RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HTR4 (Homo sapiens)

Ensembl gene IDs: ENSG00000164270

Ensembl transcript IDs: ENST00000360693.7, ENST00000362016.6, ENST00000377888.8, ENST00000517929.5, ENST00000519495.1, ENST00000520086.1, ENST00000520514.5, ENST00000521124.5, ENST00000521530.5, ENST00000521735.5, ENST00000522588.5, ENST00000524063.3, ENST00000631296.1

Found 748 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCCAGTaGTGCTGGATCCTGCCCTCCTGCACCTTGGGGGAGCTGCAGGGG +
Preference number: 1 (lower is better)
Translates to: LGPLASSTALPRHPQ*CWILPSCTLGELQG
Trigger: CCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR TCA 90 bp CCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGA +
Preference number: 1 (lower is better)
Translates to: PASTGFLHWRTESLR*REYRVQSRTSSSLG
Trigger: TCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR GCA 90 bp ACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGC +
Preference number: 1 (lower is better)
Translates to: TCWNLRGKAQRAPGS*TGGRKASGEENTGC
Trigger: GCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR CCA 90 bp ACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACT +
Preference number: 1 (lower is better)
Translates to: TRRPLCPLTPSSATC*NLRGKAQRAPGSCT
Trigger: AGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR CCA 90 bp TCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTGTCCCAGGGGCCTAAGTGTCACTGG +
Preference number: 1 (lower is better)
Translates to: SRTSSSLGPGPLSEA*LSSGSLSQGPKCHW
Trigger: CCAGTGACACTTAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR CCA 90 bp GCATGGCTGTCTTCTGGGTCATTGTCCCAGGGGCCTAAGTGTCACTaGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACT +
Preference number: 1 (lower is better)
Translates to: AWLSSGSLSQGPKCH*AEQPPKEKLLAGDT
Trigger: AGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACTTAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGTCCCA +
Preference number: 1 (lower is better)
Translates to: KRIPGAVAHKQQLRT*PSFGGMAVFWVIVP
Trigger: TGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR CCA 90 bp TTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAGGGCGGCAATTTaGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCCAGT +
Preference number: 1 (lower is better)
Translates to: FKISQLVCSTARAAI*VLWLQVQHCLGIPS
Trigger: ACTGGGGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 90 bp TGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTTaGCAAGCAAAACAAAGTCAGGACACTTGGGAGCACCCCTTTCAG +
Preference number: 1 (lower is better)
Translates to: CLSGTDRAGGCRGSA*QAKQSQDTWEHPFQ
Trigger: CTGAAAGGGGTGCTCCCAAGTGTCCTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR CCA 90 bp AGGAGGGTCGTTCCTTTGAAACAAAGCCAAAAGGCAGGCAGGCCATaGCTTCTCGAGGTAGCAGACGGCTATAGCAGCATACTGTTGTCT +
Preference number: 1 (lower is better)
Translates to: RRVVPLKQSQKAGRP*LLEVADGYSSILLS
Trigger: AGACAACAGTATGCTGCTATAGCCGTCTGCTACCTCGAGAAGCCATGGCCTGCCTGCCTTTTGGCTTTGTTTCAAAGGAACGACCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR TCA 90 bp GTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTGAGTGACGGGAACATGTCAGAGACA +
Preference number: 1 (lower is better)
Translates to: VTEIGRSKLSCLERE*DRSDTVSDGNMSET
Trigger: TGTCTCTGACATGTTCCCGTCACTCACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 90 bp ACCAGGAGGAAGCTATCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTaGAGACCATTTTCCTCTGACAGATCTCTGACCCTGTGTCTTCCA +
Preference number: 1 (lower is better)
Translates to: TRRKLSVFSFPPELL*RPFSSDRSLTLCLP
Trigger: TGGAAGACACAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGATAGCTTCCTCCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 90 bp TCCTCAATCAGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATaGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGG +
Preference number: 1 (lower is better)
Translates to: SSIRSMIPGILGHCV*AVSRVPDDVPCAER
Trigger: CCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTGATTGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
3UTR TCA 90 bp ATATTAATGCCGTCACATCTGCACCCTCAGGTTTCTGAAGCCGGGTaGAGCAGCCTCCACAGCAGTAAGTTCCAGAAGAAACCAAGCTTA +
Preference number: 1 (lower is better)
Translates to: ILMPSHLHPQVSEAG*SSLHSSKFQKKPSL
Trigger: TAAGCTTGGTTTCTTCTGGAACTTACTGCTGTGGAGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGTGCAGATGTGACGGCATTAATAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 90 bp TGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTaGCAGATCTCTGACCCTGTGTCTTCCATGGAAAATAAATGGAGC +
Preference number: 1 (lower is better)
Translates to: CLQLPSRVAVETIFL*QISDPVSSMENKWS
Trigger: GCTCCATTTATTTTCCATGGAAGACACAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 90 bp TCTTCTCTATTTGGAGGTGCTTTAAGCAGTAAGAGCAACAGCAAATaGTTCCAGAAATGTGGCAATGGTTGTGCCTCCAGCAGACCCATA +
Preference number: 1 (lower is better)
Translates to: SSLFGGALSSKSNSK*FQKCGNGCASSRPI
Trigger: TATGGGTCTGCTGGAGGCACAACCATTGCCACATTTCTGGAACCATTTGCTGTTGCTCTTACTGCTTAAAGCACCTCCAAATAGAGAAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 90 bp GTCTTAGAAACAGAAAGAAAACTTAAAGGTCCTCTAGTCCAAGCTTaGGTGCACAGATGTGGAAAGTGGGGTCCAGAGATGAAAGAACAC +
Preference number: 1 (lower is better)
Translates to: VLETERKLKGPLVQA*VHRCGKWGPEMKEH
Trigger: GTGTTCTTTCATCTCTGGACCCCACTTTCCACATCTGTGCACTCAAGCTTGGACTAGAGGACCTTTAAGTTTTCTTTCTGTTTCTAAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 90 bp TCACCAATCAAGGGAATGATTGCATATAAAGGAGAGCTGGCTGTATaGAATCCAGCACAAGACCAGGAGTCAAAGAGACACAAGATCTTA +
Preference number: 1 (lower is better)
Translates to: SPIKGMIAYKGELAV*NPAQDQESKRHKIL
Trigger: TAAGATCTTGTGTCTCTTTGACTCCTGGTCTTGTGCTGGATTCCATACAGCCAGCTCTCCTTTATATGCAATCATTCCCTTGATTGGTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 90 bp GGAATAACAAGGTGTCATAAGAAAAGAAGCCAGATACACCAGGGTTaGCTGAGCAACAGACCCAGAACGATGCAGGTCAATAATAATTCT +
Preference number: 1 (lower is better)
Translates to: GITRCHKKRSQIHQG*LSNRPRTMQVNNNS
Trigger: AGAATTATTATTGACCTGCATCGTTCTGGGTCTGTTGCTCAGTCAACCCTGGTGTATCTGGCTTCTTTTCTTATGACACCTTGTTATTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 90 bp ACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGAATTTaGAATGCTACAATGCTTGCTTCTGAAATACTTCTATCTCAAGCA +
Preference number: 1 (lower is better)
Translates to: TTLCVFQGTRLGLRI*NATMLASEILLSQA
Trigger: TGCTTGAGATAGAAGTATTTCAGAAGCAAGCATTGTAGCATTTCAAATTCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 90 bp GGTTATGTTTTCCAAATGAGAGATTCAACATGGAAATTTGGGCGATaGGGTGAGAAAGAGGAGTATATTTCTTCTCTATTTGGAGGTGCT +
Preference number: 1 (lower is better)
Translates to: GYVFQMRDSTWKFGR*GEKEEYISSLFGGA
Trigger: AGCACCTCCAAATAGAGAAGAAATATACTCCTCTTTCTCACCTCATCGCCCAAATTTCCATGTTGAATCTCTCATTTGGAAAACATAACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR GCA 90 bp CAGAAGAAACCAAGCTTATATAGTGGGGAAGCTGTATCTGTTATTTaGCACAGTTTTTATGCACTTATATCAATCAATGAGAGCCAGAAG +
Preference number: 1 (lower is better)
Translates to: QKKPSLYSGEAVSVI*HSFYALISINESQK
Trigger: CTTCTGGCTCTCATTGATTGATATAAGTGCATAAAAACTGTGGCAAATAACAGATACAGCTTCCCCACTATATAAGCTTGGTTTCTTCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 90 bp TCAGTTCTTCCAGTTACTGATATTCGGTCAATCAACACTTTTAATTaGCTGATGGTCATCCAATTGTCTCCTTCAACTTTACTAGGAACT +
Preference number: 1 (lower is better)
Translates to: SVLPVTDIRSINTFN*LMVIQLSPSTLLGT
Trigger: AGTTCCTAGTAAAGTTGAAGGAGACAATTGGATGACCATCAGTCAATTAAAAGTGTTGATTGACCGAATATCAGTAACTGGAAGAACTGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR TCA 90 bp AACAAGATTAGGTCTGAGAATTTGAAATGCTACAATGCTTGCTTCTaGAATACTTCTATCTCAAGCAATTTTAGTATGGGGCCCACTTTG +
Preference number: 1 (lower is better)
Translates to: NKIRSENLKCYNACF*NTSISSNFSMGPTL
Trigger: CAAAGTGGGCCCCATACTAAAATTGCTTGAGATAGAAGTATTTCAGAAGCAAGCATTGTAGCATTTCAAATTCTCAGACCTAATCTTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAGGCATGGCTGTCTTCTaGGTCATTGTCCCAGGGGCC +
Preference number: 2 (lower is better)
Translates to: PSEHRVPALADGKPQVKRGMAVF*VIVPGA
Trigger: GGCCCCTGGGACAATGACCCAGAAGACAGCCATGCC...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR CAA 90 bp CACAGCCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATaGCCTCGGCATCCCCAGTGCTGCTGGATCCTGCCCTCCTGCACC +
Preference number: 2 (lower is better)
Translates to: HSQGGNLGPLASSTA*PRHPQCCWILPSCT
Trigger: GGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGGCTGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: PSEHRVPALADGKPQVKRTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACGGCCATTATGTCCCCTaGCTCCCTCCAGCGCCACCT +
Preference number: 2 (lower is better)
Translates to: TSGTDKGANQEDARLDPDGHYVP*LPPAPP
Trigger: AGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCC...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: APGSCTGGRKASGEENTGTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR GCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SQRKSPASTGFLHWRTESEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR GCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: APGSCTGGRKASGEENTGEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR CCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: SQRKSPASTGFLHWRTESSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR CAA 90 bp TTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATaGTCCCAGGGGCCTAAGTGTCACTGGGCTGAGCAGCCACCAAAG +
Preference number: 2 (lower is better)
Translates to: LGPGPLSEAWLSSGS*SQGPKCHWAEQPPK
Trigger: CTTTGGTGGCTGCTCAGCCCAGTGACACTTAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR GCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCCAGGAGCGACGCCTCTaGCTAAGACAGGAACAGAGA +
Preference number: 2 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFQERRL*LRQEQR
Trigger: TCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCATCAGACACAGTGAGTaGCGGGAACATGTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: SQRKSPASTGFLHWRTESIRHSE*REHVRD
Trigger: GTCTCTGACATGTTCCCGTCACTCACTGTGTCTGAT...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR GCA 90 bp GCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGACTCTCCCACTGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: AEQPPKEKLLAGDTDSPTEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...AGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR GCA 90 bp GCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGACTCTCCCACTCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: AEQPPKEKLLAGDTDSPTPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...AGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGGCCACCACACTCCACTaGATCCCTCTTCCCCAGAAA +
Preference number: 2 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWATTLH*IPLPQK
Trigger: TTTCTGGGGAAGAGGGATGCAGTGGAGTGTGGTGGC...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR CCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTG +
Preference number: 2 (lower is better)
Translates to: HLLESQRKSPASTGFLHWPLSEA*LSSGSL
Trigger: CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGATCAGACACAGTGAGTaGCGGGAACATGTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: HLLESQRKSPASTGFLHWIRHSE*REHVRD
Trigger: GTCTCTGACATGTTCCCGTCACTCACTGTGTCTGAT...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACATCGTGCTTAGAACGTaGGTGAGACAGATCAGACAC +
Preference number: 2 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHIVLRT*VRQIRH
Trigger: GTGTCTGATCTGTCTCACTCACGTTCTAAGCACGAT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR CCA 90 bp AGTGTCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTG +
Preference number: 2 (lower is better)
Translates to: SVTGLSSHQRRSCWRVTLPLSEA*LSSGSL
Trigger: CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGG...CAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR CCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACCAAAAGCAGAGAATCTaGGAAGAGGGAGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHQKQRI*EEGVLG
Trigger: TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTG...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR CCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCAAGTGTGTTAGCGTCTaGCACAGAACAGGGCGAAGA +
Preference number: 2 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFKCVSV*HRTGRR
Trigger: TCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTT...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 2 (lower is better)
Translates to: PGRQFGSSGFKYSIASASTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 2 (lower is better)
Translates to: TSGTDKGANQEDARLDPDTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 2 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 2 (lower is better)
Translates to: HLLESQRKSPASTGFLHWCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGATCGTGCTTAGAACGTaGGTGAGACAGATCAGACAC +
Preference number: 2 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQIVLRT*VRQIRH
Trigger: GTGTCTGATCTGTCTCACTCACGTTCTAAGCACGAT...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCAAAAGCAGAGAATCTaGGAAGAGGGAGTGTTGGGA +
Preference number: 2 (lower is better)
Translates to: HLLESQRKSPASTGFLHWQKQRI*EEGVLG
Trigger: TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR CCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCCTCCAGAGTTGCTGTaGAGACCATTTTCCTCTGAC +
Preference number: 2 (lower is better)
Translates to: PGRQFGSSGFKYSIASASPPELL*RPFSSD
Trigger: GTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGG...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 90 bp ATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAGGGCGGCAATTaGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCCAG +
Preference number: 2 (lower is better)
Translates to: IQDLTACLQHSQGGN*GPLASSTALPRHPQ
Trigger: CTGGGGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGATCGTGCTTAGAACGTaGGTGAGACAGATCAGACAC +
Preference number: 2 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWIVLRT*VRQIRH
Trigger: GTGTCTGATCTGTCTCACTCACGTTCTAAGCACGAT...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGGAGGGAGTATTTTGTTaGTATCTGGAAGCCCACACA +
Preference number: 2 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQEGVFC*YLEAHT
Trigger: TGTGTGGGCTTCCAGATATCAACAAAATACTCCCTC...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCACACTTTTAATTGACTaGTGGTCATCCAATTGTCTC +
Preference number: 2 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGTLLID*WSSNCL
Trigger: GAGACAATTGGATGACCATCAGTCAATTAAAAGTGT...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR GCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACGGCATCCCCAGTGCTaGTGGATCCTGCCCTCCTGC +
Preference number: 2 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKRHPQC*WILPSC
Trigger: GCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACACAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATG +
Preference number: 2 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTQQLRT*PSFGGM
Trigger: CATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTG...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCCAGGAGCGACGCCTCTaGCTAAGACAGGAACAGAGA +
Preference number: 2 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGQERRL*LRQEQR
Trigger: TCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 90 bp TTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCAGGGGATAGCTaGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACA +
Preference number: 2 (lower is better)
Translates to: LASGTEQGEEEAGDS*NMAVTDVTKQVSKT
Trigger: TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGATTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 2 (lower is better)
Translates to: PSEHRVPALADGKPQVKRLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAGTTCTTCCAGTTACTaGTATTCGGTCAATCAACAC +
Preference number: 2 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHSSSSY*YSVNQH
Trigger: GTGTTGATTGACCGAATATCAGTAACTGGAAGAACT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR GCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCACGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCC +
Preference number: 2 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPRAPGS*TGGRKA
Trigger: GGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCG...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACATCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 2 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAATTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 2 (lower is better)
Translates to: KAQRAPGSCTGGRKASGELGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR GCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 2 (lower is better)
Translates to: SVFSFPPELLWRPFSSDREENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR GCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAACCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: RDFCYGAFARATDSALNKPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTG +
Preference number: 2 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREPLSEA*LSSGSL
Trigger: CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGG...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACAATCAGACACAGTGAGTaGCGGGAACATGTCAGAGAC +
Preference number: 2 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTIRHSE*REHVRD
Trigger: GTCTCTGACATGTTCCCGTCACTCACTGTGTCTGAT...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp AGTGTCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGCTTCCCCAGAAATGTTaGCTAATGAACATTCAGTTC +
Preference number: 2 (lower is better)
Translates to: SVTGLSSHQRRSCWRVTLLPQKC*LMNIQF
Trigger: GAACTGAATGTTCATTAGTCAACATTTCTGGGGAAG...CAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR CCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCACCCTGTGTCTTCCATaGAAAATAAATGGAGCATGT +
Preference number: 2 (lower is better)
Translates to: PGRQFGSSGFKYSIASASTLCLP*KINGAC
Trigger: ACATGCTCCATTTATTTTCCATGGAAGACACAGGGT...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 90 bp GAGCGACGCCTCTGGCTAAGACAGGAACAGAGAGGGAGTATTTTGTaGATATCTGGAAGCCCACACAGCAAAGAAGGCGTATTTGGAGAC +
Preference number: 2 (lower is better)
Translates to: ERRLWLRQEQRGSIL*ISGSPHSKEGVFGD
Trigger: GTCTCCAAATACGCCTTCTTTGCTGTGTGGGCTTCCAGATATCAACAAAATACTCCCTCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 90 bp CAGGAGCGACGCCTCTGGCTAAGACAGGAACAGAGAGGGAGTATTTaGTTGATATCTGGAAGCCCACACAGCAAAGAAGGCGTATTTGGA +
Preference number: 2 (lower is better)
Translates to: QERRLWLRQEQRGSI*LISGSPHSKEGVFG
Trigger: TCCAAATACGCCTTCTTTGCTGTGTGGGCTTCCAGATATCAACAAAATACTCCCTCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACATGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 2 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR GCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAAGCTTCCCTCCAGAGTTaGTGTGGAGACCATTTTCCT +
Preference number: 2 (lower is better)
Translates to: RDFCYGAFARATDSALNKASLQS*CGDHFP
Trigger: AGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGC...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR GCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAAATCTCACAGCTTGTTTaGAGCACAGCCAGGGCGGCA +
Preference number: 2 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKISQLV*STARAA
Trigger: TGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGAT...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAACCTCCAGAGTTGCTGTaGAGACCATTTTCCTCTGAC +
Preference number: 2 (lower is better)
Translates to: RDFCYGAFARATDSALNKPPELL*RPFSSD
Trigger: GTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGG...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR GCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGATGTGGCAATGGTTGTaGCTCCAGCAGACCCATAAC +
Preference number: 2 (lower is better)
Translates to: NSKYASVELIELEAAEVQMWQWL*LQQTHN
Trigger: GTTATGGGTCTGCTGGAGGCACAACCATTGCCACAT...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCACAGGAGCGACGCCTCTaGCTAAGACAGGAACAGAGA +
Preference number: 2 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPQERRL*LRQEQR
Trigger: TCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGACTCCCTGCTCTGCCATaGAGCTCTGTGACCTGCACT +
Preference number: 2 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRLPALP*SSVTCT
Trigger: AGTGCAGGTCACAGAGCTCCATGGCAGAGCAGGGAG...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR TCA 90 bp AGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTCAGGACACTCACCAATCAAGGGAATaGTTGCATATAAAGGAGAGC +
Preference number: 2 (lower is better)
Translates to: RAGGCRGSAWQAKQSQDTHQSRE*LHIKES
Trigger: GCTCTCCTTTATATGCAATCATTCCCTTGATTGGTG...AGTGTCCTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR TCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCAGCAAGGAGGATCATaGGGCTTCTTGACCTCTTTA +
Preference number: 2 (lower is better)
Translates to: NSKYASVELIELEAAEVQQQGGS*GFLTSL
Trigger: TAAAGAGGTCAAGAAGCCTCATGATCCTCCTTGCTG...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR TCA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGATCCAGGGGGAAGCTTTaGGGCCTACAGACTGCTCAT +
Preference number: 2 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRSRGKL*GLQTAH
Trigger: ATGAGCAGTCTGTAGGCCTCAAAGCTTCCCCCTGGA...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR GCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 2 (lower is better)
Translates to: GSNKARLKGFKMISQVHGPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCACCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTG +
Preference number: 2 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPPLSEA*LSSGSL
Trigger: CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGG...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 2 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp AGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTCAGGACACTAAGAGCAACAGCAAATaGTTCCAGAAATGTGGCAAT +
Preference number: 2 (lower is better)
Translates to: RAGGCRGSAWQAKQSQDTKSNSK*FQKCGN
Trigger: ATTGCCACATTTCTGGAACCATTTGCTGTTGCTCTT...AGTGTCCTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR TCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACATTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 2 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR GCA 90 bp ACAGAGGTAATTCTGACTGGGCTTGAGCTGAGAGTCATAAAGATCTTGCAATTTGATAGAGCTGGAGGCTaGAGAGGTTCAGCTTGGCAA +
Preference number: 2 (lower is better)
Translates to: TEVILTGLELRVIKILQFDRAGG*RGSAWQ
Trigger: TTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATC...AAATTGCAAGATCTTTATGACTCTCAGCTCAAGCCCAGTCAGAATTACCTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR TCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAATTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 2 (lower is better)
Translates to: RDFCYGAFARATDSALNKLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 2 (lower is better)
Translates to: GSNKARLKGFKMISQVHGCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR TCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGAAATGGAGCATGTCCTaGAGAGGAGGACAGACATTG +
Preference number: 2 (lower is better)
Translates to: GSNKARLKGFKMISQVHGKWSMS*RGGQTL
Trigger: CAATGTCTGTCCTCCTCTTCAGGACATGCTCCATTT...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR GCA 90 bp AGCCTGAAAACTATATTTTTCAGACTTTCTTGCCCACTGGCTTCAGGTTATGTTACATCTCCTTCTCCCTaGTCTGCCATGGAGCTCTGT +
Preference number: 2 (lower is better)
Translates to: SLKTIFFRLSCPLASGYVTSPSP*SAMELC
Trigger: ACAGAGCTCCATGGCAGAGCAGGGAGAAGGAGATGT...AACATAACCTGAAGCCAGTGGGCAAGAAAGTCTGAAAAATATAGTTTTCAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CCA 90 bp ATTGAGACTCAGATGCTTATATTAATGCCGTCACATCTGCACCCTCAGGTTTCTCTGTGTCCAAGTCCATaGAAGCTCACATTAGCATCA +
Preference number: 2 (lower is better)
Translates to: IETQMLILMPSHLHPQVSLCPSP*KLTLAS
Trigger: TGATGCTAATGTGAGCTTCCATGGACTTGGACACAG...AGAAACCTGAGGGTGCAGATGTGACGGCATTAATATAAGCATCTGAGTCTCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CCA 90 bp ATTGAGACTCAGATGCTTATATTAATGCCGTCACATCTGCACCCTCAGGTTTCTGACTTTCTTGCCCACTaGCTTCAGGTTATGTTTTCC +
Preference number: 2 (lower is better)
Translates to: IETQMLILMPSHLHPQVSDFLAH*LQVMFS
Trigger: GGAAAACATAACCTGAAGCCAGTGGGCAAGAAAGTC...AGAAACCTGAGGGTGCAGATGTGACGGCATTAATATAAGCATCTGAGTCTCAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCACCCTGTGTCTTCCATaGAAAATAAATGGAGCATGT +
Preference number: 2 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCTLCLP*KINGAC
Trigger: ACATGCTCCATTTATTTTCCATGGAAGACACAGGGT...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTATGAGCAATAAGAATTaGCCACAGTCCTCAAGGAGC +
Preference number: 2 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTMSNKN*PQSSRS
Trigger: GCTCCTTGAGGACTGTGGCCAATTCTTATTGCTCAT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
3UTR-3UTR GCA 90 bp AAAATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGGCTGTATCTGTTATTTaGCACAGTTTTTATGCACTT +
Preference number: 2 (lower is better)
Translates to: KIHHNTTLCVFQGTRLGLAVSVI*HSFYAL
Trigger: AAGTGCATAAAAACTGTGGCAAATAACAGATACAGC...CAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAATTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR CCA 72 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTC +
Preference number: 3 (lower is better)
Translates to: PGAVAHKQQLRT*PSFGGMAVFWV
Trigger: GACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR TCA 72 bp ACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAGTCGCGCACAAGCAGC +
Preference number: 3 (lower is better)
Translates to: TGFLHWRTESLR*REYRVQSRTSS
Trigger: GCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR GCA 72 bp GCTTCAAGTACAGCATTGCCTCGGCATCCCCAGTGCTaGTGGATCCTGCCCTCCTGCACCTTGGGGGAGCTG +
Preference number: 3 (lower is better)
Translates to: ASSTALPRHPQC*WILPSCTLGEL
Trigger: CAGCTCCCCCAAGGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 72 bp TCAAGTACAGCATTGCCTCGGCATCCCCAGTGCTGCTaGATCCTGCCCTCCTGCACCTTGGGGGAGCTGCAG +
Preference number: 3 (lower is better)
Translates to: SSTALPRHPQCC*ILPSCTLGELQ
Trigger: CTGCAGCTCCCCCAAGGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGGCAATGCTGTACTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR GCA 72 bp AGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCG +
Preference number: 3 (lower is better)
Translates to: RPLCPLTPSSAT*WNLRGKAQRAP
Trigger: CGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR CCA 72 bp GTCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTaGCGGGTGACACTGACTCTCCCACTGGCCACCACA +
Preference number: 3 (lower is better)
Translates to: VTGLSSHQRRSC*RVTLTLPLATT
Trigger: TGTGGTGGCCAGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR CCA 72 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTGTCCCAGGGGCCTAAG +
Preference number: 3 (lower is better)
Translates to: SSSLGPGPLSEA*LSSGSLSQGPK
Trigger: CTTAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR CAA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGAGGCAGGGGATAGCTaGAACATGGCTGTGACGGAC +
Preference number: 3 (lower is better)
Translates to: WTSGTDKGANQEDARLDPEAGDS*NMAVTD
Trigger: GTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTC...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CAA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCCACCAAAGGAGAAGTaGCTGGCGGGTGACACTGAC +
Preference number: 3 (lower is better)
Translates to: VPALADGKPQVKRIPGAVPPKEK*LAGDTD
Trigger: GTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR CAA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCAAGAGGATGCACGTTaGGACCCAGACACAGGGAGA +
Preference number: 3 (lower is better)
Translates to: PGRQFGSSGFKYSIASASQEDAR*DPDTGR
Trigger: TCTCCCTGTGTCTGGGTCCAAACGTGCATCCTCTTG...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CAA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAACTGCCCTCCTGCACCTaGGGGGAGCTGCAGGGGAAA +
Preference number: 3 (lower is better)
Translates to: RDFCYGAFARATDSALNKLPSCT*GELQGK
Trigger: TTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCAG...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR GCA 72 bp AATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCCTCAGGTGAAGAGAAT +
Preference number: 3 (lower is better)
Translates to: NLRGKAQRAPGS*TGGRKASGEEN
Trigger: ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR CCA 72 bp TCACAGCTTGTTTGCAGCACAGCCAGGGCGGCAATTTaGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGC +
Preference number: 3 (lower is better)
Translates to: SQLVCSTARAAI*VLWLQVQHCLG
Trigger: GCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CAA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCAGAGAGGGAGTATTTaGTTGATATCTGGAAGCCCA +
Preference number: 3 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQQRGSI*LISGSP
Trigger: TGGGCTTCCAGATATCAACAAAATACTCCCTCTCTG...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR TCA 72 bp CCGTCACATCTGCACCCTCAGGTTTCTGAAGCCGGGTaGAGCAGCCTCCACAGCAGTAAGTTCCAGAAGAAA +
Preference number: 3 (lower is better)
Translates to: PSHLHPQVSEAG*SSLHSSKFQKK
Trigger: TTTCTTCTGGAACTTACTGCTGTGGAGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGTGCAGATGTGACGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CAA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACAGAGGGAGTATTTTGTaGATATCTGGAAGCCCACAC +
Preference number: 3 (lower is better)
Translates to: TSGTDKGANQEDARLDPDRGSIL*ISGSPH
Trigger: GTGTGGGCTTCCAGATATCAACAAAATACTCCCTCT...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 72 bp GGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTTaGCAAGCAAAACAAAGTCAGGACACTTGGGAGCAC +
Preference number: 3 (lower is better)
Translates to: GTDRAGGCRGSA*QAKQSQDTWEH
Trigger: GTGCTCCCAAGTGTCCTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR-3UTR CAA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAAGCTTCAAGTACAGCATaGCCTCGGCATCCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKASSTA*PRHPQC
Trigger: GCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGC...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR TCA 72 bp GAAATAAAAAGTGAACAAGGAGGCCATTATGTCCCCTaGCTCCCTCCAGCGCCACCTGCTGGAATCTCAGAG +
Preference number: 3 (lower is better)
Translates to: EIKSEQGGHYVP*LPPAPPAGISE
Trigger: CTCTGAGATTCCAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTTTTATTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
3UTR-3UTR CAA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTCTTCCCCAGAAATGTaGACTAATGAACATTCAGTT +
Preference number: 3 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSSSPEM*TNEHSV
Trigger: AACTGAATGTTCATTAGTCAACATTTCTGGGGAAGA...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR-3UTR CAA 90 bp TTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGAGGGATTCTGGGTCATaGTGTATGGGCAGTTTCTCG +
Preference number: 3 (lower is better)
Translates to: FWVIVYGQFLEFLMMSPVRDSGS*CMGSFS
Trigger: CGAGAAACTGCCCATACACAATGACCCAGAATCCCT...CACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
3UTR TCA 72 bp ATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTGAGTGACGGGAACATG +
Preference number: 3 (lower is better)
Translates to: IGRSKLSCLERE*DRSDTVSDGNM
Trigger: CATGTTCCCGTCACTCACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 72 bp AAGCTATCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTaGAGACCATTTTCCTCTGACAGATCTCTGACCCTG +
Preference number: 3 (lower is better)
Translates to: KLSVFSFPPELL*RPFSSDRSLTL
Trigger: CAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGATAGCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR GCA 72 bp CAACAGCAAATGGTTCCAGAAATGTGGCAATGGTTGTaGCTCCAGCAGACCCATAACAGCAAGGAGGATCAT +
Preference number: 3 (lower is better)
Translates to: QQQMVPEMWQWL*LQQTHNSKEDH
Trigger: ATGATCCTCCTTGCTGTTATGGGTCTGCTGGAGGCACAACCATTGCCACATTTCTGGAACCATTTGCTGTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR GCA 72 bp AAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTaGAGAGGTTCAGCTTGGCAAGCAAAACAAAGTCAG +
Preference number: 3 (lower is better)
Translates to: KVCLSGTDRAGG*RGSAWQAKQSQ
Trigger: CTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR CCA 72 bp AGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATaGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGT +
Preference number: 3 (lower is better)
Translates to: RSMIPGILGHCV*AVSRVPDDVPC
Trigger: ACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
3UTR-3UTR CAA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAAGCTTCCCTCCAGAGTaGCTGTGGAGACCATTTTCC +
Preference number: 3 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPSFPPE*LWRPFS
Trigger: GGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCT...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 72 bp TTAAACCACAGCCAAGATCAAAGTCAGAATCTCACATaGCTCTGGGTTTGGCATTTACCTTCCCGGGACTTC +
Preference number: 3 (lower is better)
Translates to: LNHSQDQSQNLT*LWVWHLPSRDF
Trigger: GAAGTCCCGGGAAGGTAAATGCCAAACCCAGAGCCATGTGAGATTCTGACTTTGATCTTGGCTGTGGTTTAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CCA 72 bp TTTGGAGGTGCTTTAAGCAGTAAGAGCAACAGCAAATaGTTCCAGAAATGTGGCAATGGTTGTGCCTCCAGC +
Preference number: 3 (lower is better)
Translates to: FGGALSSKSNSK*FQKCGNGCASS
Trigger: GCTGGAGGCACAACCATTGCCACATTTCTGGAACCATTTGCTGTTGCTCTTACTGCTTAAAGCACCTCCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 72 bp ACAGAAAGAAAACTTAAAGGTCCTCTAGTCCAAGCTTaGGTGCACAGATGTGGAAAGTGGGGTCCAGAGATG +
Preference number: 3 (lower is better)
Translates to: TERKLKGPLVQA*VHRCGKWGPEM
Trigger: CATCTCTGGACCCCACTTTCCACATCTGTGCACTCAAGCTTGGACTAGAGGACCTTTAAGTTTTCTTTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR-3UTR CAA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCGCAAAGAAGGCGTATTaGGAGACATCAGTGACCGAG +
Preference number: 3 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCAKKAY*ETSVTE
Trigger: CTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGC...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR TCA 72 bp CTTGAGTGCACAGATGTGGAAAGTGGGGTCCAGAGATaGAAGAACACTATTCAAGATCTCACAGCTTGTTTG +
Preference number: 3 (lower is better)
Translates to: LECTDVESGVQR*KNTIQDLTACL
Trigger: CAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGGACCCCACTTTCCACATCTGTGCACTCAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR TCA 72 bp GTCATAAGAAAAGAAGCCAGATACACCAGGGTTGACTaGGCAACAGACCCAGAACGATGCAGGTCAATAATA +
Preference number: 3 (lower is better)
Translates to: VIRKEARYTRVD*ATDPERCRSII
Trigger: TATTATTGACCTGCATCGTTCTGGGTCTGTTGCTCAGTCAACCCTGGTGTATCTGGCTTCTTTTCTTATGAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 72 bp TTTCTTGCCCACTGGCTTCAGGTTATGTTTTCCAAATaGGAGATTCAACATGGAAATTTGGGCGATGAGGTG +
Preference number: 3 (lower is better)
Translates to: FLAHWLQVMFSK*EIQHGNLGDEV
Trigger: CACCTCATCGCCCAAATTTCCATGTTGAATCTCTCATTTGGAAAACATAACCTGAAGCCAGTGGGCAAGAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 72 bp CTTCTATCTCAAGCAATTTTAGTATGGGGCCCACTTTaGTCAAGCATGACATGGAAGGCATACTCTTCTCAC +
Preference number: 3 (lower is better)
Translates to: LLSQAILVWGPL*SSMTWKAYSSH
Trigger: GTGAGAAGAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCTTGAGATAGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 72 bp GTGAGACAAAAAGACACAGTCTTACAGGAATCCAAGTaGCCCTTCCATCTAGACCATGCTGTAATCCTATTA +
Preference number: 3 (lower is better)
Translates to: VRQKDTVLQESK*PFHLDHAVILL
Trigger: TAATAGGATTACAGCATGGTCTAGATGGAAGGGTCACTTGGATTCCTGTAAGACTGTGTCTTTTTGTCTCAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 72 bp TATTTTCTTGTAAACAGGGGTCACCAATCAAGGGAATaGTTGCATATAAAGGAGAGCTGGCTGTATGGAATC +
Preference number: 3 (lower is better)
Translates to: YFLVNRGHQSRE*LHIKESWLYGI
Trigger: GATTCCATACAGCCAGCTCTCCTTTATATGCAATCATTCCCTTGATTGGTGACCCCTGTTTACAAGAAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR TCA 72 bp GAACTCCCTAGTAAGGCAATCCATTCCATTTTGTGCTaGAATACATGTTCTTATAACCTCAATCCTTTGTTT +
Preference number: 3 (lower is better)
Translates to: ELPSKAIHSILC*NTCSYNLNPLF
Trigger: AAACAAAGGATTGAGGTTATAAGAACATGTATTTCAGCACAAAATGGAATGGATTGCCTTACTAGGGAGTTC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR TCA 72 bp CCAGTTACTGATATTCGGTCAATCAACACTTTTAATTaGCTGATGGTCATCCAATTGTCTCCTTCAACTTTA +
Preference number: 3 (lower is better)
Translates to: PVTDIRSINTFN*LMVIQLSPSTL
Trigger: TAAAGTTGAAGGAGACAATTGGATGACCATCAGTCAATTAAAAGTGTTGATTGACCGAATATCAGTAACTGG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
3UTR TCA 72 bp TTCCAAATGAGAGATTCAACATGGAAATTTGGGCGATaGGGTGAGAAAGAGGAGTATATTTCTTCTCTATTT +
Preference number: 3 (lower is better)
Translates to: FQMRDSTWKFGR*GEKEEYISSLF
Trigger: AAATAGAGAAGAAATATACTCCTCTTTCTCACCTCATCGCCCAAATTTCCATGTTGAATCTCTCATTTGGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR GCA 72 bp CCAAGCTTATATAGTGGGGAAGCTGTATCTGTTATTTaGCACAGTTTTTATGCACTTATATCAATCAATGAG +
Preference number: 3 (lower is better)
Translates to: PSLYSGEAVSVI*HSFYALISINE
Trigger: CTCATTGATTGATATAAGTGCATAAAAACTGTGGCAAATAACAGATACAGCTTCCCCACTATATAAGCTTGG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCGGCGAGGGAGCGAGGTaGCCTGGCAGATTCGAGCGG +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGGEGAR*PGRFER
Trigger: CCGCTCGAATCTGCCAGGGCACCTCGCTCCCTCGCC...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAGGGCGCACAGGGGAGTaGGCACAGAGGCGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRGRTGE*AQRRAG
Trigger: TCCAGCCCGCCTCTGTGCCCACTCCCCTGTGCGCCC...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCGCCACCCCCAGCCGCTaGGCCGAGCTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PGRQFGSSGFKYSIASASATPSR*AELLLP
Trigger: CGGCAGCAGAAGCTCGGCTCAGCGGCTGGGGGTGGC...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR GCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCTGAGCCGAGCTTCTaGTGCCGCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGAEPSF*CRRCRC
Trigger: GCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTCAGC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTCACCCGTTCCGGGCTaGCCAGCACGCGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFSPVPG*PARALP
Trigger: AGGGAGGGCGCGTGCTGGCCAGCCCGGAACGGGTGA...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGGCCACCCCCAGCCGCTaGGCCGAGCTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: SSLGPGPLSEAWLSSGSLATPSR*AELLLP
Trigger: CGGCAGCAGAAGCTCGGCTCAGCGGCTGGGGGTGGC...CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAATGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGECWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGCCCACAGGGTCCCGCTaGCAGAGGCGAGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWPTGSR*QRRGSE
Trigger: CTCGCTCCCTCGCCTCTGGCAGCGGGACCCTGTGGG...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAACTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGELPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGCGGCATCCCCAGTGCTaGTGGATCCTGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGRHPQC*WILPSC
Trigger: GCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCG...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGCCTCGGCATCCCCAGTaGTGCTGGATCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGPRHPQ*CWILPS
Trigger: GGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGG...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACGAGCCGAGCTTCTGCTaGCGCCGCTGCCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: TSGTDKGANQEDARLDPDEPSFC*RRCRCA
Trigger: AGCGCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTC...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000377888.8
CDS-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGGAGCCGAGCTTCTGCTaGCGCCGCTGCCGCTGCGCT +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWEPSFC*RRCRCA
Trigger: AGCGCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTC...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCAGCTGAGCCGAGCTTCTaGTGCCGCCGCTGCCGCTGC +
Preference number: 4 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSAEPSF*CRRCRC
Trigger: GCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTCAGC...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGACATCCCCAGTGCTGCTaGATCCTGCCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRHPQCC*ILPSCT
Trigger: GGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATG...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGTCACCCGTTCCGGGCTaGCCAGCACGCGCCCTCCCT +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWSPVPG*PARALP
Trigger: AGGGAGGGCGCGTGCTGGCCAGCCCGGAACGGGTGA...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGGCACAGAGGCGGGCTaGAGCGATCTCACCCGTTCC +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSEGTEAG*SDLTRS
Trigger: GGAACGGGTGAGATCGCTCCAGCCCGCCTCTGTGCC...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGGCACAGAGGCGGGCTaGAGCGATCTCACCCGTTCC +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEGTEAG*SDLTRS
Trigger: GGAACGGGTGAGATCGCTCCAGCCCGCCTCTGTGCC...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACGGGCGCACAGGGGAGTaGGCACAGAGGCGGGCTGGA +
Preference number: 4 (lower is better)
Translates to: TSGTDKGANQEDARLDPDGRTGE*AQRRAG
Trigger: TCCAGCCCGCCTCTGTGCCCACTCCCCTGTGCGCCC...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000377888.8
CDS-3UTR GCA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGGCGAGGGAGCGAGGTaGCCTGGCAGATTCGAGCGG +
Preference number: 4 (lower is better)
Translates to: WTSGTDKGANQEDARLDPGEGAR*PGRFER
Trigger: CCGCTCGAATCTGCCAGGGCACCTCGCTCCCTCGCC...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR GCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQRAPGS*TGGRKA
Trigger: GGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCG...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATCGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: QRAPGSCTGGRKASGEENRAPGS*TGGRKA
Trigger: GGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCG...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCGGCATCCCCAGTGCTaGTGGATCCTGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFRHPQC*WILPSC
Trigger: GCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCGGGCCTAAGTGTCACTaGGCTGAGCAGCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGGPKCH*AEQPPK
Trigger: CTTTGGTGGCTGCTCAGCCCAGTGACACTTAGGCCC...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AGTGTCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGAGCACGCGCCCTCCCTaGCCGGAGCGCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: SVTGLSSHQRRSCWRVTLSTRPP*PERCSS
Trigger: AGATGAGCAGCGCTCCGGCCAGGGAGGGCGCGTGCT...CAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR CCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGCAGCCCCGGATCACCTaGGCTCGCCGCGCATCGTCC +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLQPRIT*ARRASS
Trigger: GGACGATGCGCGGCGAGCCCAGGTGATCCGGGGCTG...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGGGCCATTATGTCCCCTaGCTCCCTCCAGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQGHYVP*LPPAPP
Trigger: AGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCC...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGGTGGACGTCTGGGACTaGCAAGGGGGCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGVDVWD*QGGQPR
Trigger: TCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCAC...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGGGCGAGGGAGCGAGGTaGCCTGGCAGATTCGAGCGG +
Preference number: 4 (lower is better)
Translates to: SSLGPGPLSEAWLSSGSLGEGAR*PGRFER
Trigger: CCGCTCGAATCTGCCAGGGCACCTCGCTCCCTCGCC...CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCACTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: WTSGTDKGANQEDARLDPLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTCGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSRAPGS*TGGRKA
Trigger: GGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCG...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCCTCGGCATCCCCAGTaGTGCTGGATCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVPRHPQ*CWILPS
Trigger: GGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGGCCATTATGTCCCCTaGCTCCCTCCAGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWGHYVP*LPPAPP
Trigger: AGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCC...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSESAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAGGCCAACCAAGAGGATaGACGTTTGGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRGQPRG*TFGPRH
Trigger: GTGTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCC...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGTGGATCCTGCCCTCCTaGACCTTGGGGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWWILPS*TLGELQ
Trigger: CTGCAGCTCCCCCAAGGTGCAGGAGGGCAGGATCCA...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTGGATCCTGCCCTCCTaGACCTTGGGGGAGCTGCAG +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSWILPS*TLGELQ
Trigger: CTGCAGCTCCCCCAAGGTGCAGGAGGGCAGGATCCA...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACCAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHQQLRT*PSFGGM
Trigger: CATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTG...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGAAGGCAGGCAGGCCATaGCTTCTCGAGGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGKAGRP*LLEVAD
Trigger: GTCTGCTACCTCGAGAAGCCATGGCCTGCCTGCCTT...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGCCGGGACTTCTGCTATaGGGCATTCGCAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSEPGLLL*GIRKSH
Trigger: GTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCGG...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 72 bp GGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATaGCCTCGGCATCCCCAGTGCTGCTGGATCCTGCCC +
Preference number: 4 (lower is better)
Translates to: GGNLGPLASSTA*PRHPQCCWILP
Trigger: GGGCAGGATCCAGCAGCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 72 bp GGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATaGTCCCAGGGGCCTAAGTGTCACTGGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: GPLSEAWLSSGS*SQGPKCHWAEQ
Trigger: CTGCTCAGCCCAGTGACACTTAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR TCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: SQRKSPASTGFLHWRTESSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGAATGCTCAATGTGCCTaGGAATGGACCCGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGNAQCA*EWTRSG
Trigger: GCCAGAGCGGGTCCATTCTCAGGCACATTGAGCATT...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR TCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SQRKSPASTGFLHWRTESTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCGTGGACGTCTGGGACTaGCAAGGGGGCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: PGRQFGSSGFKYSIASASVDVWD*QGGQPR
Trigger: TCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCAC...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSEEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGGGGCCTAAGTGTCACTaGGCTGAGCAGCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWGPKCH*AEQPPK
Trigger: CTTTGGTGGCTGCTCAGCCCAGTGACACTTAGGCCC...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGGCATGGCTGTCTTCTaGGTCATTGTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVGMAVF*VIVPGA
Trigger: GGCCCCTGGGACAATGACCCAGAAGACAGCCATGCC...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCAGGAGCGACGCCTCTaGCTAAGACAGGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: SQRKSPASTGFLHWRTESQERRL*LRQEQR
Trigger: TCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGCATCCCCAGTGCTGCTaGATCCTGCCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLHPQCC*ILPSCT
Trigger: GGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATG...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PGRQFGSSGFKYSIASASPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGACCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSESSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGGCCACCACACTCCACTaGATCCCCCAAGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWATTLH*IPQDRL
Trigger: AAGCCTGTCTTGGGGGATGCAGTGGAGTGTGGTGGC...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR GCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCCACCACACTCCACTaGATCCCCCAAGACAGGCTT +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVATTLH*IPQDRL
Trigger: AAGCCTGTCTTGGGGGATGCAGTGGAGTGTGGTGGC...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR GCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATATCTCACAGCTTGTTTaGAGCACAGCCAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: QRAPGSCTGGRKASGEENISQLV*STARAA
Trigger: TGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGAT...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCCTTCCCGGGACTTCTaGTATGGGGCATTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFPSRDF*YGAFAR
Trigger: TCTTGCGAATGCCCCATAGCAGAAGTCCCGGGAAGG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGPLSEA*LSSGSL
Trigger: CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGG...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACCCTCTTTCGGAGGCATaGCTGTCTTCTGGGTCATTG +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHPLSEA*LSSGSL
Trigger: CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGG...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCACAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSQQLRT*PSFGGM
Trigger: CATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTG...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTCAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSQQLRT*PSFGGM
Trigger: CATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTG...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCAGCAGCTTAGGACCTaGCCCTCTTTCGGAGGCATG +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVQQLRT*PSFGGM
Trigger: CATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCAGGAGCGACGCCTCTaGCTAAGACAGGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWQERRL*LRQEQR
Trigger: TCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCCGGGACTTCTGCTATaGGGCATTCGCAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVPGLLL*GIRKSH
Trigger: GTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCGG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGAGCACGCGCCCTCCCTaGCCGGAGCGCTGCTCATCT +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTSTRPP*PERCSS
Trigger: AGATGAGCAGCGCTCCGGCCAGGGAGGGCGCGTGCT...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000377888.8
CDS-3UTR TCA 90 bp TATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: YGQFLEFLMMSPVQNGVQCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...CTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR TCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: QRAPGSCTGGRKASGEENGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATCGTGCTTAGAACGTaGGTGAGACAGATCAGACAC +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRIVLRT*VRQIRH
Trigger: GTGTCTGATCTGTCTCACTCACGTTCTAAGCACGAT...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACCCTCTAGTCCAAGCTTaGGTGCACAGATGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHPLVQA*VHRCGK
Trigger: CTTTCCACATCTGTGCACTCAAGCTTGGACTAGAGG...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: SQRKSPASTGFLHWRTESQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAACCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACTTTCAGCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: SRVPDDVPCAERCTEHFQLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...CTGAAAGTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR GCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGTCCCAGGGGCCTAGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: LALFRRHGCLLGHCPRGLGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...TAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR GCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCACCAAAGGAGAAGTTaGTGGCGGGTGACACTGACT +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFHQRRS*WRVTLT
Trigger: AGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: TSGTDKGANQEDARLDPDPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGGCCAACCAAGAGGATaGACGTTTGGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVGQPRG*TFGPRH
Trigger: GTGTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCC...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSEKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTAGAATGGACCCGCTCTaGCAGGCTTTGTCCAATACC +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGRMDPL*QALSNT
Trigger: GGTATTGGACAAAGCCTGCCAGAGCGGGTCCATTCT...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR CCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCAAAGGAGAAGTTGCTaGCGGGTGACACTGACTCTC +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWQRRSC*RVTLTL
Trigger: GAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCAAAGGAGAAGTTGCTaGCGGGTGACACTGACTCTC +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQQRRSC*RVTLTL
Trigger: GAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTG...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCAAAGGAGAAGTTGCTaGCGGGTGACACTGACTCTC +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFQRRSC*RVTLTL
Trigger: GAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAGCCACCCCCAGCCGCTaGGCCGAGCTTCTGCTGCCG +
Preference number: 4 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPATPSR*AELLLP
Trigger: CGGCAGCAGAAGCTCGGCTCAGCGGCTGGGGGTGGC...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR TCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KKAYLETSVTEIGRSKLSCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...CGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAATGGAGCATGTCCTaGAGAGGAGGACAGACATTG +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHKWSMS*RGGQTL
Trigger: CAATGTCTGTCCTCCTCTTCAGGACATGCTCCATTT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGGAGGGTCGTTCCTTTaGAACAAAGCCAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGGGSFL*NKAKRQ
Trigger: CTGCCTTTTGGCTTTGTTTCAAAGGAACGACCCTCC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCGGAGGGTCGTTCCTTTaGAACAAAGCCAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFGGSFL*NKAKRQ
Trigger: CTGCCTTTTGGCTTTGTTTCAAAGGAACGACCCTCC...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCATCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: WTSGTDKGANQEDARLDPSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCACCAAAGGAGAAGTTaGTGGCGGGTGACACTGACT +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVHQRRS*WRVTLT
Trigger: AGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATGCTTCCCTCCAGAGTTaGTGTGGAGACCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: QRAPGSCTGGRKASGEENASLQS*CGDHFP
Trigger: AGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGC...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCTTCCCTCCAGAGTTaGTGTGGAGACCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGASLQS*CGDHFP
Trigger: AGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGACGGCATCCCCAGTGCTaGTGGATCCTGCCCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRRHPQC*WILPSC
Trigger: GCAGGAGGGCAGGATCCAGCAGCACTGGGGATGCCG...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTCCTCGGCATCCCCAGTaGTGCTGGATCCTGCCCTCC +
Preference number: 4 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSPRHPQ*CWILPS
Trigger: GGAGGGCAGGATCCAGCAGCACTGGGGATGCCGAGG...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGGCCACCACACTCCACTaGATCCCTCTTCCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLATTLH*IPLPQK
Trigger: TTTCTGGGGAAGAGGGATGCAGTGGAGTGTGGTGGC...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR CCA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: QRAPGSCTGGRKASGEENKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCAAAGGAGAAGTTGCTaGCGGGTGACACTGACTCTC +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWQRRSC*RVTLTL
Trigger: GAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTG...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGAAGTGTGTTAGCGTCTaGCACAGAACAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQKCVSV*HRTGRR
Trigger: TCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTT...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGACACAGATGTGGAAAGTaGGGTCCAGAGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRHRCGK*GPEMKE
Trigger: TTCTTTCATCTCTGGACCCCACTTTCCACATCTGTG...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCAGTCAGAATCTCACATaGCTCTGGGTTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGSQNLT*LWVWHL
Trigger: TAAATGCCAAACCCAGAGCCATGTGAGATTCTGACT...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACAGCCCCGGATCACCTaGGCTCGCCGCGCATCGTCC +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKQPRIT*ARRASS
Trigger: GGACGATGCGCGGCGAGCCCAGGTGATCCGGGGCTG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000377888.8
3UTR CAA 72 bp CTCACAGCTTGTTTGCAGCACAGCCAGGGCGGCAATTaGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGG +
Preference number: 4 (lower is better)
Translates to: LTACLQHSQGGN*GPLASSTALPR
Trigger: CCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACTTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: SSLGPGPLSEAWLSSGSLKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGTCCCAGGGGCCTAAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LALFRRHGCLLGHCPRGLNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...TAGGCCCCTGGGACAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR TCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: KHDSRDSGSLCMGSFSSSCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...GGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: PSEHRVPALADGKPQVKRGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: QRAPGSCTGGRKASGEENINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTATCAGACACAGTGAGTaGCGGGAACATGTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSIRHSE*REHVRD
Trigger: GTCTCTGACATGTTCCCGTCACTCACTGTGTCTGAT...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACGAGGGAGTATTTTGTTaGTATCTGGAAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHEGVFC*YLEAHT
Trigger: TGTGTGGGCTTCCAGATATCAACAAAATACTCCCTC...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGAGACCATTTTCCTCTaGCAGATCTCTGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: WTSGTDKGANQEDARLDPETIFL*QISDPV
Trigger: CACAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTC...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGGAGGGTCGTTCCTTTaGAACAAAGCCAAAAGGCAG +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVGGSFL*NKAKRQ
Trigger: CTGCCTTTTGGCTTTGTTTCAAAGGAACGACCCTCC...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp ACCCTCAGGTTTCTGAAGCCGGGTGAAGCAGCCTCCACAGCAGTAAGTTCCAGATCCAGGGGGAAGCTTTaGGGCCTACAGACTGCTCAT +
Preference number: 4 (lower is better)
Translates to: TLRFLKPGEAASTAVSSRSRGKL*GLQTAH
Trigger: ATGAGCAGTCTGTAGGCCTCAAAGCTTCCCCCTGGA...TCTGGAACTTACTGCTGTGGAGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCACCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: WTSGTDKGANQEDARLDPPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGTGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGCACCAAAGGAGAAGTTaGTGGCGGGTGACACTGACT +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLHQRRS*WRVTLT
Trigger: AGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTG...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp TCTTCTGGGTCATTGTCCCAGGGGCCTAAGTGTCACTGGGCTGAGCAGCCACCAGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: SSGSLSQGPKCHWAEQPPEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...TGGTGGCTGCTCAGCCCAGTGACACTTAGGCCCCTGGGACAATGACCCAGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR CCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACCCTCCAGAGTTGCTGTaGAGACCATTTTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: TSGTDKGANQEDARLDPDPPELL*RPFSSD
Trigger: GTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGG...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCAACAGTTATCTCCTTTaGCAGCAACAAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGNSYLL*QQQSQI
Trigger: AATCTGGCTTTGTTGCTGCCAAAGGAGATAACTGTT...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGTGCCCTCCTGCACCTTaGGGGAGCTGCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTCPPAP*GSCRGK
Trigger: TTTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCA...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAACATCCCCAGTGCTGCTaGATCCTGCCCTCCTGCACC +
Preference number: 4 (lower is better)
Translates to: RDFCYGAFARATDSALNKHPQCC*ILPSCT
Trigger: GGTGCAGGAGGGCAGGATCCAGCAGCACTGGGGATG...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
3UTR CAA 72 bp GGCACAGAACAGGGCGAAGAAGAGGCAGGGGATAGCTaGAACATGGCTGTGACGGACGTGACCAAGCAAGTA +
Preference number: 4 (lower is better)
Translates to: GTEQGEEEAGDS*NMAVTDVTKQV
Trigger: TACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTCTTCTTCGCCCTGTTCTGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VYGQFLEFLMMSPVQNGVPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...TACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: TSGTDKGANQEDARLDPDDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSEGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGAGGGAGTATTTTGTTaGTATCTGGAAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGEGVFC*YLEAHT
Trigger: TGTGTGGGCTTCCAGATATCAACAAAATACTCCCTC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAAAATGGAGCATGTCCTaGAGAGGAGGACAGACATTG +
Preference number: 4 (lower is better)
Translates to: WTSGTDKGANQEDARLDPKWSMS*RGGQTL
Trigger: CAATGTCTGTCCTCCTCTTCAGGACATGCTCCATTT...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACTCATGGGAAAGATCCTaGAGCCTAATAAACACCTAC +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHSWERS*SLINTY
Trigger: GTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGA...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: SSLGPGPLSEAWLSSGSLQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp ATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: MIPGILGHCVWAVSRVPDLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...ATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGGGCATGGCTGTCTTCTaGGTCATTGTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: KKAYLETSVTEIGRSKLSGMAVF*VIVPGA
Trigger: GGCCCCTGGGACAATGACCCAGAAGACAGCCATGCC...CGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCAAAAGCAGAGAATCTaGGAAGAGGGAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWQKQRI*EEGVLG
Trigger: TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTG...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGAAGTGTGTTAGCGTCTaGCACAGAACAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLKCVSV*HRTGRR
Trigger: TCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTT...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATGCCCTCCTGCACCTTaGGGGAGCTGCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRCPPAP*GSCRGK
Trigger: TTTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCA...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCACAGATGTGGAAAGTaGGGTCCAGAGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQHRCGK*GPEMKE
Trigger: TTCTTTCATCTCTGGACCCCACTTTCCACATCTGTG...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGAAGGCAGGCAGGCCATaGCTTCTCGAGGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTKAGRP*LLEVAD
Trigger: GTCTGCTACCTCGAGAAGCCATGGCCTGCCTGCCTT...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTTCTGAAGGACAAAGCTaGAAAGGTCAGGGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGSEGQS*KGQGSK
Trigger: TTTAGACCCCTGACCTTTCCAGCTTTGTCCTTCAGA...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTCTGAAGGACAAAGCTaGAAAGGTCAGGGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFSEGQS*KGQGSK
Trigger: TTTAGACCCCTGACCTTTCCAGCTTTGTCCTTCAGA...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTCCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp GGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: GILGHCVWAVSRVPDDVPSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...GGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAAGGCCATTATGTCCCCTaGCTCCCTCCAGCGCCACCT +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKGHYVP*LPPAPP
Trigger: AGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCC...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGATCGTGCTTAGAACGTaGGTGAGACAGATCAGACAC +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLIVLRT*VRQIRH
Trigger: GTGTCTGATCTGTCTCACTCACGTTCTAAGCACGAT...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGAGGGAGTATTTTGTTaGTATCTGGAAGCCCACACA +
Preference number: 4 (lower is better)
Translates to: VPALADGKPQVKRIPGAVEGVFC*YLEAHT
Trigger: TGTGTGGGCTTCCAGATATCAACAAAATACTCCCTC...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCCACTGACTCAGCTTTaGATAAAAGACATCCAGATT +
Preference number: 4 (lower is better)
Translates to: SQRKSPASTGFLHWRTESPLTQL*IKDIQI
Trigger: AATCTGGATGTCTTTTATTCAAAGCTGAGTCAGTGG...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CAGAAATGTGGCAATGGTTGTGCCTCCAGCAGACCCATAACAGCAAGGAGGATCAAACGGAGAAGCATGTaGGAGGCGTACGAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: QKCGNGCASSRPITARRIKRRSM*EAYEVA
Trigger: TGCCACCTCGTACGCCTCTCACATGCTTCTCCGTTT...GATCCTCCTTGCTGTTATGGGTCTGCTGGAGGCACAACCATTGCCACATTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCCCCACAGGGTCCCGCTaGCAGAGGCGAGGGAGCGAG +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCPTGSR*QRRGSE
Trigger: CTCGCTCCCTCGCCTCTGGCAGCGGGACCCTGTGGG...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR GCA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: HRVPALADGKPQVKRIPGTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp CAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: QGFWVIVYGQFLEFLMMSSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...GGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGGAAGAGAATACCGGGTaGAGTCGCGCACAAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTEENTG*SRAQAA
Trigger: TGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTC...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACAATCTCACAGCTTGTTTaGAGCACAGCCAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTISQLV*STARAA
Trigger: TGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGAT...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACACCTTCCCGGGACTTCTaGTATGGGGCATTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTPSRDF*YGAFAR
Trigger: TCTTGCGAATGCCCCATAGCAGAAGTCCCGGGAAGG...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCAGAATGGACCCGCTCTaGCAGGCTTTGTCCAATACC +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGRMDPL*QALSNT
Trigger: GGTATTGGACAAAGCCTGCCAGAGCGGGTCCATTCT...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR CCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAGGGCCTAAGTGTCACTaGGCTGAGCAGCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRGPKCH*AEQPPK
Trigger: CTTTGGTGGCTGCTCAGCCCAGTGACACTTAGGCCC...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGGGGCCTAAGTGTCACTaGGCTGAGCAGCCACCAAAG +
Preference number: 4 (lower is better)
Translates to: KKAYLETSVTEIGRSKLSGPKCH*AEQPPK
Trigger: CTTTGGTGGCTGCTCAGCCCAGTGACACTTAGGCCC...CGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGCAAAAGCAGAGAATCTaGGAAGAGGGAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLQKQRI*EEGVLG
Trigger: TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTG...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGCAGGAGCGACGCCTCTaGCTAAGACAGGAACAGAGA +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREQERRL*LRQEQR
Trigger: TCTCTGTTCCTGTCTTAGCCAGAGGCGTCGCTCCTG...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCACCCTGTGTCTTCCATaGAAAATAAATGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: SQRKSPASTGFLHWRTESTLCLP*KINGAC
Trigger: ACATGCTCCATTTATTTTCCATGGAAGACACAGGGT...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACCACAGATGTGGAAAGTaGGGTCCAGAGATGAAAGAA +
Preference number: 4 (lower is better)
Translates to: TSGTDKGANQEDARLDPDHRCGK*GPEMKE
Trigger: TTCTTTCATCTCTGGACCCCACTTTCCACATCTGTG...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAAAAGGCAGGCAGGCCATaGCTTCTCGAGGTAGCAGAC +
Preference number: 4 (lower is better)
Translates to: RDFCYGAFARATDSALNKKAGRP*LLEVAD
Trigger: GTCTGCTACCTCGAGAAGCCATGGCCTGCCTGCCTT...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CAGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTCCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: QKHDSRDSGSLCMGSFSSPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...ACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CVWAVSRVPDDVPCAERCGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...ACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAAACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: RDFCYGAFARATDSALNKTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACTTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCCCACTGACTCAGCTTTaGATAAAAGACATCCAGATT +
Preference number: 4 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFPLTQL*IKDIQI
Trigger: AATCTGGATGTCTTTTATTCAAAGCTGAGTCAGTGG...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCTTCCCCAGAAATGTTaGCTAATGAACATTCAGTTC +
Preference number: 4 (lower is better)
Translates to: HLLESQRKSPASTGFLHWLPQKC*LMNIQF
Trigger: GAACTGAATGTTCATTAGTCAACATTTCTGGGGAAG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR GCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp TCTTCTGGGTCATTGTCCCAGGGGCCTAAGTGTCACTGGGCTGAGCAGCCACCAACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: SSGSLSQGPKCHWAEQPPTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...TGGTGGCTGCTCAGCCCAGTGACACTTAGGCCCCTGGGACAATGACCCAGAAGA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR GCA 90 bp GTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTATCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: VYGQFLEFLMMSPVQNGVSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...TACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: YGQFLEFLMMSPVQNGVQGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...CTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR GCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAAGGCCAACCAAGAGGATaGACGTTTGGACCCAGACAC +
Preference number: 4 (lower is better)
Translates to: RDFCYGAFARATDSALNKGQPRG*TFGPRH
Trigger: GTGTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCC...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAATCTCACAGCTTGTTTaGAGCACAGCCAGGGCGGCA +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRISQLV*STARAA
Trigger: TGCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGAT...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCCTTGAACCAGCTCAATaGCACCAAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGLEPAQ*HQRASP
Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAG...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: PGILGHCVWAVSRVPDDVQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...GACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAAGGCATGGCTGTCTTCTaGGTCATTGTCCCAGGGGCC +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKGMAVF*VIVPGA
Trigger: GGCCCCTGGGACAATGACCCAGAAGACAGCCATGCC...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTTCCAGCGCCACCTGCTaGAATCTCAGAGGAAAAGCC +
Preference number: 4 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSSSATC*NLRGKA
Trigger: GGCTTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGA...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCACCCTGTGTCTTCCATaGAAAATAAATGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFTLCLP*KINGAC
Trigger: ACATGCTCCATTTATTTTCCATGGAAGACACAGGGT...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCAGTCAGAATCTCACATaGCTCTGGGTTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: PGRQFGSSGFKYSIASASSQNLT*LWVWHL
Trigger: TAAATGCCAAACCCAGAGCCATGTGAGATTCTGACT...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTAGTCAGAATCTCACATaGCTCTGGGTTTGGCATTTA +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSSQNLT*LWVWHL
Trigger: TAAATGCCAAACCCAGAGCCATGTGAGATTCTGACT...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTCCCTGCTCTGCCATaGAGCTCTGTGACCTGCACT +
Preference number: 4 (lower is better)
Translates to: NSKYASVELIELEAAEVQLPALP*SSVTCT
Trigger: AGTGCAGGTCACAGAGCTCCATGGCAGAGCAGGGAG...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: GFWVIVYGQFLEFLMMSPKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...AGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp CAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: QGFWVIVYGQFLEFLMMSKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...GGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGATCAGACACAGTGAGTaGCGGGAACATGTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREIRHSE*REHVRD
Trigger: GTCTCTGACATGTTCCCGTCACTCACTGTGTCTGAT...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAGTGGACGTCTGGGACTaGCAAGGGGGCCAACCAAGA +
Preference number: 4 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPVDVWD*QGGQPR
Trigger: TCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCAC...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCAAATGGAGCATGTCCTaGAGAGGAGGACAGACATTG +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGKWSMS*RGGQTL
Trigger: CAATGTCTGTCCTCCTCTTCAGGACATGCTCCATTT...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCCCACTGACTCAGCTTTaGATAAAAGACATCCAGATT +
Preference number: 4 (lower is better)
Translates to: PGRQFGSSGFKYSIASASPLTQL*IKDIQI
Trigger: AATCTGGATGTCTTTTATTCAAAGCTGAGTCAGTGG...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTCCTCAATCAGAAGCATaGTTCCAGGGATTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: CVWAVSRVPDDVPCAERCPQSEA*FQGFWV
Trigger: GACCCAGAATCCCTGGAATCATGCTTCTGATTGAGG...ACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR GCA 90 bp GGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: GILGHCVWAVSRVPDDVPFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...GGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: APGSCTGGRKASGEENTGMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR GCA 90 bp AGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RSMIPGILGHCVWAVSRVSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...AACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp CATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: HCVWAVSRVPDDVPCAERWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...CCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCCGAGCACCGGGTTCCTaGACTGGCGGACGGAAAGCC +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCRAPGS*TGGRKA
Trigger: GGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCG...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACACTTGAACCAGCTCAATaGCACCAAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTLEPAQ*HQRASP
Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAG...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGCTTGAACCAGCTCAATaGCACCAAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLERELEPAQ*HQRASP
Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAG...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACACACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACTCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: QFLEFLMMSPVQNGVQSTHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...AGTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR CCA 90 bp GGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAAGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: GHCVWAVSRVPDDVPCAEGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...TTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCCAAAAGCAGAGAATCTaGGAAGAGGGAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGQKQRI*EEGVLG
Trigger: TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTG...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGAAGTGTGTTAGCGTCTaGCACAGAACAGGGCGAAGA +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREKCVSV*HRTGRR
Trigger: TCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTT...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGAACAGTTATCTCCTTTaGCAGCAACAAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWNSYLL*QQQSQI
Trigger: AATCTGGCTTTGTTGCTGCCAAAGGAGATAACTGTT...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGGCATTTGGATGGTTTaGTCAATCTTCTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: HKQQLRTWPSFGGMAVFWGIWMV*SIFSSL
Trigger: TAAGGAAGAGAAGATTGACCAAACCATCCAAATGCC...CCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTGGCATTTGGATGGTTTaGTCAATCTTCTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: KRIPGAVAHKQQLRTWPSGIWMV*SIFSSL
Trigger: TAAGGAAGAGAAGATTGACCAAACCATCCAAATGCC...AGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCAGAGAGGCGTACGAGGTaGCACATACTCAGGGCTAGT +
Preference number: 4 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSERRTR*HILRAS
Trigger: ACTAGCCCTGAGTATGTGCCACCTCGTACGCCTCTC...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp ACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACGGTCTCAGGAGGACCTaGTCTAATTCACCCTGGATG +
Preference number: 4 (lower is better)
Translates to: TQMLQFPNRTVSKSMEAHGLRRT*SNSPWM
Trigger: CATCCAGGGTGAATTAGACCAGGTCCTCCTGAGACC...GTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp ACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACGGAGAGCTGGCTGTATaGAATCCAGCACAAGACCAG +
Preference number: 4 (lower is better)
Translates to: TQMLQFPNRTVSKSMEAHGELAV*NPAQDQ
Trigger: CTGGTCTTGTGCTGGATTCCATACAGCCAGCTCTCC...GTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACTGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: QFLEFLMMSPVQNGVQSTEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...AGTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR TCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACTTTCAGAAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: LEFLMMSPVQNGVQSTFRNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...TCTGAAAGTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR TCA 90 bp ATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: IPGILGHCVWAVSRVPDDSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...ATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HCVWAVSRVPDDVPCAERDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...CCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp TCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACTTTCAGATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: SRVPDDVPCAERCTEHFQINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...CTGAAAGTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR TCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAATCAGACACAGTGAGTaGCGGGAACATGTCAGAGAC +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRIRHSE*REHVRD
Trigger: GTCTCTGACATGTTCCCGTCACTCACTGTGTCTGAT...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACAATCGTGCTTAGAACGTaGGTGAGACAGATCAGACAC +
Preference number: 4 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTIVLRT*VRQIRH
Trigger: GTGTCTGATCTGTCTCACTCACGTTCTAAGCACGAT...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTGAGACCATTTTCCTCTaGCAGATCTCTGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSETIFL*QISDPV
Trigger: CACAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTC...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAACCTCTAGTCCAAGCTTaGGTGCACAGATGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RDFCYGAFARATDSALNKPLVQA*VHRCGK
Trigger: CTTTCCACATCTGTGCACTCAAGCTTGGACTAGAGG...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp ACCCTCAGGTTTCTGAAGCCGGGTGAAGCAGCCTCCACAGCAGTAAGTTCCAGACACCAATCAAGGGAATaGTTGCATATAAAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: TLRFLKPGEAASTAVSSRHQSRE*LHIKES
Trigger: GCTCTCCTTTATATGCAATCATTCCCTTGATTGGTG...TCTGGAACTTACTGCTGTGGAGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACAGATACACCAGGGTTaGCTGAGCAACAGACCCAGA +
Preference number: 4 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSQIHQG*LSNRPR
Trigger: TCTGGGTCTGTTGCTCAGTCAACCCTGGTGTATCTG...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp ACCCTCAGGTTTCTGAAGCCGGGTGAAGCAGCCTCCACAGCAGTAAGTTCCAGAGCTATTTGCATCCGCTaGTTTGCACAAGTCCTAATA +
Preference number: 4 (lower is better)
Translates to: TLRFLKPGEAASTAVSSRAICIR*FAQVLI
Trigger: TATTAGGACTTGTGCAAATCAGCGGATGCAAATAGC...TCTGGAACTTACTGCTGTGGAGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp GCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGACTCTCCCACTACACTTTTAATTGACTaGTGGTCATCCAATTGTCTC +
Preference number: 4 (lower is better)
Translates to: AEQPPKEKLLAGDTDSPTTLLID*WSSNCL
Trigger: GAGACAATTGGATGACCATCAGTCAATTAAAAGTGT...AGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR TCA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGAGTTCTTCCAGTTACTaGTATTCGGTCAATCAACAC +
Preference number: 4 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLSSSSY*YSVNQH
Trigger: GTGTTGATTGACCGAATATCAGTAACTGGAAGAACT...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR GCA 90 bp CAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: QGFWVIVYGQFLEFLMMSQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...GGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp GGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: GHCVWAVSRVPDDVPCAEPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...TTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp CAGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: QKHDSRDSGSLCMGSFSSSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...ACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTTGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTGCTTCCCTCCAGAGTTaGTGTGGAGACCATTTTCCT +
Preference number: 4 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSASLQS*CGDHFP
Trigger: AGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGC...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACCTTCCCGGGACTTCTaGTATGGGGCATTCGCAAGA +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKPSRDF*YGAFAR
Trigger: TCTTGCGAATGCCCCATAGCAGAAGTCCCGGGAAGG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCAGATAGAGCTGGAGGCTaGAGAGGTTCAGCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSDRAGG*RGSAWQ
Trigger: TTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATC...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: QGFWVIVYGQFLEFLMMSKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...GGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp GGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: GFWVIVYGQFLEFLMMSPHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...AGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp ATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: ILGHCVWAVSRVPDDVPCGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...ACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp ATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: IPGILGHCVWAVSRVPDDQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...ATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp GGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAAGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: GHCVWAVSRVPDDVPCAEEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...TTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGCAAAAGCAGAGAATCTaGGAAGAGGGAGTGTTGGGA +
Preference number: 4 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTQKQRI*EEGVLG
Trigger: TCCCAACACTCCCTCTTCCCAGATTCTCTGCTTTTG...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGTGCCCTCCTGCACCTTaGGGGAGCTGCAGGGGAAAA +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGCPPAP*GSCRGK
Trigger: TTTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCA...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGTTTTTGGCATTTGGATaGTTTGGTCAATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQFLAFG*FGQSSL
Trigger: AAGAGAAGATTGACCAAACCATCCAAATGCCAAAAA...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR CCA 90 bp AGCAATTTTAGTATGGGGCCCACTTTGATCAAGCATGACATGGAAGGCATACTCCAACATCCACGCTGCTaGTCTCAGGAGGACCTGGTC +
Preference number: 4 (lower is better)
Translates to: SNFSMGPTLIKHDMEGILQHPRC*SQEDLV
Trigger: GACCAGGTCCTCCTGAGACCAGCAGCGTGGATGTTG...GAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp GGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCCTGGGTCATTGTGTATaGGCAGTTTCTCGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: GILGHCVWAVSRVPDDVPLGHCV*AVSRVP
Trigger: AGGAACTCGAGAAACTGCCCATACACAATGACCCAG...GGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
3UTR CAA 72 bp GAGCAACAGCAAATGGTTCCAGAAATGTGGCAATGGTaGTGCCTCCAGCAGACCCATAACAGCAAGGAGGAT +
Preference number: 4 (lower is better)
Translates to: EQQQMVPEMWQW*CLQQTHNSKED
Trigger: ATCCTCCTTGCTGTTATGGGTCTGCTGGAGGCACAACCATTGCCACATTTCTGGAACCATTTGCTGTTGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGTTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLERELFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAAATGCTCAATGTGCCTaGGAATGGACCCGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPNAQCA*EWTRSG
Trigger: GCCAGAGCGGGTCCATTCTCAGGCACATTGAGCATT...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR TCA 90 bp AGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGTTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 4 (lower is better)
Translates to: SSLGPGPLSEAWLSSGSLLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR TCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCAGTGGGGTCCAGAGATaGAAGAACACTATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGSGVQR*KNTIQD
Trigger: ATCTTGAATAGTGTTCTTTCATCTCTGGACCCCACT...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTCAGCCCCTACTACCTaGTGCCTCACTGGTGGTGAT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPSAPTT*CLTGGD
Trigger: ATCACCACCAGTGAGGCATCAGGTAGTAGGGGCTGA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp ACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACCAGCAAGGAGGATCATaGGGCTTCTTGACCTCTTTA +
Preference number: 4 (lower is better)
Translates to: TQMLQFPNRTVSKSMEAHQQGGS*GFLTSL
Trigger: TAAAGAGGTCAAGAAGCCTCATGATCCTCCTTGCTG...GTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AAAATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGGCACCCTCAGGTTTCTaGAGCCGGGTGAAGCAGCCT +
Preference number: 4 (lower is better)
Translates to: KIHHNTTLCVFQGTRLGLAPSGF*SRVKQP
Trigger: AGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGTGC...CAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp AAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: KHDSRDSGSLCMGSFSSSFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...GGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp CAGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: QKHDSRDSGSLCMGSFSSQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...ACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp GCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: AVSRVPDDVPCAERCTEHTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...GTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR GCA 90 bp ATCAGAAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: IRSMIPGILGHCVWAVSRGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...TCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR GCA 90 bp TGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACATTAGCAGCACGACAGCTGGACTaGAGGCACACAAGTTTAGCT +
Preference number: 4 (lower is better)
Translates to: CSNSQTELCPSPWKLTLAARQLD*RHTSLA
Trigger: AGCTAAACTTGTGTGCCTGCAGTCCAGCTGTCGTGC...TGCTAATGTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp ATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: ILGHCVWAVSRVPDDVPCEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...ACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTCCATGTACCTCCTCTaGGCTCTCAGCCCCTACTAC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPSMYLL*ALSPYY
Trigger: GTAGTAGGGGCTGAGAGCCCAGAGGAGGTACATGGA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp CAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTACAGAGCACTGAGTTAGACAGGAACTaGTCTATTGCAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: QFLEFLMMSPVQNGVQSTELDRN*SIAEEQ
Trigger: CTGCTCTTCTGCAATAGACCAGTTCCTGTCTAACTC...AGTGCTCTGTACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS-3UTR TCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGGGAAATAAGCATGAGTaGGTTGGATTTCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLEREGNKHE*VGFQCP
Trigger: TGGGCATTGAAATCCAACTCACTCATGCTTATTTCC...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTGCTGGTCTGCCGACTaGGGCCTGCTCTCGGAGGAG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTCWSAD*GLLSEE
Trigger: CTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp GGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: GILGHCVWAVSRVPDDVPGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...GGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACCTCTAGTCCAAGCTTaGGTGCACAGATGTGGAAAG +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKPLVQA*VHRCGK
Trigger: CTTTCCACATCTGTGCACTCAAGCTTGGACTAGAGG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp GGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTATGAACCCAGGAAAGTaGAGTAGGGAAAACGGAGAA +
Preference number: 4 (lower is better)
Translates to: GTDRAGGCRGSAWQAKQSMNPGK*SRENGE
Trigger: TTCTCCGTTTTCCCTACTTCACTTTCCTGGGTTCAT...ACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp GGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTTTCTCCGTCTTGGAATaGACCCAGGAAAGTGAAGTA +
Preference number: 4 (lower is better)
Translates to: GTDRAGGCRGSAWQAKQSFSVLE*TQESEV
Trigger: TACTTCACTTTCCTGGGTTCATTCCAAGACGGAGAA...ACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTAATTCACCCTGGATaGTCATGGAAGAGAGGTCTC +
Preference number: 4 (lower is better)
Translates to: NSKYASVELIELEAAEVQLIHPG*SWKRGL
Trigger: GAGACCTCTCTTCCATGATCATCCAGGGTGAATTAG...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGATGAGGTTCAGAAGTaGTGCCAGGGTGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPDEVQK*CQGDLF
Trigger: GAACAGGTCACCCTGGCATCACTTCTGAACCTCATC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp TGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACATTAGCAGTATGGGGCCCACTTTaGTCAAGCATGACATGGAAG +
Preference number: 4 (lower is better)
Translates to: CSNSQTELCPSPWKLTLAVWGPL*SSMTWK
Trigger: CTTCCATGTCATGCTTGATCAAAGTGGGCCCCATAC...TGCTAATGTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: ETSVTEIGRSKLSCLERETYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp GGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: GILGHCVWAVSRVPDDVPTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...GGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTLPTEA*SRRRLL
Trigger: CAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp TGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACATTAGCAATGTGGCAATGGTTGTaGCTCCAGCAGACCCATAAC +
Preference number: 4 (lower is better)
Translates to: CSNSQTELCPSPWKLTLAMWQWL*LQQTHN
Trigger: GTTATGGGTCTGCTGGAGGCACAACCATTGCCACAT...TGCTAATGTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCAACAGTTATCTCCTTTaGCAGCAACAAAGCCAGATT +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGNSYLL*QQQSQI
Trigger: AATCTGGCTTTGTTGCTGCCAAAGGAGATAACTGTT...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCCCGGGACTTCTGCTATaGGGCATTCGCAAGAGCCAC +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCPGLLL*GIRKSH
Trigger: GTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCGG...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGATCCAGGCACGACAGCTaGACTGCAGGCACACAAGTT +
Preference number: 4 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRSRHDS*TAGTQV
Trigger: AACTTGTGTGCCTGCAGTCCAGCTGTCGTGCCTGGA...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCCCACAGGGTCCTTTTaGATATACAACATCCACGCT +
Preference number: 4 (lower is better)
Translates to: NSKYASVELIELEAAEVQPTGSF*IYNIHA
Trigger: AGCGTGGATGTTGTATATCCAAAAGGACCCTGTGGG...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp AAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCCTGGGTCATTGTGTATaGGCAGTTTCTCGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: KHDSRDSGSLCMGSFSSSLGHCV*AVSRVP
Trigger: AGGAACTCGAGAAACTGCCCATACACAATGACCCAG...GGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAGGAAATAAGCATGAGTaGGTTGGATTTCAATGCCCA +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRGNKHE*VGFQCP
Trigger: TGGGCATTGAAATCCAACTCACTCATGCTTATTTCC...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp ATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTTTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: ILGHCVWAVSRVPDDVPCLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...ACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp ATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: IPGILGHCVWAVSRVPDDCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...ATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp ATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: IPGILGHCVWAVSRVPDDINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...ATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCACGGAAAGCCTCAGGTaGAGAGAATACCGGGTGCAG +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCTESLR*REYRVQ
Trigger: CTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGT...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCTTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAGAGACCATTTTCCTCTaGCAGATCTCTGACCCTGTG +
Preference number: 4 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPETIFL*QISDPV
Trigger: CACAGGGTCAGAGATCTGTCAGAGGAAAATGGTCTC...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAAGTGGGGTCCAGAGATaGAAGAACACTATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRSGVQR*KNTIQD
Trigger: ATCTTGAATAGTGTTCTTTCATCTCTGGACCCCACT...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCCTCAATCAGAAGCATaGTTCCAGGGATTCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPPQSEA*FQGFWV
Trigger: GACCCAGAATCCCTGGAATCATGCTTCTGATTGAGG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGAAGTGATGCCAGGGTaGCCTGTTCATGCAAACATG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPEVMPG*PVHANM
Trigger: CATGTTTGCATGAACAGGTCACCCTGGCATCACTTC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGATACACCAGGGTTGACTaGGCAACAGACCCAGAACGA +
Preference number: 4 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRYTRVD*ATDPER
Trigger: TCGTTCTGGGTCTGTTGCTCAGTCAACCCTGGTGTA...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACCTGTGCTTGCAAAGTaGGACAAAAAGACACAGTCT +
Preference number: 4 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSPVLAK*DKKTQS
Trigger: AGACTGTGTCTTTTTGTCTCACTTTGCAAGCACAGG...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGCACCAAAGGAGAAGTTaGTGGCGGGTGACACTGACT +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGHQRRS*WRVTLT
Trigger: AGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTG...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCCCCTCCAGCGCCACCTaGTGGAATCTCAGAGGAAAA +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCPSSAT*WNLRGK
Trigger: TTTTCCTCTGAGATTCCAGCAGGTGGCGCTGGAGGG...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp ACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACCAGTTTCCATTTTCCTaGCTGGACACTGACAAATAC +
Preference number: 4 (lower is better)
Translates to: TQMLQFPNRTVSKSMEAHQFPFS*LDTDKY
Trigger: GTATTTGTCAGTGTCCAGGCAGGAAAATGGAAACTG...GTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGAACATCTCCTTCTCCCTaGTCTGCCATGGAGCTCTGT +
Preference number: 4 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRTSPSP*SAMELC
Trigger: ACAGAGCTCCATGGCAGAGCAGGGAGAAGGAGATGT...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp AGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTCAGGACACTTTTTTCAGACTTTCTTaGCCACTGGCTTCAGGTTAT +
Preference number: 4 (lower is better)
Translates to: RAGGCRGSAWQAKQSQDTFFRLS*PLASGY
Trigger: ATAACCTGAAGCCAGTGGGCAAGAAAGTCTGAAAAA...AGTGTCCTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp ACCCTCAGGTTTCTGAAGCCGGGTGAAGCAGCCTCCACAGCAGTAAGTTCCAGAGCTGTATCTGTTATTTaGCACAGTTTTTATGCACTT +
Preference number: 4 (lower is better)
Translates to: TLRFLKPGEAASTAVSSRAVSVI*HSFYAL
Trigger: AAGTGCATAAAAACTGTGGCAAATAACAGATACAGC...TCTGGAACTTACTGCTGTGGAGGCTGCTTCACCCGGCTTCAGAAACCTGAGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp ACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACATCACAGCCTGTGCTTaGAAAGTGAGACAAAAAGAC +
Preference number: 4 (lower is better)
Translates to: TQMLQFPNRTVSKSMEAHITACA*KVRQKD
Trigger: GTCTTTTTGTCTCACTTTGCAAGCACAGGCTGTGAT...GTGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp TTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGAAATTACACAATGTCTaGTCTCAGGCCACAGTGGAA +
Preference number: 4 (lower is better)
Translates to: FWVIVYGQFLEFLMMSPVKLHNV*SQATVE
Trigger: TTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTT...CACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCTTGAACCAGCTCAATaGCACCAAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPLEPAQ*HQRASP
Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCACCTCCAGAGTTGCTGTaGAGACCATTTTCCTCTGAC +
Preference number: 4 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPPPELL*RPFSSD
Trigger: GTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGG...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACTGTGTCCAAGTCCATaGAAGCTCACATTAGCATCA +
Preference number: 4 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSLCPSP*KLTLAS
Trigger: TGATGCTAATGTGAGCTTCCATGGACTTGGACACAG...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAATTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp ATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: ILGHCVWAVSRVPDDVPCGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...ACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGACAGATCAGACACAGTaGGTGACGGGAACATGTCAG +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGTDQTQ*VTGTCQ
Trigger: CTGACATGTTCCCGTCACTCACTGTGTCTGATCTGT...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGAATTCTGACTGGGCTTaGGCTGAGAGTCATAAAGAT +
Preference number: 4 (lower is better)
Translates to: NSKYASVELIELEAAEVQNSDWA*AESHKD
Trigger: ATCTTTATGACTCTCAGCTCAAGCCCAGTCAGAATT...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp ACACAGGGAGAAAAGTGTGTTAGCGTCTGGCACAGAACAGGGCGAAGAAGAGGCATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: TQGEKCVSVWHRTGRRRGMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...GCCTCTTCTTCGCCCTGTTCTGTGCCAGACGCTAACACACTTTTCTCCCTGTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TTGCATATAAAGGAGAGCTGGCTGTATGGAATCCAGCACAAGACCAGGAGTCAACAATATCTCTACCCTTaGCAAGCTATTTGCATCCGC +
Preference number: 4 (lower is better)
Translates to: LHIKESWLYGIQHKTRSQQYLYP*QAICIR
Trigger: GCGGATGCAAATAGCTTGGCAAGGGTAGAGATATTG...TTGACTCCTGGTCTTGTGCTGGATTCCATACAGCCAGCTCTCCTTTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CGGGACTTCTGCTATGGGGCATTCGCAAGAGCCACTGACTCAGCTTTGAATAAAACCCTGTGTCTTCCATaGAAAATAAATGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: RDFCYGAFARATDSALNKTLCLP*KINGAC
Trigger: ACATGCTCCATTTATTTTCCATGGAAGACACAGGGT...TTTATTCAAAGCTGAGTCAGTGGCTCTTGCGAATGCCCCATAGCAGAAGTCCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp TTGCATATAAAGGAGAGCTGGCTGTATGGAATCCAGCACAAGACCAGGAGTCAATTCCATTCTCCGTCTTaGAATGAACCCAGGAAAGTG +
Preference number: 4 (lower is better)
Translates to: LHIKESWLYGIQHKTRSQFHSPS*NEPRKV
Trigger: CACTTTCCTGGGTTCATTCCAAGACGGAGAATGGAA...TTGACTCCTGGTCTTGTGCTGGATTCCATACAGCCAGCTCTCCTTTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCTGGGTCATTGTGTATaGGCAGTTTCTCGAGTTCCT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPLGHCV*AVSRVP
Trigger: AGGAACTCGAGAAACTGCCCATACACAATGACCCAG...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCCGTCGAGAGAAACGTaGGCAGCACCACCTTCTCCA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTPSRET*AAPPSP
Trigger: TGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTTTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATTGGGAAATAAAAAGTaGACAAGGAGGCCATTATGT +
Preference number: 4 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRLGNKK*TRRPLC
Trigger: ACATAATGGCCTCCTTGTTCACTTTTTATTTCCCAA...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp TGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: CVWAVSRVPDDVPCAERCMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...ACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp GTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTAATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: VYGQFLEFLMMSPVQNGVMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...TACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTSAMLV*RLRPAL
Trigger: GAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCTGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGAAGAGCAACAGCAAATaGTTCCAGAAATGTGGCAAT +
Preference number: 4 (lower is better)
Translates to: NSKYASVELIELEAAEVQKSNSK*FQKCGN
Trigger: ATTGCCACATTTCTGGAACCATTTGCTGTTGCTCTT...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp AGCAATTTTAGTATGGGGCCCACTTTGATCAAGCATGACATGGAAGGCATACTCGACTTTCTTGCCCACTaGCTTCAGGTTATGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SNFSMGPTLIKHDMEGILDFLAH*LQVMFS
Trigger: GGAAAACATAACCTGAAGCCAGTGGGCAAGAAAGTC...GAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR CAA 72 bp CACCACACTCCACTGCATCCCTCTTCCCCAGAAATGTaGACTAATGAACATTCAGTTCTTCCAGTTACTGAT +
Preference number: 4 (lower is better)
Translates to: HHTPLHPSSPEM*TNEHSVLPVTD
Trigger: ATCAGTAACTGGAAGAACTGAATGTTCATTAGTCAACATTTCTGGGGAAGAGGGATGCAGTGGAGTGTGGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTCTGTCCTCATGCGATaGGTGCTATGCTGGTCTGCC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTSVLMR*VLCWSA
Trigger: GGCAGACCAGCATAGCACTCATCGCATGAGGACAGA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR TCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCTGCTTAGAACGTGAGTaGGACAGATCAGACACAGTG +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCCLERE*DRSDTV
Trigger: CACTGTGTCTGATCTGTCTCACTCACGTTCTAAGCA...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCATCATGGGAAAGATCCTaGAGCCTAATAAACACCTAC +
Preference number: 4 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPSWERS*SLINTY
Trigger: GTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGA...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGTTCTCACTTCACAGGTaGAATGATGTGGATTTTCAT +
Preference number: 4 (lower is better)
Translates to: NSKYASVELIELEAAEVQFSLHR*NDVDFH
Trigger: ATGAAAATCCACATCATTTCACCTGTGAAGTGAGAA...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCATTAGGTCTGAGAATTTaGAATGCTACAATGCTTGCT +
Preference number: 4 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSLGLRI*NATMLA
Trigger: AGCAAGCATTGTAGCATTTCAAATTCTCAGACCTAA...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AGCAATTTTAGTATGGGGCCCACTTTGATCAAGCATGACATGGAAGGCATACTCTTCAATCACGTTTCTTaGATCTCATCACAGCCTGTG +
Preference number: 4 (lower is better)
Translates to: SNFSMGPTLIKHDMEGILFNHVS*ISSQPV
Trigger: CACAGGCTGTGATGAGATTCAAGAAACGTGATTGAA...GAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR GCA 90 bp TTGCATATAAAGGAGAGCTGGCTGTATGGAATCCAGCACAAGACCAGGAGTCAAACAGACCCAGAACGATaGAGGTCAATAATAATTCTG +
Preference number: 4 (lower is better)
Translates to: LHIKESWLYGIQHKTRSQTDPER*RSIIIL
Trigger: CAGAATTATTATTGACCTGCATCGTTCTGGGTCTGT...TTGACTCCTGGTCTTGTGCTGGATTCCATACAGCCAGCTCTCCTTTATATGCAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTQSGPE*KVFGSA
Trigger: AGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCTTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTKSMPL*AGRPEM
Trigger: CATCTCTGGACGTCCTGCTCACAACGGCATCGATTT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp TGTAAAAGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGA +
Preference number: 4 (lower is better)
Translates to: CKRIEITQCLLSGHSGIKGSTRN*YSRARG
Trigger: TCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACC...TTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCTTTTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR TCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGAGTGGGGTCCAGAGATaGAAGAACACTATTCAAGAT +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGSGVQR*KNTIQD
Trigger: ATCTTGAATAGTGTTCTTTCATCTCTGGACCCCACT...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGAATTTGGGCGATGAGGTaGGAAAGAGGAGTATATTTC +
Preference number: 4 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRIWAMR*ERGVYF
Trigger: GAAATATACTCCTCTTTCTCACCTCATCGCCCAAAT...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp ACAGAGGTAATTCTGACTGGGCTTGAGCTGAGAGTCATAAAGATCTTGCAATTTTTACAGGAATCCAAGTaGCCCTTCCATCTAGACCAT +
Preference number: 4 (lower is better)
Translates to: TEVILTGLELRVIKILQFLQESK*PFHLDH
Trigger: ATGGTCTAGATGGAAGGGTCACTTGGATTCCTGTAA...AAATTGCAAGATCTTTATGACTCTCAGCTCAAGCCCAGTCAGAATTACCTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTSSCDE*YAGLPT
Trigger: AGTCGGCAGACCAGCATAGCACTCATCGCATGAGGA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGGTGACAAAGAATGGTaGCCAGCAGAGGCAGAAGCA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTGDKEW*PAEAEA
Trigger: TGCTTCTGCCTCTGCTGGGCACCATTCTTTGTCACC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp ATTGAGACTCAGATGCTTATATTAATGCCGTCACATCTGCACCCTCAGGTTTCTTCTCATCACAGCCTGTaGTTGCAAAGTGAGACAAAA +
Preference number: 4 (lower is better)
Translates to: IETQMLILMPSHLHPQVSSHHSL*LQSETK
Trigger: TTTTGTCTCACTTTGCAAGCACAGGCTGTGATGAGA...AGAAACCTGAGGGTGCAGATGTGACGGCATTAATATAAGCATCTGAGTCTCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGGGTCTTGGCTGCTTTaGTCTCTGTCCTCATGCGAT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTGSWLL*SLSSCD
Trigger: ATCGCATGAGGACAGAGACCAAAGCAGCCAAGACCC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR CCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCTCTGAAGGACAAAGCTaGAAAGGTCAGGGGTCTAAA +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCSEGQS*KGQGSK
Trigger: TTTAGACCCCTGACCTTTCCAGCTTTGTCCTTCAGA...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTATGAATGCGAATGAATaGCTAAGTTGTGAGCCATGT +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPMNANE*LSCEPC
Trigger: ACATGGCTCACAACTTAGCCATTCATTCGCATTCAT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp ACAGAGGTAATTCTGACTGGGCTTGAGCTGAGAGTCATAAAGATCTTGCAATTTTGCAGAGGTTCAGCTTaGCAAGCAAAACAAAGTCAG +
Preference number: 4 (lower is better)
Translates to: TEVILTGLELRVIKILQFCRGSA*QAKQSQ
Trigger: CTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCA...AAATTGCAAGATCTTTATGACTCTCAGCTCAAGCCCAGTCAGAATTACCTCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
3UTR CAA 72 bp ACTTCTATCTCAAGCAATTTTAGTATGGGGCCCACTTaGATCAAGCATGACATGGAAGGCATACTCTTCTCA +
Preference number: 4 (lower is better)
Translates to: TSISSNFSMGPT*IKHDMEGILFS
Trigger: TGAGAAGAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCTTGAGATAGAAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp AGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGTAGAATGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: RIEITQCLLSGHSGIKVECNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...TTCTACTTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR TCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCTCATGGGAAAGATCCTaGAGCCTAATAAACACCTAC +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCSWERS*SLINTY
Trigger: GTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGA...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTTTATTTTCCTGAGCTaGCTGTCCCAGCACACAGCC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTFIFLS*LSQHTA
Trigger: GGCTGTGTGCTGGGACAGGCAGCTCAGGAAAATAAA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTQVKNR*RCEQDV
Trigger: GACGTCCTGCTCACAACGGCATCGATTTTTCACCTG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCCAGCATTAATGCGATaGGCAGAGGGGTCATCTTGT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTPALMR*AEGSSC
Trigger: ACAAGATGACCCCTCTGCGCATCGCATTAATGCTGG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp ATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGTAGAAATATGGTCTCTGTCCTCATaGGATGAGTGCTATGCTGGT +
Preference number: 4 (lower is better)
Translates to: IEITQCLLSGHSGIKVEIWSLSS*DECYAG
Trigger: ACCAGCATAGCACTCATCGCATGAGGACAGAGACCA...TATTTCTACTTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCTTGAACCAGCTCAATaGCACCAAAGGGCATCACCA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTLEPAQ*HQRASP
Trigger: TGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTAAGGCTGGCAGCAGATaGCGTAATACCTATCCAGAG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTKAGSR*RNTYPE
Trigger: CTCTGGATAGGTATTACGCCATCTGCTGCCAGCCTT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTCACCATGAGGAGAAATaGGATGTAGAAGGCCACCAC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTHHEEK*DVEGHH
Trigger: GTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTG...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR CCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGAACAAGGGACAGTCTaGCCCAGAATGGAAGGTCTT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTEQGTV*PRMEGL
Trigger: AAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR CCA 90 bp ACTAAAATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTTGGTCTAATTCACCCTaGATGATCATGGAAGAGAGG +
Preference number: 4 (lower is better)
Translates to: TKIHHNTTLCVFQGTRLGWSNSP*MIMEER
Trigger: CCTCTCTTCCATGATCATCCAGGGTGAATTAGACCA...ACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAATTTTAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp ATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGTAGAAATAGAAATGCAGCACAGGTaGAAAATCGATGCCGTTGTG +
Preference number: 4 (lower is better)
Translates to: IEITQCLLSGHSGIKVEIEMQHR*KIDAVV
Trigger: CACAACGGCATCGATTTTTCACCTGTGCTGCATTTC...TATTTCTACTTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp TGTAAAAGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAAATAGGCCAGCACCATaGGGAGAAATGGGATGTAGA +
Preference number: 4 (lower is better)
Translates to: CKRIEITQCLLSGHSGIKNRPAP*GEMGCR
Trigger: TCTACATCCCATTTCTCCTCATGGTGCTGGCCTATT...TTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCTTTTACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTGTAACATCTGGATCTaGTGGGCATGCTCCTTAGCT +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTCNIWI*WACSLA
Trigger: AGCTAAGGAGCATGCCCATCAGATCCAGATGTTACA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp TGTAAAAGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGATCCACAATATTGGTaGCAAAGAATGGTGCCCAGC +
Preference number: 4 (lower is better)
Translates to: CKRIEITQCLLSGHSGIKDPQYW*QRMVPS
Trigger: GCTGGGCACCATTCTTTGTCACCAATATTGTGGATC...TTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCTTTTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTATTAATGGTTGTGGTTaGACAAGGGACAGTCTGGCC +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTINGCG*TRDSLA
Trigger: GGCCAGACTGTCCCTTGTTCAACCACAACCATTAAT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR GCA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: PVHANMNANEWLSCEPCPMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CCA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCGGCATTTGGATGGTTTaGTCAATCTTCTCTTCCTTA +
Preference number: 4 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCGIWMV*SIFSSL
Trigger: TAAGGAAGAGAAGATTGACCAAACCATCCAAATGCC...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTTTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp TGTAAAAGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAATTGTTTTTATTTTCCTaGGCTGCCTGTCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: CKRIEITQCLLSGHSGIKLFLFS*AACPST
Trigger: TGTGCTGGGACAGGCAGCTCAGGAAAATAAAAACAA...TTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCTTTTACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR CCA 90 bp GGCAGCAACAAAGCCAGATTGAAGGGTTTCAAAATGATATCACAAGTTCATGGGTTTTTGGCATTTGGATaGTTTGGTCAATCTTCTCTT +
Preference number: 4 (lower is better)
Translates to: GSNKARLKGFKMISQVHGFLAFG*FGQSSL
Trigger: AAGAGAAGATTGACCAAACCATCCAAATGCCAAAAA...CCCATGAACTTGTGATATCATTTTGAAACCCTTCAATCTGGCTTTGTTGCTGCC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR CCA 90 bp ATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGTAGAAATAGAGTTAGACAGGAACTaGTCTATTGCAGAAGAGCAG +
Preference number: 4 (lower is better)
Translates to: IEITQCLLSGHSGIKVEIELDRN*SIAEEQ
Trigger: CTGCTCTTCTGCAATAGACCAGTTCCTGTCTAACTC...TATTTCTACTTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR TCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGGACAGTGTAGTCTATaGAAGGATCCACAATATTGG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTGQCSL*KDPQYW
Trigger: CCAATATTGTGGATCCTTTCATAGACTACACTGTCC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR TCA 90 bp CTGTATCTGTTATTTGCCACAGTTTTTATGCACTTATATCAATCAATGAGAGCCCACTTTGATCAAGCATaGCATGGAAGGCATACTCTT +
Preference number: 4 (lower is better)
Translates to: LYLLFATVFMHLYQSMRAHFDQA*HGRHTL
Trigger: AAGAGTATGCCTTCCATGTCATGCTTGATCAAAGTG...GGCTCTCATTGATTGATATAAGTGCATAAAAACTGTGGCAAATAACAGATACAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTACCTATCCAGAGAAATaGAGCACAGGTGAAAAATCG +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTTYPEK*STGEKS
Trigger: CGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000517929.5
3UTR CAA 72 bp GAAATTGTAAATAATTCACAGCTTCAATCACGTTTCTaGAATCTCATCACAGCCTGTGCTTGCAAAGTGAGA +
Preference number: 4 (lower is better)
Translates to: EIVNNSQLQSRF*NLITACACKVR
Trigger: TCTCACTTTGCAAGCACAGGCTGTGATGAGATTCAAGAAACGTGATTGAAGCTGTGAATTATTTACAATTTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CCA 90 bp ACTAAAATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTACAGGTGAAATGATGTaGATTTTCATTATCAAGGAG +
Preference number: 4 (lower is better)
Translates to: TKIHHNTTLCVFQGTRLGTGEMM*IFIIKE
Trigger: CTCCTTGATAATGAAAATCCACATCATTTCACCTGT...ACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAATTTTAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR GCA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTATGTTATTCCAGCCTTaGATTATAGGGAGAAAAGAA +
Preference number: 4 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTMLFQP*IIGRKE
Trigger: TTCTTTTCTCCCTATAATGCAAGGCTGGAATAACAT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS GCA 90 bp GAGCCGAGCTTCTGCTGCCGCCGCTGCCGCTGCGCTCCCAGCCGCTaGCTGCGCCCTCCCTGCCGCCCCCTCGGGTGCGGGCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: EPSFCCRRCRCAPSR*LRPPCRPLGCGLQP
Trigger: GGGCTGGAGCCCGCACCCGAGGGGGCGGCAGGGAGGGCGCAGGCAGCGGCTGGGAGCGCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTC
80% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS GCA 90 bp CCACCCCCAGCCGCTGAGCCGAGCTTCTGCTGCCGCCGCTGCCGCTaGGCTCCCAGCCGCTGCCTGCGCCCTCCCTGCCGCCCCCTCGGG +
Preference number: 5 (lower is better)
Translates to: PPPAAEPSFCCRRCR*APSRCLRPPCRPLG
Trigger: CCCGAGGGGGCGGCAGGGAGGGCGCAGGCAGCGGCTGGGAGCGCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTCAGCGGCTGGGGGTGG
80% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS CCA 90 bp CGCTCTGCCGGCAGGGCGCACAGGGGAGTGGGCACAGAGGCGGGCTaGAGCGATCTCACCCGTTCCGGGCTGGCCAGCACGCGCCCTCCC +
Preference number: 5 (lower is better)
Translates to: RSAGRAHRGVGTEAG*SDLTRSGLASTRPP
Trigger: GGGAGGGCGCGTGCTGGCCAGCCCGGAACGGGTGAGATCGCTCCAGCCCGCCTCTGTGCCCACTCCCCTGTGCGCCCTGCCGGCAGAGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS CCA 90 bp AGGGACAGCGGGGGTGCCGCTCTGCCGGCAGGGCGCACAGGGGAGTaGGCACAGAGGCGGGCTGGAGCGATCTCACCCGTTCCGGGCTGG +
Preference number: 5 (lower is better)
Translates to: RDSGGAALPAGRTGE*AQRRAGAISPVPGW
Trigger: CCAGCCCGGAACGGGTGAGATCGCTCCAGCCCGCCTCTGTGCCCACTCCCCTGTGCGCCCTGCCGGCAGAGCGGCACCCCCGCTGTCCCT
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS GCA 90 bp TTTCAATGCCCACAGGGTCCCGCTGCCAGAGGCGAGGGAGCGAGGTaGCCTGGCAGATTCGAGCGGCCACCCCCAGCCGCTGAGCCGAGC +
Preference number: 5 (lower is better)
Translates to: FQCPQGPAARGEGAR*PGRFERPPPAAEPS
Trigger: GCTCGGCTCAGCGGCTGGGGGTGGCCGCTCGAATCTGCCAGGGCACCTCGCTCCCTCGCCTCTGGCAGCGGGACCCTGTGGGCATTGAAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGCTGCCCTCCTGCACCTaGGGGGAGCTGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSELPSCT*GELQGK
Trigger: TTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCAG...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCGAGGCAGGGGATAGCTaGAACATGGCTGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGEAGDS*NMAVTD
Trigger: GTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTC...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCTGCCCTCCTGCACCTaGGGGGAGCTGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFLPSCT*GELQGK
Trigger: TTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCAG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCTGCCCTCCTGCACCTaGGGGGAGCTGCAGGGGAAA +
Preference number: 5 (lower is better)
Translates to: GRLGLTRGPTKRMHVWTQLPSCT*GELQGK
Trigger: TTTCCCCTGCAGCTCCCCCAAGGTGCAGGAGGGCAG...CTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCGCTTCAAGTACAGCATaGCCTCGGCATCCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGASSTA*PRHPQC
Trigger: GCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGC...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGCCACCAAAGGAGAAGTaGCTGGCGGGTGACACTGAC +
Preference number: 5 (lower is better)
Translates to: YRVQSRTSSSLGPGPLSEPPKEK*LAGDTD
Trigger: GTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGG...CTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGACTGTCTTCTGGGTCATaGTCCCAGGGGCCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: PSEHRVPALADGKPQVKRLSSGS*SQGPKC
Trigger: ACACTTAGGCCCCTGGGACAATGACCCAGAAGACAG...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCGAGGCAGGGGATAGCTaGAACATGGCTGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: SQRKSPASTGFLHWRTESEAGDS*NMAVTD
Trigger: GTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTC...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCGCTTCAAGTACAGCATaGCCTCGGCATCCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: SQRKSPASTGFLHWRTESASSTA*PRHPQC
Trigger: GCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGC...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGATCTCACAGCTTGTTaGCAGCACAGCCAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: HRVPALADGKPQVKRIPGDLTAC*QHSQGG
Trigger: GCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGATC...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCCACCAAAGGAGAAGTaGCTGGCGGGTGACACTGAC +
Preference number: 5 (lower is better)
Translates to: HLLESQRKSPASTGFLHWPPKEK*LAGDTD
Trigger: GTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp GCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCCCACCAAAGGAGAAGTaGCTGGCGGGTGACACTGAC +
Preference number: 5 (lower is better)
Translates to: AHKQQLRTWPSFGGMAVFPPKEK*LAGDTD
Trigger: GTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGG...GAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAACAAGAGGATGCACGTTaGGACCCAGACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEQEDAR*DPDTGR
Trigger: TCTCCCTGTGTCTGGGTCCAAACGTGCATCCTCTTG...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGATCTCACAGCTTGTTaGCAGCACAGCCAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: WTSGTDKGANQEDARLDPDLTAC*QHSQGG
Trigger: GCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGATC...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCTGTCTTCTGGGTCATaGTCCCAGGGGCCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: HLLESQRKSPASTGFLHWLSSGS*SQGPKC
Trigger: ACACTTAGGCCCCTGGGACAATGACCCAGAAGACAG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGGAGGCAGGGGATAGCTaGAACATGGCTGTGACGGAC +
Preference number: 5 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWEAGDS*NMAVTD
Trigger: GTCCGTCACAGCCATGTTCAAGCTATCCCCTGCCTC...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAGCTTCCCTCCAGAGTaGCTGTGGAGACCATTTTCC +
Preference number: 5 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHSFPPE*LWRPFS
Trigger: GGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCT...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGCTTCAAGTACAGCATaGCCTCGGCATCCCCAGTGC +
Preference number: 5 (lower is better)
Translates to: WTSGTDKGANQEDARLDPASSTA*PRHPQC
Trigger: GCACTGGGGATGCCGAGGCAATGCTGTACTTGAAGC...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCTCCTCTAGTCCAAGCTaGAGTGCACAGATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: PGAVAHKQQLRTWPSFGGSSSPS*SAQMWK
Trigger: TTTCCACATCTGTGCACTCAAGCTTGGACTAGAGGA...GCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS GCA 90 bp CTGTCCTCATGCGATGAGTGCTATGCTGGTCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTGCCCGTTGTAACATCTGGATCTGAT +
Preference number: 5 (lower is better)
Translates to: LSSCDECYAGLPTEA*SRRRLLPVVTSGSD
Trigger: ATCAGATCCAGATGTTACAACGGGCAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACTCATCGCATGAGGACAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS-3UTR CAA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGCTGTCTTCTGGGTCATaGTCCCAGGGGCCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWLSSGS*SQGPKC
Trigger: ACACTTAGGCCCCTGGGACAATGACCCAGAAGACAG...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCACAAGAGGATGCACGTTaGGACCCAGACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSQEDAR*DPDTGR
Trigger: TCTCCCTGTGTCTGGGTCCAAACGTGCATCCTCTTG...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCAGCTTCCCTCCAGAGTaGCTGTGGAGACCATTTTCC +
Preference number: 5 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFSFPPE*LWRPFS
Trigger: GGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCT...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTAGCTTCCCTCCAGAGTaGCTGTGGAGACCATTTTCC +
Preference number: 5 (lower is better)
Translates to: HRVPALADGKPQVKRIPGSFPPE*LWRPFS
Trigger: GGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCT...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTCCTCTAGTCCAAGCTaGAGTGCACAGATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: APGSCTGGRKASGEENTGSSSPS*SAQMWK
Trigger: TTTCCACATCTGTGCACTCAAGCTTGGACTAGAGGA...CCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS CCA 90 bp AACATCCACGCTGCTGGTCTCAGGAGGACCTGGTCTAATTCACCCTaGATGATCATGGAAGAGAGGTCTCTCCAGGCACGACAGCTGGAC +
Preference number: 5 (lower is better)
Translates to: NIHAAGLRRTWSNSP*MIMEERSLQARQLD
Trigger: GTCCAGCTGTCGTGCCTGGAGAGACCTCTCTTCCATGATCATCCAGGGTGAATTAGACCAGGTCCTCCTGAGACCAGCAGCGTGGATGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS-3UTR CAA 90 bp ACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAGACCCGCTCTGGCAGGCTTaGTCCAATACCTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: TSGTDKGANQEDARLDPDPLWQA*SNTLLK
Trigger: TTTTAGCAAGGTATTGGACAAAGCCTGCCAGAGCGG...GTCTGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR CAA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCAGCAAAGAAGGCGTATTaGGAGACATCAGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSAKKAY*ETSVTE
Trigger: CTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGC...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACCAGAGAGGGAGTATTTaGTTGATATCTGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHQRGSI*LISGSP
Trigger: TGGGCTTCCAGATATCAACAAAATACTCCCTCTCTG...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCTCCTCTAGTCCAAGCTaGAGTGCACAGATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFSSSPS*SAQMWK
Trigger: TTTCCACATCTGTGCACTCAAGCTTGGACTAGAGGA...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTATAAGCATGAGTGAGTaGGATTTCAATGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: HRVPALADGKPQVKRIPGISMSE*DFNAHR
Trigger: CCTGTGGGCATTGAAATCCAACTCACTCATGCTTAT...ACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: PSEHRVPALADGKPQVKRELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp CCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAGCTTTGTCCAATACCTaGCTAAAATGTCTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: PSEHRVPALADGKPQVKRALSNT*LKCLCQ
Trigger: TTGACAGAGACATTTTAGCAAGGTATTGGACAAAGC...TCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR CAA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGCCACCAAAGGAGAAGTaGCTGGCGGGTGACACTGAC +
Preference number: 5 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTPPKEK*LAGDTD
Trigger: GTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGG...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGGCAAAGAAGGCGTATTaGGAGACATCAGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLAKKAY*ETSVTE
Trigger: CTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGC...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CACCTGCTGGAATCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCAGAGAGGGAGTATTTaGTTGATATCTGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: HLLESQRKSPASTGFLHWQRGSI*LISGSP
Trigger: TGGGCTTCCAGATATCAACAAAATACTCCCTCTCTG...CCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGATTCCAGCAGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCAAGAGGAGGACAGACATaGGACATAAGGAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSRGGQT*DIRKSK
Trigger: CTTGCTCTTCCTTATGTCCAATGTCTGTCCTCCTCT...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCAAGAGGAGGACAGACATaGGACATAAGGAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: WTSGTDKGANQEDARLDPRGGQT*DIRKSK
Trigger: CTTGCTCTTCCTTATGTCCAATGTCTGTCCTCCTCT...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS CCA 90 bp AGCTGTGACATAGATGCGGTAATAGGCCAGCACCATGAGGAGAAATaGGATGTAGAAGGCCACCACAGAGCAGGTGATGGCGTAGGGCTT +
Preference number: 5 (lower is better)
Translates to: SCDIDAVIGQHHEEK*DVEGHHRAGDGVGL
Trigger: AAGCCCTACGCCATCACCTGCTCTGTGGTGGCCTTCTACATCCCATTTCTCCTCATGGTGCTGGCCTATTACCGCATCTATGTCACAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS-3UTR CAA 90 bp CCAGGGCGGCAATTTGGGTCCTCTGGCTTCAAGTACAGCATTGCCTCGGCATCCATAAGCATGAGTGAGTaGGATTTCAATGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: PGRQFGSSGFKYSIASASISMSE*DFNAHR
Trigger: CCTGTGGGCATTGAAATCCAACTCACTCATGCTTAT...GGATGCCGAGGCAATGCTGTACTTGAAGCCAGAGGACCCAAATTGCCGCCCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGACTCTCCCACTATAAGCATGAGTGAGTaGGATTTCAATGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: AEQPPKEKLLAGDTDSPTISMSE*DFNAHR
Trigger: CCTGTGGGCATTGAAATCCAACTCACTCATGCTTAT...AGTGGGAGAGTCAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR CAA 90 bp AAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: KAQRAPGSCTGGRKASGEELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...TTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp GCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCGCGCACGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: ALADGKPQVKRIPGAVAHELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...GTGCGCGACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp GAGACATCAGTGACCGAGATAGGACGCAGCAAGCTATCGTGCTTAGAACGTGAGCTGTCTTCTGGGTCATaGTCCCAGGGGCCTAAGTGT +
Preference number: 5 (lower is better)
Translates to: ETSVTEIGRSKLSCLERELSSGS*SQGPKC
Trigger: ACACTTAGGCCCCTGGGACAATGACCCAGAAGACAG...CTCACGTTCTAAGCACGATAGCTTGCTGCGTCCTATCTCGGTCACTGATGTCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGCAGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCAAGAGGGAGTATTTTGTaGATATCTGGAAGCCCACAC +
Preference number: 5 (lower is better)
Translates to: SSSLGPGPLSEAWLSSGSRGSIL*ISGSPH
Trigger: GTGTGGGCTTCCAGATATCAACAAAATACTCCCTCT...TGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATACCGGGTGCAGTCCAACAGTTATCTCCTTaGGCAGCAACAAAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: VPALADGKPQVKRIPGAVQQLSP*AATKPD
Trigger: ATCTGGCTTTGTTGCTGCCAAAGGAGATAACTGTTG...GACTGCACCCGGTATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TGGACGTCTGGGACTGACAAGGGGGCCAACCAAGAGGATGCACGTTTGGACCCACAACAGTTATCTCCTTaGGCAGCAACAAAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: WTSGTDKGANQEDARLDPQQLSP*AATKPD
Trigger: ATCTGGCTTTGTTGCTGCCAAAGGAGATAACTGTTG...TGGGTCCAAACGTGCATCCTCTTGGTTGGCCCCCTTGTCAGTCCCAGACGTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp TCTCAGGGCAGACACGCCAGCGGCCAGGACACCAGGAGGAAGCTATCTGTCTTCTGGCATTTGGATGGTTaGGTCAATCTTCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: SQGRHASGQDTRRKLSVFWHLDG*VNLLFL
Trigger: AAGGAAGAGAAGATTGACCAAACCATCCAAATGCCA...GAAGACAGATAGCTTCCTCCTGGTGTCCTGGCCGCTGGCGTGTCTGCCCTGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR CAA 90 bp TCTCAGAGGAAAAGCCCAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCTATAACCTCAATCCTTaGTTTCTTACCTCTCTCCCT +
Preference number: 5 (lower is better)
Translates to: SQRKSPASTGFLHWRTESYNLNP*FLTSLP
Trigger: AGGGAGAGAGGTAAGAAACAAAGGATTGAGGTTATA...GCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTGGGCTTTTCCTCTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS-3UTR CAA 90 bp CAGCGAGCACCGGGTTCCTGCACTGGCGGACGGAAAGCCTCAGGTGAAGAGAATGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: QRAPGSCTGGRKASGEENELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...ATTCTCTTCACCTGAGGCTTTCCGTCCGCCAGTGCAGGAACCCGGTGCTCGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp AGCAGCTTAGGACCTGGCCCTCTTTCGGAGGCATGGCTGTCTTCTGGGTCATTGCAACAGTTATCTCCTTaGGCAGCAACAAAGCCAGAT +
Preference number: 5 (lower is better)
Translates to: SSLGPGPLSEAWLSSGSLQQLSP*AATKPD
Trigger: ATCTGGCTTTGTTGCTGCCAAAGGAGATAACTGTTG...CAATGACCCAGAAGACAGCCATGCCTCCGAAAGAGGGCCAGGTCCTAAGCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAAGATCTCACAGCTTGTTaGCAGCACAGCCAGGGCGGC +
Preference number: 5 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKDLTAC*QHSQGG
Trigger: GCCGCCCTGGCTGTGCTGCAAACAAGCTGTGAGATC...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CAGGTGAAGAGAATACCGGGTGCAGTCGCGCACAAGCAGCAGCTTAGGACCTGGTGGCATTTGGATGGTTaGGTCAATCTTCTCTTCCTT +
Preference number: 5 (lower is better)
Translates to: QVKRIPGAVAHKQQLRTWWHLDG*VNLLFL
Trigger: AAGGAAGAGAAGATTGACCAAACCATCCAAATGCCA...CCAGGTCCTAAGCTGCTGCTTGTGCGCGACTGCACCCGGTATTCTCTTCACCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000377888.8
CDS-3UTR CAA 90 bp AATTCAAAGTATGCCTCAGTGGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGGTCCAGGGGGAAGCTTaGAGGCCTACAGACTGCTCA +
Preference number: 5 (lower is better)
Translates to: NSKYASVELIELEAAEVQVQGEA*RPTDCS
Trigger: TGAGCAGTCTGTAGGCCTCAAAGCTTCCCCCTGGAC...CTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCCACTGAGGCATACTTTGAATT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS TCA 90 bp CAGGATAACCGTCGAGAGAAACGTGAGCAGCACCACCTTCTCCACTaGCCCGAAACCCTCCTCAGAACTCACATTAGCATCAAGTTTGTC +
Preference number: 5 (lower is better)
Translates to: QDNRREKREQHHLLH*PETLLRTHISIKFV
Trigger: GACAAACTTGATGCTAATGTGAGTTCTGAGGAGGGTTTCGGGTCAGTGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACGGTTATCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000519495.1
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS TCA 90 bp GCTCTGGTTTCTTCCATTCTCCGTCTTGGAATGAACCCAGGAAAGTaGAGTAGGGAAAACGGAGAAGCATGTGAGAGGCGTACGAGGTGG +
Preference number: 5 (lower is better)
Translates to: ALVSSILRLGMNPGK*SRENGEACERRTRW
Trigger: CCACCTCGTACGCCTCTCACATGCTTCTCCGTTTTCCCTACTTCACTTTCCTGGGTTCATTCCAAGACGGAGAATGGAAGAAACCAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS CCA 90 bp GACAAAACACCTCCCCATAAATCCAGATGTCTTGAACCAGCTCAATaGCACCAAAGGGCATCACCAGCACCGAAACCAGCAGATCCGCAA +
Preference number: 5 (lower is better)
Translates to: DKTPPHKSRCLEPAQ*HQRASPAPKPADPQ
Trigger: TTGCGGATCTGCTGGTTTCGGTGCTGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAGACATCTGGATTTATGGGGAGGTGTTTTGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS-3UTR CAA 90 bp AAAGTGAACAAGGAGGCCATTATGTCCCCTGACTCCCTCCAGCGCCACCTGCTGAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: KVNKEAIMSPDSLQRHLLKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...CAGCAGGTGGCGCTGGAGGGAGTCAGGGGACATAATGGCCTCCTTGTTCACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp GTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTAAGGGATTCTGGGTCATaGTGTATGGGCAGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: VYGQFLEFLMMSPVQNGVRDSGS*CMGSFS
Trigger: CGAGAAACTGCCCATACACAATGACCCAGAATCCCT...TACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS TCA 90 bp ACCTATCCAGAGAAATGCAGCACAGGTGAAAAATCGATGCCGTTGTaGGCAGGACGTCCAGAGATGTCCGAACAAGACAAAACACCTCCC +
Preference number: 5 (lower is better)
Translates to: TYPEKCSTGEKSMPL*AGRPEMSEQDKTPP
Trigger: GGGAGGTGTTTTGTCTTGTTCGGACATCTCTGGACGTCCTGCTCACAACGGCATCGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS TCA 90 bp AAGACTTATTCAAGAAGGCGTAGAGAAAAGGGTTCAACCCGGAATTaGTATAGCCGAGCCAGAGGAAAGCAGTCCACACCTGCCCAGGGA +
Preference number: 5 (lower is better)
Translates to: KTYSRRRREKGSTRN*YSRARGKQSTPAQG
Trigger: TCCCTGGGCAGGTGTGGACTGCTTTCCTCTGGCTCGGCTATATCAATTCCGGGTTGAACCCTTTTCTCTACGCCTTCTTGAATAAGTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS CCA 90 bp TCCTTTTGGATATACAACATCCACGCTGCTGGTCTCAGGAGGACCTaGTCTAATTCACCCTGGATGATCATGGAAGAGAGGTCTCTCCAG +
Preference number: 5 (lower is better)
Translates to: SFWIYNIHAAGLRRT*SNSPWMIMEERSLQ
Trigger: CTGGAGAGACCTCTCTTCCATGATCATCCAGGGTGAATTAGACCAGGTCCTCCTGAGACCAGCAGCGTGGATGTTGTATATCCAAAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS-3UTR CAA 90 bp TCTGTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGAGCAAAGAAGGCGTATTaGGAGACATCAGTGACCGAG +
Preference number: 5 (lower is better)
Translates to: SVFSFPPELLWRPFSSDRAKKAY*ETSVTE
Trigger: CTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGC...TCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGACAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGGGGTCTAAAAGGCCCAAATGAGGAGGGTCGTTCCTTTGAAACAAAGCCAAAACAAGAGGATGCACGTTaGGACCCAGACACAGGGAGA +
Preference number: 5 (lower is better)
Translates to: RGLKGPNEEGRSFETKPKQEDAR*DPDTGR
Trigger: TCTCCCTGTGTCTGGGTCCAAACGTGCATCCTCTTG...TTTTGGCTTTGTTTCAAAGGAACGACCCTCCTCATTTGGGCCTTTTAGACCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTCCCTTGCCAAGCTATTaGCATCCGCTGATTTGCACA +
Preference number: 5 (lower is better)
Translates to: GTDRAGGCRGSAWQAKQSPLPSY*HPLICT
Trigger: TGTGCAAATCAGCGGATGCAAATAGCTTGGCAAGGG...ACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp AGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTCAGGACACTGCAATATCTCTACCCTaGCCAAGCTATTTGCATCCG +
Preference number: 5 (lower is better)
Translates to: RAGGCRGSAWQAKQSQDTAISLP*PSYLHP
Trigger: CGGATGCAAATAGCTTGGCAAGGGTAGAGATATTGC...AGTGTCCTGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp AGTGTCACTGGGCTGAGCAGCCACCAAAGGAGAAGTTGCTGGCGGGTGACACTGTCTTCCCCAGAAATGTaGACTAATGAACATTCAGTT +
Preference number: 5 (lower is better)
Translates to: SVTGLSSHQRRSCWRVTLSSPEM*TNEHSV
Trigger: AACTGAATGTTCATTAGTCAACATTTCTGGGGAAGA...CAGTGTCACCCGCCAGCAACTTCTCCTTTGGTGGCTGCTCAGCCCAGTGACACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000524063.3
CDS TCA 90 bp CTCACATTAGCATCAAGTTTGTCCATTACAGGAAATAAGCATGAGTaGGTTGGATTTCAATGCCCACAGGGTCCCGCTGCCAGAGGCGAG +
Preference number: 5 (lower is better)
Translates to: LTLASSLSITGNKHE*VGFQCPQGPAARGE
Trigger: CTCGCCTCTGGCAGCGGGACCCTGTGGGCATTGAAATCCAACTCACTCATGCTTATTTCCTGTAATGGACAAACTTGATGCTAATGTGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS-3UTR CAA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGAGAGGGAGTATTTTGTaGATATCTGGAAGCCCACAC +
Preference number: 5 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTRGSIL*ISGSPH
Trigger: GTGTGGGCTTCCAGATATCAACAAAATACTCCCTCT...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGCAGAGAGGGAGTATTTaGTTGATATCTGGAAGCCCA +
Preference number: 5 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTQRGSI*LISGSP
Trigger: TGGGCTTCCAGATATCAACAAAATACTCCCTCTCTG...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCAGGGATTCTGGGTCATaGTGTATGGGCAGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: KHDSRDSGSLCMGSFSSSRDSGS*CMGSFS
Trigger: CGAGAAACTGCCCATACACAATGACCCAGAATCCCT...GGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CAA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCAACAAAGTCAGGACACTaGGGAGCACCCCTTTCAGTA +
Preference number: 5 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSTKSGH*GAPLSV
Trigger: TACTGAAAGGGGTGCTCCCAAGTGTCCTGACTTTGT...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp GGAACTGATAGAGCTGGAGGCTGCAGAGGTTCAGCTTGGCAAGCAAAACAAAGTAGTATGGGGCCCACTTaGATCAAGCATGACATGGAA +
Preference number: 5 (lower is better)
Translates to: GTDRAGGCRGSAWQAKQSSMGPT*IKHDME
Trigger: TTCCATGTCATGCTTGATCAAAGTGGGCCCCATACT...ACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAGCCTCCAGCTCTATCAGTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp ATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTACAGGAACTGGTCTATaGCAGAAGAGCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: ILGHCVWAVSRVPDDVPCTGTGL*QKSRRK
Trigger: CTTCCTCCTGCTCTTCTGCAATAGACCAGTTCCTGT...ACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS TCA 90 bp GCGAATGAATGGCTAAGTTGTGAGCCATGTCCTCAATCAGAAGCATaGTTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAG +
Preference number: 5 (lower is better)
Translates to: ANEWLSCEPCPQSEA*FQGFWVIVYGQFLE
Trigger: CTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTGATTGAGGACATGGCTCACAACTTAGCCATTCATTCGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS GCA 90 bp GGCGTAATACCTATCCAGAGAAATGCAGCACAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTCCAGAGATGTCCGAACAAGACAAAA +
Preference number: 5 (lower is better)
Translates to: GVIPIQRNAAQVKNR*RCEQDVQRCPNKTK
Trigger: TTTTGTCTTGTTCGGACATCTCTGGACGTCCTGCTCACAACGGCATCGATTTTTCACCTGTGCTGCATTTCTCTGGATAGGTATTACGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS-3UTR CAA 90 bp GGGGATAGCTTGAACATGGCTGTGACGGACGTGACCAAGCAAGTAAGCAAGACAAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: GDSLNMAVTDVTKQVSKTKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...TGTCTTGCTTACTTGCTTGGTCACGTCCGTCACAGCCATGTTCAAGCTATCCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp GTGTATGGGCAGTTTCTCGAGTTCCTGATGATGTCCCCTGTGCAGAACGGTGTAAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: VYGQFLEFLMMSPVQNGVKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...TACACCGTTCTGCACAGGGGACATCATCAGGAACTCGAGAAACTGCCCATACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CAA 90 bp ATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCTGATGATACAGGAACTGGTCTATaGCAGAAGAGCAGGAGGAAG +
Preference number: 5 (lower is better)
Translates to: IPGILGHCVWAVSRVPDDTGTGL*QKSRRK
Trigger: CTTCCTCCTGCTCTTCTGCAATAGACCAGTTCCTGT...ATCATCAGGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CAA 90 bp GTCTTCAGCTTCCCTCCAGAGTTGCTGTGGAGACCATTTTCCTCTGACAGATCTAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: VFSFPPELLWRPFSSDRSKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...AGATCTGTCAGAGGAAAATGGTCTCCACAGCAACTCTGGAGGGAAGCTGAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGCCCACACAGCAAAGAAGGCGTATTTGGAGACATCAGTGACCGAGATAGGACGGCTTTGTCCAATACCTaGCTAAAATGTCTCTGTCAA +
Preference number: 5 (lower is better)
Translates to: SPHSKEGVFGDISDRDRTALSNT*LKCLCQ
Trigger: TTGACAGAGACATTTTAGCAAGGTATTGGACAAAGC...CGTCCTATCTCGGTCACTGATGTCTCCAAATACGCCTTCTTTGCTGTGTGGGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR CAA 90 bp ATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTCTGAGAGCCCACAGGGTCCTTTaGGATATACAACATCCACGC +
Preference number: 5 (lower is better)
Translates to: IHHNTTLCVFQGTRLGLRAHRVL*DIQHPR
Trigger: GCGTGGATGTTGTATATCCAAAAGGACCCTGTGGGC...TCTCAGACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTAGGGATTCTGGGTCATaGTGTATGGGCAGTTTCTCG +
Preference number: 5 (lower is better)
Translates to: PVHANMNANEWLSCEPCPRDSGS*CMGSFS
Trigger: CGAGAAACTGCCCATACACAATGACCCAGAATCCCT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CAA 90 bp ACAGAGGTAATTCTGACTGGGCTTGAGCTGAGAGTCATAAAGATCTTGCAATTTCCAGATACACCAGGGTaGACTGAGCAACAGACCCAG +
Preference number: 5 (lower is better)
Translates to: TEVILTGLELRVIKILQFPDTPG*TEQQTQ
Trigger: CTGGGTCTGTTGCTCAGTCAACCCTGGTGTATCTGG...AAATTGCAAGATCTTTATGACTCTCAGCTCAAGCCCAGTCAGAATTACCTCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp CAGAAATGTGGCAATGGTTGTGCCTCCAGCAGACCCATAACAGCAAGGAGGATCGGAGATAGTTTGTCTTaGGAGAGTTGGGAGATAATT +
Preference number: 5 (lower is better)
Translates to: QKCGNGCASSRPITARRIGDSLS*ESWEII
Trigger: AATTATCTCCCAACTCTCCAAAGACAAACTATCTCC...GATCCTCCTTGCTGTTATGGGTCTGCTGGAGGCACAACCATTGCCACATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp TTGCATATAAAGGAGAGCTGGCTGTATGGAATCCAGCACAAGACCAGGAGTCAAATAAGCATGAGTGAGTaGGATTTCAATGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: LHIKESWLYGIQHKTRSQISMSE*DFNAHR
Trigger: CCTGTGGGCATTGAAATCCAACTCACTCATGCTTAT...TTGACTCCTGGTCTTGTGCTGGATTCCATACAGCCAGCTCTCCTTTATATGCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp CCAGAGATGAAAGAACACTATTCAAGATCTCACAGCTTGTTTGCAGCACAGCCAAGAGGAGGACAGACATaGGACATAAGGAAGAGCAAG +
Preference number: 5 (lower is better)
Translates to: PEMKEHYSRSHSLFAAQPRGGQT*DIRKSK
Trigger: CTTGCTCTTCCTTATGTCCAATGTCTGTCCTCCTCT...TGGCTGTGCTGCAAACAAGCTGTGAGATCTTGAATAGTGTTCTTTCATCTCTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp AGCAATTTTAGTATGGGGCCCACTTTGATCAAGCATGACATGGAAGGCATACTCCTGCAGAGGTTCAGCTaGGCAAGCAAAACAAAGTCA +
Preference number: 5 (lower is better)
Translates to: SNFSMGPTLIKHDMEGILLQRFS*ASKTKS
Trigger: TGACTTTGTTTTGCTTGCCAAGCTGAACCTCTGCAG...GAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp AACCCAGATGCTCCAATTCCCAAACAGAACTGTGTCCAAGTCCATGGAAGCTCACTTCAATCACGTTTCTaGAATCTCATCACAGCCTGT +
Preference number: 5 (lower is better)
Translates to: NPDAPIPKQNCVQVHGSSLQSRF*NLITAC
Trigger: ACAGGCTGTGATGAGATTCAAGAAACGTGATTGAAG...TGAGCTTCCATGGACTTGGACACAGTTCTGTTTGGGAATTGGAGCATCTGGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp AAGCATGATTCCAGGGATTCTGGGTCATTGTGTATGGGCAGTTTCTCGAGTTCCGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: KHDSRDSGSLCMGSFSSSELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...GGAACTCGAGAAACTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521735.5
ENST00000522588.5
CDS-3UTR CAA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCCCGCTCTGGCAGGCTTaGTCCAATACCTTGCTAAAA +
Preference number: 5 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCPLWQA*SNTLLK
Trigger: TTTTAGCAAGGTATTGGACAAAGCCTGCCAGAGCGG...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS-3UTR CAA 90 bp ACTAAAATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTGAAATGTGGCAATGGTaGTGCCTCCAGCAGACCCAT +
Preference number: 5 (lower is better)
Translates to: TKIHHNTTLCVFQGTRLGEMWQW*CLQQTH
Trigger: ATGGGTCTGCTGGAGGCACAACCATTGCCACATTTC...ACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAATTTTAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: PVHANMNANEWLSCEPCPKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CAA 90 bp AGCAATTTTAGTATGGGGCCCACTTTGATCAAGCATGACATGGAAGGCATACTCTCCGGAAGCAAAGACTaGGATTTTAGTCTCAGGTTA +
Preference number: 5 (lower is better)
Translates to: SNFSMGPTLIKHDMEGILSGSKD*DFSLRL
Trigger: TAACCTGAGACTAAAATCCAAGTCTTTGCTTCCGGA...GAGTATGCCTTCCATGTCATGCTTGATCAAAGTGGGCCCCATACTAAAATTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCATAAGCATGAGTGAGTaGGATTTCAATGCCCACAGG +
Preference number: 5 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCISMSE*DFNAHR
Trigger: CCTGTGGGCATTGAAATCCAACTCACTCATGCTTAT...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp CCTGTTCATGCAAACATGAATGCGAATGAATGGCTAAGTTGTGAGCCATGTCCTGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: PVHANMNANEWLSCEPCPELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...AGGACATGGCTCACAACTTAGCCATTCATTCGCATTCATGTTTGCATGAACAGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS-3UTR CAA 90 bp TATCACAAGTTCATGGGAAAGATCCTGAAGCCTAATAAACACCTACGATGTTGCAGAGGGAGTATTTTGTaGATATCTGGAAGCCCACAC +
Preference number: 5 (lower is better)
Translates to: YHKFMGKILKPNKHLRCCRGSIL*ISGSPH
Trigger: GTGTGGGCTTCCAGATATCAACAAAATACTCCCTCT...GCAACATCGTAGGTGTTTATTAGGCTTCAGGATCTTTCCCATGAACTTGTGATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
CDS-3UTR CAA 90 bp ACAGAGGTAATTCTGACTGGGCTTGAGCTGAGAGTCATAAAGATCTTGCAATTTCTGCAGTCAAGCAGATaGAGACTCAGATGCTTATAT +
Preference number: 5 (lower is better)
Translates to: TEVILTGLELRVIKILQFLQSSR*RLRCLY
Trigger: ATATAAGCATCTGAGTCTCAATCTGCTTGACTGCAG...AAATTGCAAGATCTTTATGACTCTCAGCTCAAGCCCAGTCAGAATTACCTCTGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp AGCCTGAAAACTATATTTTTCAGACTTTCTTGCCCACTGGCTTCAGGTTATGTTCATCACAGCCTGTGCTaGCAAAGTGAGACAAAAAGA +
Preference number: 5 (lower is better)
Translates to: SLKTIFFRLSCPLASGYVHHSLC*QSETKR
Trigger: TCTTTTTGTCTCACTTTGCAAGCACAGGCTGTGATG...AACATAACCTGAAGCCAGTGGGCAAGAAAGTCTGAAAAATATAGTTTTCAGGCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS TCA 90 bp CTCACATTAGCATCAAGTTTGTCCATTACAGGAAATAAGCATGAGTaGGTTGGATTTCAATGCCCACAGGGTCCTTTTGGATATACAACA +
Preference number: 5 (lower is better)
Translates to: LTLASSLSITGNKHE*VGFQCPQGPFGYTT
Trigger: TGTTGTATATCCAAAAGGACCCTGTGGGCATTGAAATCCAACTCACTCATGCTTATTTCCTGTAATGGACAAACTTGATGCTAATGTGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS-3UTR CAA 90 bp AGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGTAGAAGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: RIEITQCLLSGHSGIKVEELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...TTCTACTTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR CAA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS-3UTR CAA 90 bp AAAAGAATAGAAATTACACAATGTCTGCTCTCAGGCCACAGTGGAATTAAAGTAAAAGGATCCACAATATaGGTGACAAAGAATGGTGCC +
Preference number: 5 (lower is better)
Translates to: KRIEITQCLLSGHSGIKVKGSTI*VTKNGA
Trigger: GGCACCATTCTTTGTCACCAATATTGTGGATCCTTT...TACTTTAATTCCACTGTGGCCTGAGAGCAGACATTGTGTAATTTCTATTCTTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS-3UTR CAA 90 bp ACTAAAATTCATCATAACACTACCCTCTGTGTGTTCCAGGGAACAAGATTAGGTAGCTGTATCTGTTATTaGCCACAGTTTTTATGCACT +
Preference number: 5 (lower is better)
Translates to: TKIHHNTTLCVFQGTRLGSCICY*PQFLCT
Trigger: AGTGCATAAAAACTGTGGCAAATAACAGATACAGCT...ACCTAATCTTGTTCCCTGGAACACACAGAGGGTAGTGTTATGATGAATTTTAGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000520086.1
CDS-3UTR CAA 90 bp CATCCAATGAATTTATTTGATAACTTCAGTGTACAAAAACCTGTGTTGGGCACTGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATC +
Preference number: 5 (lower is better)
Translates to: HPMNLFDNFSVQKPVLGTELEFW*NFLFSI
Trigger: GATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTC...AGTGCCCAACACAGGTTTTTGTACACTGAAGTTATCAAATAAATTCATTGGATG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000517929.5
CDS GCA 72 bp GAGCGGCCACCCCCAGCCGCTGAGCCGAGCTTCTGCTaGCGCCGCTGCCGCTGCGCTCCCAGCCGCTGCCTG +
Preference number: 6 (lower is better)
Translates to: ERPPPAAEPSFC*RRCRCAPSRCL
Trigger: CAGGCAGCGGCTGGGAGCGCAGCGGCAGCGGCGGCAGCAGAAGCTCGGCTCAGCGGCTGGGGGTGGCCGCTC
78% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS CCA 72 bp CAGAGGCGGGCTGGAGCGATCTCACCCGTTCCGGGCTaGCCAGCACGCGCCCTCCCTGGCCGGAGCGCTGCT +
Preference number: 6 (lower is better)
Translates to: QRRAGAISPVPG*PARALPGRSAA
Trigger: AGCAGCGCTCCGGCCAGGGAGGGCGCGTGCTGGCCAGCCCGGAACGGGTGAGATCGCTCCAGCCCGCCTCTG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS GCA 72 bp CCACAGGGTCCCGCTGCCAGAGGCGAGGGAGCGAGGTaGCCTGGCAGATTCGAGCGGCCACCCCCAGCCGCT +
Preference number: 6 (lower is better)
Translates to: PQGPAARGEGAR*PGRFERPPPAA
Trigger: AGCGGCTGGGGGTGGCCGCTCGAATCTGCCAGGGCACCTCGCTCCCTCGCCTCTGGCAGCGGGACCCTGTGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS CCA 72 bp GGGGGTGCCGCTCTGCCGGCAGGGCGCACAGGGGAGTaGGCACAGAGGCGGGCTGGAGCGATCTCACCCGTT +
Preference number: 6 (lower is better)
Translates to: GGAALPAGRTGE*AQRRAGAISPV
Trigger: AACGGGTGAGATCGCTCCAGCCCGCCTCTGTGCCCACTCCCCTGTGCGCCCTGCCGGCAGAGCGGCACCCCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000377888.8
ENST00000524063.3
CDS GCA 72 bp GGTCTCTGTCCTCATGCGATGAGTGCTATGCTGGTCTaGCGACTGAGGCCTGCTCTCGGAGGAGGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: GLCPHAMSAMLV*RLRPALGGGSC
Trigger: GCAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACTCATCGCATGAGGACAGAGACC
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS GCA 72 bp TGCGATGAGTGCTATGCTGGTCTGCCGACTGAGGCCTaGTCTCGGAGGAGGCTCCTGCCCGTTGTAACATCT +
Preference number: 6 (lower is better)
Translates to: CDECYAGLPTEA*SRRRLLPVVTS
Trigger: AGATGTTACAACGGGCAGGAGCCTCCTCCGAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACTCATCGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS GCA 72 bp TCTTGGCTGCTTTGGTCTCTGTCCTCATGCGATGAGTaGTATGCTGGTCTGCCGACTGAGGCCTGCTCTCGG +
Preference number: 6 (lower is better)
Translates to: SWLLWSLSSCDE*YAGLPTEACSR
Trigger: CCGAGAGCAGGCCTCAGTCGGCAGACCAGCATAGCACTCATCGCATGAGGACAGAGACCAAAGCAGCCAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS CCA 72 bp AGGGAAAACGGAGAAGCATGTGAGAGGCGTACGAGGTaGCACATACTCAGGGCTAGTGCCCTTCTGCACACT +
Preference number: 6 (lower is better)
Translates to: RENGEACERRTR*HILRASALLHT
Trigger: AGTGTGCAGAAGGGCACTAGCCCTGAGTATGTGCCACCTCGTACGCCTCTCACATGCTTCTCCGTTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519495.1
CDS CCA 72 bp GCTGCTGGTCTCAGGAGGACCTGGTCTAATTCACCCTaGATGATCATGGAAGAGAGGTCTCTCCAGGCACGA +
Preference number: 6 (lower is better)
Translates to: AAGLRRTWSNSP*MIMEERSLQAR
Trigger: TCGTGCCTGGAGAGACCTCTCTTCCATGATCATCCAGGGTGAATTAGACCAGGTCCTCCTGAGACCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS TCA 72 bp CGTCGAGAGAAACGTGAGCAGCACCACCTTCTCCACTaGCCCGAAACCCTCCTCAGAACTCACATTAGCATC +
Preference number: 6 (lower is better)
Translates to: RREKREQHHLLH*PETLLRTHISI
Trigger: GATGCTAATGTGAGTTCTGAGGAGGGTTTCGGGTCAGTGGAGAAGGTGGTGCTGCTCACGTTTCTCTCGACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 12 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000519495.1
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS CCA 72 bp CCTCCCCATAAATCCAGATGTCTTGAACCAGCTCAATaGCACCAAAGGGCATCACCAGCACCGAAACCAGCA +
Preference number: 6 (lower is better)
Translates to: PPHKSRCLEPAQ*HQRASPAPKPA
Trigger: TGCTGGTTTCGGTGCTGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAGACATCTGGATTTATGGGGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS CCA 72 bp TGGTTGTGGTTGAACAAGGGACAGTCTGGCCCAGAATaGAAGGTCTTCGGTAGCGCTCATCATCACAGCAGA +
Preference number: 6 (lower is better)
Translates to: WLWLNKGQSGPE*KVFGSAHHHSR
Trigger: TCTGCTGTGATGATGAGCGCTACCGAAGACCTTCCATTCTGGGCCAGACTGTCCCTTGTTCAACCACAACCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS GCA 72 bp CCTATCCAGAGAAATGCAGCACAGGTGAAAAATCGATaGCGTTGTGAGCAGGACGTCCAGAGATGTCCGAAC +
Preference number: 6 (lower is better)
Translates to: PIQRNAAQVKNR*RCEQDVQRCPN
Trigger: GTTCGGACATCTCTGGACGTCCTGCTCACAACGGCATCGATTTTTCACCTGTGCTGCATTTCTCTGGATAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS CCA 72 bp ATATACAACATCCACGCTGCTGGTCTCAGGAGGACCTaGTCTAATTCACCCTGGATGATCATGGAAGAGAGG +
Preference number: 6 (lower is better)
Translates to: IYNIHAAGLRRT*SNSPWMIMEER
Trigger: CCTCTCTTCCATGATCATCCAGGGTGAATTAGACCAGGTCCTCCTGAGACCAGCAGCGTGGATGTTGTATAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS CCA 72 bp ACGGTGTACAGAGCACTTTCAGAGTTAGACAGGAACTaGTCTATTGCAGAAGAGCAGGAGGAAGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: TVYRALSELDRN*SIAEEQEEAGD
Trigger: GTCTCCAGCTTCCTCCTGCTCTTCTGCAATAGACCAGTTCCTGTCTAACTCTGAAAGTGCTCTGTACACCGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521735.5
CDS CAA 90 bp AGATGTCCGAACAAGACAAAACACCTCCCCATAAATCCAGATGTCTaGAACCAGCTCAATGGCACCAAAGGGCATCACCAGCACCGAAAC +
Preference number: 6 (lower is better)
Translates to: RCPNKTKHLPINPDV*NQLNGTKGHHQHRN
Trigger: GTTTCGGTGCTGGTGATGCCCTTTGGTGCCATTGAGCTGGTTCAAGACATCTGGATTTATGGGGAGGTGTTTTGTCTTGTTCGGACATCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1
CDS TCA 72 bp CTTCCTTGCAGTCAAACATCTAATGCTCAATGTGCCTaGGAATGGACCCGCTCTGGCAGGCTTTGTCCAATA +
Preference number: 6 (lower is better)
Translates to: LPCSQTSNAQCA*EWTRSGRLCPI
Trigger: TATTGGACAAAGCCTGCCAGAGCGGGTCCATTCTCAGGCACATTGAGCATTAGATGTTTGACTGCAAGGAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS TCA 72 bp TCTTCCATTCTCCGTCTTGGAATGAACCCAGGAAAGTaGAGTAGGGAAAACGGAGAAGCATGTGAGAGGCGT +
Preference number: 6 (lower is better)
Translates to: SSILRLGMNPGK*SRENGEACERR
Trigger: ACGCCTCTCACATGCTTCTCCGTTTTCCCTACTTCACTTTCCTGGGTTCATTCCAAGACGGAGAATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519495.1
ENST00000520086.1
CDS TCA 72 bp TGGCTAAGTTGTGAGCCATGTCCTCAATCAGAAGCATaGTTCCAGGGATTCTGGGTCATTGTGTATGGGCAG +
Preference number: 6 (lower is better)
Translates to: WLSCEPCPQSEA*FQGFWVIVYGQ
Trigger: CTGCCCATACACAATGACCCAGAATCCCTGGAATCATGCTTCTGATTGAGGACATGGCTCACAACTTAGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521530.5
CDS CAA 72 bp CAAGTTTGTCCATTACAGGAAATAAGCATGAGTGAGTaGGATTTCAATGCCCACAGGGTCCCGCTGCCAGAG +
Preference number: 6 (lower is better)
Translates to: QVCPLQEISMSE*DFNAHRVPLPE
Trigger: CTCTGGCAGCGGGACCCTGTGGGCATTGAAATCCAACTCACTCATGCTTATTTCCTGTAATGGACAAACTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000360693.7
ENST00000377888.8
ENST00000524063.3
CDS CAA 90 bp CACTCCGGTGATAACAAAGCCTGGCTTTGTGTGAACTTTATAGCTTaGAGTATCTTTCTGATCCAGAAGGCAGCCCGGGGCATAAAGTAC +
Preference number: 6 (lower is better)
Translates to: HSGDNKAWLCVNFIA*SIFLIQKAARGIKY
Trigger: GTACTTTATGCCCCGGGCTGCCTTCTGGATCAGAAAGATACTCAAAGCTATAAAGTTCACACAAAGCCAGGCTTTGTTATCACCGGAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519495.1
CDS CAA 72 bp GATAACAAAGCCTGGCTTTGTGTGAACTTTATAGCTTaGAGTATCTTTCTGATCCAGAAGGCAGCCCGGGGC +
Preference number: 6 (lower is better)
Translates to: DNKAWLCVNFIA*SIFLIQKAARG
Trigger: GCCCCGGGCTGCCTTCTGGATCAGAAAGATACTCAAAGCTATAAAGTTCACACAAAGCCAGGCTTTGTTATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519495.1
CDS CCA 72 bp CCTCTCCCTCTTGAATGGTTGGTTGCTATCATCACTTaGGTCTCTCTATGGACCTCACTTATTGCACTGTAT +
Preference number: 6 (lower is better)
Translates to: PLPLEWLVAIIT*VSLWTSLIALY
Trigger: ATACAGTGCAATAAGTGAGGTCCATAGAGAGACCCAAGTGATGATAGCAACCAACCATTCAAGAGGGAGAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000519495.1
CDS CCA 72 bp AGTAGAAATAGAGCACTTTCAGAGTTAGACAGGAACTaGTCTATTGCAGAAGAGCAGGAGGAAGCTGGAGAC +
Preference number: 6 (lower is better)
Translates to: SRNRALSELDRN*SIAEEQEEAGD
Trigger: GTCTCCAGCTTCCTCCTGCTCTTCTGCAATAGACCAGTTCCTGTCTAACTCTGAAAGTGCTCTATTTCTACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522588.5
CDS CAA 72 bp AGAATGGACCCGCTCTGGCAGGCTTTGTCCAATACCTaGCTAAAATGTCTCTGTCAAACAGAAAATCTGTCC +
Preference number: 6 (lower is better)
Translates to: RMDPLWQALSNT*LKCLCQTENLS
Trigger: GGACAGATTTTCTGTTTGACAGAGACATTTTAGCAAGGTATTGGACAAAGCCTGCCAGAGCGGGTCCATTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360693.7
ENST00000362016.6
CDS CAA 72 bp ACCATGAAGACACAGTACGTAGAGTTAGAGTTCTGGTaGAACTTCCTCTTTTCTATCAAATCAATTATGCCA +
Preference number: 6 (lower is better)
Translates to: TMKTQYVELEFW*NFLFSIKSIMP
Trigger: TGGCATAATTGATTTGATAGAAAAGAGGAAGTTCAACCAGAACTCTAACTCTACGTACTGTGTCTTCATGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000360693.7
ENST00000362016.6
ENST00000377888.8
ENST00000517929.5
ENST00000520514.5
ENST00000521124.5
ENST00000521530.5
ENST00000521735.5
ENST00000522588.5
ENST00000524063.3
ENST00000631296.1