCTCGCGGGCGGCGGGAAC +
Preference number: 6 (lower is better)
Translates to: GRQQKKAPFSLN*QKFNPLAGGGN
Trigger: GTTCCCGCCGCCCGCGAGCGGATTAAATTTCTGCAAATTCAAACTGAATGGGGCTTTCTTCTGCTGCCTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CAA 72 bp CCCTCTGGAAGGCAGCAGAAGAAAGCCCCATTCAGTTaGAATTTGCAGAAATTTAATCCGCTCGCGGGCGGC +
Preference number: 6 (lower is better)
Translates to: PSGRQQKKAPFS*NLQKFNPLAGG
Trigger: GCCGCCCGCGAGCGGATTAAATTTCTGCAAATTCAAACTGAATGGGGCTTTCTTCTGCTGCCTTCCAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS GCA 72 bp CTGTGTGCTGAACGGATCCGAGTAACCCAGGATCCCTaGGCAGTTGCTCAAACCAAAGTCAATCAGCTTGAT +
Preference number: 6 (lower is better)
Translates to: LCAERIRVTQDP*AVAQTKVNQLD
Trigger: ATCAAGCTGATTGACTTTGGTTTGAGCAACTGCGCAGGGATCCTGGGTTACTCGGATCCGTTCAGCACACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000270112.7
ENST00000430354.1
CDS TCA 72 bp TCTGCTGGATCTGACCCTCTCGCCGCAGGTTTTTGGTaGCATAGGTGTCCTTTTTGGCTCTCTTCTTATCAA +
Preference number: 6 (lower is better)
Translates to: SAGSDPLAAGFW*HRCPFWLSSYQ
Trigger: TTGATAAGAAGAGAGCCAAAAAGGACACCTATGTCACCAAAAACCTGCGGCGAGAGGGTCAGATCCAGCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CAA 90 bp ATGAACTCCATGGAAGAAGAAGCCACACAATTGGAATCTGAGGTTTaGCGGAAAATATTGCGGCAGCCAAAGGAATCTTTGTCGGGGAAG +
Preference number: 6 (lower is better)
Translates to: MNSMEEEATQLESEV*RKILRQPKESLSGK
Trigger: CTTCCCCGACAAAGATTCCTTTGGCTGCCGCAATATTTTCCGCAAAACCTCAGATTCCAATTGTGTGGCTTCTTCTTCCATGGAGTTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS TCA 72 bp GAACTCCATGGAAGAAGAAGCCACACAATTGGAATCTaGGGTTTTGCGGAAAATATTGCGGCAGCCAAAGGA +
Preference number: 6 (lower is better)
Translates to: ELHGRRSHTIGI*GFAENIAAAKG
Trigger: TCCTTTGGCTGCCGCAATATTTTCCGCAAAACCTCAGATTCCAATTGTGTGGCTTCTTCTTCCATGGAGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000270112.7
CDS CAA 72 bp ATGGAAGAAGAAGCCACACAATTGGAATCTGAGGTTTaGCGGAAAATATTGCGGCAGCCAAAGGAATCTTTG +
Preference number: 6 (lower is better)
Translates to: MEEEATQLESEV*RKILRQPKESL
Trigger: CAAAGATTCCTTTGGCTGCCGCAATATTTTCCGCAAAACCTCAGATTCCAATTGTGTGGCTTCTTCTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000270112.7