Pregenerated sensors for HTR3C (Homo sapiens)
Ensembl gene IDs: ENSG00000178084Ensembl transcript IDs: ENST00000318351.2
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCCTGAGCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTaGTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGAC | + |
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Preference number: 1 (lower is better) Translates to: QPEQRSGNRPGLSRT*LLVLRWSLWNLEGD Trigger: GTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGCTCAGGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR TCA 90 bp | TGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATTaGTCAGGGAGTGAGGAGTTAGGTGGTAGCTCAGGGAGACTGAGG | + |
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Preference number: 1 (lower is better) Translates to: WGDQSRRDSTDLDFH*SGSEELGGSSGRLR Trigger: CCTCAGTCTCCCTGAGCTACCACCTAACTCCTCACTCCCTGATCAATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CCA 90 bp | CCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTaGAATTTAGAAGGGGACATGGTAGTCACTGGGGATAAGTGGCTA | + |
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Preference number: 1 (lower is better) Translates to: PGLSRTCLLVLRWSL*NLEGDMVVTGDKWL Trigger: TAGCCACTTATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CCA 90 bp | GGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTaGAGTCTTTGGAATTTAGAAGGGGACATGGTAGTCACTGGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GNRPGLSRTCLLVLR*SLWNLEGDMVVTGD Trigger: ATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR-3UTR TCA 90 bp | GCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGCTAAGATTAGGAAAATaGGTCCGGCTGGCCCAAGAC | + |
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Preference number: 2 (lower is better) Translates to: AAVGKSSRAVPNLLASAALRLGK*VRLAQD Trigger: GTCTTGGGCCAGCCGGACTCATTTTCCTAATCTTAG...CGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CAA 90 bp | CCTGAGCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTaGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATG | + |
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Preference number: 2 (lower is better) Translates to: PEQRSGNRPGLSRTC*LVLRWSLWNLEGDM Trigger: CATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGCTCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CAA 90 bp | GGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTaGGAGTCTTTGGAATTTAGAAGGGGACATGGTAGTCACTGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GKSSRAVPNLLASAA*ESLEFRRGHGSHWG Trigger: TCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCGGGCTGTCCCGAACCTaGTTGCTAGTGCTGCGTTGG | + |
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Preference number: 2 (lower is better) Translates to: KVVYWGDQSRRDSTDLDFGLSRT*LLVLRW Trigger: CCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCC...GAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR-3UTR CCA 90 bp | CCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATGAAAATGAGTCCGGCTaGCCCAAGACCAGCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: PNLLASAALESLEFRRGHENESG*PKTSRN Trigger: GTTTCTGCTGGTCTTGGGCCAGCCGGACTCATTTTC...ATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACCTGCGTTGGAGTCTTTaGAATTTAGAAGGGGACATG | + |
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Preference number: 2 (lower is better) Translates to: WKVVYWGDQSRRDSTDLDLRWSL*NLEGDM Trigger: CATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAG...GTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR GCA 72 bp | CAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTaGTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTA | + |
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Preference number: 3 (lower is better) Translates to: QRSGNRPGLSRT*LLVLRWSLWNL Trigger: TAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CCA 72 bp | TCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTaGAATTTAGAAGGGGACATGGTAGTCACTGGGGAT | + |
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Preference number: 3 (lower is better) Translates to: SRTCLLVLRWSL*NLEGDMVVTGD Trigger: ATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR TCA 72 bp | GTAGTCACTGGGGATAAGTGGCTAAGATTAGGAAAATaGGTCCGGCTGGCCCAAGACCAGCAGAAACTCCAA | + |
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Preference number: 3 (lower is better) Translates to: VVTGDKWLRLGK*VRLAQDQQKLQ Trigger: TTGGAGTTTCTGCTGGTCTTGGGCCAGCCGGACTCATTTTCCTAATCTTAGCCACTTATCCCCAGTGACTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATTGATCAGGGAGTGAGGGCTGCGTTGGAGTCTTaGGAATTTAGAAGGGGACAT | + |
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Preference number: 3 (lower is better) Translates to: INQGETPLTWTSIDQGVRAALES*EFRRGH Trigger: ATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGC...CCTCACTCCCTGATCAATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR-3UTR CAA 90 bp | ATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATTGATCAGGGAGTGAGGCTTGCTAGTGCTGCGTaGGAGTCTTTGGAATTTAGA | + |
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Preference number: 3 (lower is better) Translates to: INQGETPLTWTSIDQGVRLASAA*ESLEFR Trigger: TCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAG...CCTCACTCCCTGATCAATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | GCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGCTGGCTCGGTCTCTCTaGGTCCCAGCTTCTTCCCTG | + |
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Preference number: 4 (lower is better) Translates to: AAVGKSSRAVPNLLASAALARSL*VPASSL Trigger: CAGGGAAGAAGCTGGGACCCAGAGAGACCGAGCCAG...CGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | GGAATGAGCAGCCTGAGCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTAGACCGGAAGGCGTCTaGTCCACATCCATGGATTCC | + |
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Preference number: 4 (lower is better) Translates to: GMSSLSSGREIVQGCPEPRPEGV*STSMDS Trigger: GGAATCCATGGATGTGGATCAGACGCCTTCCGGTCT...AGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGCTCAGGCTGCTCATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | AATGAGCAGCCTGAGCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCCACTCCCCCTGGGTTTaGATGACTTTGCGAGACGTG | + |
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Preference number: 4 (lower is better) Translates to: NEQPEQRSGNRPGLSRTCHSPWV*MTLRDV Trigger: CACGTCTCGCAAAGTCATCCAAACCCAGGGGGAGTG...GCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGCTCAGGCTGCTCATT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | TCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCCCCCTGGGTTTGGATaGCTTTGCGAGACGTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: SGNRPGLSRTCLLVLRWSPPGFG*LCETCL Trigger: CAGACACGTCTCGCAAAGTCATCCAAACCCAGGGGG...ACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | GGAATGAGCAGCCTGAGCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTAATGATGTCAGCAGCTaGAGCTGTGCATCCACTCCC | + |
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Preference number: 4 (lower is better) Translates to: GMSSLSSGREIVQGCPEPNDVSS*SCASTP Trigger: GGGAGTGGATGCACAGCTCCAGCTGCTGACATCATT...AGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGCTCAGGCTGCTCATTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR GCA 90 bp | TCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCCATGCCCAGCAGCATaGTGTCCACTGTGTAGAGGA | + |
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Preference number: 4 (lower is better) Translates to: SGNRPGLSRTCLLVLRWSPCPAA*CPLCRG Trigger: TCCTCTACACAGTGGACAGCATGCTGCTGGGCATGG...ACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | TCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTAAGGAGAGACTCCACTaGCCTGGACTTCCATTGATC | + |
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Preference number: 4 (lower is better) Translates to: SGNRPGLSRTCLLVLRWSKERLH*PGLPLI Trigger: GATCAATGGAAGTCCAGGTCAGTGGAGTCTCTCCTT...ACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | TCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTATAGGTTGTTGCCCATaGACATCTTTGGGGTGGCCT | + |
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Preference number: 4 (lower is better) Translates to: SGNRPGLSRTCLLVLRWSIGCCP*TSLGWP Trigger: AGGCCACCCCAAAGATGTCCATGGGCAACAACCTAT...ACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CAA 72 bp | CGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTaGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: RSGNRPGLSRTC*LVLRWSLWNLE Trigger: TTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | TCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTAAGTGTTATCTTGAATaGGGCACGATTCTCGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SGNRPGLSRTCLLVLRWSKCYLE*GTILAL Trigger: GAGAGCGAGAATCGTGCCCCATTCAAGATAACACTT...ACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CAA 72 bp | GTCCCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCTTaGGAATTTAGAAGGGGACATGGTAGTCACTGGGGA | + |
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Preference number: 4 (lower is better) Translates to: VPNLLASAALES*EFRRGHGSHWG Trigger: TCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| 3UTR CAA 72 bp | TCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTaGGAGTCTTTGGAATTTAGAAGGGGACATGGTAGT | + |
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Preference number: 4 (lower is better) Translates to: SRAVPNLLASAA*ESLEFRRGHGS Trigger: ACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | CTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATGGTAGTGCGTCGCCTCTTCCTTaGAGCAGAAGACTGACAGTG | + |
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Preference number: 4 (lower is better) Translates to: LLASAALESLEFRRGHGSASPLP*SRRLTV Trigger: CACTGTCAGTCTTCTGCTTCAAGGAAGAGGCGACGC...ACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | AAGATTAGGAAAATGAGTCCGGCTGGCCCAAGACCAGCAGAAACTCCAAGCTGTGGATGCTGTAGTTGGTaGATGGACGGAAGGCCTTTC | + |
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Preference number: 4 (lower is better) Translates to: KIRKMSPAGPRPAETPSCGCCSW*MDGRPF Trigger: GAAAGGCCTTCCGTCCATTCACCAACTACAGCATCC...ACAGCTTGGAGTTTCTGCTGGTCTTGGGCCAGCCGGACTCATTTTCCTAATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | CCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATATCCATCCACAGGAATaGTGTCAGCAGCTGGAGCTG | + |
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Preference number: 4 (lower is better) Translates to: PNLLASAALESLEFRRGHIHPQE*CQQLEL Trigger: CAGCTCCAGCTGCTGACATCATTCCTGTGGATGGAT...ATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | CCGAACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATCCATGGATTCCACGATaGAGATGTCTGGGAGCCACA | + |
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Preference number: 4 (lower is better) Translates to: PNLLASAALESLEFRRGHPWIPR*RCLGAT Trigger: TGTGGCTCCCAGACATCTTCATCGTGGAATCCATGG...ATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTTCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | CTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATGGTAGTTGCGAGACGTGTCTGTaGTCTCCCACACCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: LLASAALESLEFRRGHGSCETCL*SPTPPC Trigger: ACAAGGAGGTGTGGGAGATCACAGACACGTCTCGCA...ACTACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR GCA 90 bp | TGGAATTTAGAAGGGGACATGGTAGTCACTGGGGATAAGTGGCTAAGATTAGGAGGGCTGTCCCGAACCTaGTTGCTAGTGCTGCGTTGG | + |
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Preference number: 4 (lower is better) Translates to: WNLEGDMVVTGDKWLRLGGLSRT*LLVLRW Trigger: CCAACGCAGCACTAGCAAGCAGGTTCGGGACAGCCC...TCCTAATCTTAGCCACTTATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | TGGAGTCTTTGGAATTTAGAAGGGGACATGGTAGTCACTGGGGATAAGTGGCTAGCACCAGCAGGTTTATaGTGTAGAGGCTTGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: WSLWNLEGDMVVTGDKWLAPAGL*CRGLAC Trigger: GCAGGCCAAGCCTCTACATCATAAACCTGCTGGTGC...TAGCCACTTATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | TGGAAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACAGCTCCCACTCCCCCTaGGTTTGGATGACTTTGCGA | + |
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Preference number: 4 (lower is better) Translates to: WKVVYWGDQSRRDSTDLDSSHSP*VWMTLR Trigger: TCGCAAAGTCATCCAAACCCAGGGGGAGTGGGAGCT...GTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | ATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATTGATCAGGGAGTGAGGGAGACTCCACTGACCTaGACTTCCATTGATCAGGGA | + |
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Preference number: 4 (lower is better) Translates to: INQGETPLTWTSIDQGVRETPLT*TSIDQG Trigger: TCCCTGATCAATGGAAGTCCAGGTCAGTGGAGTCTC...CCTCACTCCCTGATCAATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | AACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATGGTGCAGAAGTGTTATCTTaGATGGGGCACGATTCTCGC | + |
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Preference number: 4 (lower is better) Translates to: NLLASAALESLEFRRGHGAEVLS*MGHDSR Trigger: GCGAGAATCGTGCCCCATTCAAGATAACACTTCTGC...ACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR GCA 90 bp | AAGATTAGGAAAATGAGTCCGGCTGGCCCAAGACCAGCAGAAACTCCAAGCTGTGGTCATATAGGTTGTTaGCCATGGACATCTTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KIRKMSPAGPRPAETPSCGHIGC*PWTSLG Trigger: CCCCAAAGATGTCCATGGGCAACAACCTATATGACC...ACAGCTTGGAGTTTCTGCTGGTCTTGGGCCAGCCGGACTCATTTTCCTAATCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | GTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATCTAAGATTAGGAAAATaGGTCCGGCTGGCCCAAGAC | + |
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Preference number: 4 (lower is better) Translates to: VVYWGDQSRRDSTDLDFHLRLGK*VRLAQD Trigger: GTCTTGGGCCAGCCGGACTCATTTTCCTAATCTTAG...ATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTTTGGAATTTAGAAGGGGACATGGTAGTCACTGGGGATAAGTGGCTACTGCGTTGGAGTCTTTaGAATTTAGAAGGGGACATG | + |
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Preference number: 4 (lower is better) Translates to: WSLWNLEGDMVVTGDKWLLRWSL*NLEGDM Trigger: CATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAG...TAGCCACTTATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCAAAGACTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | AAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCAGTTGTTTATTGGGGTaGTCAATCAAGGAGAGACTC | + |
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Preference number: 4 (lower is better) Translates to: KLFIGVINQGETPLTWTSSCLLG*SIKERL Trigger: GAGTCTCTCCTTGATTGATCACCCCAATAAACAACT...GGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR TCA 90 bp | AAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCTGGCCACATAAAACATaGTCTGGTCATATAGGTTGT | + |
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Preference number: 4 (lower is better) Translates to: KLFIGVINQGETPLTWTSWPHKT*SGHIGC Trigger: ACAACCTATATGACCAGATCATGTTTTATGTGGCCA...GGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCGCTGGTCACCCTCATTaGCTTATCATACTTAATTCG | + |
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Preference number: 4 (lower is better) Translates to: KVVYWGDQSRRDSTDLDFAGHPH*LIILNS Trigger: CGAATTAAGTATGATAAGCCAATGAGGGTGACCAGC...GAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCTTGCTAGTGCTGCGTTaGAGTCTTTGGAATTTAGAA | + |
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Preference number: 4 (lower is better) Translates to: KVVYWGDQSRRDSTDLDFLLVLR*SLWNLE Trigger: TTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAA...GAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CCA 90 bp | AAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCTGGAAAGTTGTTTATTaGGGTGATCAATCAAGGAGA | + |
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Preference number: 4 (lower is better) Translates to: KVVYWGDQSRRDSTDLDFWKVVY*GDQSRR Trigger: TCTCCTTGATTGATCACCCCAATAAACAACTTTCCA...GAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGAGTGAGGAGTTAGGTGGTAGCTCAGGGAGACTGAGGGTGAGCAGGAATTTTGGGGTGGCCTTGTaGATGCCCAAGAGCTCCCAC | + |
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Preference number: 5 (lower is better) Translates to: SGSEELGGSSGRLRVSRNFGVAL*MPKSSH Trigger: GTGGGAGCTCTTGGGCATCAACAAGGCCACCCCAAA...ATTCCTGCTCACCCTCAGTCTCCCTGAGCTACCACCTAACTCCTCACTCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | GGAATGAGCAGCCTGAGCAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTATCTGGTCATATAGGTaGTTGCCCATGGACATCTTT | + |
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Preference number: 5 (lower is better) Translates to: GMSSLSSGREIVQGCPEPIWSYR*LPMDIF Trigger: AAAGATGTCCATGGGCAACAACCTATATGACCAGAT...AGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTGCTCAGGCTGCTCATTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | TCAGGGAGTGAGGAGTTAGGTGGTAGCTCAGGGAGACTGAGGGTGAGCAGGAATTGGGTTTGGATGACTTaGCGAGACGTGTCTGTGATC | + |
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Preference number: 5 (lower is better) Translates to: SGSEELGGSSGRLRVSRNWVWMT*RDVSVI Trigger: GATCACAGACACGTCTCGCAAAGTCATCCAAACCCA...ATTCCTGCTCACCCTCAGTCTCCCTGAGCTACCACCTAACTCCTCACTCCCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | CAGCGGTCGGGAAATCGTCCAGGGCTGTCCCGAACCTGCTTGCTAGTGCTGCGTCAATTAATGAAAGGATaGTCCCATACCAAATCCATC | + |
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Preference number: 5 (lower is better) Translates to: QRSGNRPGLSRTCLLVLRQLMKG*SHTKSI Trigger: GATGGATTTGGTATGGGACAATCCTTTCATTAATTG...ACGCAGCACTAGCAAGCAGGTTCGGGACAGCCCTGGACGATTTCCCGACCGCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | TGGAAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACCCACTCCCCCTGGGTTaGGATGACTTTGCGAGACGT | + |
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Preference number: 5 (lower is better) Translates to: WKVVYWGDQSRRDSTDLDPLPLG*DDFARR Trigger: ACGTCTCGCAAAGTCATCCAAACCCAGGGGGAGTGG...GTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATCTGTCCCGAACCTGCTaGCTAGTGCTGCGTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: VVYWGDQSRRDSTDLDFHLSRTC*LVLRWS Trigger: ACTCCAACGCAGCACTAGCAAGCAGGTTCGGGACAG...ATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | TGGAAAGTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTCAAAGCCTGAGCAATaGATGGTAAAAGCGTCGCCT | + |
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Preference number: 5 (lower is better) Translates to: WKVVYWGDQSRRDSTDLDSKPEQ*MVKASP Trigger: AGGCGACGCTTTTACCATCAATTGCTCAGGCTTTGA...GTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAACTTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | GTTGTTTATTGGGGTGATCAATCAAGGAGAGACTCCACTGACCTGGACTTCCATGCTGCGTTGGAGTCTTaGGAATTTAGAAGGGGACAT | + |
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Preference number: 5 (lower is better) Translates to: VVYWGDQSRRDSTDLDFHAALES*EFRRGH Trigger: ATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGC...ATGGAAGTCCAGGTCAGTGGAGTCTCTCCTTGATTGATCACCCCAATAAACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | AACCTGCTTGCTAGTGCTGCGTTGGAGTCTTTGGAATTTAGAAGGGGACATGGTCTTGCTAGTGCTGCGTaGGAGTCTTTGGAATTTAGA | + |
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Preference number: 5 (lower is better) Translates to: NLLASAALESLEFRRGHGLASAA*ESLEFR Trigger: TCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAG...ACCATGTCCCCTTCTAAATTCCAAAGACTCCAACGCAGCACTAGCAAGCAGGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS-3UTR CAA 90 bp | TGGAATTTAGAAGGGGACATGGTAGTCACTGGGGATAAGTGGCTAAGATTAGGATGGTCATATAGGTTGTaGCCCATGGACATCTTTGGG | + |
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Preference number: 5 (lower is better) Translates to: WNLEGDMVVTGDKWLRLGWSYRL*PMDIFG Trigger: CCCAAAGATGTCCATGGGCAACAACCTATATGACCA...TCCTAATCTTAGCCACTTATCCCCAGTGACTACCATGTCCCCTTCTAAATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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| CDS TCA 72 bp | GAAAGGATTGTCCCATACCAAATCCATCCACAGGAATaGTGTCAGCAGCTGGAGCTGTGCATCCACTCCCAG | + |
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Preference number: 6 (lower is better) Translates to: ERIVPYQIHPQE*CQQLELCIHSQ Trigger: CTGGGAGTGGATGCACAGCTCCAGCTGCTGACATCATTCCTGTGGATGGATTTGGTATGGGACAATCCTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000318351.2 |
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