RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HTR3B (Homo sapiens)

Ensembl gene IDs: ENSG00000149305

Ensembl transcript IDs: ENST00000260191.7, ENST00000537778.5, ENST00000543092.1

Found 269 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp AGCCAGAATCGACATGGATGGCAAGCTAAGGTGACATCAGGACCGTaGTGCCTAACTGAGCACGTCAAAGCAGAGGAGGCCAGCAGTAGA +
Preference number: 1 (lower is better)
Translates to: SQNRHGWQAKVTSGP*CLTEHVKAEEASSR
Trigger: TCTACTGCTGGCCTCCTCTGCTTTGACGTGCTCAGTTAGGCATCACGGTCCTGATGTCACCTTAGCTTGCCATCCATGTCGATTCTGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR GCA 90 bp GTGTCTTCTACTGACAGCGTTAAGACTGTCAGCAGGTCTCCAGCCTaGCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAT +
Preference number: 1 (lower is better)
Translates to: VSSTDSVKTVSRSPA*QPTLQNLDLLNLRN
Trigger: ATTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGACCTGCTGACAGTCTTAACGCTGTCAGTAGAAGACAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR CCA 90 bp GAGGAGTTCACCTCAGGCCTTTTCCTCCTTTCCTCCTCTGTTAACTaGAGGAGGAAGTGGAGAAAGCCAGAATCGACATGGATGGCAAGC +
Preference number: 1 (lower is better)
Translates to: EEFTSGLFLLSSSVN*RRKWRKPESTWMAS
Trigger: GCTTGCCATCCATGTCGATTCTGGCTTTCTCCACTTCCTCCTCCAGTTAACAGAGGAGGAAAGGAGGAAAAGGCCTGAGGTGAACTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR TCA 90 bp CTGAGCACGTCAAAGCAGAGGAGGCCAGCAGTAGAAAGTAGGAAGTaGGGAAGGAAACAGGTGGAGGTTTGCATGGACACTTCCTGTTCA +
Preference number: 1 (lower is better)
Translates to: LSTSKQRRPAVESRK*GRKQVEVCMDTSCS
Trigger: TGAACAGGAAGTGTCCATGCAAACCTCCACCTGTTTCCTTCCTCACTTCCTACTTTCTACTGCTGGCCTCCTCTGCTTTGACGTGCTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR TCA 90 bp CATGAACATATGATCCTTGGGTCACACAGCAGACTATTAGGTGTATaGAGCTGGACTCAATGGAGAGGCAATGAAGGCAGAAAGCCTTTT +
Preference number: 1 (lower is better)
Translates to: HEHMILGSHSRLLGV*SWTQWRGNEGRKPF
Trigger: AAAAGGCTTTCTGCCTTCATTGCCTCTCCATTGAGTCCAGCTTCATACACCTAATAGTCTGCTGTGTGACCCAAGGATCATATGTTCATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGGTGGGGATGCACTGCTaGAGGGGCACAGGAAGAGGG +
Preference number: 2 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWVGMHC*RGTGRG
Trigger: CCCTCTTCCTGTGCCCCTTCAGCAGTGCATCCCCAC...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR CAA 90 bp CCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGCCACCCACCCTGTTaGCACCTTGATCTTAGGCTTCTAGCTTCCAGACTGGTGAGAAAA +
Preference number: 2 (lower is better)
Translates to: PASQGQGSEESHPPC*HLDLRLLASRLVRK
Trigger: TTTTCTCACCAGTCTGGAAGCTAGAAGCCTAAGATCAAGGTGCAAACAGGGTGGGTGGCTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCATCTCTCCAGTGGGGATaGACTGCTGAAGGGGCACAG +
Preference number: 2 (lower is better)
Translates to: IITSLKQRTVNYACPPTPSLQWG*TAEGAQ
Trigger: CTGTGCCCCTTCAGCAGTGCATCCCCACTGGAGAGA...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGAACCTCCCAAGTAGCTaGGAGTACAGGCATGAGCCA +
Preference number: 2 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLNLPSS*EYRHEP
Trigger: TGGCTCATGCCTGTACTCTCAGCTACTTGGGAGGTT...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTGCACTCCAATCTGGTaGCAGAGCAAGACTCTGCCT +
Preference number: 2 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLCTPIW*QSKTLP
Trigger: AGGCAGAGTCTTGCTCTGTCACCAGATTGGAGTGCA...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGAGTGGTTGCTTTGGGTaGGTGGACTGGGATAAGAAG +
Preference number: 2 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLSGCFG*VDWDKK
Trigger: CTTCTTATCCCAGTCCACTCACCCAAAGCAACCACT...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGAAGGACCGTGAACTATaGCTGTCCTCCCACTCCATG +
Preference number: 2 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWKDREL*LSSHSM
Trigger: CATGGAGTGGGAGGACAGGCATAGTTCACGGTCCTT...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGAAGAAGTCAGCAACCTaGAAGCCAAGGACAGGGCTC +
Preference number: 2 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWKKSAT*KPRTGL
Trigger: GAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTT...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTGCAATCATGGCTCACTaGAGCCTTGAAATCCTGGGC +
Preference number: 2 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSAIMAH*SLEILG
Trigger: GCCCAGGATTTCAAGGCTGCAGTGAGCCATGATTGC...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATATGGCAGGAATTTTATaGTCTGGTTGGTTGGTACCA +
Preference number: 2 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDMAGIL*SGWLVP
Trigger: TGGTACCAACCAACCAGAGCATAAAATTCCTGCCAT...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR CAA 90 bp ATGTTCCTCATTTCATTAACAGCAGCAGTGGAATTTCATGGACAATaGGCGCTGAGCACTAACTGGGAGGTAATGAGAGAGGGAAGATGC +
Preference number: 2 (lower is better)
Translates to: MFLISLTAAVEFHGQ*ALSTNWEVMREGRC
Trigger: GCATCTTCCCTCTCTCATTACCTCCCAGTTAGTGCTCAGCGCCAATTGTCCATGAAATTCCACTGCTGCTGTTAATGAAATGAGGAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTCAATGGAGAGGCAATaGAGGCAGAAAGCCTTTTAT +
Preference number: 2 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLSMERQ*RQKAFY
Trigger: ATAAAAGGCTTTCTGCCTTCATTGCCTCTCCATTGA...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCATGTGTGTGGACTAAATaGTGTGCTAGACTGGGCTTA +
Preference number: 2 (lower is better)
Translates to: IITSLKQRTVNYACPPTPCVWTK*CARLGL
Trigger: TAAGCCCAGTCTAGCACATCATTTAGTCCACACACA...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATATAGATGCATGTGTGTaGCTAGAAATCTTCTGGAAG +
Preference number: 2 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDIDACV*LEIFWK
Trigger: CTTCCAGAAGATTTCTAGGCACACACATGCATCTAT...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR CCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAAGGAATTTTATGCTCTaGTTGGTTGGTACCAGGTTG +
Preference number: 2 (lower is better)
Translates to: IITSLKQRTVNYACPPTPRNFML*LVGTRL
Trigger: CAACCTGGTACCAACCAACCAGAGCATAAAATTCCT...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR TCA 90 bp TGCCACGTTGCTGTGCTGCACCCATTAACATTAGGTATATCTTCTAATGCTATCGTTTTGTTGAATGGGTaGCTGAATAAATGGCCAAGG +
Preference number: 2 (lower is better)
Translates to: CHVAVLHPLTLGISSNAIVLLNG*LNKWPR
Trigger: CCTTGGCCATTTATTCAGTCACCCATTCAACAAAAC...GATAGCATTAGAAGATATACCTAATGTTAATGGGTGCAGCACAGCAACGTGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAAGGCATGAGCCACTATaGCCAGCTATTTATTTATTT +
Preference number: 2 (lower is better)
Translates to: IITSLKQRTVNYACPPTPRHEPL*PAIYLF
Trigger: AAATAAATAAATAGCTGGGCATAGTGGCTCATGCCT...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR GCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAACCATACATAGATaGATGTGTGTGCCTAGAAAT +
Preference number: 2 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLLTIHR*MCVPRN
Trigger: ATTTCTAGGCACACACATGCATCTATGTATGGTTAA...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR-3UTR CCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTTGCCTAGAAATCTTCTaGAAGAAATTACTAACAGTG +
Preference number: 2 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSCLEIF*KKLLTV
Trigger: CACTGTTAGTAATTTCTTCCAGAAGATTTCTAGGCA...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR CCA 72 bp GGGGCACAGGAAGAGGGTGGAGGCAGTGGACTTAGCTaGGAAGTGGTAACAAGAGCCTCAGAAGGTGAGGGA +
Preference number: 3 (lower is better)
Translates to: GAQEEGGGSGLS*EVVTRASEGEG
Trigger: TCCCTCACCTTCTGAGGCTCTTGTTACCACTTCCCAGCTAAGTCCACTGCCTCCACCCTCTTCCTGTGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR GCA 72 bp CGAAGGCACAAGAAGGGCTGCTCCTGTCCACCACGCTaGTCATCATGGAGGAATTTGACCAACACGATGGAC +
Preference number: 3 (lower is better)
Translates to: RRHKKGCSCPPR*SSWRNLTNTMD
Trigger: GTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCTTCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
3UTR GCA 72 bp ACTGACAGCGTTAAGACTGTCAGCAGGTCTCCAGCCTaGCAGCCTACTCTGCAGAATCTGGACTTGCTAAAC +
Preference number: 3 (lower is better)
Translates to: TDSVKTVSRSPA*QPTLQNLDLLN
Trigger: GTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGACCTGCTGACAGTCTTAACGCTGTCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR GCA 72 bp GATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATaGCTGTCCTCCCACTCCATGCATTGCCCCTTGTGT +
Preference number: 3 (lower is better)
Translates to: DYNFLEAKDREL*LSSHSMHCPLC
Trigger: ACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR CCA 72 bp TCTGGACTTGCTAAACCTCCGGAATCACTAGTGTTATaGGCTGAAATATGTCCCCTTTGTCTGCTGCCCACT +
Preference number: 3 (lower is better)
Translates to: SGLAKPPESLVL*AEICPLCLLPT
Trigger: AGTGGGCAGCAGACAAAGGGGACATATTTCAGCCCATAACACTAGTGATTCCGGAGGTTTAGCAAGTCCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR TCA 72 bp ATGATCCTTGGGTCACACAGCAGACTATTAGGTGTATaGAGCTGGACTCAATGGAGAGGCAATGAAGGCAGA +
Preference number: 3 (lower is better)
Translates to: MILGSHSRLLGV*SWTQWRGNEGR
Trigger: TCTGCCTTCATTGCCTCTCCATTGAGTCCAGCTTCATACACCTAATAGTCTGCTGTGTGACCCAAGGATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
3UTR TCA 72 bp GCAGGAATTTTATGCTCTGGTTGGTTGGTACCAGGTTaGCCATGGGAATCACAACAAGTGAATAATAACCTG +
Preference number: 3 (lower is better)
Translates to: AGILCSGWLVPG*PWESQQVNNNL
Trigger: CAGGTTATTATTCACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATTCCTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAAGGCACAAGAAGGGCTaGTCCTGTCCACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPERHKKG*SCPPRC
Trigger: GCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCT...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGAAGGCACAAGAAGGGCTaGTCCTGTCCACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGRHKKG*SCPPRC
Trigger: GCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCT...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp TGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACCCTCCAGCGCTGCTCTaGAGGATGCTGTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: CSCPPRCSSWRNLTNTMDPPALL*RMLYVE
Trigger: CTCCACATACAGCATCCTGCAGAGCAGCGCTGGAGG...GTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCGGCTCGGCAGTTGGGTaGCAGGTAGAAGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPGSAVG*QVEAPQ
Trigger: CTGGGGAGCTTCTACCTGCCACCCAACTGCCGAGCC...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAAGGCCATGCAGATGGTaGAGAAGTGCCCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPERPCRW*RSAQSE
Trigger: CTCTGATTGGGCACTTCTTCACCATCTGCATGGCCT...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCGGCAGGGGAATTGCTTaGACCCGGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPGRGIA*TREVEV
Trigger: AACCTCCACCTCCCGGGTTCAAGCAATTCCCCTGCC...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACCTGCAGCCACCAGGATaGAGGCCCACAGGGGAGCCA +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHLQPPG*RPTGEP
Trigger: TGGCTCCCCTGTGGGCCTGCATCCTGGTGGCTGCAG...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGCCCAATCAGAGGGGTaGTCCCTACACTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLAQSEG*SLHSVA
Trigger: TGCCACGGAGTGTAGGGAGCACCCCTCTGATTGGGC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCGCCCAATCAGAGGGGTaGTCCCTACACTCCGTGGCA +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPAQSEG*SLHSVA
Trigger: TGCCACGGAGTGTAGGGAGCACCCCTCTGATTGGGC...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCCACGCCGCCCCACAGTaGCCAGAGGGAGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFHAAPQ*PEGAQS
Trigger: ACTCTGTGCTCCCTCTGGGCACTGTGGGGCGGCGTG...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCTTCCTTCAGGGTTCCTaGCTGGGCCAGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPFLQGS*LGQVLS
Trigger: GGAGAGCACCTGGCCCAGCCAGGAACCCTGAAGGAA...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAGCCTTTTTGTCATGCTaGATGTCTTCTGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPEAFLSC*MSSGLL
Trigger: GAGGAGCCCAGAAGACATTCAGCATGACAAAAAGGC...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTCGCTGCTCTGCAGGATaGTGTATGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: LLSTTLLIMEEFDQHDGLRCSAG*CMWRTQ
Trigger: CTGTGTCCTCCACATACAGCATCCTGCAGAGCAGCG...AAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp TGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACCAAATCCTCCAGCGCTaGTCTGCAGGATGCTGTATG +
Preference number: 4 (lower is better)
Translates to: CSCPPRCSSWRNLTNTMDQILQR*SAGCCM
Trigger: CATACAGCATCCTGCAGAGCAGCGCTGGAGGATTTG...GTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGCCTGGCTGGGCCAGGTaGTCTCCATACAGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWPGWAR*SPYSED
Trigger: GTCCTCGCTGTATGGAGAGCACCTGGCCCAGCCAGG...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACCCTGGCTGGGCCAGGTaGTCTCCATACAGCGAGGAC +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHPGWAR*SPYSED
Trigger: GTCCTCGCTGTATGGAGAGCACCTGGCCCAGCCAGG...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCGAGGACCAGCCACTCTaGCTCCTGTTGGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPEDQPL*LLLVCL
Trigger: CAGACAGACCAACAGGAGGCAGAGTGGCTGGTCCTC...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGAGGACCAGCCACTCTaGCTCCTGTTGGTCTGTCTG +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLEDQPL*LLLVCL
Trigger: CAGACAGACCAACAGGAGGCAGAGTGGCTGGTCCTC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTCAGGGTTCCTGGCTaGGCCAGGTGCTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLFRVPG*ARCSPY
Trigger: GTATGGAGAGCACCTGGCCCAGCCAGGAACCCTGAA...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCTTCAGGGTTCCTGGCTaGGCCAGGTGCTCTCCATAC +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPFRVPG*ARCSPY
Trigger: GTATGGAGAGCACCTGGCCCAGCCAGGAACCCTGAA...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTTTCCTTCAGGGTTCCTaGCTGGGCCAGGTGCTCTCC +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSFLQGS*LGQVLS
Trigger: GGAGAGCACCTGGCCCAGCCAGGAACCCTGAAGGAA...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCCGGGCTGGAGTGCAATaGCACGATCTCGGCTCACCG +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFRAGVQ*HDLGSP
Trigger: CGGTGAGCCGAGATCGTGCCATTGCACTCCAGCCCG...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGAGCCTTTTTGTCATGCTaGATGTCTTCTGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGAFLSC*MSSGLL
Trigger: GAGGAGCCCAGAAGACATTCAGCATGACAAAAAGGC...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR TCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATGATGGCAAGCTAAGGTaGCATCAGGACCGTGATGCC +
Preference number: 4 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDDGKLR*HQDRDA
Trigger: GGCATCACGGTCCTGATGTCACCTTAGCTTGCCATC...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGAGAGAGACCCCACAGTaGGGAGTTCACCTCAGGCCT +
Preference number: 4 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKRETPQ*GVHLRP
Trigger: AGGCCTGAGGTGAACTCCTCACTGTGGGGTCTCTCT...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTCCTCCAGCGCTGCTCTaGAGGATGCTGTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSPPALL*RMLYVE
Trigger: CTCCACATACAGCATCCTGCAGAGCAGCGCTGGAGG...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGATCCTGTCCACCACGCTaGTCATCATGGAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGSCPPR*SSWRNL
Trigger: CAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp TGCCACGTTGCTGTGCTGCACCCATTAACATTAGGTATATCTTCTAATGCTATCCACGCCGCCCCACAGTaGCCAGAGGGAGCACAGAGT +
Preference number: 4 (lower is better)
Translates to: CHVAVLHPLTLGISSNAIHAAPQ*PEGAQS
Trigger: ACTCTGTGCTCCCTCTGGGCACTGTGGGGCGGCGTG...GATAGCATTAGAAGATATACCTAATGTTAATGGGTGCAGCACAGCAACGTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCATTGCCCGGGCTGGAGTaGAATGGCACGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPLPGLE*NGTISA
Trigger: AGCCGAGATCGTGCCATTGCACTCCAGCCCGGGCAA...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGAATGCTGAATGTCTTCTaGGCTCCTCAGAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGMLNVF*APQKGQ
Trigger: CTGGCCTTTCTGAGGAGCCCAGAAGACATTCAGCAT...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAACACTCCGTGGCACCTaGTTGGACATGTTGACCCTG +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLTLRGT*LDMLTL
Trigger: CAGGGTCAACATGTCCAACCAGGTGCCACGGAGTGT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp TGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACCCACGCTGCTCATCATaGAGGAATTTGACCAACACG +
Preference number: 4 (lower is better)
Translates to: CSCPPRCSSWRNLTNTMDPRCSS*RNLTNT
Trigger: CGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGG...GTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAAGAAGCCTTGGCACCTaGGTTCTCTCCAGTGGGGAT +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLRSLGT*VLSSGD
Trigger: ATCCCCACTGGAGAGAACCCAGGTGCCAAGGCTTCT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAGAATTGATGCCGTCATaGAATCCCTTAACTTCTCCC +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPEELMPS*NPLTSP
Trigger: GGGAGAAGTTAAGGGATTTCATGACGGCATCAATTC...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAAACCTCCCAAGTAGCTaGGAGTACAGGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLNLPSS*EYRHEP
Trigger: TGGCTCATGCCTGTACTCTCAGCTACTTGGGAGGTT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTGTGGGGATGCACTGCTaGAGGGGCACAGGAAGAGGG +
Preference number: 4 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSVGMHC*RGTGRG
Trigger: CCCTCTTCCTGTGCCCCTTCAGCAGTGCATCCCCAC...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCTGCACTCCAATCTGGTaGCAGAGCAAGACTCTGCCT +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPCTPIW*QSKTLP
Trigger: AGGCAGAGTCTTGCTCTGTCACCAGATTGGAGTGCA...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATACCGTGATGCCTAACTaGGCACGTCAAAGCAGAGGA +
Preference number: 4 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDTVMPN*ARQSRG
Trigger: TCCTCTGCTTTGACGTGCTCAGTTAGGCATCACGGT...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCCCTCCAGCGCTGCTCTaGAGGATGCTGTATGTGGAG +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFPPALL*RMLYVE
Trigger: CTCCACATACAGCATCCTGCAGAGCAGCGCTGGAGG...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCAGGCACAAGAAGGGCTaGTCCTGTCCACCACGCTGC +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFRHKKG*SCPPRC
Trigger: GCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCGCAATCATGGCTCACTaGAGCCTTGAAATCCTGGGC +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPAIMAH*SLEILG
Trigger: GCCCAGGATTTCAAGGCTGCAGTGAGCCATGATTGC...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCAAGGACCGTGAACTATaGCTGTCCTCCCACTCCATG +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPKDREL*LSSHSM
Trigger: CATGGAGTGGGAGGACAGGCATAGTTCACGGTCCTT...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGCCACCCACCCTGTTTaGACCTTGATCTTAGGCTTC +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLATHPV*TLILGF
Trigger: GAAGCCTAAGATCAAGGTGCAAACAGGGTGGGTGGC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCAAGAAGTCAGCAACCTaGAAGCCAAGGACAGGGCTC +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPKKSAT*KPRTGL
Trigger: GAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTT...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGGGTCCAGGTAGACTGTaGTGGCCTTGGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLGPGRL*WPWSSC
Trigger: ACAACTGGACCAAGGCCACCACAGTCTACCTGGACC...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAGGCAGGGCTGGAAGATaGAGCTATCTTACACTTTTT +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPEGRAGR*SYLTLF
Trigger: AAAAAGTGTAAGATAGCTCCATCTTCCAGCCCTGCC...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCACTCACAGAGGTCCCCTaGCTAGGTAATGGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPLTEVP*LGNGRA
Trigger: GGCTCTGCCATTACCTAGCCAGGGGACCTCTGTGAG...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCTTCACAGCCAGCTGGTaGGGCCTTTGGCAAATGCTT +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPFTASW*GLWQML
Trigger: AAGCATTTGCCAAAGGCCCCACCAGCTGGCTGTGAA...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR TCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCTCTCCGTTTGCCAGTTaGTGCTATCCTTACTGGTGC +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPSPFAS*CYPYWC
Trigger: GCACCAGTAAGGATAGCATCAACTGGCAAACGGAGA...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp TGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACCTCAATGGTCCCAGATaGGTTCACATAAACATAGGG +
Preference number: 4 (lower is better)
Translates to: CSCPPRCSSWRNLTNTMDLNGPR*VHINIG
Trigger: CCCTATGTTTATGTGAACTCATCTGGGACCATTGAG...GTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR TCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACGTGACATCAGGACCGTaGTGCCTAACTGAGCACGTC +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHVTSGP*CLTEHV
Trigger: GACGTGCTCAGTTAGGCATCACGGTCCTGATGTCAC...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp CTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTAGGCCATGCAGATGGTaGAGAAGTGCCATTAAACTG +
Preference number: 4 (lower is better)
Translates to: LLSTTLLIMEEFDQHDGLRPCRW*RSAIKL
Trigger: CAGTTTAATGGCACTTCTTCACCATCTGCATGGCCT...AAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAACCCAAAAAGGAGAAATaGAAACTTGCCTACCAGATG +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPEPKKEK*KLAYQM
Trigger: CATCTGGTAGGCAAGTTTGCATTTCTCCTTTTTGGG...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTCATATGTCTCTAAACTaGACGCAGAGACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: LLSTTLLIMEEFDQHDGLHMSLN*TQRPPG
Trigger: TCCAGGTGGTCTCTGCGTGCAGTTTAGAGACATATG...AAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGAACGTCTTCCACTGTATaGAGAATGCTCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGTSSTV*RMLLKV
Trigger: GACCTTCAAGAGCATTCTGCATACAGTGGAAGACGT...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGCAAATCCTCCAGCGCTaGTCTGCAGGATGCTGTATG +
Preference number: 4 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKQILQR*SAGCCM
Trigger: CATACAGCATCCTGCAGAGCAGCGCTGGAGGATTTG...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTCAAATCCTCCAGCGCTaGTCTGCAGGATGCTGTATG +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSQILQR*SAGCCM
Trigger: CATACAGCATCCTGCAGAGCAGCGCTGGAGGATTTG...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCTCCTGTCCACCACGCTaGTCATCATGGAGGAATTTG +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPSCPPR*SSWRNL
Trigger: CAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp CTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTCAGAGACCACCTGGATaGGCTTATAGTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: LLSTTLLIMEEFDQHDGLQRPPG*AYSSQW
Trigger: CCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTG...AAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAGTCAGGCTGCAATTCTaGACATCAAATGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: VSSLPAYSAESGLAKPPEVRLQF*TSNGKA
Trigger: TGCTTTTCCATTTGATGTCCAGAATTGCAGCCTGAC...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGACACTCCGTGGCACCTaGTTGGACATGTTGACCCTG +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWTLRGT*LDMLTL
Trigger: CAGGGTCAACATGTCCAACCAGGTGCCACGGAGTGT...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCGCTCCCTACACTCCGTaGCACCTGGTTGGACATGTT +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFAPYTP*HLVGHV
Trigger: AACATGTCCAACCAGGTGCCACGGAGTGTAGGGAGC...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCCACGCTGCTCATCATaGAGGAATTTGACCAACACG +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPPRCSS*RNLTNT
Trigger: CGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGG...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAGTTACCACAGCACGTTaGGCCCTGGGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPVTTAR*ALGSTL
Trigger: TAGAGTGGAACCCAGGGCCCAACGTGCTGTGGTAAC...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACGTTACCACAGCACGTTaGGCCCTGGGTTCCACTCTA +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHVTTAR*ALGSTL
Trigger: TAGAGTGGAACCCAGGGCCCAACGTGCTGTGGTAAC...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGGGCAGTGGACTTAGCTaGGAAGTGGTAACAAGAGCC +
Preference number: 4 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLGSGLS*EVVTRA
Trigger: GGCTCTTGTTACCACTTCCCAGCTAAGTCCACTGCC...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTCAATTCACAGCCAGCTaGTGGGGCCTTTGGCAAATG +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSQFTAS*WGLWQM
Trigger: CATTTGCCAAAGGCCCCACCAGCTGGCTGTGAATTG...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR TCA 90 bp CTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTTATGCAGAATGCTCTTaGAGGTCAGGCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: LLSTTLLIMEEFDQHDGLYAECS*RSGCNS
Trigger: AGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATA...AAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR TCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGGCCATGCAGATGGTaGAGAAGTGCCCAATCAGAG +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFRPCRW*RSAQSE
Trigger: CTCTGATTGGGCACTTCTTCACCATCTGCATGGCCT...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCGGAGAAATGCAAACTTaGCTACCAGATGGAATGCCG +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPGEMQT*LPDGMP
Trigger: CGGCATTCCATCTGGTAGGCAAGTTTGCATTTCTCC...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTACATATGTCTCTAAACTaGACGCAGAGACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLHMSLN*TQRPPG
Trigger: TCCAGGTGGTCTCTGCGTGCAGTTTAGAGACATATG...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCGCTGCTCTGCAGGATaGTGTATGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFRCSAG*CMWRTQ
Trigger: CTGTGTCCTCCACATACAGCATCCTGCAGAGCAGCG...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGCAGATGGTGAAGAAGTaGCCAATCAGAGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWQMVKK*PIRGVL
Trigger: GAGCACCCCTCTGATTGGGCACTTCTTCACCATCTG...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACCAGATGGTGAAGAAGTaGCCAATCAGAGGGGTGCTC +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHQMVKK*PIRGVL
Trigger: GAGCACCCCTCTGATTGGGCACTTCTTCACCATCTG...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTTCTCTCCAGTGGGGATaGACTGCTGAAGGGGCACAG +
Preference number: 4 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSSLQWG*TAEGAQ
Trigger: CTGTGCCCCTTCAGCAGTGCATCCCCACTGGAGAGA...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCGGTCCAGGTAGACTGTaGTGGCCTTGGTCCAGTTGT +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFGPGRL*WPWSSC
Trigger: ACAACTGGACCAAGGCCACCACAGTCTACCTGGACC...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCAGAGACCACCTGGATaGGCTTATAGTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPQRPPG*AYSSQW
Trigger: CCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTG...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCCAGAGACCACCTGGATaGGCTTATAGTTCTCAATGG +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPQRPPG*AYSSQW
Trigger: CCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTG...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTATGCTGAATGTCTTCTaGGCTCCTCAGAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSMLNVF*APQKGQ
Trigger: CTGGCCTTTCTGAGGAGCCCAGAAGACATTCAGCAT...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCGCTCCCTACACTCCGTaGCACCTGGTTGGACATGTT +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFAPYTP*HLVGHV
Trigger: AACATGTCCAACCAGGTGCCACGGAGTGTAGGGAGC...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTGGCCAAGGCAGGGCTaGAAGATGGAGCTATCTTAC +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFWPRQG*KMELSY
Trigger: GTAAGATAGCTCCATCTTCCAGCCCTGCCTTGGCCA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAGCGCTGAGCACTAACTaGGAGGTAATGAGAGAGGGA +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPALSTN*EVMREG
Trigger: TCCCTCTCTCATTACCTCCCAGTTAGTGCTCAGCGC...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATAGCAGTGGAATTTCATaGACAATTGGCGCTGAGCAC +
Preference number: 4 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDSSGIS*TIGAEH
Trigger: GTGCTCAGCGCCAATTGTCCATGAAATTCCACTGCT...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATAACTGGAGGAGGAAGTaGAGAAAGCCAGAATCGACA +
Preference number: 4 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDNWRRK*RKPEST
Trigger: TGTCGATTCTGGCTTTCTCCACTTCCTCCTCCAGTT...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCGGGAGCCATTACACTTaGCAACATTCCTGGGCAGAT +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFGSHYT*QHSWAD
Trigger: ATCTGCCCAGGAATGTTGTCAAGTGTAATGGCTCCC...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACGCCTTTTTGTCATGCTaGATGTCTTCTGGGCTCCTC +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHAFLSC*MSSGLL
Trigger: GAGGAGCCCAGAAGACATTCAGCATGACAAAAAGGC...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATGTAGATCCCCAGCATaGAAAGGTAGCTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLCRSPA*KGSFGR
Trigger: TCTTCCAAAGCTACCTTTTCATGCTGGGGATCTACA...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGCATATGTCTCTAAACTaGACGCAGAGACCACCTGGA +
Preference number: 4 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLHMSLN*TQRPPG
Trigger: TCCAGGTGGTCTCTGCGTGCAGTTTAGAGACATATG...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCACGTCTTCCACTGTATaGAGAATGCTCTTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPTSSTV*RMLLKV
Trigger: GACCTTCAAGAGCATTCTGCATACAGTGGAAGACGT...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp TGCCACGTTGCTGTGCTGCACCCATTAACATTAGGTATATCTTCTAATGCTATCCGCTGCTCTGCAGGATaGTGTATGTGGAGGACACAG +
Preference number: 4 (lower is better)
Translates to: CHVAVLHPLTLGISSNAIRCSAG*CMWRTQ
Trigger: CTGTGTCCTCCACATACAGCATCCTGCAGAGCAGCG...GATAGCATTAGAAGATATACCTAATGTTAATGGGTGCAGCACAGCAACGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp CTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTATTAAACTGAATCTGTaGAAATCCTCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: LLSTTLLIMEEFDQHDGLIKLNL*KSSSAA
Trigger: AGCAGCGCTGGAGGATTTGCACAGATTCAGTTTAAT...AAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTACAGCTCACCAAAATCTaGATCAATTCACAGCCAGCT +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLQLTKI*INSQPA
Trigger: AGCTGGCTGTGAATTGATGCAGATTTTGGTGAGCTG...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAAACTTGCCTACCAGATaGAATGCCGCTCAATTTCTC +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLNLPTR*NAAQFL
Trigger: GAGAAATTGAGCGGCATTCCATCTGGTAGGCAAGTT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGACTGTGGTGGCCTTaGTCCAGTTGTAAACAGGTC +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFRLWWP*SSCKQV
Trigger: GACCTGTTTACAACTGGACCAAGGCCACCACAGTCT...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACATGCTGAATGTCTTCTaGGCTCCTCAGAAAGGCCAG +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHMLNVF*APQKGQ
Trigger: CTGGCCTTTCTGAGGAGCCCAGAAGACATTCAGCAT...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCACCACGCTGCTCATCATaGAGGAATTTGACCAACACG +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPPRCSS*RNLTNT
Trigger: CGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGG...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCAAGAGGTCACTAGGATaGACCCTAAACCAACAACAC +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPKRSLG*TLNQQH
Trigger: GTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTT...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCGTAATAGCTGCTTGCTaGGATGATACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPVIAAC*DDTEQN
Trigger: ATTCTGCTCTGTATCATCTCAGCAAGCAGCTATTAC...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGCTCAATGGTCCCAGATaGGTTCACATAAACATAGGG +
Preference number: 4 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKLNGPR*VHINIG
Trigger: CCCTATGTTTATGTGAACTCATCTGGGACCATTGAG...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTCTCAATGGTCCCAGATaGGTTCACATAAACATAGGG +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSLNGPR*VHINIG
Trigger: CCCTATGTTTATGTGAACTCATCTGGGACCATTGAG...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATGCCAGCACAATTACTaGAGAACACTTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLCQHNY*RTLQSS
Trigger: TGAAGACTGAAGTGTTCTTCAGTAATTGTGCTGGCA...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCAGACTATTAGGTGTATaGAGCTGGACTCAATGGAGA +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPRLLGV*SWTQWR
Trigger: TCTCCATTGAGTCCAGCTTCATACACCTAATAGTCT...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATGTTTTGTTGAATGGGTaGCTGAATAAATGGCCAAGG +
Preference number: 4 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDVLLNG*LNKWPR
Trigger: CCTTGGCCATTTATTCAGTCACCCATTCAACAAAAC...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp TCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTAGAAGTGCCATTAAACTaGATCTGTGCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: SCPPRCSSWRNLTNTMDLEVPLN*ICANPP
Trigger: TGGAGGATTTGCACAGATTCAGTTTAATGGCACTTC...TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR GCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCGCCTACCAGATGGAATaGCGCTCAATTTCTCCTAAC +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFAYQME*RSISPN
Trigger: GTTAGGAGAAATTGAGCGGCATTCCATCTGGTAGGC...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCATGGCAGGAATTTTATaGTCTGGTTGGTTGGTACCA +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPMAGIL*SGWLVP
Trigger: TGGTACCAACCAACCAGAGCATAAAATTCCTGCCAT...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGCTTAACTTCTCCCTTTaGTTCTGCCCCAAGATCAGA +
Preference number: 4 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKLNFSL*FCPKIR
Trigger: TCTGATCTTGGGGCAGAACCAAAGGGAGAAGTTAAG...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTTGTAAACACTCAGTaGGACCAAAGGCAATACCAG +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLFVNTQ*DQRQYQ
Trigger: CTGGTATTGCCTTTGGTCCCACTGAGTGTTTACAAA...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTGATGATGTGTATCTGTaGCTAGAATTCCTGCAGCCA +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSDDVYL*LEFLQP
Trigger: TGGCTGCAGGAATTCTAGCCACAGATACACATCATC...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTAGTCAGGCTGCAATTCTaGACATCAAATGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: SCPPRCSSWRNLTNTMDLVRLQF*TSNGKA
Trigger: TGCTTTTCCATTTGATGTCCAGAATTGCAGCCTGAC...TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCTATGCTCTGGTTGGTTaGTACCAGGTTGACCATGGG +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFYALVG*YQVDHG
Trigger: CCCATGGTCAACCTGGTACCAACCAACCAGAGCATA...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCCGCCATCTCCAAGGTTaGAAAACTGTACCTACAATT +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPRHLQG*KTVPTI
Trigger: AATTGTAGGTACAGTTTTCCAACCTTGGAGATGGCG...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR TCA 90 bp TGCCACGTTGCTGTGCTGCACCCATTAACATTAGGTATATCTTCTAATGCTATCGCAGAATCCTGGGGATaGTGTGTATCTGTGGCTAGA +
Preference number: 4 (lower is better)
Translates to: CHVAVLHPLTLGISSNAIAESWG*CVSVAR
Trigger: TCTAGCCACAGATACACATCATCCCCAGGATTCTGC...GATAGCATTAGAAGATATACCTAATGTTAATGGGTGCAGCACAGCAACGTGGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTATGCAGAATGCTCTTaGAGGTCAGGCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFYAECS*RSGCNS
Trigger: AGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCATCACCACATTAAACTaGATCTGTGCAAATCCTCCA +
Preference number: 4 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPITTLN*ICANPP
Trigger: TGGAGGATTTGCACAGATTCAGTTTAATGTGGTGAT...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTGTAGATCCCCAGCATaGAAAGGTAGCTTTGGAAGA +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFCRSPA*KGSFGR
Trigger: TCTTCCAAAGCTACCTTTTCATGCTGGGGATCTACA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCTGGTTGGTACCAGGTTaGCCATGGGAATCACAACAA +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFWLVPG*PWESQQ
Trigger: TTGTTGTGATTCCCATGGTCAACCTGGTACCAACCA...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGTGTGTGTGGACTAAATaGTGTGCTAGACTGGGCTTA +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWCVWTK*CARLGL
Trigger: TAAGCCCAGTCTAGCACATCATTTAGTCCACACACA...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGTCCTCCTTCTCCGTTTaGCAGTTGATGCTATCCTTA +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWSSFSV*QLMLSL
Trigger: TAAGGATAGCATCAACTGGCAAACGGAGAAGGAGGA...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTATTAAACTGAATCTGTaGAAATCCTCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSIKLNL*KSSSAA
Trigger: AGCAGCGCTGGAGGATTTGCACAGATTCAGTTTAAT...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGAAACAGGTGGAGGTTTaGATGGACACTTCCTGTTCA +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWKQVEV*MDTSCS
Trigger: TGAACAGGAAGTGTCCATGCAAACCTCCACCTGTTT...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTATCATTCCAGACCTCTTaGTACCATACACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: SCPPRCSSWRNLTNTMDLSFQTS*YHTLVF
Trigger: AAAGACAAGTGTATGGTACCAAGAGGTCTGGAATGA...TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAGTTGCTTTGGGTGAGTaGACTGGGATAAGAAGGAAA +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPVALGE*TGIRRK
Trigger: TTTCCTTCTTATCCCAGTCCACTCACCCAAAGCAAC...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTCAAATGTTTTGGAATTaGTGCCGTCATGAAATCCCT +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSQMFWN*CRHEIP
Trigger: AGGGATTTCATGACGGCATCAATTCCAAAACATTTG...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGGTCTCACTTCTTTATaGTATTTCTGTAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLGLTSL*YFCNSC
Trigger: GCAGCTATTACAGAAATATCATAAAGAAGTGAGACC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTGCCAGCACAATTACTaGAGAACACTTCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHCQHNY*RTLQSS
Trigger: TGAAGACTGAAGTGTTCTTCAGTAATTGTGCTGGCA...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCATCAATGGAGAGGCAATaGAGGCAGAAAGCCTTTTAT +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPSMERQ*RQKAFY
Trigger: ATAAAAGGCTTTCTGCCTTCATTGCCTCTCCATTGA...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTGTAGTATTTCCTAGCTaGCTAGTTCAGGGACAGTGG +
Preference number: 4 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSVVFPS*LVQGQW
Trigger: CCACTGTCCCTGAACTAGTCAGCTAGGAAATACTAC...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCATGCTTAAAGTAAGCTaGTGGCCTAAGTGCCCAATG +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFMLKVS*WPKCPM
Trigger: CATTGGGCACTTAGGCCATCAGCTTACTTTAAGCAT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR CCA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTTCATTCCAGACCTCTTaGTACCATACACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: FPLLSLLSASTITEEHFSSFQTS*YHTLVF
Trigger: AAAGACAAGTGTATGGTACCAAGAGGTCTGGAATGA...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACGTCAGGCTGCAATTCTaGACATCAAATGGAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHVRLQF*TSNGKA
Trigger: TGCTTTTCCATTTGATGTCCAGAATTGCAGCCTGAC...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGCTAGTTCAGGGACAGTaGATTATAACTTCCTTGAAG +
Preference number: 4 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKLVQGQ*IITSLK
Trigger: CTTCAAGGAAGTTATAATCCACTGTCCCTGAACTAG...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACGGCCTAAGTGCCCAATaGAGAAACCTCATTGTAAAA +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHGLSAQ*RNLIVK
Trigger: TTTTACAATGAGGTTTCTCCATTGGGCACTTAGGCC...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGATGATGTGTATCTGTaGCTAGAATTCCTGGAAAAT +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLDDVYL*LEFLEN
Trigger: ATTTTCCAGGAATTCTAGCCACAGATACACATCATC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR TCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCGTAATAGCTGCTTGCTaGGATGATACAGAGCAGAAT +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFVIAAC*DDTEQN
Trigger: ATTCTGCTCTGTATCATCTCAGCAAGCAGCTATTAC...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR TCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTTATGCAGAATGCTCTTaGAGGTCAGGCTGCAATTCT +
Preference number: 4 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSYAECS*RSGCNS
Trigger: AGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATA...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACATTTTCATGAACATATaGTCCTTGGGTCACACAGCA +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHIFMNI*SLGHTA
Trigger: TGCTGTGTGACCCAAGGATCATATGTTCATGAAAAT...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR TCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCTAGTACTCAGAATATaGCTGTTTGAACATAGGGCC +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFLVLRI*LFEHRA
Trigger: GGCCCTATGTTCAAACAGTCATATTCTGAGTACTAG...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCATTAAACTGAATCTGTaGAAATCCTCCAGCGCTGCT +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFIKLNL*KSSSAA
Trigger: AGCAGCGCTGGAGGATTTGCACAGATTCAGTTTAAT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR GCA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAATAGATGCATGTGTGTaGCTAGAAATCTTCTGGAAG +
Preference number: 4 (lower is better)
Translates to: IITSLKQRTVNYACPPTPIDACV*LEIFWK
Trigger: CTTCCAGAAGATTTCTAGGCACACACATGCATCTAT...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTCATTCCAGACCTCTTaGTACCATACACTTGTCTTT +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFSFQTS*YHTLVF
Trigger: AAAGACAAGTGTATGGTACCAAGAGGTCTGGAATGA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATCTCATCAAACATGCTaGAGTTCCAGGATAAAAATT +
Preference number: 4 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLSHQTC*SSRIKI
Trigger: AATTTTTATCCTGGAACTCCAGCATGTTTGATGAGA...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp TCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTATCTCATCAAACATGCTaGAGTTCCAGGATAAAAATT +
Preference number: 4 (lower is better)
Translates to: SCPPRCSSWRNLTNTMDLSHQTC*SSRIKI
Trigger: AATTTTTATCCTGGAACTCCAGCATGTTTGATGAGA...TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCAGGAATTTTATGCTCTaGTTGGTTGGTACCAGGTTG +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFRNFML*LVGTRL
Trigger: CAACCTGGTACCAACCAACCAGAGCATAAAATTCCT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTAGGTGGAGGTTTGCATaGACACTTCCTGTTCACAAA +
Preference number: 4 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSRWRFA*TLPVHK
Trigger: TTTGTGAACAGGAAGTGTCCATGCAAACCTCCACCT...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTCAGAATCGACATGGATaGCAAGCTAAGGTGACATCA +
Preference number: 4 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSQNRHG*QAKVTS
Trigger: TGATGTCACCTTAGCTTGCCATCCATGTCGATTCTG...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCTGTTCAGGACTCGGTaGCTTTTACTAGAATATAGC +
Preference number: 4 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFLFRTR*LLLEYS
Trigger: GCTATATTCTAGTAAAAGCCACCGAGTCCTGAACAG...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS-3UTR TCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGGGTCTCACTTCTTTATaGTATTTCTGTAATAGCTGC +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWGLTSL*YFCNSC
Trigger: GCAGCTATTACAGAAATATCATAAAGAAGTGAGACC...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTGCTATCCTTACTGGTaGTATTTTGTAAACACTCAG +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFCYPYW*YFVNTQ
Trigger: CTGAGTGTTTACAAAATAGCACCAGTAAGGATAGCA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGAGGCATGAGCCACTATaGCCAGCTATTTATTTATTT +
Preference number: 4 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWRHEPL*PAIYLF
Trigger: AAATAAATAAATAGCTGGGCATAGTGGCTCATGCCT...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR GCA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTTAACCATACATAGATaGATGTGTGTGCCTAGAAAT +
Preference number: 4 (lower is better)
Translates to: LFPLLSLLSASTITEEHFLTIHR*MCVPRN
Trigger: ATTTCTAGGCACACACATGCATCTATGTATGGTTAA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTCTCATCAAACATGCTaGAGTTCCAGGATAAAAATT +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHSHQTC*SSRIKI
Trigger: AATTTTTATCCTGGAACTCCAGCATGTTTGATGAGA...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CCA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTGCCTAGAAATCTTCTaGAAGAAATTACTAACAGTG +
Preference number: 4 (lower is better)
Translates to: LLFPLLSLLSASTITEEHCLEIF*KKLLTV
Trigger: CACTGTTAGTAATTTCTTCCAGAAGATTTCTAGGCA...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS GCA 90 bp CTAGGCCTGTCAGCATCGGTGTCCCCTCGAAGGCACAAGAAGGGCTaGTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAAC +
Preference number: 5 (lower is better)
Translates to: LGLSASVSPRRHKKG*SCPPRCSSWRNLTN
Trigger: GTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCTTCGAGGGGACACCGATGCTGACAGGCCTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CCA 90 bp GATGGTGAAGAAGTGCCCAATCAGAGGGGTGCTCCCTACACTCCGTaGCACCTGGTTGGACATGTTGACCCTGAAGACGGTGTAGCCCAC +
Preference number: 5 (lower is better)
Translates to: DGEEVPNQRGAPYTP*HLVGHVDPEDGVAH
Trigger: GTGGGCTACACCGTCTTCAGGGTCAACATGTCCAACCAGGTGCCACGGAGTGTAGGGAGCACCCCTCTGATTGGGCACTTCTTCACCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS GCA 90 bp TTGGAAGAGCAGTCGGTCAAAGCGGGACAGGAGGACCAGCCACTCTaGCTCCTGTTGGTCTGTCTGGTCCTGAGTTTGGAGGTAGTTGCT +
Preference number: 5 (lower is better)
Translates to: LEEQSVKAGQEDQPL*LLLVCLVLSLEVVA
Trigger: AGCAACTACCTCCAAACTCAGGACCAGACAGACCAACAGGAGGCAGAGTGGCTGGTCCTCCTGTCCCGCTTTGACCGACTGCTCTTCCAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CCA 90 bp GTTGCTGATAGATTGAAGCTGCGACCAGACTTCCTTCAGGGTTCCTaGCTGGGCCAGGTGCTCTCCATACAGCGAGGACTCTGTTACCAC +
Preference number: 5 (lower is better)
Translates to: VADRLKLRPDFLQGS*LGQVLSIQRGLCYH
Trigger: GTGGTAACAGAGTCCTCGCTGTATGGAGAGCACCTGGCCCAGCCAGGAACCCTGAAGGAAGTCTGGTCGCAGCTTCAATCTATCAGCAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS GCA 90 bp GTGTCCCCTCGAAGGCACAAGAAGGGCTGCTCCTGTCCACCACGCTaGTCATCATGGAGGAATTTGACCAACACGATGGACTTAGCTAAG +
Preference number: 5 (lower is better)
Translates to: VSPRRHKKGCSCPPR*SSWRNLTNTMDLAK
Trigger: CTTAGCTAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCTTCGAGGGGACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 90 bp CGAAGGCACAAGAAGGGCTGCTCCTGTCCACCACGCTGCTCATCATaGAGGAATTTGACCAACACGATGGACTTAGCTAAGCTGAGAACC +
Preference number: 5 (lower is better)
Translates to: RRHKKGCSCPPRCSS*RNLTNTMDLAKLRT
Trigger: GGTTCTCAGCTTAGCTAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAGCCCTTCTTGTGCCTTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS-3UTR CAA 90 bp ACTATGCCTGTCCTCCCACTCCATGCATTGCCCCTTGTGTGTGGACTAAATGATCTCCGTGGCACCTGGTaGGACATGTTGACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: TMPVLPLHALPLVCGLNDLRGTW*DMLTLK
Trigger: CTTCAGGGTCAACATGTCCAACCAGGTGCCACGGAG...ATCATTTAGTCCACACACAAGGGGCAATGCATGGAGTGGGAGGACAGGCATAGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCCCACTCTGCCTCCTGTaGGTCTGTCTGGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPPLCLL*VCLVLS
Trigger: ACTCAGGACCAGACAGACCAACAGGAGGCAGAGTGG...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
53% GC, longest homopolymer 7 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp GTCTCCAGCCTGCCAGCCTACTCTGCAGAATCTGGACTTGCTAAACCTCCGGAAGAAACAGGTGGAGGTTaGCATGGACACTTCCTGTTC +
Preference number: 5 (lower is better)
Translates to: VSSLPAYSAESGLAKPPEETGGG*HGHFLF
Trigger: GAACAGGAAGTGTCCATGCAAACCTCCACCTGTTTC...TTCCGGAGGTTTAGCAAGTCCAGATTCTGCAGAGTAGGCTGGCAGGCTGGAGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS TCA 90 bp ACTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTaGAGAACACTTCAGTCTTCACACGCCGCCCCACAGTGCCCAGAG +
Preference number: 5 (lower is better)
Translates to: TIIPPPLSPKCQHNY*RTLQSSHAAPQCPE
Trigger: CTCTGGGCACTGTGGGGCGGCGTGTGAAGACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAACCAGCACACTGGTCTaGAACACAATCCTGGCTCGG +
Preference number: 5 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLTSTLV*NTILAR
Trigger: CCGAGCCAGGATTGTGTTCAAGACCAGTGTGCTGGT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTCTCCGTGGCACCTGGTaGGACATGTTGACCCTGAAG +
Preference number: 5 (lower is better)
Translates to: FPLLSLLSASTITEEHFSLRGTW*DMLTLK
Trigger: CTTCAGGGTCAACATGTCCAACCAGGTGCCACGGAG...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGTGTTACCACAGCACGTaGGGCCCTGGGTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKCYHST*GPGFHS
Trigger: AGAGTGGAACCCAGGGCCCAACGTGCTGTGGTAACA...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp TTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCAGTTGTTACCACAGCACGTaGGGCCCTGGGTTCCACTCT +
Preference number: 5 (lower is better)
Translates to: FPLLSLLSASTITEEHFSCYHST*GPGFHS
Trigger: AGAGTGGAACCCAGGGCCCAACGTGCTGTGGTAACA...ACTGAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGCCACTCTGCCTCCTGTaGGTCTGTCTGGTCCTGAGT +
Preference number: 5 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLPLCLL*VCLVLS
Trigger: ACTCAGGACCAGACAGACCAACAGGAGGCAGAGTGG...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGGGGAGCCATTACACTaGACAACATTCCTGGGCAGA +
Preference number: 5 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLGEPLH*TTFLGR
Trigger: TCTGCCCAGGAATGTTGTCAAGTGTAATGGCTCCCC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGAGTATGCAGAATGCTCTaGAAGGTCAGGCTGCAATTC +
Preference number: 5 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGVCRML*KVRLQF
Trigger: GAATTGCAGCCTGACCTTCAAGAGCATTCTGCATAC...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CAA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAAGCCACCCACCCTGTTaGCACCTTGATCTTAGGCTT +
Preference number: 5 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLSHPPC*HLDLRL
Trigger: AAGCCTAAGATCAAGGTGCAAACAGGGTGGGTGGCT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp AGGTTAAAAGAGGTCACTAGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTGTGGTCTCACTATGTaGCTCTGGCTGGTCTCGAAC +
Preference number: 5 (lower is better)
Translates to: RLKEVTRMDPKPTTLVPLCGLTM*LWLVSN
Trigger: GTTCGAGACCAGCCAGAGCAACATAGTGAGACCACA...CAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCTAGTGACCTCTTTTAACCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACCTCCCACTCCATGCATaGCCCCTTGTGTGTGGACTA +
Preference number: 5 (lower is better)
Translates to: LLFPLLSLLSASTITEEHLPLHA*PLVCGL
Trigger: TAGTCCACACACAAGGGGCAATGCATGGAGTGGGAG...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS CCA 90 bp GAATCTGTGCAAATCCTCCAGCGCTGCTCTGCAGGATGCTGTATGTaGAGGACACAGATAGAAGTTCCCACTCACTGTCATTCAAAAACG +
Preference number: 5 (lower is better)
Translates to: ESVQILQRCSAGCCM*RTQIEVPTHCHSKT
Trigger: CGTTTTTGAATGACAGTGAGTGGGAACTTCTATCTGTGTCCTCCACATACAGCATCCTGCAGAGCAGCGCTGGAGGATTTGCACAGATTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS-3UTR CAA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAAGGAGAAATGCAAACTaGCCTACCAGATGGAATGCC +
Preference number: 5 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLRRNAN*PTRWNA
Trigger: GGCATTCCATCTGGTAGGCAAGTTTGCATTTCTCCT...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp TCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGACTTAATGTCCACAAACTCATaGATGATGATATCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: SCPPRCSSWRNLTNTMDLMSTNS*MMISGA
Trigger: GGCCCCCGATATCATCATCAATGAGTTTGTGGACAT...TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CAA 90 bp GGGACTATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTAGTATGCAGAATGCTCTaGAAGGTCAGGCTGCAATTC +
Preference number: 5 (lower is better)
Translates to: GTIGKNHHTRPRKLFNPLVCRML*KVRLQF
Trigger: GAATTGCAGCCTGACCTTCAAGAGCATTCTGCATAC...TAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTATAGTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp CTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTTGACCAACACGATGGATCATCATGGAGGAATTaGACCAACACGATGGACTTA +
Preference number: 5 (lower is better)
Translates to: LLLSTTLLIMEEFDQHDGSSWRN*TNTMDL
Trigger: TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGA...TCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000543092.1
CDS-3UTR CAA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCTGTCTGGTCCTGAGTTaGGAGGTAGTTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPCLVLS*EVVADR
Trigger: TCTATCAGCAACTACCTCCAAACTCAGGACCAGACA...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp GCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCCTTGGTTGGTACCAGGTaGACCATGGGAATCACAACA +
Preference number: 5 (lower is better)
Translates to: ARTTTPDPESFLTHYYSPLVGTR*TMGITT
Trigger: TGTTGTGATTCCCATGGTCAACCTGGTACCAACCAA...GGGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS TCA 90 bp AGAAGTTCCCACTCACTGTCATTCAAAAACGCCTTTTTGTCATGCTaGATGTCTTCTGGGCTCCTCAGAAAGGCCAGGTCTACGTCTTCC +
Preference number: 5 (lower is better)
Translates to: RSSHSLSFKNAFLSC*MSSGLLRKARSTSS
Trigger: GGAAGACGTAGACCTGGCCTTTCTGAGGAGCCCAGAAGACATTCAGCATGACAAAAAGGCGTTTTTGAATGACAGTGAGTGGGAACTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS GCA 90 bp GCAGATCCCAAAAAGGAGAAATGCAAACTTGCCTACCAGATGGAATaGCGCTCAATTTCTCCTAACAGGGTTCCTCTCCACTCTGTTCTC +
Preference number: 5 (lower is better)
Translates to: ADPKKEKCKLAYQME*RSISPNRVPLHSVL
Trigger: GAGAACAGAGTGGAGAGGAACCCTGTTAGGAGAAATTGAGCGGCATTCCATCTGGTAGGCAAGTTTGCATTTCTCCTTTTTGGGATCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS CCA 90 bp CTAAACTGCACGCAGAGACCACCTGGATGGGCTTATAGTTCTCAATaGTCCCAGATGAGTTCACATAAACATAGGGAAGGTCAGGGTATC +
Preference number: 5 (lower is better)
Translates to: LNCTQRPPGWAYSSQ*SQMSSHKHREGQGI
Trigger: GATACCCTGACCTTCCCTATGTTTATGTGAACTCATCTGGGACCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTGCGTGCAGTTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 90 bp CTCACTGTCATTCAAAAACGCCTTTTTGTCATGCTGAATGTCTTCTaGGCTCCTCAGAAAGGCCAGGTCTACGTCTTCCACTGTATGCAG +
Preference number: 5 (lower is better)
Translates to: LTVIQKRLFVMLNVF*APQKGQVYVFHCMQ
Trigger: CTGCATACAGTGGAAGACGTAGACCTGGCCTTTCTGAGGAGCCCAGAAGACATTCAGCATGACAAAAAGGCGTTTTTGAATGACAGTGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS-3UTR CAA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGTTCTCCGTTTGCCAGTaGATGCTATCCTTACTGGTG +
Preference number: 5 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKFSVCQ*MLSLLV
Trigger: CACCAGTAAGGATAGCATCAACTGGCAAACGGAGAA...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACCTCCTCCTTCTCCGTTaGCCAGTTGATGCTATCCTT +
Preference number: 5 (lower is better)
Translates to: LLFPLLSLLSASTITEEHLLLLR*PVDAIL
Trigger: AAGGATAGCATCAACTGGCAAACGGAGAAGGAGGAG...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGGTATGCAGAATGCTCTaGAAGGTCAGGCTGCAATTC +
Preference number: 5 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKVCRML*KVRLQF
Trigger: GAATTGCAGCCTGACCTTCAAGAGCATTCTGCATAC...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp TGCCACGTTGCTGTGCTGCACCCATTAACATTAGGTATATCTTCTAATGCTATCACCAGCACACTGGTCTaGAACACAATCCTGGCTCGG +
Preference number: 5 (lower is better)
Translates to: CHVAVLHPLTLGISSNAITSTLV*NTILAR
Trigger: CCGAGCCAGGATTGTGTTCAAGACCAGTGTGCTGGT...GATAGCATTAGAAGATATACCTAATGTTAATGGGTGCAGCACAGCAACGTGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp AAACAAAGCAAGAAGTCAGCAACCTGCAAGCCAAGGACAGGGCTCAGAAGAAAGGTAGTTGCTGATAGATaGAAGCTGCGACCAGACTTC +
Preference number: 5 (lower is better)
Translates to: KQSKKSATCKPRTGLRRKVVADR*KLRPDF
Trigger: GAAGTCTGGTCGCAGCTTCAATCTATCAGCAACTAC...CTTTCTTCTGAGCCCTGTCCTTGGCTTGCAGGTTGCTGACTTCTTGCTTTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS TCA 90 bp CGCAGAGACCACCTGGATGGGCTTATAGTTCTCAATGGTCCCAGATaGGTTCACATAAACATAGGGAAGGTCAGGGTATCTTTCAATGTC +
Preference number: 5 (lower is better)
Translates to: RRDHLDGLIVLNGPR*VHINIGKVRVSFNV
Trigger: GACATTGAAAGATACCCTGACCTTCCCTATGTTTATGTGAACTCATCTGGGACCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTGCG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS-3UTR CAA 90 bp ATTATAACTTCCTTGAAGCAAAGGACCGTGAACTATGCCTGTCCTCCCACTCCAATGTCCACAAACTCATaGATGATGATATCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: IITSLKQRTVNYACPPTPMSTNS*MMISGA
Trigger: GGCCCCCGATATCATCATCAATGAGTTTGTGGACAT...TGGAGTGGGAGGACAGGCATAGTTCACGGTCCTTTGCTTCAAGGAAGTTATAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCATGTCCACAAACTCATaGATGATGATATCGGGGGCC +
Preference number: 5 (lower is better)
Translates to: LFPLLSLLSASTITEEHFMSTNS*MMISGA
Trigger: GGCCCCCGATATCATCATCAATGAGTTTGTGGACAT...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCGTAGTTGCTGATAGATaGAAGCTGCGACCAGACTTC +
Preference number: 5 (lower is better)
Translates to: LFPLLSLLSASTITEEHFVVADR*KLRPDF
Trigger: GAAGTCTGGTCGCAGCTTCAATCTATCAGCAACTAC...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTGTCTGGTCCTGAGTTaGGAGGTAGTTGCTGATAGA +
Preference number: 5 (lower is better)
Translates to: LLFPLLSLLSASTITEEHCLVLS*EVVADR
Trigger: TCTATCAGCAACTACCTCCAAACTCAGGACCAGACA...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp GGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCCCCTGGATTATAACTTCCTaGAAGCAAAGGACCGTGAAC +
Preference number: 5 (lower is better)
Translates to: GKNHHTRPRKLFNPLLFPWIITS*KQRTVN
Trigger: GTTCACGGTCCTTTGCTTCAAGGAAGTTATAATCCA...GGGGAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp AGGATGGACCCTAAACCAACAACACTGGTGCCCTTGTTAGAAGAGAAAATCTGGGAATTTCATGGACAATaGGCGCTGAGCACTAACTGG +
Preference number: 5 (lower is better)
Translates to: RMDPKPTTLVPLLEEKIWEFHGQ*ALSTNW
Trigger: CCAGTTAGTGCTCAGCGCCAATTGTCCATGAAATTC...CCAGATTTTCTCTTCTAACAAGGGCACCAGTGTTGTTGGTTTAGGGTCCATCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS TCA 90 bp AGGCAATACCAGCACCATGCAAATGTTTTGGAATTGATGCCGTCATaGAATCCCTTAACTTCTCCCTTTGGTTCTGCCCCAAGATCAGAC +
Preference number: 5 (lower is better)
Translates to: RQYQHHANVLELMPS*NPLTSPFGSAPRSD
Trigger: GTCTGATCTTGGGGCAGAACCAAAGGGAGAAGTTAAGGGATTTCATGACGGCATCAATTCCAAAACATTTGCATGGTGCTGGTATTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp CTATTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACACAGCTTTTGGACTTTaGTGTCTTCTACTGACAGCG +
Preference number: 5 (lower is better)
Translates to: LLFPLLSLLSASTITEEHTAFGL*CLLLTA
Trigger: CGCTGTCAGTAGAAGACACAAAAGTCCAAAAGCTGT...GTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAATAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS CCA 90 bp TCTTCCACTGTATGCAGAATGCTCTTGAAGGTCAGGCTGCAATTCTaGACATCAAATGGAAAAGCATATGTCTCTAAACTGCACGCAGAG +
Preference number: 5 (lower is better)
Translates to: SSTVCRMLLKVRLQF*TSNGKAYVSKLHAE
Trigger: CTCTGCGTGCAGTTTAGAGACATATGCTTTTCCATTTGATGTCCAGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATACAGTGGAAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS-3UTR CAA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCGCACAACGTGCAGGTTaGTTACATATGTATACACGT +
Preference number: 5 (lower is better)
Translates to: LFPLLSLLSASTITEEHFAQRAG*LHMYTR
Trigger: ACGTGTATACATATGTAACAAACCTGCACGTTGTGC...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCACGCCATCTCCAAGGTaGGAAAACTGTACCTACAAT +
Preference number: 5 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFTPSPR*ENCTYN
Trigger: ATTGTAGGTACAGTTTTCCAACCTTGGAGATGGCGT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS CCA 90 bp ATGGAAAAGCATATGTCTCTAAACTGCACGCAGAGACCACCTGGATaGGCTTATAGTTCTCAATGGTCCCAGATGAGTTCACATAAACAT +
Preference number: 5 (lower is better)
Translates to: MEKHMSLNCTQRPPG*AYSSQWSQMSSHKH
Trigger: ATGTTTATGTGAACTCATCTGGGACCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTGCGTGCAGTTTAGAGACATATGCTTTTCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS-3UTR CAA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCATCATTCCAGACCTCTaGGTACCATACACTTGTCTT +
Preference number: 5 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFIIPDL*VPYTCL
Trigger: AAGACAAGTGTATGGTACCAAGAGGTCTGGAATGAT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCTCATCATGGAGGAATTaGACCAACACGATGGACTTA +
Preference number: 5 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFSSWRN*TNTMDL
Trigger: TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGA...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS-3UTR CAA 90 bp TTATTCCCCCTCCTCTCTCTCCTAAGTGCCAGCACAATTACTGAAGAACACTTCTCTAGCAAACAGCTTTaGGACTTTTGTGTCTTCTAC +
Preference number: 5 (lower is better)
Translates to: LFPLLSLLSASTITEEHFSSKQL*DFCVFY
Trigger: GTAGAAGACACAAAAGTCCAAAAGCTGTTTGCTAGA...GAAGTGTTCTTCAGTAATTGTGCTGGCACTTAGGAGAGAGAGGAGGGGGAATAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp AATTTTATGCTCTGGTTGGTTGGTACCAGGTTGACCATGGGAATCACAACAAGTTCATCATGGAGGAATTaGACCAACACGATGGACTTA +
Preference number: 5 (lower is better)
Translates to: NFMLWLVGTRLTMGITTSSSWRN*TNTMDL
Trigger: TAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGA...ACTTGTTGTGATTCCCATGGTCAACCTGGTACCAACCAACCAGAGCATAAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS-3UTR CAA 90 bp ATAGGCAAGAACCACCACACCCGACCCAGAAAGCTTTTTAACCCACTATTATTCAAAAGTAAGAGGAGCTaGGTTTCTTTAGGAGGTTTC +
Preference number: 5 (lower is better)
Translates to: IGKNHHTRPRKLFNPLLFKSKRS*VSLGGF
Trigger: GAAACCTCCTAAAGAAACCAAGCTCCTCTTACTTTT...GAATAATAGTGGGTTAAAAAGCTTTCTGGGTCGGGTGTGGTGGTTCTTGCCTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS TCA 90 bp AAACAGGTCTCACTTCTTTATGATATTTCTGTAATAGCTGCTTGCTaGGATGATACAGAGCAGAATCCTGGGGATGATGTGTATCTGTGG +
Preference number: 5 (lower is better)
Translates to: KQVSLLYDISVIAAC*DDTEQNPGDDVYLW
Trigger: CCACAGATACACATCATCCCCAGGATTCTGCTCTGTATCATCTCAGCAAGCAGCTATTACAGAAATATCATAAAGAAGTGAGACCTGTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS GCA 90 bp CTATTTTGTAAACACTCAGTGGGACCAAAGGCAATACCAGCACCATaGAAATGTTTTGGAATTGATGCCGTCATGAAATCCCTTAACTTC +
Preference number: 5 (lower is better)
Translates to: LFCKHSVGPKAIPAP*KCFGIDAVMKSLNF
Trigger: GAAGTTAAGGGATTTCATGACGGCATCAATTCCAAAACATTTGCATGGTGCTGGTATTGCCTTTGGTCCCACTGAGTGTTTACAAAATAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS GCA 72 bp GACCAGACTTCCTTCAGGGTTCCTGGCTGGGCCAGGTaGTCTCCATACAGCGAGGACTCTGTTACCACAGCA +
Preference number: 6 (lower is better)
Translates to: DQTSFRVPGWAR*SPYSEDSVTTA
Trigger: TGCTGTGGTAACAGAGTCCTCGCTGTATGGAGAGCACCTGGCCCAGCCAGGAACCCTGAAGGAAGTCTGGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CCA 72 bp ACTGGTCTTGAACACAATCCTGGCTCGGCAGTTGGGTaGCAGGTAGAAGCTCCCCAGGTCCACCAGCATGAG +
Preference number: 6 (lower is better)
Translates to: TGLEHNPGSAVG*QVEAPQVHQHE
Trigger: CTCATGCTGGTGGACCTGGGGAGCTTCTACCTGCCACCCAACTGCCGAGCCAGGATTGTGTTCAAGACCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CCA 72 bp GAAGTGCCCAATCAGAGGGGTGCTCCCTACACTCCGTaGCACCTGGTTGGACATGTTGACCCTGAAGACGGT +
Preference number: 6 (lower is better)
Translates to: EVPNQRGAPYTP*HLVGHVDPEDG
Trigger: ACCGTCTTCAGGGTCAACATGTCCAACCAGGTGCCACGGAGTGTAGGGAGCACCCCTCTGATTGGGCACTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CCA 72 bp TCTCCATACAGCGAGGACTCTGTTACCACAGCACGTTaGGCCCTGGGTTCCACTCTAGGCCTGTCAGCATCG +
Preference number: 6 (lower is better)
Translates to: SPYSEDSVTTAR*ALGSTLGLSAS
Trigger: CGATGCTGACAGGCCTAGAGTGGAACCCAGGGCCCAACGTGCTGTGGTAACAGAGTCCTCGCTGTATGGAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CAA 72 bp CTCTCCATACAGCGAGGACTCTGTTACCACAGCACGTaGGGCCCTGGGTTCCACTCTAGGCCTGTCAGCATC +
Preference number: 6 (lower is better)
Translates to: LSIQRGLCYHST*GPGFHSRPVSI
Trigger: GATGCTGACAGGCCTAGAGTGGAACCCAGGGCCCAACGTGCTGTGGTAACAGAGTCCTCGCTGTATGGAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CAA 90 bp GGAGCACAGAGTGATGGTGTAGATCCCCAGCATGAAAAGGTAGCTTaGGAAGAGCAGTCGGTCAAAGCGGGACAGGAGGACCAGCCACTC +
Preference number: 6 (lower is better)
Translates to: GAQSDGVDPQHEKVA*EEQSVKAGQEDQPL
Trigger: GAGTGGCTGGTCCTCCTGTCCCGCTTTGACCGACTGCTCTTCCAAAGCTACCTTTTCATGCTGGGGATCTACACCATCACTCTGTGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CAA 90 bp CTGTTGGTCTGTCTGGTCCTGAGTTTGGAGGTAGTTGCTGATAGATaGAAGCTGCGACCAGACTTCCTTCAGGGTTCCTGGCTGGGCCAG +
Preference number: 6 (lower is better)
Translates to: LLVCLVLSLEVVADR*KLRPDFLQGSWLGQ
Trigger: CTGGCCCAGCCAGGAACCCTGAAGGAAGTCTGGTCGCAGCTTCAATCTATCAGCAACTACCTCCAAACTCAGGACCAGACAGACCAACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS GCA 72 bp GTGTATCTGTGGCTAGAATTCCTGCAGCCACCAGGATaGAGGCCCACAGGGGAGCCATTACACTTGACAACA +
Preference number: 6 (lower is better)
Translates to: VYLWLEFLQPPG*RPTGEPLHLTT
Trigger: TGTTGTCAAGTGTAATGGCTCCCCTGTGGGCCTGCATCCTGGTGGCTGCAGGAATTCTAGCCACAGATACAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS GCA 72 bp GGGGTGCCTGCGCATCACCACATTAAACTGAATCTGTaGAAATCCTCCAGCGCTGCTCTGCAGGATGCTGTA +
Preference number: 6 (lower is better)
Translates to: GVPAHHHIKLNL*KSSSAALQDAV
Trigger: TACAGCATCCTGCAGAGCAGCGCTGGAGGATTTGCACAGATTCAGTTTAATGTGGTGATGCGCAGGCACCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CAA 72 bp CCACCAGGATGCAGGCCCACAGGGGAGCCATTACACTaGACAACATTCCTGGGCAGATCCCAAAAAGGAGAA +
Preference number: 6 (lower is better)
Translates to: PPGCRPTGEPLH*TTFLGRSQKGE
Trigger: TTCTCCTTTTTGGGATCTGCCCAGGAATGTTGTCAAGTGTAATGGCTCCCCTGTGGGCCTGCATCCTGGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS CAA 90 bp GAGGACCAGCCACTCTGCCTCCTGTTGGTCTGTCTGGTCCTGAGTTaGGAGGTAGTTGCTGATAGATTGAAGCTGCGACCAGACTTCCTT +
Preference number: 6 (lower is better)
Translates to: EDQPLCLLLVCLVLS*EVVADRLKLRPDFL
Trigger: AAGGAAGTCTGGTCGCAGCTTCAATCTATCAGCAACTACCTCCAAACTCAGGACCAGACAGACCAACAGGAGGCAGAGTGGCTGGTCCTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS TCA 72 bp CACCAGGATGCAGGCCCACAGGGGAGCCATTACACTTaGCAACATTCCTGGGCAGATCCCAAAAAGGAGAAA +
Preference number: 6 (lower is better)
Translates to: HQDAGPQGSHYT*QHSWADPKKEK
Trigger: TTTCTCCTTTTTGGGATCTGCCCAGGAATGTTGTCAAGTGTAATGGCTCCCCTGTGGGCCTGCATCCTGGTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS CAA 72 bp AGTGATGGTGTAGATCCCCAGCATGAAAAGGTAGCTTaGGAAGAGCAGTCGGTCAAAGCGGGACAGGAGGAC +
Preference number: 6 (lower is better)
Translates to: SDGVDPQHEKVA*EEQSVKAGQED
Trigger: GTCCTCCTGTCCCGCTTTGACCGACTGCTCTTCCAAAGCTACCTTTTCATGCTGGGGATCTACACCATCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CAA 90 bp AAGAAGGGCTGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTaGACCAACACGATGGACTTAGCTAAGCTGAGAACCAAGAAGGCC +
Preference number: 6 (lower is better)
Translates to: KKGCSCPPRCSSWRN*TNTMDLAKLRTKKA
Trigger: GGCCTTCTTGGTTCTCAGCTTAGCTAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCAGCCCTTCTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 72 bp CAAATCCTCCAGCGCTGCTCTGCAGGATGCTGTATGTaGAGGACACAGATAGAAGTTCCCACTCACTGTCAT +
Preference number: 6 (lower is better)
Translates to: QILQRCSAGCCM*RTQIEVPTHCH
Trigger: ATGACAGTGAGTGGGAACTTCTATCTGTGTCCTCCACATACAGCATCCTGCAGAGCAGCGCTGGAGGATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CAA 72 bp TGCTCCTGTCCACCACGCTGCTCATCATGGAGGAATTaGACCAACACGATGGACTTAGCTAAGCTGAGAACC +
Preference number: 6 (lower is better)
Translates to: CSCPPRCSSWRN*TNTMDLAKLRT
Trigger: GGTTCTCAGCTTAGCTAAGTCCATCGTGTTGGTCAAATTCCTCCATGATGAGCAGCGTGGTGGACAGGAGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CAA 72 bp TGTCTGGTCCTGAGTTTGGAGGTAGTTGCTGATAGATaGAAGCTGCGACCAGACTTCCTTCAGGGTTCCTGG +
Preference number: 6 (lower is better)
Translates to: CLVLSLEVVADR*KLRPDFLQGSW
Trigger: CCAGGAACCCTGAAGGAAGTCTGGTCGCAGCTTCAATCTATCAGCAACTACCTCCAAACTCAGGACCAGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CCA 72 bp CATGGACGAACAGGTCCAGGTAGACTGTGGTGGCCTTaGTCCAGTTGTAAACAGGTCTCACTTCTTTATGAT +
Preference number: 6 (lower is better)
Translates to: HGRTGPGRLWWP*SSCKQVSLLYD
Trigger: ATCATAAAGAAGTGAGACCTGTTTACAACTGGACCAAGGCCACCACAGTCTACCTGGACCTGTTCGTCCATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5
CDS CAA 72 bp GCCAGGTCTACGTCTTCCACTGTATGCAGAATGCTCTaGAAGGTCAGGCTGCAATTCTGGACATCAAATGGA +
Preference number: 6 (lower is better)
Translates to: ARSTSSTVCRML*KVRLQFWTSNG
Trigger: TCCATTTGATGTCCAGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATACAGTGGAAGACGTAGACCTGGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS TCA 72 bp CCAGGTCTACGTCTTCCACTGTATGCAGAATGCTCTTaGAGGTCAGGCTGCAATTCTGGACATCAAATGGAA +
Preference number: 6 (lower is better)
Translates to: PGLRLPLYAECS*RSGCNSGHQME
Trigger: TTCCATTTGATGTCCAGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATACAGTGGAAGACGTAGACCTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 72 bp ACGCAGAGACCACCTGGATGGGCTTATAGTTCTCAATaGTCCCAGATGAGTTCACATAAACATAGGGAAGGT +
Preference number: 6 (lower is better)
Translates to: TQRPPGWAYSSQ*SQMSSHKHREG
Trigger: ACCTTCCCTATGTTTATGTGAACTCATCTGGGACCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTGCGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 72 bp CATATGTCTCTAAACTGCACGCAGAGACCACCTGGATaGGCTTATAGTTCTCAATGGTCCCAGATGAGTTCA +
Preference number: 6 (lower is better)
Translates to: HMSLNCTQRPPG*AYSSQWSQMSS
Trigger: TGAACTCATCTGGGACCATTGAGAACTATAAGCCCATCCAGGTGGTCTCTGCGTGCAGTTTAGAGACATATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 72 bp ATTCAAAAACGCCTTTTTGTCATGCTGAATGTCTTCTaGGCTCCTCAGAAAGGCCAGGTCTACGTCTTCCAC +
Preference number: 6 (lower is better)
Translates to: IQKRLFVMLNVF*APQKGQVYVFH
Trigger: GTGGAAGACGTAGACCTGGCCTTTCTGAGGAGCCCAGAAGACATTCAGCATGACAAAAAGGCGTTTTTGAAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS TCA 72 bp CAGCACCATGCAAATGTTTTGGAATTGATGCCGTCATaGAATCCCTTAACTTCTCCCTTTGGTTCTGCCCCA +
Preference number: 6 (lower is better)
Translates to: QHHANVLELMPS*NPLTSPFGSAP
Trigger: TGGGGCAGAACCAAAGGGAGAAGTTAAGGGATTTCATGACGGCATCAATTCCAAAACATTTGCATGGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS GCA 72 bp AAACACTCAGTGGGACCAAAGGCAATACCAGCACCATaGAAATGTTTTGGAATTGATGCCGTCATGAAATCC +
Preference number: 6 (lower is better)
Translates to: KHSVGPKAIPAP*KCFGIDAVMKS
Trigger: GGATTTCATGACGGCATCAATTCCAAAACATTTGCATGGTGCTGGTATTGCCTTTGGTCCCACTGAGTGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000260191.7
CDS GCA 72 bp TCTGGACATCAAATGGAAAAGCATATGTCTCTAAACTaGACGCAGAGACCACCTGGATGGGCTTATAGTTCT +
Preference number: 6 (lower is better)
Translates to: SGHQMEKHMSLN*TQRPPGWAYSS
Trigger: AGAACTATAAGCCCATCCAGGTGGTCTCTGCGTGCAGTTTAGAGACATATGCTTTTCCATTTGATGTCCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 72 bp GTATGCAGAATGCTCTTGAAGGTCAGGCTGCAATTCTaGACATCAAATGGAAAAGCATATGTCTCTAAACTG +
Preference number: 6 (lower is better)
Translates to: VCRMLLKVRLQF*TSNGKAYVSKL
Trigger: CAGTTTAGAGACATATGCTTTTCCATTTGATGTCCAGAATTGCAGCCTGACCTTCAAGAGCATTCTGCATAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000260191.7
ENST00000537778.5
ENST00000543092.1
CDS CCA 72 bp GTTTCTTTAGGAGGTTTCAGACTGTTCAGGACTCGGTaGCTTTTACTAGAATATAGCTTTCAGCTCACCAAA +
Preference number: 6 (lower is better)
Translates to: VSLGGFRLFRTR*LLLEYSFQLTK
Trigger: TTTGGTGAGCTGAAAGCTATATTCTAGTAAAAGCCACCGAGTCCTGAACAGTCTGAAACCTCCTAAAGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000537778.5
CDS TCA 72 bp TCACTTCTTTATGATATTTCTGTAATAGCTGCTTGCTaGGATGATACAGAGCAGAATCCTGGGGATGATGTG +
Preference number: 6 (lower is better)
Translates to: SLLYDISVIAAC*DDTEQNPGDDV
Trigger: CACATCATCCCCAGGATTCTGCTCTGTATCATCTCAGCAAGCAGCTATTACAGAAATATCATAAAGAAGTGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000260191.7
ENST00000537778.5