Pregenerated sensors for HTR3E (Homo sapiens)
Ensembl gene IDs: ENSG00000186038Ensembl transcript IDs: ENST00000335304.6, ENST00000415389.6, ENST00000425359.6, ENST00000431041.5, ENST00000436361.6, ENST00000440596.2
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCAGATaGCGTAAGAGGGACCTAGAACCATATGGTAGGACTGAAGGAAGC | + |
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Preference number: 1 (lower is better) Translates to: IGQVSGQKRYSLLCR*RKRDLEPYGRTEGS Trigger: GCTTCCTTCAGTCCTACCATATGGTTCTAGGTCCCTCTTACGTCATCTGCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR TCA 90 bp | AGCCAACAAAATGCAGGAACAGGGAGAAATGTCTGGGATTGGAATTaGTCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACT | + |
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Preference number: 1 (lower is better) Translates to: SQQNAGTGRNVWDWN*SAGPDWDTWNTAET Trigger: AGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAATCCCAGACATTTCTCCCTGTTCCTGCATTTTGTTGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCGTCTGGGATTGGAATTaGTCAGCAGGACCGGATTGG | + |
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Preference number: 2 (lower is better) Translates to: AELFIGQVSGQKRYSLLCVWDWN*SAGPDW Trigger: CCAATCCGGTCCTGCTGATCAATTCCAATCCCAGAC...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR CAA 90 bp | AAGCCAACAAAATGCAGGAACAGGGAGAAATGTCTGGGATTGGAATaGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGAC | + |
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Preference number: 2 (lower is better) Translates to: KPTKCRNREKCLGLE*ISRTGLGYMEYSRD Trigger: GTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAATCCCAGACATTTCTCCCTGTTCCTGCATTTTGTTGGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCCCGGATTGGGATACATaGAATACAGCAGAGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: AELFIGQVSGQKRYSLLCPDWDT*NTAETQ Trigger: CTGAGTCTCTGCTGTATTCCATGTATCCCAATCCGG...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR-3UTR CCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCTCAGCAGGACCGGATTaGGATACATGGAATACAGCA | + |
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Preference number: 2 (lower is better) Translates to: AELFIGQVSGQKRYSLLCSAGPD*DTWNTA Trigger: TGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGA...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR TCA 72 bp | GTCAGCGGACAGAAGAGGTATAGTCTGCTATGCAGATaGCGTAAGAGGGACCTAGAACCATATGGTAGGACT | + |
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Preference number: 3 (lower is better) Translates to: VSGQKRYSLLCR*RKRDLEPYGRT Trigger: AGTCCTACCATATGGTTCTAGGTCCCTCTTACGTCATCTGCATAGCAGACTATACCTCTTCTGTCCGCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCATCAGCAGGACCGGATaGGGATACATGGAATACAGC | + |
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Preference number: 3 (lower is better) Translates to: AELFIGQVSGQKRYSLLCISRTG*GYMEYS Trigger: GCTGTATTCCATGTATCCCAATCCGGTCCTGCTGAT...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| 3UTR-3UTR CAA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCTGTCTGGGATTGGAATaGATCAGCAGGACCGGATTG | + |
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Preference number: 3 (lower is better) Translates to: AELFIGQVSGQKRYSLLCCLGLE*ISRTGL Trigger: CAATCCGGTCCTGCTGATCAATTCCAATCCCAGACA...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGGACTGGGCCTGCGCCTaGTGGCCACATAGAACACGA | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGDWACA*WPHRTR Trigger: TCGTGTTCTATGTGGCCATCAGGCGCAGGCCCAGTC...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAGTGGGATCCGCCCCGTaGTGGCCAAACCCTGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSVGSAP*WPNPEQ Trigger: TTGCTCAGGGTTTGGCCAGCACGGGGCGGATCCCAC...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGACCTGTGCTCCCTATATaGGAGGGGCCCCAAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGPVLPI*EGPQGR Trigger: CCTGCCTTGGGGCCCCTCTCATATAGGGAGCACAGG...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000335304.6 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCACTGAATTCAGAGCAGTaGGATCCGCCCCGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSLNSEQ*DPPRAG Trigger: GCCAGCACGGGGCGGATCCCACTGCTCTGAATTCAG...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCGACTGGGCCTGCGCCTaGTGGCCACATAGAACACGA | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCDWACA*WPHRTR Trigger: TCGTGTTCTATGTGGCCATCAGGCGCAGGCCCAGTC...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCCTGAATTCAGAGCAGTaGGATCCGCCCCGTGCTGGC | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCLNSEQ*DPPRAG Trigger: GCCAGCACGGGGCGGATCCCACTGCTCTGAATTCAG...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCACATTCTCCATGGGTCTaGAGGATGTTCCGGGATGCG | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSHSPWV*RMFRDA Trigger: CGCATCCCGGAACATCCTTCAGACCCATGGAGAATG...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGGCACGAGAAGGTTTATaGCATAGAGACTGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGAREGL*HRDWAC Trigger: GCAGGCCCAGTCTCTATGTCATAAACCTTCTCGTGC...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCACAGGTTGCCTCCCCTaGACAACTTTGCGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCTGCLP*TTLRWP Trigger: AGGCCACCGCAAAGTTGTCCAGGGGAGGCAACCTGT...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAACAGGTTGCCTCCCCTaGACAACTTTGCGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGTGCLP*TTLRWP Trigger: AGGCCACCGCAAAGTTGTCCAGGGGAGGCAACCTGT...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGCACTGTGTAGAGGAATaGGCTGAAGGTGAGTGTGCA | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGHCVEE*AEGECA Trigger: TGCACACTCACCTTCAGCTCATTCCTCTACACAGTG...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCCATTCTCCATGGGTCTaGAGGATGTTCCGGGATGCG | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCHSPWV*RMFRDA Trigger: CGCATCCCGGAACATCCTTCAGACCCATGGAGAATG...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAGCACGAGAAGGTTTATaGCATAGAGACTGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSAREGL*HRDWAC Trigger: GCAGGCCCAGTCTCTATGTCATAAACCTTCTCGTGC...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAGTCTGGGATTGGAATTaGTCAGCAGGACCGGATTGG | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSVWDWN*SAGPDW Trigger: CCAATCCGGTCCTGCTGATCAATTCCAATCCCAGAC...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAGGAGAGCAACCCTGTaGTCCCTATATGAGAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGRRATL*SLYERG Trigger: GCCCCTCTCATATAGGGAGCACAGGGTTGCTCTCCT...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000335304.6 |
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| CDS-3UTR CCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGAAGGAGATGTTGACTTaGGTGGGGACGCTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGKEMLT*VGTLML Trigger: CAACATCAGCGTCCCCACCCAAGTCAACATCTCCTT...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGGCCCTCACATTCCTCTaGGTTCCAGCTGATAAATGG | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGALTFL*VPADKW Trigger: CCATTTATCAGCTGGAACCCAGAGGAATGTGAGGGC...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAATCGAATGTGTGAGATaGAGGAGAGCAACCCTGTGC | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSIECVR*RRATLC Trigger: GCACAGGGTTGCTCTCCTTCATCTCACACATTCGAT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335304.6 |
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| CDS-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCGCAGGAGCGTTATCTTaGATGGGACACGATTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCAGALS*MGHDSH Trigger: GTGGGAATCGTGTCCCATTCAAGATAACGCTCCTGC...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAGTAACGCCCCTTCCTTaGAGCAGAAAACCGAGAAGG | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGVTPLP*SRKPRR Trigger: CCTTCTCGGTTTTCTGCTTCAAGGAAGGGGCGTTAC...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCACCATGTCCAGCAACATaGTGTCCACTGTGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSPCPAT*CPLCRG Trigger: TCCTCTACACAGTGGACAGCATGTTGCTGGACATGG...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGTCTGATCATACAGGTTaGCTCCCCTGGACAACTTTG | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGSDHTG*LPWTTL Trigger: CAAAGTTGTCCAGGGGAGGCAACCTGTATGATCAGA...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGCCGGATTGGGATACATaGAATACAGCAGAGACTCAG | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGPDWDT*NTAETQ Trigger: CTGAGTCTCTGCTGTATTCCATGTATCCCAATCCGG...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCATCTCTGAACATGTACTaGGACCCAGGAATGCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSSLNMY*DPGMPR Trigger: TCTGGGCATTCCTGGGTCCCAGTACATGTTCAGAGA...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGATGGACATCGAATGTGTaGGATGAAGGAGAGCAACCC | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGWTSNV*DEGEQP Trigger: GGGTTGCTCTCCTTCATCTCACACATTCGATGTCCA...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000335304.6 |
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| CDS-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCCCATACTCATCTTCGTaGTGCCCTCACATTCCTCTG | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCPYSSS*CPHIPL Trigger: CAGAGGAATGTGAGGGCATCACGAAGATGAGTATGG...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAAGTCTGCTATGCAGATaGCGTAAGAGGGACCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSSLLCR*RKRDLE Trigger: TTCTAGGTCCCTCTTACGTCATCTGCATAGCAGACT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCCCATGTCCAGCAACATaGTGTCCACTGTGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCPCPAT*CPLCRG Trigger: TCCTCTACACAGTGGACAGCATGTTGCTGGACATGG...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGAGATGTTGACTTaGGTGGGGACGCTGATGTTG | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGKEMLT*VGTLML Trigger: CAACATCAGCGTCCCCACCCAAGTCAACATCTCCTT...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCACATTCACATCTAGGATaGCAGACATCGCGAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSHSHLG*QTSRRR Trigger: TCTCCTTCGCGATGTCTGCCATCCTAGATGTGAATG...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCGCCCTCACATTCCTCTaGGTTCCAGCTGATAAATGG | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCALTFL*VPADKW Trigger: CCATTTATCAGCTGGAACCCAGAGGAATGTGAGGGC...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCATGCTGTGAGGCCTTTTaGGGTCTTATCCACATCCAT | + |
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Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSCCEAF*GLIHIH Trigger: ATGGATGTGGATAAGACCCCAAAAGGCCTCACAGCA...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGTACTTACATATGCTGTaGGGCCTTTTGGGGTCTTAT | + |
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Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGYLHML*GLLGSY Trigger: ATAAGACCCCAAAAGGCCTCACAGCATATGTAAGTA...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCAGTCTGCTATGCAGATaGCGTAAGAGGGACCTAGAA | + |
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Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCSLLCR*RKRDLE Trigger: TTCTAGGTCCCTCTTACGTCATCTGCATAGCAGACT...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGACCACAGGTTCTTGGCTaGCATACTCATCTTCGTGAT | + |
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Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGPQVLG*HTHLRD Trigger: ATCACGAAGATGAGTATGGCAGCCAAGAACCTGTGG...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGATGTTCCGGGATaGGTCTGTTATTTCCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGKDVPG*VCYFPH Trigger: GTGTGGGAAATAACAGACGCATCCCGGAACATCCTT...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGATGCTGTGAGGCCTTTTaGGGTCTTATCCACATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGCCEAF*GLIHIH Trigger: ATGGATGTGGATAAGACCCCAAAAGGCCTCACAGCA...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGATCAGCAGGACCGGATTaGGATACATGGAATACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGSAGPD*DTWNTA Trigger: TGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGA...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| 3UTR CAA 72 bp | AAATGCAGGAACAGGGAGAAATGTCTGGGATTGGAATaGATCAGCAGGACCGGATTGGGATACATGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: KCRNREKCLGLE*ISRTGLGYMEY Trigger: GTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAATCCCAGACATTTCTCCCTGTTCCTGCATTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR TCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCAAAGCTAACATTTGTTaGGCACTGGCTGTGTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCKANIC*ALAVCQ Trigger: CTGACACACAGCCAGTGCTCAACAAATGTTAGCTTT...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335304.6 |
||
| CDS-3UTR TCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGTGGGTTTCTTATACCTaGTGCGACCTTCATTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGWVSYT*CDLHYL Trigger: TAAGTAATGAAGGTCGCATCAGGTATAAGAAACCCA...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR GCA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGTGGTTGTCTTGTTCTTaGCTATGCTTAAGGTTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SRDSVIFGDMIVGTQERGWLSCS*LCLRFS Trigger: ACTGAACCTTAAGCATAGGCAAGAACAAGACAACCA...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS-3UTR TCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGATACTTACATATGCTGTaGGGCCTTTTGGGGTCTTAT | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGYLHML*GLLGSY Trigger: ATAAGACCCCAAAAGGCCTCACAGCATATGTAAGTA...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCATGGGTTTCTTATACCTaGTGCGACCTTCATTACTTA | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSWVSYT*CDLHYL Trigger: TAAGTAATGAAGGTCGCATCAGGTATAAGAAACCCA...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR TCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAACTAATAGCATTGGTTaGCCACTGACATTTGTAACC | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSTNSIG*PLTFVT Trigger: GGTTACAAATGTCAGTGGTCAACCAATGCTATTAGT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAAATGATGACAAGAGGTaGAGCTGTTCATTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSNDDKR*SCSFTS Trigger: AGATGTGAATGAACAGCTGCACCTCTTGTCATCATT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCATTCATTACTTACATATaGTGTGAGGCCTTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSFITYI*CEAFWG Trigger: ACCCCAAAAGGCCTCACAGCATATGTAAGTAATGAA...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR GCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAAGAAGAGGTATAGTCTaGTATGCAGATGACGTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSRRGIV*YADDVR Trigger: TCTTACGTCATCTGCATAGCAGACTATACCTCTTCT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAACATTTGTTGAGCACTaGCTGTGTGTCAGGTATATT | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSTFVEH*LCVRYI Trigger: AATATACCTGACACACAGCCAGTGCTCAACAAATGT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000335304.6 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAAGACTCAGTCATCTTTaGGGATATGATAGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSRLSHL*GYDSWY Trigger: GTACCAACTATCATATCCCCAAAGATGACTGAGTCT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCATGCAGAATTATTTATTaGGCAAGTCAGCGGACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSCRIIY*ASQRTE Trigger: TTCTGTCCGCTGACTTGCCCAATAAATAATTCTGCA...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CCA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCACTTCAAAGAGTGTTCTaGTTGTCTTGTTCTTGCCTA | + |
|
Preference number: 4 (lower is better) Translates to: LELISRTGLGYMEYSRDSLQRVF*LSCSCL Trigger: TAGGCAAGAACAAGACAACCAGAACACTCTTTGAAG...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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| CDS-3UTR GCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAATGATGACAAGAGGTaGAGCTGTTCATTCACATCT | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGNDDKR*SCSFTS Trigger: AGATGTGAATGAACAGCTGCACCTCTTGTCATCATT...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR GCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGATTCATTACTTACATATaGTGTGAGGCCTTTTGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGFITYI*CEAFWG Trigger: ACCCCAAAAGGCCTCACAGCATATGTAAGTAATGAA...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR GCA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGATCTTGTTCTTGCCTATaGTTAAGGTTCAGTCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGSCSCL*LRFSLL Trigger: AAGCAGACTGAACCTTAAGCATAGGCAAGAACAAGA...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS-3UTR CCA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCAGACTCAGTCATCTTTaGGGATATGATAGTTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: AELFIGQVSGQKRYSLLCRLSHL*GYDSWY Trigger: GTACCAACTATCATATCCCCAAAGATGACTGAGTCT...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS TCA 90 bp | GATCATACAGGTTGCCTCCCCTGGACAACTTTGCGGTGGCCTTGCTaGGGCCCAGGAGCTCCCATTCTCCATGGGTCTGAAGGATGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: DHTGCLPWTTLRWPC*GPGAPILHGSEGCS Trigger: GGAACATCCTTCAGACCCATGGAGAATGGGAGCTCCTGGGCCTCAGCAAGGCCACCGCAAAGTTGTCCAGGGGAGGCAACCTGTATGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000335304.6 ENST00000415389.6 ENST00000425359.6 ENST00000436361.6 ENST00000440596.2 |
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| CDS-3UTR CAA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGGTGGGGACGCTGATGTaGGTGACCGGACGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: SRDSVIFGDMIVGTQERGVGTLM*VTGRKG Trigger: GCCCTTCCGTCCGGTCACCAACATCAGCGTCCCCAC...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAGTGGGGACGCTGATGTaGGTGACCGGACGGAAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGVGTLM*VTGRKG Trigger: GCCCTTCCGTCCGGTCACCAACATCAGCGTCCCCAC...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAAACTTTGCGGTGGCCTaGCTGAGGCCCAGGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LELISRTGLGYMEYSRDSNFAVA*LRPRSS Trigger: GGAGCTCCTGGGCCTCAGCAAGGCCACCGCAAAGTT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS GCA 90 bp | GCCCAGGAGCTCCCATTCTCCATGGGTCTGAAGGATGTTCCGGGATaGGTCTGTTATTTCCCACACTTCTTTCTCCATGTCCAGCAACAT | + |
|
Preference number: 5 (lower is better) Translates to: AQELPFSMGLKDVPG*VCYFPHFFLHVQQH Trigger: ATGTTGCTGGACATGGAGAAAGAAGTGTGGGAAATAACAGACGCATCCCGGAACATCCTTCAGACCCATGGAGAATGGGAGCTCCTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENST00000335304.6 ENST00000415389.6 ENST00000425359.6 ENST00000431041.5 ENST00000436361.6 ENST00000440596.2 |
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| CDS-3UTR CAA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAGGGAGCCACAGGTTCTaGGCTGCCATACTCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LELISRTGLGYMEYSRDSGSHRF*AAILIF Trigger: GAAGATGAGTATGGCAGCCAAGAACCTGTGGCTCCC...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS CCA 90 bp | GTTCTTGGCTGCCATACTCATCTTCGTGATGCCCTCACATTCCTCTaGGTTCCAGCTGATAAATGGGTTATCCCAAACCATTTCCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: VLGCHTHLRDALTFL*VPADKWVIPNHFQP Trigger: TGGCTGGAAATGGTTTGGGATAACCCATTTATCAGCTGGAACCCAGAGGAATGTGAGGGCATCACGAAGATGAGTATGGCAGCCAAGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335304.6 ENST00000415389.6 ENST00000431041.5 |
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| CDS-3UTR CAA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGATCAGCAGGACCGGATaGGGATACATGGAATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: SRDSVIFGDMIVGTQERGISRTG*GYMEYS Trigger: GCTGTATTCCATGTATCCCAATCCGGTCCTGCTGAT...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGTGTCTGGGATTGGAATaGATCAGCAGGACCGGATTG | + |
|
Preference number: 5 (lower is better) Translates to: SRDSVIFGDMIVGTQERGCLGLE*ISRTGL Trigger: CAATCCGGTCCTGCTGATCAATTCCAATCCCAGACA...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAAGCAGGAGCGTTATCTaGAATGGGACACGATTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: LELISRTGLGYMEYSRDSSRSVI*NGTRFP Trigger: TGGGAATCGTGTCCCATTCAAGATAACGCTCCTGCT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCAATCAGCAGGACCGGATaGGGATACATGGAATACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LELISRTGLGYMEYSRDSISRTG*GYMEYS Trigger: GCTGTATTCCATGTATCCCAATCCGGTCCTGCTGAT...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | AGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGAAAGGGGGCAAAGAGTGTTCTGGTaGTCTTGTTCTTGCCTATGC | + |
|
Preference number: 5 (lower is better) Translates to: SRDSVIFGDMIVGTQERGQRVFW*SCSCLC Trigger: GCATAGGCAAGAACAAGACAACCAGAACACTCTTTG...CCCCCTTTCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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| CDS-3UTR CAA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCAGTAACGCCCCTTCCTaGAAGCAGAAAACCGAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AELFIGQVSGQKRYSLLCSNAPS*KQKTEK Trigger: CTTCTCGGTTTTCTGCTTCAAGGAAGGGGCGTTACT...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCACTGCAGAATTATTTATaGGGCAAGTCAGCGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: LELISRTGLGYMEYSRDSLQNYL*GKSADR Trigger: TCTGTCCGCTGACTTGCCCAATAAATAATTCTGCAG...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CAA 90 bp | TTGGAATTGATCAGCAGGACCGGATTGGGATACATGGAATACAGCAGAGACTCATCATACGTGATCAACTaGCAGATCTTGGTGAGATCC | + |
|
Preference number: 5 (lower is better) Translates to: LELISRTGLGYMEYSRDSSYVIN*QILVRS Trigger: GGATCTCACCAAGATCTGCAAGTTGATCACGTATGA...TGAGTCTCTGCTGTATTCCATGTATCCCAATCCGGTCCTGCTGATCAATTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS-3UTR CAA 90 bp | GGAATACAGCAGAGACTCAGTCATCTTTGGGGATATGATAGTTGGTACTCAGGACTGCAGAATTATTTATaGGGCAAGTCAGCGGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: GIQQRLSHLWGYDSWYSGLQNYL*GKSADR Trigger: TCTGTCCGCTGACTTGCCCAATAAATAATTCTGCAG...TCCTGAGTACCAACTATCATATCCCCAAAGATGACTGAGTCTCTGCTGTATTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000335304.6 ENST00000415389.6 |
||
| CDS-3UTR CAA 90 bp | GCAGAATTATTTATTGGGCAAGTCAGCGGACAGAAGAGGTATAGTCTGCTATGCCTGGTTGTCTTGTTCTaGCCTATGCTTAAGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: AELFIGQVSGQKRYSLLCLVVLF*PMLKVQ Trigger: CTGAACCTTAAGCATAGGCAAGAACAAGACAACCAG...GCATAGCAGACTATACCTCTTCTGTCCGCTGACTTGCCCAATAAATAATTCTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS TCA 72 bp | GGTTGCCTCCCCTGGACAACTTTGCGGTGGCCTTGCTaGGGCCCAGGAGCTCCCATTCTCCATGGGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: GCLPWTTLRWPC*GPGAPILHGSE Trigger: TTCAGACCCATGGAGAATGGGAGCTCCTGGGCCTCAGCAAGGCCACCGCAAAGTTGTCCAGGGGAGGCAACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENST00000335304.6 ENST00000415389.6 ENST00000425359.6 ENST00000436361.6 ENST00000440596.2 |
||
| CDS TCA 72 bp | GTTGGTGACCGGACGGAAGGGCTTTCTATTAAACACTaGATTCAGAGCAGTGGGATCCGCCCCGTGCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: VGDRTEGLSIKH*IQSSGIRPVLA Trigger: GGCCAGCACGGGGCGGATCCCACTGCTCTGAATTCAGTGTTTAATAGAAAGCCCTTCCGTCCGGTCACCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENST00000335304.6 ENST00000415389.6 ENST00000425359.6 ENST00000431041.5 ENST00000436361.6 ENST00000440596.2 |
||
| CDS TCA 72 bp | ACGCCCCTTCCTGTAGTGGACATCGAATGTGTGAGATaGAGGAGAGCAACCCTGTGCTCCCTATATGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPLPVVDIECVR*RRATLCSLYER Trigger: CCTCTCATATAGGGAGCACAGGGTTGCTCTCCTTCATCTCACACATTCGATGTCCACTACAGGAAGGGGCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000335304.6 ENST00000436361.6 ENST00000440596.2 |
||
| CDS CCA 72 bp | TGCCATACTCATCTTCGTGATGCCCTCACATTCCTCTaGGTTCCAGCTGATAAATGGGTTATCCCAAACCAC | + |
|
Preference number: 6 (lower is better) Translates to: CHTHLRDALTFL*VPADKWVIPNH Trigger: GTGGTTTGGGATAACCCATTTATCAGCTGGAACCCAGAGGAATGTGAGGGCATCACGAAGATGAGTATGGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000425359.6 ENST00000436361.6 ENST00000440596.2 |
||
| CDS CCA 72 bp | TGCCATACTCATCTTCGTGATGCCCTCACATTCCTCTaGGTTCCAGCTGATAAATGGGTTATCCCAAACCAT | + |
|
Preference number: 6 (lower is better) Translates to: CHTHLRDALTFL*VPADKWVIPNH Trigger: ATGGTTTGGGATAACCCATTTATCAGCTGGAACCCAGAGGAATGTGAGGGCATCACGAAGATGAGTATGGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENST00000335304.6 ENST00000415389.6 ENST00000431041.5 |
||
| CDS CCA 72 bp | CATCTTCTTTGTCTAAGTTCTTCTCTGAACATGTACTaGGACCCAGGAATGCCCAGATTAAAGCAGCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: HLLCLSSSLNMY*DPGMPRLKQHR Trigger: CCTGTGCTGCTTTAATCTGGGCATTCCTGGGTCCCAGTACATGTTCAGAGAAGAACTTAGACAAAGAAGATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS CCA 72 bp | CCACTGACATTTGTAACCTTCCTTCAAAGAGTGTTCTaGTTGTCTTGTTCTTGCCTATGCTTAAGGTTCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PLTFVTFLQRVF*LSCSCLCLRFS Trigger: ACTGAACCTTAAGCATAGGCAAGAACAAGACAACCAGAACACTCTTTGAAGGAAGGTTACAAATGTCAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
||
| CDS CAA 72 bp | CTGACATTTGTAACCTTCCTTCAAAGAGTGTTCTGGTaGTCTTGTTCTTGCCTATGCTTAAGGTTCAGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: LTFVTFLQRVFW*SCSCLCLRFSL Trigger: CAGACTGAACCTTAAGCATAGGCAAGAACAAGACAACCAGAACACTCTTTGAAGGAAGGTTACAAATGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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| CDS CAA 72 bp | AACCTTCCTTCAAAGAGTGTTCTGGTTGTCTTGTTCTaGCCTATGCTTAAGGTTCAGTCTGCTTTTAAGACT | + |
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Preference number: 6 (lower is better) Translates to: NLPSKSVLVVLF*PMLKVQSAFKT Trigger: AGTCTTAAAAGCAGACTGAACCTTAAGCATAGGCAAGAACAAGACAACCAGAACACTCTTTGAAGGAAGGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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| CDS CCA 72 bp | ATACGTGATCAACTTGCAGATCTTGGTGAGATCCCTTaGTCTGAAGACTCATCTCTTCAATTTTGGAAAATT | + |
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Preference number: 6 (lower is better) Translates to: IRDQLADLGEIP*SEDSSLQFWKI Trigger: AATTTTCCAAAATTGAAGAGATGAGTCTTCAGACCAAGGGATCTCACCAAGATCTGCAAGTTGATCACGTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000415389.6 |
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