RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HTR3A (Homo sapiens)

Ensembl gene IDs: ENSG00000166736

Ensembl transcript IDs: ENST00000299961.5, ENST00000355556.6, ENST00000375498.6, ENST00000502622.1, ENST00000504030.6, ENST00000504030.7, ENST00000506841.6, ENST00000510849.5

Found 460 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CAGCTCCTGCAGCAGCCCACACACCGCCAGCGAGGCCTCCCGAGGTaGTGGGGGAGGGCTACATCTGTCCCTCGGGCTCTTCTCGAAGTC +
Preference number: 1 (lower is better)
Translates to: QLLQQPTHRQRGLPR*WGRATSVPRALLEV
Trigger: GACTTCGAGAAGAGCCCGAGGGACAGATGTAGCCCTCCCCCACCACCTCGGGAGGCCTCGCTGGCGGTGTGTGGGCTGCTGCAGGAGCTG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR GCA 90 bp ATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCCAGCGAGGCCTCCCGAGGTGGTGGG +
Preference number: 1 (lower is better)
Translates to: ISSRFSRNCRMEDSS*SSPHTASEASRGGG
Trigger: CCCACCACCTCGGGAGGCCTCGCTGGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 90 bp GGTGGGGGAGGGCTACATCTGTCCCTCGGGCTCTTCTCGAAGTCCTaGGGTCCTCCCATGTGGCTGCAGTGGTTTCCCATGGCTGAGCAG +
Preference number: 1 (lower is better)
Translates to: GGGGLHLSLGLFSKS*GPPMWLQWFPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATGTAGCCCTCCCCCACC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR TCA 90 bp TGCTCCCTCAGGCAAAGTAGCCAGGCGATTCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTTGCTTGTGC +
Preference number: 1 (lower is better)
Translates to: CSLRQSSQAILSRTR*RSQAGTGCCRSCLC
Trigger: GCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAGAATCGCCTGGCTACTTTGCCTGAGGGAGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 90 bp CATCTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTaGCTGCAGTGGTTTCCCATGGCTGAGCAGTCATCAGTCTTGGTG +
Preference number: 1 (lower is better)
Translates to: HLSLGLFSKSWGPPM*LQWFPMAEQSSVLV
Trigger: CACCAAGACTGATGACTGCTCAGCCATGGGAAACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR TCA 90 bp CAGGCACGGGCTGCTGCAGGTCTTGCTTGTGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAACTTATCACCAGCAGAGCCATGCACA +
Preference number: 1 (lower is better)
Translates to: QARAAAGLACAPAAQ*RWSRPNLSPAEPCT
Trigger: TGTGCATGGCTCTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR TCA 90 bp CACCCAGTTTTTGGTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTaGGATGAATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTG +
Preference number: 1 (lower is better)
Translates to: HPVFGGRVQTLACDC*DELALETGHGTLSV
Trigger: CACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR CCA 90 bp GTAAGGGCCTTGAACACCCAGTTTTTGGTGGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATGAATTGGCATTGGAAACAGGGCACG +
Preference number: 1 (lower is better)
Translates to: VRALNTQFLVEGFRP*LVIAEMNWHWKQGT
Trigger: CGTGCCCTGTTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAAGGCCCTTAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR CCA 90 bp GAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTaGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCT +
Preference number: 1 (lower is better)
Translates to: EGFRPWLVIAEMNWH*KQGTGLCLCLENVP
Trigger: AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR GCA 90 bp CTCGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGGGCTGCTGCAGGTCTTaGTTGTGCACCAGCCGCACA +
Preference number: 2 (lower is better)
Translates to: LGPPLGSHPAFPGIAGWRGCCRS*LCTSRT
Trigger: TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCC...CCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CAA 90 bp CAGAACCAGGTGACGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCACAATGAAGATGGTCTCGGCCAAACT +
Preference number: 2 (lower is better)
Translates to: QNQVTQPSRHGLLQV*LVHQPHNEDGLGQT
Trigger: AGTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCACCTGGTTCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR TCA 90 bp CTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTGGCAAAGTAGACACCAATaGGAGGAGTGCCGATGGCAG +
Preference number: 2 (lower is better)
Translates to: LSLGLFSKSWGPPMWLQWQSRHQ*EECRWQ
Trigger: CTGCCATCGGCACTCCTCTCATTGGTGTCTACTTTG...CCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR TCA 90 bp CGCGCAGCCAGTCTCGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAAC +
Preference number: 2 (lower is better)
Translates to: RAASLGPPLGSHPAFPGIAPAAQ*RWSRPN
Trigger: GTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGC...AATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCGAGACTGGCTGCGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR TCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGGGGCCTCTGGGAAGTTaGCTGCTCCCTCAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLGPLGS*LLPQAK
Trigger: CTTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCC...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CCA 90 bp CTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGGTGGCTGGGGGCCTCTaGGAAGTTGACTGCTCCCTC +
Preference number: 2 (lower is better)
Translates to: LSDLIPLFQELPDGGQLLVAGGL*EVDCSL
Trigger: GAGGGAGCAGTCAACTTCCCAGAGGCCCCCAGCCAC...CAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR TCA 90 bp TGTAGGCCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACG +
Preference number: 2 (lower is better)
Translates to: CRPAPLAGKCGIAACPARLSRTR*RSQAGT
Trigger: CGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAG...CCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGGCCTACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CCA 90 bp GTCTCGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGACCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAG +
Preference number: 2 (lower is better)
Translates to: VSGHLSDLIPLFQELPDGPMWLQ*FPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGG...TCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCGAGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR GCA 90 bp GGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCTGGGAAGTTGACTaGTCCCTCAGGCAAAGTAGC +
Preference number: 2 (lower is better)
Translates to: GHLSDLIPLFQELPDGGQLWEVD*SLRQSS
Trigger: GCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGAG...CTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGTGAGCTGCTGGGGGTaGGACAAGGGTGTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVVSCWG*DKGVRA
Trigger: GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCAC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGCCATGGTGAGCTGCTaGGGGTGGGACAAGGGTGTA +
Preference number: 2 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARAMVSC*GWDKGV
Trigger: TACACCCTTGTCCCACCCCCAGCAGCTCACCATGGC...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp CCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGAGCCCAAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTG +
Preference number: 2 (lower is better)
Translates to: PAPLAGKCGIAACPARSPSSHQS*WLGRWL
Trigger: CAGCCACCTCCCAAGCCACCAAGACTGATGACTGCT...TGGGCTCCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CCA 90 bp CACTCAAGCGTACTGCCAGATGGACCAGAGCATAACCAGGGTGATGCTGTAGGCCCAGGAATTGCCGGATaGAGGACAGCTCCTGCAGCA +
Preference number: 2 (lower is better)
Translates to: HSSVLPDGPEHNQGDAVGPGIAG*RTAPAA
Trigger: TGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGG...GCCTACAGCATCACCCTGGTTATGCTCTGGTCCATCTGGCAGTACGCTTGAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CAA 90 bp AAAGCCATGGTGAGCTGCTGGGGGTGGGACAAGGGTGTAAGGGCCTaGAACACCCAGTTTTTGGTGGAAGGGTTCAGACCTTGGCTTGTG +
Preference number: 2 (lower is better)
Translates to: KAMVSCWGWDKGVRA*NTQFLVEGFRPWLV
Trigger: CACAAGCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCACCATGGCTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR GCA 90 bp TCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCTGCAGGTCTTGCTTGTaGACCAGCCGCACAATGAAG +
Preference number: 2 (lower is better)
Translates to: SRISSRFSRNCRMEDSSCCRSCL*TSRTMK
Trigger: CTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCA...GCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGTTTTAAAGCCATGGTaGGCTGCTGGGGGTGGGACA +
Preference number: 2 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVVLKPW*AAGGGT
Trigger: TGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: LVQSYQACVVESWFCLQPVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGTGAGCTGCTGGGGGTaGGACAAGGGTGTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: RSLVQSYQACVVESWFCLVSCWG*DKGVRA
Trigger: GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCAC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGTGAGCTGCTGGGGGTaGGACAAGGGTGTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLVSCWG*DKGVRA
Trigger: GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCAC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGTGAGCTGCTGGGGGTaGGACAAGGGTGTAAGGGCC +
Preference number: 2 (lower is better)
Translates to: LVQSYQACVVESWFCLQPVSCWG*DKGVRA
Trigger: GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCAC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGTTTTAAAGCCATGGTaGGCTGCTGGGGGTGGGACA +
Preference number: 2 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSVLKPW*AAGGGT
Trigger: TGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 2 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARTPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGCCATGGTGAGCTGCTaGGGGTGGGACAAGGGTGTA +
Preference number: 2 (lower is better)
Translates to: LVQSYQACVVESWFCLQPAMVSC*GWDKGV
Trigger: TACACCCTTGTCCCACCCCCAGCAGCTCACCATGGC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGCCATGGTGAGCTGCTaGGGGTGGGACAAGGGTGTA +
Preference number: 2 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLAMVSC*GWDKGV
Trigger: TACACCCTTGTCCCACCCCCAGCAGCTCACCATGGC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: VRVNGEKSTTRVDLGSAREGFRP*LVIAEM
Trigger: CATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAACTTTGTCTGTGTCTTaGAAATGTCCCTGGCATTCC +
Preference number: 2 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARTLSVS*KCPWHS
Trigger: GGAATGCCAGGGACATTTTCAAGACACAGACAAAGT...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGAGATGAATTGGCATTaGAAACAGGGCACGGGACTT +
Preference number: 2 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSEMNWH*KQGTGL
Trigger: AAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 2 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHTPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 2 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKTPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGGAGATGAATTGGCATTaGAAACAGGGCACGGGACTT +
Preference number: 2 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKEMNWH*KQGTGL
Trigger: AAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTC...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: LVQSYQACVVESWFCLQPEGFRP*LVIAEM
Trigger: CATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 2 (lower is better)
Translates to: LEKPRTELSGLCSRELVLTPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGACTTTGTCTGTGTCTTaGAAATGTCCCTGGCATTCC +
Preference number: 2 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKTLSVS*KCPWHS
Trigger: GGAATGCCAGGGACATTTTCAAGACACAGACAAAGT...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAACTTTGTCTGTGTCTTaGAAATGTCCCTGGCATTCC +
Preference number: 2 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKTLSVS*KCPWHS
Trigger: GGAATGCCAGGGACATTTTCAAGACACAGACAAAGT...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTATGCCCGAGTTTCTCCTaGTCTAAGACAGCATGTTTT +
Preference number: 2 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLCPSFS*SKTACF
Trigger: AAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCA...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATG +
Preference number: 2 (lower is better)
Translates to: LEKPRTELSGLCSRELVLEGFRP*LVIAEM
Trigger: CATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTATTGGCTTGTGATTGCTaGGATGAATTGGCATTGGAA +
Preference number: 2 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLLACDC*DELALE
Trigger: TTCCAATGCCAATTCATCTCAGCAATCACAAGCCAA...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR TCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGTTGGCTTGTGATTGCTaGGATGAATTGGCATTGGAA +
Preference number: 2 (lower is better)
Translates to: LEKPRTELSGLCSRELVLLACDC*DELALE
Trigger: TTCCAATGCCAATTCATCTCAGCAATCACAAGCCAA...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR CCA 72 bp CAGCAGCCCACACACCGCCAGCGAGGCCTCCCGAGGTaGTGGGGGAGGGCTACATCTGTCCCTCGGGCTCTT +
Preference number: 3 (lower is better)
Translates to: QQPTHRQRGLPR*WGRATSVPRAL
Trigger: AAGAGCCCGAGGGACAGATGTAGCCCTCCCCCACCACCTCGGGAGGCCTCGCTGGCGGTGTGTGGGCTGCTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR GCA 72 bp CGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCCAGCGAGGCCTCCCGA +
Preference number: 3 (lower is better)
Translates to: RFSRNCRMEDSS*SSPHTASEASR
Trigger: TCGGGAGGCCTCGCTGGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR TCA 72 bp AGGCAAAGTAGCCAGGCGATTCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCT +
Preference number: 3 (lower is better)
Translates to: RQSSQAILSRTR*RSQAGTGCCRS
Trigger: AGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAGAATCGCCTGGCTACTTTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 72 bp TGCAGTGGTTTCCCATGGCTGAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTGGGGGCCTCTGGGAAG +
Preference number: 3 (lower is better)
Translates to: CSGFPWLSSHQS*WLGRWLGASGK
Trigger: CTTCCCAGAGGCCCCCAGCCACCTCCCAAGCCACCAAGACTGATGACTGCTCAGCCATGGGAAACCACTGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 72 bp GGGCTACATCTGTCCCTCGGGCTCTTCTCGAAGTCCTaGGGTCCTCCCATGTGGCTGCAGTGGTTTCCCATG +
Preference number: 3 (lower is better)
Translates to: GLHLSLGLFSKS*GPPMWLQWFPM
Trigger: CATGGGAAACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATGTAGCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR GCA 72 bp AGCCAAGCAGGCACGGGCTGCTGCAGGTCTTGCTTGTaGACCAGCCGCACAATGAAGATGGTCTCGGCCAAA +
Preference number: 3 (lower is better)
Translates to: SQAGTGCCRSCL*TSRTMKMVSAK
Trigger: TTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR GCA 72 bp CCCCTCCTCCACTGGGCTGTACCCACTCAAGCGTACTaGCAGATGGACCAGAGCATAACCAGGGTGATGCTG +
Preference number: 3 (lower is better)
Translates to: PLLHWAVPTQAY*QMDQSITRVML
Trigger: CAGCATCACCCTGGTTATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGGTACAGCCCAGTGGAGGAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 72 bp CTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTaGCTGCAGTGGTTTCCCATGGCTGAGCAGTCATCA +
Preference number: 3 (lower is better)
Translates to: LGLFSKSWGPPM*LQWFPMAEQSS
Trigger: TGATGACTGCTCAGCCATGGGAAACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CAA 90 bp TCTGGGAAGTTGACTGCTCCCTCAGGCAAAGTAGCCAGGCGATTCTCTCCAGAAGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCAC +
Preference number: 3 (lower is better)
Translates to: SGKLTAPSGKVARRFSPEGLLQV*LVHQPH
Trigger: GTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCC...TTCTGGAGAGAATCGCCTGGCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR-3UTR CAA 90 bp ATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCGAGCAGTCATCAGTCTaGGTGGCTTGGGAGGTGGCT +
Preference number: 3 (lower is better)
Translates to: ISSRFSRNCRMEDSSCSSEQSSV*VAWEVA
Trigger: AGCCACCTCCCAAGCCACCAAGACTGATGACTGCTC...GCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR GCA 72 bp GGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTaGAGTGGTTTCCCATGGCTGAGCAGTCATCAGTCT +
Preference number: 3 (lower is better)
Translates to: GSSRSPGVLPCG*SGFPWLSSHQS
Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 72 bp TTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAGTCATCAGTCTTGGTG +
Preference number: 3 (lower is better)
Translates to: FSKSWGPPMWLQ*FPMAEQSSVLV
Trigger: CACCAAGACTGATGACTGCTCAGCCATGGGAAACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR TCA 72 bp GCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTaGAAATGTCCCTGGCATTCCCTGGGTCCTGAGGGG +
Preference number: 3 (lower is better)
Translates to: ALETGHGTLSVS*KCPWHSLGPEG
Trigger: CCCCTCAGGACCCAGGGAATGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR TCA 72 bp GCTGCTGCAGGTCTTGCTTGTGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAACTTATCACCAGCAGAG +
Preference number: 3 (lower is better)
Translates to: AAAGLACAPAAQ*RWSRPNLSPAE
Trigger: CTCTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CCA 72 bp CTTTGTCTGTGTCTTGAAAATGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCC +
Preference number: 3 (lower is better)
Translates to: LCLCLENVPGIP*VLRGLSRNPLS
Trigger: GGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGACATTTTCAAGACACAGACAAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAAAGGGTGTAAGGGCCTaGAACACCCAGTTTTTGGTG +
Preference number: 3 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARKGVRA*NTQFLV
Trigger: CACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTT...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGATTGAACACCCAGTTTTaGGTGGAAGGGTTCAGACCT +
Preference number: 3 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARLNTQF*VEGFRP
Trigger: AGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAA...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTTGAACACCCAGTTTTaGGTGGAAGGGTTCAGACCT +
Preference number: 3 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVLNTQF*VEGFRP
Trigger: AGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAA...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTAAGGGTGTAAGGGCCTaGAACACCCAGTTTTTGGTG +
Preference number: 3 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSKGVRA*NTQFLV
Trigger: CACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTT...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR CCA 72 bp AGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTaGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAA +
Preference number: 3 (lower is better)
Translates to: RPWLVIAEMNWH*KQGTGLCLCLE
Trigger: TTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: RSLVQSYQACVVESWFCLDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR-3UTR CAA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 3 (lower is better)
Translates to: LEKPRTELSGLCSRELVLDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR CCA 72 bp TTGAACACCCAGTTTTTGGTGGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATGAATTGGCATTGGAAA +
Preference number: 3 (lower is better)
Translates to: LNTQFLVEGFRP*LVIAEMNWHWK
Trigger: TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
3UTR CCA 72 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTaGTTTTGCCTTCAACCTAAAAGCAAAGTTGTGAAA +
Preference number: 3 (lower is better)
Translates to: LVQSYQACVVES*FCLQPKSKVVK
Trigger: TTTCACAACTTTGCTTTTAGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CAGGTGACGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTTGCTTGTGCACCAGATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: QVTQPSRHGLLQVLLVHQMEDSS*SSPHTA
Trigger: GGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCAT...CTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp GTCCAGCACGGAGCCCACGCGCAGCCAGTCTCGGGCCACCTCTCGGATCTCATCCCAGGAATTGCCGGATaGAGGACAGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: VQHGAHAQPVSGHLSDLIPGIAG*RTAPAA
Trigger: TGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGG...GATGAGATCCGAGAGGTGGCCCGAGACTGGCTGCGCGTGGGCTCCGTGCTGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CAA 72 bp CGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTTGCTaGTGCACCAGCCGCACAATGAAGATGGTCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RSQAGTGCCRSC*CTSRTMKMVSA
Trigger: GGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp CAGGTGACGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTTGCTTGTGCACCAGAAGGCGAGCAGCGCCTaGTGGACCCACAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: QVTQPSRHGLLQVLLVHQKASSA*WTHSSI
Trigger: TATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGCCTT...CTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCACCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp TGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTGGTCCTGGCTTCTCCCTGTaGCAGGAGTGTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: CPSGSSRSPGVLPCGCSGPGFSL*QECGEE
Trigger: CTCCTCCCCACACTCCTGGCACAGGGAGAAGCCAGG...ACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp TCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCCCACACCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: SRFSRNCRMEDSSCSSPHLSRTR*RSQAGT
Trigger: CGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAG...GTGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGGCCGCCGGCGGATaGCCACTGGTGTGCAGCCAA +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTGAAGG*PLVCSQ
Trigger: TTGGCTGCACACCAGTGGTCATCCGCCGGCGGCCCC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPSAERA*WCFGSS
Trigger: GGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGA...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACCCCTCTCGCCACTGTTaGGGGGCAGGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RATSRISSRFSRNCRMEDPSRHC*GAGRSP
Trigger: TGGGCTTCTACCTGCCCCCCAACAGTGGCGAGAGGG...GTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTGTGGCTGGGGGCCTCTaGGAAGTTGACTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPVAGGL*EVDCSL
Trigger: GAGGGAGCAGTCAACTTCCCAGAGGCCCCCAGCCAC...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTTGCTTGTGCACCAGCCGCACAAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RSQAGTGCCRSCLCTSRTSSHQS*WLGRWL
Trigger: CAGCCACCTCCCAAGCCACCAAGACTGATGACTGCT...TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTTGTCCGGGACCCAGATaGTGTCCGTGGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPCPGPR*CPWGWT
Trigger: TGTCCATCCCCACGGACAGCATCTGGGTCCCGGACA...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAAGGCGAGCAGCGCCTaGTGGACCCACAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPKASSA*WTHSSI
Trigger: TATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGCCTT...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGGCCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGAGCGCAGAGCGGGCCTGGTaGTGTTTCGGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RPAPLAGKCGIAACPARSAERAW*CFGSSW
Trigger: CCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGC...GCTCCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLSAERA*WCFGSS
Trigger: GGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGA...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGCCCTCTCGCCACTGTTaGGGGGCAGGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLPSRHC*GAGRSP
Trigger: TGGGCTTCTACCTGCCCCCCAACAGTGGCGAGAGGG...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp TGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTGGTCCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: CPSGSSRSPGVLPCGCSGPMWLQ*FPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGG...ACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp TGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTGGTTGGGGTCCTCCCATGTaGCTGCAGTGGTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: CPSGSSRSPGVLPCGCSGWGPPM*LQWFPM
Trigger: CATGGGAAACCACTGCAGCCACATGGGAGGACCCCA...ACCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCGAGGCCTCCCGAGGTaGTGGGGGAGGGCTACATCT +
Preference number: 4 (lower is better)
Translates to: LSDLIPLFQELPDGGQLLRGLPR*WGRATS
Trigger: AGATGTAGCCCTCCCCCACCACCTCGGGAGGCCTCG...CAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGGTGAGCTGCTGGGGGTaGGACAAGGGTGTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLVSCWG*DKGVRA
Trigger: GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCAC...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGCAGCCTCACACTCCCTaGGCCACCAAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLQPHTP*ATKVGE
Trigger: CTCCCCAACCTTGGTGGCCCAGGGAGTGTGAGGCTG...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR CCA 90 bp CCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGAGCCCAGCGAGCAGCGCCTGCTaGACCCACAGCAGCATAGCG +
Preference number: 4 (lower is better)
Translates to: PAPLAGKCGIAACPARSPASSAC*THSSIA
Trigger: CGCTATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGC...TGGGCTCCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CAA 72 bp GTGACGCAGCCAAGCAGGCACGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCACAATGAAGATGGTCTC +
Preference number: 4 (lower is better)
Translates to: VTQPSRHGLLQV*LVHQPHNEDGL
Trigger: GAGACCATCTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCCGTGCCTGCTTGGCTGCGTCAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
3UTR CAA 72 bp GGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATaGCCGGATGGAGGACAGCTCCTGCAGCAGCCCACA +
Preference number: 4 (lower is better)
Translates to: GHLSDLIPLFQE*PDGGQLLQQPT
Trigger: TGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp GCCAGGCGATTCTCTCCAGAACCAGGTGACGCAGCCAAGCAGGCACGGGCTGCTCAAAGTAGACACCAATaGGAGGAGTGCCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: ARRFSPEPGDAAKQARAAQSRHQ*EECRWQ
Trigger: CTGCCATCGGCACTCCTCTCATTGGTGTCTACTTTG...AGCAGCCCGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAGAATCGCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQLSRTR*RSQAGT
Trigger: CGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAG...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTCTCGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGATGTCCGGGACCCAGATaGTGTCCGTGGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: VSGHLSDLIPLFQELPDGCPGPR*CPWGWT
Trigger: TGTCCATCCCCACGGACAGCATCTGGGTCCCGGACA...TCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCGAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQMEDSS*SSPHTA
Trigger: GGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCAT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTGGCCCACTCAAGCGTACTaGCAGATGGACCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: LSLGLFSKSWGPPMWLQWPTQAY*QMDQSI
Trigger: TATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGG...CCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGATGTCCCAGCCAGCCTaGCTCTCGTGGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQMSQPA*LSWPLL
Trigger: GAGCAGTGGCCACGAGAGGCAGGCTGGCTGGGACAT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGAGCTTGCCTGCCCTCTaGCAACCTCATGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLSLPAL*QPHVPA
Trigger: GGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCT...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGAGGAGTGCCTCCGAGTaGTCAGGACGAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQRSASE*SGRGPP
Trigger: TGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCCT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTCAGACTGAGCTCTGCTaGCAGGAGGGGCCTTACCAA +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPQTELC*QEGPYQ
Trigger: TTGGTAAGGCCCCTCCTGGCAGCAGAGCTCAGTCTG...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTGGGCTGTACCCACTCAAGCGTACTGCCAGATGGACCAGAGCATAACCAGGGTTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: LGCTHSSVLPDGPEHNQGSAERA*WCFGSS
Trigger: GGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGA...ACCCTGGTTATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGGTACAGCCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTTGGGGTCCTCCCATGTaGCTGCAGTGGTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPWGPPM*LQWFPM
Trigger: CATGGGAAACCACTGCAGCCACATGGGAGGACCCCA...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTCGAGGCCTCCCGAGGTaGTGGGGGAGGGCTACATCT +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTRGLPR*WGRATS
Trigger: AGATGTAGCCCTCCCCCACCACCTCGGGAGGCCTCG...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR TCA 90 bp CGCGCAGCCAGTCTCGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTTGTGCAGCCAACTGGTaGAGGTCAGCGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RAASLGPPLGSHPAFPGICAANW*RSASSS
Trigger: AGAACTGCTCGCTGACCTTCACCAGTTGGCTGCACA...AATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCGAGACTGGCTGCGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGGGCCTCTGGGAAGTTaGCTGCTCCCTCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQGPLGS*LLPQAK
Trigger: CTTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGAGGGGCCTTACCAATaGGAGGAGTGCCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQEGPYQ*EECRWQ
Trigger: CTGCCATCGGCACTCCTCTCATTGGTAAGGCCCCTC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGTGTCCGGGACCCAGATaGTGTCCGTGGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQCPGPR*CPWGWT
Trigger: TGTCCATCCCCACGGACAGCATCTGGGTCCCGGACA...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTCGGGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGCGCTTTTCCAGGAATTaGCGGATGGAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: LGPPLGSHPAFPGIAGWRRFSRN*RMEDSS
Trigger: GGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCG...CCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCCCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTAGGAGTGCCTCCGAGTaGTCAGGACGAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTRSASE*SGRGPP
Trigger: TGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCCT...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGAAGGCGAGCAGCGCCTaGTGGACCCACAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQKASSA*WTHSSI
Trigger: TATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGCCTT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CATCTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGGTCAGCGAGCAGTTCTaGACATCGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: HLSLGLFSKSWGPPMWLQVSEQF*TSKGKL
Trigger: CAACTTCCCCTTCGATGTCCAGAACTGCTCGCTGAC...CTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGTGGGGTCCTCCCATGTaGCTGCAGTGGTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLWGPPM*LQWFPM
Trigger: CATGGGAAACCACTGCAGCCACATGGGAGGACCCCA...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGCCAGGAATTGCCGGATaGAGGACAGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLPGIAG*RTAPAA
Trigger: TGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGG...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGCCATGGTGAGCTGCTaGGGGTGGGACAAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQAMVSC*GWDKGV
Trigger: TACACCCTTGTCCCACCCCCAGCAGCTCACCATGGC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGTGTGCAGCCAACTGGTaGAGGTCAGCGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLCAANW*RSASSS
Trigger: AGAACTGCTCGCTGACCTTCACCAGTTGGCTGCACA...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQAPAAQ*RWSRPN
Trigger: GTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGGCCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGAGCGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: RPAPLAGKCGIAACPARSAPAAQ*RWSRPN
Trigger: GTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGC...GCTCCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTTGCAGGTCTTGCTTGTaGACCAGCCGCACAATGAAG +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPCRSCL*TSRTMK
Trigger: CTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCA...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARMEDSS*SSPHTA
Trigger: GGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCAT...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGCGCTTTTCCAGGAATTaGCGGATGGAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLRFSRN*RMEDSS
Trigger: GGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCG...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR GCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTCCCACTCAAGCGTACTaGCAGATGGACCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPPTQAY*QMDQSI
Trigger: TATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGG...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGCCTCTCGTGGCCACTaGTCACACCTTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTASRGH*SHLLRL
Trigger: CAGCCTCAGAAGGTGTGAGCAGTGGCCACGAGAGGC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGAAGGGCCAGCTTGCCTaGCCTCTGCCAACCTCATGT +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQKGQLA*PLPTSC
Trigger: ACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTCACCAGACTGAGCTCTaGTGCCAGGAGGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTHQTEL*CQEGPY
Trigger: GTAAGGCCCCTCCTGGCAGCAGAGCTCAGTCTGGTG...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGCAAAGTAGACACCTGTaGAGCCCAGGGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLQSRHL*SPGQRQ
Trigger: TTGCCTCTGCCCTGGGCTGCACAGGTGTCTACTTTG...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGCAGAGCGGGCCTGGTaGTGTTTCGGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVAERAW*CFGSSW
Trigger: CCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGACCCTCTCGCCACTGTTaGGGGGCAGGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARPSRHC*GAGRSP
Trigger: TGGGCTTCTACCTGCCCCCCAACAGTGGCGAGAGGG...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGAGTGCCGATGGCAGTaGCCGGCAGCGTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTECRWQ*PAACQK
Trigger: TTTCTGACACGCTGCCGGCCACTGCCATCGGCACTC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp CACTCAAGCGTACTGCCAGATGGACCAGAGCATAACCAGGGTGATGCTGTAGGCGAGTGCCGATGGCAGTaGCCGGCAGCGTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: HSSVLPDGPEHNQGDAVGECRWQ*PAACQK
Trigger: TTTCTGACACGCTGCCGGCCACTGCCATCGGCACTC...GCCTACAGCATCACCCTGGTTATGCTCTGGTCCATCTGGCAGTACGCTTGAGTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CTTGTGCACCAGCCGCACAATGAAGATGGTCTCGGCCAAACTTATCACCAGCAGGTGGCTGGGGGCCTCTaGGAAGTTGACTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: LVHQPHNEDGLGQTYHQQVAGGL*EVDCSL
Trigger: GAGGGAGCAGTCAACTTCCCAGAGGCCCCCAGCCAC...CTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLSSHQS*WLGRWL
Trigger: CAGCCACCTCCCAAGCCACCAAGACTGATGACTGCT...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGTGGGGTCCTCCCATGTaGCTGCAGTGGTTTCCCATG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQWGPPM*LQWFPM
Trigger: CATGGGAAACCACTGCAGCCACATGGGAGGACCCCA...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTGGGCTGTACCCACTCAAGCGTACTGCCAGATGGACCAGAGCATAACCAGGGTCTCTTCTCGAAGTCCTaGGGTCCTCCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LGCTHSSVLPDGPEHNQGLFSKS*GPPMWL
Trigger: CAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAG...ACCCTGGTTATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGGTACAGCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGCGAGCAGCGCCTGCTaGACCCACAGCAGCATAGCG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAASSAC*THSSIA
Trigger: CGCTATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCCCACACGGATGGCATAGACAATaGCGTCAATGGATACGGTGG +
Preference number: 4 (lower is better)
Translates to: SRFSRNCRMEDSSCSSPHGWHRQ*RQWIRW
Trigger: CCACCGTATCCATTGACGTCATTGTCTATGCCATCC...GTGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp CATCTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGGGATGGACAACTTGGTaGTGTTGTCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: HLSLGLFSKSWGPPMWLQGWTTW*CCQSPQ
Trigger: CTGAGGACTTTGACAACATCACCAAGTTGTCCATCC...CTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGTGTGCAGCCAACTGGTaGAGGTCAGCGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQCAANW*RSASSS
Trigger: AGAACTGCTCGCTGACCTTCACCAGTTGGCTGCACA...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTTACTGCTTTCCATGCTaGACTCCCGAAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPYCFPC*TPESRA
Trigger: TGCCCTACTTTCGGGAGTTCAGCATGGAAAGCAGTA...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTAPAAQ*RWSRPN
Trigger: GTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR TCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVLSRTR*RSQAGT
Trigger: CGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAG...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CTTGTGCACCAGCCGCACAATGAAGATGGTCTCGGCCAAACTTATCACCAGCAGGGGCCTCTGGGAAGTTaGCTGCTCCCTCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: LVHQPHNEDGLGQTYHQQGPLGS*LLPQAK
Trigger: CTTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCC...CTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGCACAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTACTGCTCACACCTTCTaGGGCTGCAGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTTAHTF*GCSLTL
Trigger: GAGTGTGAGGCTGCAGCCTCAGAAGGTGTGAGCAGT...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR GCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGATGTCCGGGACCCAGATaGTGTCCGTGGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARCPGPR*CPWGWT
Trigger: TGTCCATCCCCACGGACAGCATCTGGGTCCCGGACA...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CCGCACAATGAAGATGGTCTCGGCCAAACTTATCACCAGCAGAGCCATGCACACGGCTGCTGCAGGTCTTaGTTGTGCACCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: PHNEDGLGQTYHQQSHAHGCCRS*LCTSRT
Trigger: TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCC...GTGTGCATGGCTCTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTGAGATGTTGATGTCCTaGATGGTGTGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPEMLMS*MVCSQL
Trigger: CAGTTGGCTGCACACCATCCAGGACATCAACATCTC...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGAGTGCCGATGGCAGTaGCCGGCAGCGTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARECRWQ*PAACQK
Trigger: TTTCTGACACGCTGCCGGCCACTGCCATCGGCACTC...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGTGGCTGGGGGCCTCTaGGAAGTTGACTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVVAGGL*EVDCSL
Trigger: GAGGGAGCAGTCAACTTCCCAGAGGCCCCCAGCCAC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGTGGCTGGGGGCCTCTaGGAAGTTGACTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAVAGGL*EVDCSL
Trigger: GAGGGAGCAGTCAACTTCCCAGAGGCCCCCAGCCAC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTCCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTPMWLQ*FPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGG...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGTGAGCTGCTGGGGGTaGGACAAGGGTGTAAGGGCC +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAVSCWG*DKGVRA
Trigger: GGCCCTTACACCCTTGTCCCACCCCCAGCAGCTCAC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTTGTGCAGCCAACTGGTaGAGGTCAGCGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTCAANW*RSASSS
Trigger: AGAACTGCTCGCTGACCTTCACCAGTTGGCTGCACA...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGCGTGTCAGAAACGATaGTCAGGAAGACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQACQKR*SGRPSS
Trigger: GCTACTCGGTCTTCCTGATCATCGTTTCTGACACGC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGCACCAGCCGCACAATaGAGATGGTCTCGGCCAAAC +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARAPAAQ*RWSRPN
Trigger: GTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTGC...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGAGGGGCCTTACCAATaGGAGGAGTGCCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAEGPYQ*EECRWQ
Trigger: CTGCCATCGGCACTCCTCTCATTGGTAAGGCCCCTC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGGTTTCTCACCAGACTaGGCTCTGCTGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAGFSPD*ALLPGG
Trigger: CCCTCCTGGCAGCAGAGCTCAGTCTGGTGAGAAACC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCTGCAGGTCTTGCTTGTaGACCAGCCGCACAATGAAG +
Preference number: 4 (lower is better)
Translates to: ISSRFSRNCRMEDSSCSSCRSCL*TSRTMK
Trigger: CTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCA...GCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGGCTGCTGCAGGTCTTaGTTGTGCACCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAGCCRS*LCTSRT
Trigger: TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCCTCTGGGAAGTTGACTaGTCCCTCAGGCAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: ISSRFSRNCRMEDSSCSSLWEVD*SLRQSS
Trigger: GCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGAG...GCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR GCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGCCTCTCGTGGCCACTaGTCACACCTTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAASRGH*SHLLRL
Trigger: CAGCCTCAGAAGGTGTGAGCAGTGGCCACGAGAGGC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGCCTCTCGTGGCCACTaGTCACACCTTCTGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVASRGH*SHLLRL
Trigger: CAGCCTCAGAAGGTGTGAGCAGTGGCCACGAGAGGC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CATCTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGCACCCTTCCTGTAGTTaGTCAAAAGGTAATCCGACA +
Preference number: 4 (lower is better)
Translates to: HLSLGLFSKSWGPPMWLQHPSCS*SKGNPT
Trigger: TGTCGGATTACCTTTTGACCAACTACAGGAAGGGTG...CTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGAATGGATACGGTGGTTaGCTTCCTCCAGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQNGYGG*LPPVPH
Trigger: GTGAGGGACTGGAGGAAGCCAACCACCGTATCCATT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCAATGGATACGGTGGTTaGCTTCCTCCAGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: ISSRFSRNCRMEDSSCSSNGYGG*LPPVPH
Trigger: GTGAGGGACTGGAGGAAGCCAACCACCGTATCCATT...GCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTCGTCAATGGATACGGTaGTTGGCTTCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTRQWIR*LASSSP
Trigger: GGGACTGGAGGAAGCCAACCACCGTATCCATTGACG...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCCTCTCGCCACTGTTaGGGGGCAGGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSPSRHC*GAGRSP
Trigger: TGGGCTTCTACCTGCCCCCCAACAGTGGCGAGAGGG...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGTGGCTGGGGGCCTCTaGGAAGTTGACTGCTCCCTC +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSVAGGL*EVDCSL
Trigger: GAGGGAGCAGTCAACTTCCCAGAGGCCCCCAGCCAC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGACCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARPMWLQ*FPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGG...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGCCATGGTGAGCTGCTaGGGGTGGGACAAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAAMVSC*GWDKGV
Trigger: TACACCCTTGTCCCACCCCCAGCAGCTCACCATGGC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAATCAGTCCTTCAGCTaGATCATGTTTCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPNQSFS*IMFQAG
Trigger: TCCCGCCTGAAACATGATCCAGCTGAAGGACTGATT...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCACCAGCCTGCCTCTCGTaGCCACTGCTCACACCTTCT +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAPACLS*PLLTPS
Trigger: AGAAGGTGTGAGCAGTGGCCACGAGAGGCAGGCTGG...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGCGAGCAGCGCCTGCTaGACCCACAGCAGCATAGCG +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHASSAC*THSSIA
Trigger: CGCTATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGGATGGCATAGACAATaGCGTCAATGGATACGGTGG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQGWHRQ*RQWIRW
Trigger: CCACCGTATCCATTGACGTCATTGTCTATGCCATCC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGGGGCCGCCGGCGGATaGCCACATAGAACTTCATTT +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAGAAGG*PHRTSF
Trigger: AAATGAAGTTCTATGTGGTCATCCGCCGGCGGCCCC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CACTCAAGCGTACTGCCAGATGGACCAGAGCATAACCAGGGTGATGCTGTAGGCGCGTGTCAGAAACGATaGTCAGGAAGACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: HSSVLPDGPEHNQGDAVGACQKR*SGRPSS
Trigger: GCTACTCGGTCTTCCTGATCATCGTTTCTGACACGC...GCCTACAGCATCACCCTGGTTATGCTCTGGTCCATCTGGCAGTACGCTTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR TCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTCAAAGTAGACACCAATaGGAGGAGTGCCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTQSRHQ*EECRWQ
Trigger: CTGCCATCGGCACTCCTCTCATTGGTGTCTACTTTG...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000299961.5
ENST00000375498.6
ENST00000510849.5
CDS-3UTR TCA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTACTTTGTCTGTGTCTTaGAAATGTCCCTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPTLSVS*KCPWHS
Trigger: GGAATGCCAGGGACATTTTCAAGACACAGACAAAGT...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTTAAAGCCATGGTaGGCTGCTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARVLKPW*AAGGGT
Trigger: TGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGATCATCTGATGGGGGATaGGTGTTCAGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARSSDGG*VFREAA
Trigger: GGCAGCTTCCCTGAACACTCATCCCCCATCAGATGA...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGACGCTTTTCCAGGAATTaGCGGATGGAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARRFSRN*RMEDSS
Trigger: GGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCG...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATATGTCCCAGCCAGCCTaGCTCTCGTGGCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHMSQPA*LSWPLL
Trigger: GAGCAGTGGCCACGAGAGGCAGGCTGGCTGGGACAT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATCCTGGCTTCTCCCTGTaGCAGGAGTGTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHPGFSL*QECGEE
Trigger: CTCCTCCCCACACTCCTGGCACAGGGAGAAGCCAGG...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCACAGACTGAGCTCTGCTaGCAGGAGGGGCCTTACCAA +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAQTELC*QEGPYQ
Trigger: TTGGTAAGGCCCCTCCTGGCAGCAGAGCTCAGTCTG...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGACAAAGTAGACACCTGTaGAGCCCAGGGCAGAGGCAA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARQSRHL*SPGQRQ
Trigger: TTGCCTCTGCCCTGGGCTGCACAGGTGTCTACTTTG...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGCAGAGCGGGCCTGGTaGTGTTTCGGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLAERAW*CFGSSW
Trigger: CCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGCAGAGCGGGCCTGGTaGTGTTTCGGCTCCTCCTGG +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPAERAW*CFGSSW
Trigger: CCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CACCAGCCGCACAATGAAGATGGTCTCGGCCAAACTTATCACCAGCAGAGCCATCGTCAATGGATACGGTaGTTGGCTTCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: HQPHNEDGLGQTYHQQSHRQWIR*LASSSP
Trigger: GGGACTGGAGGAAGCCAACCACCGTATCCATTGACG...ATGGCTCTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGGCTGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp GGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGGGTACCAGATGTAGGTaGTCAGCACCTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: GHLSDLIPLFQELPDGGQGTRCR*SAPDSS
Trigger: AGAAGAATCAGGTGCTGACCACCTACATCTGGTACC...CTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGCACGTACGGGATATTTaGAGACTTCCCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQHVRDI*RLPHIH
Trigger: GTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTG...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTCCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVPMWLQ*FPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGG...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCACTCTTCTCGAAGTCCTaGGGTCCTCCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLALFSKS*GPPMWL
Trigger: CAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAG...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTCGAGGCCTCCCGAGGTaGTGGGGGAGGGCTACATCT +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPRGLPR*WGRATS
Trigger: AGATGTAGCCCTCCCCCACCACCTCGGGAGGCCTCG...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGAATCAGTCCTTCAGCTaGATCATGTTTCAGGCGGGA +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLNQSFS*IMFQAG
Trigger: TCCCGCCTGAAACATGATCCAGCTGAAGGACTGATT...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR CCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCAGCCTGCCTCTCGTaGCCACTGCTCACACCTTCT +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSPACLS*PLLTPS
Trigger: AGAAGGTGTGAGCAGTGGCCACGAGAGGCAGGCTGG...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGCGAGCAGCGCCTGCTaGACCCACAGCAGCATAGCG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKASSAC*THSSIA
Trigger: CGCTATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGGACCTATGCATTCATTaGCAGGAAAGCAGAGATCTG +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLDLCIH*QESRDL
Trigger: CAGATCTCTGCTTTCCTGTCAATGAATGCATAGGTC...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS-3UTR TCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGGATGGACAACTTGGTaGTGTTGTCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQGWTTW*CCQSPQ
Trigger: CTGAGGACTTTGACAACATCACCAAGTTGTCCATCC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKLSRTR*RSQAGT
Trigger: CGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCATCTGATGGGGGATaGGTGTTCAGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVSSDGG*VFREAA
Trigger: GGCAGCTTCCCTGAACACTCATCCCCCATCAGATGA...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCATCATCTGATGGGGGATaGGTGTTCAGGGAAGCTGCC +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLASSDGG*VFREAA
Trigger: GGCAGCTTCCCTGAACACTCATCCCCCATCAGATGA...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPMEDSS*SSPHTA
Trigger: GGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCAT...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTATGGAGGACAGCTCCTaGAGCAGCCCACACACCGCC +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPMEDSS*SSPHTA
Trigger: GGCGGTGTGTGGGCTGCTGCAGGAGCTGTCCTCCAT...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTCGCTTTTCCAGGAATTaGCGGATGGAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVRFSRN*RMEDSS
Trigger: GGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCG...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTAGGAGTGCCTCCGAGTaGTCAGGACGAGGCCCACCA +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPRSASE*SGRGPP
Trigger: TGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCCT...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTCCTGGCTTCTCCCTGTaGCAGGAGTGTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPPGFSL*QECGEE
Trigger: CTCCTCCCCACACTCCTGGCACAGGGAGAAGCCAGG...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCC +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKSAERA*WCFGSS
Trigger: GGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGA...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TGTAGGCCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGCACGTACGGGATATTTaGAGACTTCCCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: CRPAPLAGKCGIAACPARHVRDI*RLPHIH
Trigger: GTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTG...CCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGGCCTACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTCAGCGAGCAGTTCTaGACATCGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARVSEQF*TSKGKL
Trigger: CAACTTCCCCTTCGATGTCCAGAACTGCTCGCTGAC...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGAGATGTTGATGTCCTaGATGGTGTGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTEMLMS*MVCSQL
Trigger: CAGTTGGCTGCACACCATCCAGGACATCAACATCTC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGGGATTTCACCTTTTCTaGCAAGCGCCACAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLGFHLF*QAPQRD
Trigger: ATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCC...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACCCTCTCGCCACTGTTaGGGGGCAGGTAGAAGCCCA +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLPSRHC*GAGRSP
Trigger: TGGGCTTCTACCTGCCCCCCAACAGTGGCGAGAGGG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLASSHQS*WLGRWL
Trigger: CAGCCACCTCCCAAGCCACCAAGACTGATGACTGCT...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTTGCAGTGGTTTCCCATaGCTGAGCAGTCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTCSGFP*LSSHQS
Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCA...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp TGTAGGCCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGTGCAGTGGTTTCCCATaGCTGAGCAGTCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: CRPAPLAGKCGIAACPARCSGFP*LSSHQS
Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCA...CCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGGCCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGTCCCTGGCATTCCCTaGGTCCTGAGGGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLVPGIP*VLRGLS
Trigger: GCTTAGGCCCCTCAGGACCCAGGGAATGCCAGGGAC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQEGFRP*LVIAEM
Trigger: CATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTCAGCCTCACACTCCCTaGGCCACCAAGGTTGGGGAG +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPQPHTP*ATKVGE
Trigger: CTCCCCAACCTTGGTGGCCCAGGGAGTGTGAGGCTG...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAACTCTCCCTGGTTCATaGAGACACTCCTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARTLPGS*RHSCRI
Trigger: AATCCGACAGGAGTGTCTTCATGAACCAGGGAGAGT...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGATACTGCTTTCCATGCTaGACTCCCGAAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARYCFPC*TPESRA
Trigger: TGCCCTACTTTCGGGAGTTCAGCATGGAAAGCAGTA...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGGGGCCGCCGGCGGATaGCCACATAGAACTTCATTT +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHGAAGG*PHRTSF
Trigger: AAATGAAGTTCTATGTGGTCATCCGCCGGCGGCCCC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCTCTCCAGAACCAGGTaGCGCAGCCAAGCAGGCACG +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLLSRTR*RSQAGT
Trigger: CGTGCCTGCTTGGCTGCGTCACCTGGTTCTGGAGAG...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGGGGCCTCTGGGAAGTTaGCTGCTCCCTCAGGCAAAG +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKGPLGS*LLPQAK
Trigger: CTTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCC...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGTTGGCTTGTGATTGCTaGGATGAATTGGCATTGGAA +
Preference number: 4 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLLACDC*DELALE
Trigger: TTCCAATGCCAATTCATCTCAGCAATCACAAGCCAA...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATACTGCTCACACCTTCTaGGGCTGCAGCCTCACACTC +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHTAHTF*GCSLTL
Trigger: GAGTGTGAGGCTGCAGCCTCAGAAGGTGTGAGCAGT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR TCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGGTTTCTCACCAGACTaGGCTCTGCTGCCAGGAGGG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKGFSPD*ALLPGG
Trigger: CCCTCCTGGCAGCAGAGCTCAGTCTGGTGAGAAACC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTTGTCCGGGACCCAGATaGTGTCCGTGGGGATGGACA +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLCPGPR*CPWGWT
Trigger: TGTCCATCCCCACGGACAGCATCTGGGTCCCGGACA...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCTGCTGCAGGTCTTaGTTGTGCACCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPGCCRS*LCTSRT
Trigger: TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGCTGCTGCAGGTCTTaGTTGTGCACCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLGCCRS*LCTSRT
Trigger: TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGGCTGCTGCAGGTCTTaGTTGTGCACCAGCCGCACA +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKGCCRS*LCTSRT
Trigger: TGTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTCTCTGGGAAGTTGACTaGTCCCTCAGGCAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVLWEVD*SLRQSS
Trigger: GCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGAG...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCACTCTGGGAAGTTGACTaGTCCCTCAGGCAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLALWEVD*SLRQSS
Trigger: GCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGAG...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAAGCTTGCCTGCCCTCTaGCAACCTCATGTCCCAGCC +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKSLPAL*QPHVPA
Trigger: GGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCT...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTAAGGCGAGCAGCGCCTaGTGGACCCACAGCAGCATA +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLKASSA*WTHSSI
Trigger: TATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGCCTT...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTGGCTTCTCCCTGTaGCAGGAGTGTGGGGAGGAG +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLPGFSL*QECGEE
Trigger: CTCCTCCCCACACTCCTGGCACAGGGAGAAGCCAGG...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCACCAGACTGAGCTCTaGTGCCAGGAGGGGCCTTAC +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLHQTEL*CQEGPY
Trigger: GTAAGGCCCCTCCTGGCAGCAGAGCTCAGTCTGGTG...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGTACCAGATGTAGGTaGTCAGCACCTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTGTRCR*SAPDSS
Trigger: AGAAGAATCAGGTGCTGACCACCTACATCTGGTACC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGAGTGCCGATGGCAGTaGCCGGCAGCGTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLECRWQ*PAACQK
Trigger: TTTCTGACACGCTGCCGGCCACTGCCATCGGCACTC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGAGTGCCGATGGCAGTaGCCGGCAGCGTGTCAGAAA +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPECRWQ*PAACQK
Trigger: TTTCTGACACGCTGCCGGCCACTGCCATCGGCACTC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSSSHQS*WLGRWL
Trigger: CAGCCACCTCCCAAGCCACCAAGACTGATGACTGCT...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGAGATGAATTGGCATTaGAAACAGGGCACGGGACTT +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTEMNWH*KQGTGL
Trigger: AAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGGCCATGGTGAGCTGCTaGGGGTGGGACAAGGGTGTA +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKAMVSC*GWDKGV
Trigger: TACACCCTTGTCCCACCCCCAGCAGCTCACCATGGC...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATCTGGGCCACCAAGGTTaGGGAGCTGCCAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHLGHQG*GAAKFS
Trigger: GGAAAACTTGGCAGCTCCCCAACCTTGGTGGCCCAG...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACCAGCCTGCCTCTCGTaGCCACTGCTCACACCTTCT +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLPACLS*PLLTPS
Trigger: AGAAGGTGTGAGCAGTGGCCACGAGAGGCAGGCTGG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGGGGCCGCCGGCGGATaGCCACATAGAACTTCATTT +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKGAAGG*PHRTSF
Trigger: AAATGAAGTTCTATGTGGTCATCCGCCGGCGGCCCC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGGGGCCGCCGGCGGATaGCCACATAGAACTTCATTT +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPGAAGG*PHRTSF
Trigger: AAATGAAGTTCTATGTGGTCATCCGCCGGCGGCCCC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCCATGGTaGGCTGCTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHVLKPW*AAGGGT
Trigger: TGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTTGCAGGTCTTGCTTGTaGACCAGCCGCACAATGAAG +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSCRSCL*TSRTMK
Trigger: CTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCA...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGAAGGGCCAGCTTGCCTaGCCTCTGCCAACCTCATGT +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKKGQLA*PLPTSC
Trigger: ACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTT...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAAAGGGCCAGCTTGCCTaGCCTCTGCCAACCTCATGT +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKKGQLA*PLPTSC
Trigger: ACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTT...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCACACGTACGGGATATTTaGAGACTTCCCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAHVRDI*RLPHIH
Trigger: GTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTG...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAACCCATGTGGCTGCAGTaGTTTCCCATGGCTGAGCAG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKPMWLQ*FPMAEQ
Trigger: CTGCTCAGCCATGGGAAACCACTGCAGCCACATGGG...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACTCTTCTCGAAGTCCTaGGGTCCTCCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLLFSKS*GPPMWL
Trigger: CAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAACTCTTCTCGAAGTCCTaGGGTCCTCCCATGTGGCTG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKLFSKS*GPPMWL
Trigger: CAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAG...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCCAGGAATTGCCGGATaGAGGACAGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLPGIAG*RTAPAA
Trigger: TGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGG...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTCCAGGAATTGCCGGATaGAGGACAGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPPGIAG*RTAPAA
Trigger: TGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGG...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTCCAGGAATTGCCGGATaGAGGACAGCTCCTGCAGCA +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPPGIAG*RTAPAA
Trigger: TGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGG...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLATPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACTGGGCCACCAAGGTTaGGGAGCTGCCAAGTTTTCC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLLGHQG*GAAKFS
Trigger: GGAAAACTTGGCAGCTCCCCAACCTTGGTGGCCCAG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
3UTR CAA 72 bp TGGGACAAGGGTGTAAGGGCCTTGAACACCCAGTTTTaGGTGGAAGGGTTCAGACCTTGGCTTGTGATTGCT +
Preference number: 4 (lower is better)
Translates to: WDKGVRALNTQF*VEGFRPWLVIA
Trigger: AGCAATCACAAGCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTTGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGGATGGACAACTTGGTaGTGTTGTCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAGWTTW*CCQSPQ
Trigger: CTGAGGACTTTGACAACATCACCAAGTTGTCCATCC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGTGTGCAGCCAACTGGTaGAGGTCAGCGAGCAGTTCT +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKCAANW*RSASSS
Trigger: AGAACTGCTCGCTGACCTTCACCAGTTGGCTGCACA...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGTTTTAAAGCCATGGTaGGCTGCTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLVLKPW*AAGGGT
Trigger: TGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGTTTTAAAGCCATGGTaGGCTGCTGGGGGTGGGACA +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLVLKPW*AAGGGT
Trigger: TGTCCCACCCCCAGCAGCTCACCATGGCTTTAAAAC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGATGCCCGAGTTTCTCCTaGTCTAAGACAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARCPSFS*SKTACF
Trigger: AAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCA...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATATGTCCTGGATGGTGTaGAGCCAACTGGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHMSWMV*SQLVKV
Trigger: GACCTTCACCAGTTGGCTGCACACCATCCAGGACAT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACGCTTTTCCAGGAATTaGCGGATGGAGGACAGCTCC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLRFSRN*RMEDSS
Trigger: GGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCAAGGTTGGGGAGCTaGCAAGTTTTCCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSPRLGS*QVFLQS
Trigger: TGATTGCAGGAAAACTTGGCAGCTCCCCAACCTTGG...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATAATGGATACGGTGGTTaGCTTCCTCCAGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHNGYGG*LPPVPH
Trigger: GTGAGGGACTGGAGGAAGCCAACCACCGTATCCATT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCGTCAATGGATACGGTaGTTGGCTTCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKRQWIR*LASSSP
Trigger: GGGACTGGAGGAAGCCAACCACCGTATCCATTGACG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCGTCAATGGATACGGTaGTTGGCTTCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLRQWIR*LASSSP
Trigger: GGGACTGGAGGAAGCCAACCACCGTATCCATTGACG...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTCGTCAATGGATACGGTaGTTGGCTTCCTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPRQWIR*LASSSP
Trigger: GGGACTGGAGGAAGCCAACCACCGTATCCATTGACG...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTCAGCGAGCAGTTCTaGACATCGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHVSEQF*TSKGKL
Trigger: CAACTTCCCCTTCGATGTCCAGAACTGCTCGCTGAC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGGATGGACAACTTGGTaGTGTTGTCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSGWTTW*CCQSPQ
Trigger: CTGAGGACTTTGACAACATCACCAAGTTGTCCATCC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATACTCTCCCTGGTTCATaGAGACACTCCTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHTLPGS*RHSCRI
Trigger: AATCCGACAGGAGTGTCTTCATGAACCAGGGAGAGT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATTACTGCTTTCCATGCTaGACTCCCGAAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHYCFPC*TPESRA
Trigger: TGCCCTACTTTCGGGAGTTCAGCATGGAAAGCAGTA...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGCGTGTCAGAAACGATaGTCAGGAAGACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLACQKR*SGRPSS
Trigger: GCTACTCGGTCTTCCTGATCATCGTTTCTGACACGC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCAAAGTAGACACCAATaGGAGGAGTGCCGATGGCAG +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKQSRHQ*EECRWQ
Trigger: CTGCCATCGGCACTCCTCTCATTGGTGTCTACTTTG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000299961.5
ENST00000375498.6
CDS-3UTR GCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAATGTCCTGGATGGTGTaGAGCCAACTGGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKMSWMV*SQLVKV
Trigger: GACCTTCACCAGTTGGCTGCACACCATCCAGGACAT...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGATGTCCTGGATGGTGTaGAGCCAACTGGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKMSWMV*SQLVKV
Trigger: GACCTTCACCAGTTGGCTGCACACCATCCAGGACAT...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAATGTCCTGGATGGTGTaGAGCCAACTGGTGAAGGTC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLMSWMV*SQLVKV
Trigger: GACCTTCACCAGTTGGCTGCACACCATCCAGGACAT...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTTGCAGGTCTTGCTTGTaGACCAGCCGCACAATGAAG +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLCRSCL*TSRTMK
Trigger: CTTCATTGTGCGGCTGGTGCACAAGCAAGACCTGCA...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCTCTGGGAAGTTGACTaGTCCCTCAGGCAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKLWEVD*SLRQSS
Trigger: GCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGAG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACTCTGGGAAGTTGACTaGTCCCTCAGGCAAAGTAGC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLLWEVD*SLRQSS
Trigger: GCTACTTTGCCTGAGGGAGCAGTCAACTTCCCAGAG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACCCACTCAAGCGTACTaGCAGATGGACCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLPTQAY*QMDQSI
Trigger: TATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCCCACTCAAGCGTACTaGCAGATGGACCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKPTQAY*QMDQSI
Trigger: TATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTCCCACTCAAGCGTACTaGCAGATGGACCAGAGCATA +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPPTQAY*QMDQSI
Trigger: TATGCTCTGGTCCATCTGGCAGTACGCTTGAGTGGG...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAAATGGATACGGTGGTTaGCTTCCTCCAGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLNGYGG*LPPVPH
Trigger: GTGAGGGACTGGAGGAAGCCAACCACCGTATCCATT...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTAATGGATACGGTGGTTaGCTTCCTCCAGTCCCTCAC +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLNGYGG*LPPVPH
Trigger: GTGAGGGACTGGAGGAAGCCAACCACCGTATCCATT...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGTCAGCGAGCAGTTCTaGACATCGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPVSEQF*TSKGKL
Trigger: CAACTTCCCCTTCGATGTCCAGAACTGCTCGCTGAC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGTCAGCGAGCAGTTCTaGACATCGAAGGGGAAGTTG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKVSEQF*TSKGKL
Trigger: CAACTTCCCCTTCGATGTCCAGAACTGCTCGCTGAC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGAGCAGTCATCAGTCTTaGTGGCTTGGGAGGTGGCTG +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLSSHQS*WLGRWL
Trigger: CAGCCACCTCCCAAGCCACCAAGACTGATGACTGCT...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGGATGGCATAGACAATaGCGTCAATGGATACGGTGG +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPGWHRQ*RQWIRW
Trigger: CCACCGTATCCATTGACGTCATTGTCTATGCCATCC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGGATGGCATAGACAATaGCGTCAATGGATACGGTGG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKGWHRQ*RQWIRW
Trigger: CCACCGTATCCATTGACGTCATTGTCTATGCCATCC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTACTCTCCCTGGTTCATaGAGACACTCCTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLTLPGS*RHSCRI
Trigger: AATCCGACAGGAGTGTCTTCATGAACCAGGGAGAGT...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAACTCTCCCTGGTTCATaGAGACACTCCTGTCGGATT +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKTLPGS*RHSCRI
Trigger: AATCCGACAGGAGTGTCTTCATGAACCAGGGAGAGT...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGTACTGCTTTCCATGCTaGACTCCCGAAAGTAGGGCA +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKYCFPC*TPESRA
Trigger: TGCCCTACTTTCGGGAGTTCAGCATGGAAAGCAGTA...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGGCGTGTCAGAAACGATaGTCAGGAAGACCGAGTAGC +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLACQKR*SGRPSS
Trigger: GCTACTCGGTCTTCCTGATCATCGTTTCTGACACGC...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTTGGCTTGTGATTGCTaGGATGAATTGGCATTGGAA +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVLACDC*DELALE
Trigger: TTCCAATGCCAATTCATCTCAGCAATCACAAGCCAA...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTTGCCCGAGTTTCTCCTaGTCTAAGACAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSCPSFS*SKTACF
Trigger: AAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCA...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR GCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGCTGCCAAGTTTTCCTaGAATCAGTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLAAKFS*NQSFSW
Trigger: CCAGCTGAAGGACTGATTGCAGGAAAACTTGGCAGC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR GCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGCTGCCAAGTTTTCCTaGAATCAGTCCTTCAGCTGG +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPAAKFS*NQSFSW
Trigger: CCAGCTGAAGGACTGATTGCAGGAAAACTTGGCAGC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR GCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCCAAGGTTGGGGAGCTaGCAAGTTTTCCTGCAATCA +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLPRLGS*QVFLQS
Trigger: TGATTGCAGGAAAACTTGGCAGCTCCCCAACCTTGG...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTAGCAGAGATCTGGCTTaGAAGAGCAAGTGGCACAAG +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPSRDLA*KSKWHK
Trigger: CTTGTGCCACTTGCTCTTCCAAGCCAGATCTCTGCT...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGGTACCAGATGTAGGTaGTCAGCACCTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHGTRCR*SAPDSS
Trigger: AGAAGAATCAGGTGCTGACCACCTACATCTGGTACC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACACGTACGGGATATTTaGAGACTTCCCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLHVRDI*RLPHIH
Trigger: GTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTCACGTACGGGATATTTaGAGACTTCCCCACATCCAC +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPHVRDI*RLPHIH
Trigger: GTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTG...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGAGATGTTGATGTCCTaGATGGTGTGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLEMLMS*MVCSQL
Trigger: CAGTTGGCTGCACACCATCCAGGACATCAACATCTC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGAGATGTTGATGTCCTaGATGGTGTGCAGCCAACTG +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLEMLMS*MVCSQL
Trigger: CAGTTGGCTGCACACCATCCAGGACATCAACATCTC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTAACTCCCACTCTCCCTaGTTCATGAAGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLNSHSP*FMKTLL
Trigger: CAGGAGTGTCTTCATGAACCAGGGAGAGTGGGAGTT...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTAACTCCCACTCTCCCTaGTTCATGAAGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPNSHSP*FMKTLL
Trigger: CAGGAGTGTCTTCATGAACCAGGGAGAGTGGGAGTT...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAAACTCCCACTCTCCCTaGTTCATGAAGACACTCCTG +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLNSHSP*FMKTLL
Trigger: CAGGAGTGTCTTCATGAACCAGGGAGAGTGGGAGTT...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTTGCAGTGGTTTCCCATaGCTGAGCAGTCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPCSGFP*LSSHQS
Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCA...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAATGCAGTGGTTTCCCATaGCTGAGCAGTCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKCSGFP*LSSHQS
Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCA...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGTGCAGTGGTTTCCCATaGCTGAGCAGTCATCAGTCT +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKCSGFP*LSSHQS
Trigger: AGACTGATGACTGCTCAGCCATGGGAAACCACTGCA...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHEGFRP*LVIAEM
Trigger: CATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLTPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTACACCCAGTTTTTGGTaGAAGGGTTCAGACCTTGGC +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPTPSFW*KGSDLG
Trigger: GCCAAGGTCTGAACCCTTCCACCAAAAACTGGGTGT...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTTGTGTAGTAGAGAGTTaGTTTTGCCTTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTCVVES*FCLQPK
Trigger: TTTAGGTTGAAGGCAAAACCAACTCTCTACTACACA...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGATGGACAACTTGGTaGTGTTGTCAAAGTCCTCAG +
Preference number: 4 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPGWTTW*CCQSPQ
Trigger: CTGAGGACTTTGACAACATCACCAAGTTGTCCATCC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATCACCCTTCCTGTAGTTaGTCAAAAGGTAATCCGACA +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHHPSCS*SKGNPT
Trigger: TGTCGGATTACCTTTTGACCAACTACAGGAAGGGTG...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGGTACCAGATGTAGGTaGTCAGCACCTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPGTRCR*SAPDSS
Trigger: AGAAGAATCAGGTGCTGACCACCTACATCTGGTACC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGGATTTCACCTTTTCTaGCAAGCGCCACAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHGFHLF*QAPQRD
Trigger: ATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAGAAGGGTTCAGACCTTaGCTTGTGATTGCTGAGATG +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKEGFRP*LVIAEM
Trigger: CATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTC...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGATGTGTAGTAGAGAGTTaGTTTTGCCTTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: VRVNGEKSTTRVDLGSARCVVES*FCLQPK
Trigger: TTTAGGTTGAAGGCAAAACCAACTCTCTACTACACA...TCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTTGCCCGAGTTTCTCCTaGTCTAAGACAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LVQSYQACVVESWFCLQPCPSFS*SKTACF
Trigger: AAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCA...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCACCCTTCCTGTAGTTaGTCAAAAGGTAATCCGACA +
Preference number: 4 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKHPSCS*SKGNPT
Trigger: TGTCGGATTACCTTTTGACCAACTACAGGAAGGGTG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAACACCCTTCCTGTAGTTaGTCAAAAGGTAATCCGACA +
Preference number: 4 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKHPSCS*SKGNPT
Trigger: TGTCGGATTACCTTTTGACCAACTACAGGAAGGGTG...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACACCCTTCCTGTAGTTaGTCAAAAGGTAATCCGACA +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLHPSCS*SKGNPT
Trigger: TGTCGGATTACCTTTTGACCAACTACAGGAAGGGTG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGGGTACCAGATGTAGGTaGTCAGCACCTGATTCTTCT +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLGTRCR*SAPDSS
Trigger: AGAAGAATCAGGTGCTGACCACCTACATCTGGTACC...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGATTTCACCTTTTCTaGCAAGCGCCACAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLGFHLF*QAPQRD
Trigger: ATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGGAGATGAATTGGCATTaGAAACAGGGCACGGGACTT +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLEMNWH*KQGTGL
Trigger: AAGTCCCGTGCCCTGTTTCCAATGCCAATTCATCTC...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTGTGTAGTAGAGAGTTaGTTTTGCCTTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVCVVES*FCLQPK
Trigger: TTTAGGTTGAAGGCAAAACCAACTCTCTACTACACA...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGACTTTGTCTGTGTCTTaGAAATGTCCCTGGCATTCC +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLTLSVS*KCPWHS
Trigger: GGAATGCCAGGGACATTTTCAAGACACAGACAAAGT...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR TCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGTGCCCGAGTTTCTCCTaGTCTAAGACAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLCPSFS*SKTACF
Trigger: AAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCA...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGGGATTTCACCTTTTCTaGCAAGCGCCACAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: LEKPRTELSGLCSRELVLGFHLF*QAPQRD
Trigger: ATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCC...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CCA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTTGTGTAGTAGAGAGTTaGTTTTGCCTTCAACCTAAA +
Preference number: 4 (lower is better)
Translates to: RSLVQSYQACVVESWFCLCVVES*FCLQPK
Trigger: TTTAGGTTGAAGGCAAAACCAACTCTCTACTACACA...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS GCA 90 bp TGCCTCCGAGTGCTCAGGACGAGGCCCACCAAGGGCCAGCTTGCCTaGCCTCTGCCAACCTCATGTCCCAGCCAGCCTGCCTCTCGTGGC +
Preference number: 5 (lower is better)
Translates to: CLRVLRTRPTKGQLA*PLPTSCPSQPASRG
Trigger: GCCACGAGAGGCAGGCTGGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTTGGTGGGCCTCGTCCTGAGCACTCGGAGGCA
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS GCA 90 bp GGAGTGCCTCCGAGTGCTCAGGACGAGGCCCACCAAGGGCCAGCTTaGCTGCCCTCTGCCAACCTCATGTCCCAGCCAGCCTGCCTCTCG +
Preference number: 5 (lower is better)
Translates to: GVPPSAQDEAHQGPA*LPSANLMSQPACLS
Trigger: CGAGAGGCAGGCTGGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTTGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS GCA 90 bp GAGTGCTCAGGACGAGGCCCACCAAGGGCCAGCTTGCCTGCCCTCTaGCAACCTCATGTCCCAGCCAGCCTGCCTCTCGTGGCCACTGCT +
Preference number: 5 (lower is better)
Translates to: ECSGRGPPRASLPAL*QPHVPASLPLVATA
Trigger: AGCAGTGGCCACGAGAGGCAGGCTGGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTTGGTGGGCCTCGTCCTGAGCACTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS GCA 90 bp CCACAGCAGCATAGCGAGCTTTCCAAGCATAGGAGTGCCTCCGAGTaGTCAGGACGAGGCCCACCAAGGGCCAGCTTGCCTGCCCTCTGC +
Preference number: 5 (lower is better)
Translates to: PQQHSELSKHRSASE*SGRGPPRASLPALC
Trigger: GCAGAGGGCAGGCAAGCTGGCCCTTGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCCTATGCTTGGAAAGCTCGCTATGCTGCTGTGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS GCA 90 bp AGGGATGGTCACAGGCAGCCCCCTCCATCTCCAGTGAGGGTCGCCTaGAACTCAGGCAGACTTCACCCTCAGTGCCCAGGCAACAGGTGG +
Preference number: 5 (lower is better)
Translates to: RDGHRQPPPSPVRVA*NSGRLHPQCPGNRW
Trigger: CCACCTGTTGCCTGGGCACTGAGGGTGAAGTCTGCCTGAGTTGCAGGCGACCCTCACTGGAGATGGAGGGGGCTGCCTGTGACCATCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS GCA 90 bp TCTCCCTGTGCCAGGAGTGTGGGGAGGAGCAAGGCGAGCAGCGCCTaGTGGACCCACAGCAGCATAGCGAGCTTTCCAAGCATAGGAGTG +
Preference number: 5 (lower is better)
Translates to: SPCARSVGRSKASSA*WTHSSIASFPSIGV
Trigger: CACTCCTATGCTTGGAAAGCTCGCTATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGCCTTGCTCCTCCCCACACTCCTGGCACAGGGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp GGTGGGGGAGGGCTACATCTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTATGTGGAATAGCAGCTaGTCCAGCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: GGGGLHLSLGLFSKSWGPMWNSS*SSTEPT
Trigger: CGTGGGCTCCGTGCTGGACAAGCTGCTATTCCACAT...AGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATGTAGCCCTCCCCCACC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS CCA 90 bp GCCTGCAACTCAGGCAGACTTCACCCTCAGTGCCCAGGCAACAGGTaGGCATCTTCCTGGGAGAAGCTGGTGTCAGTGGCGCCCAATTCC +
Preference number: 5 (lower is better)
Translates to: ACNSGRLHPQCPGNR*ASSWEKLVSVAPNS
Trigger: GGAATTGGGCGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGTGAAGTCTGCCTGAGTTGCAGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS-3UTR CAA 90 bp TCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCCCACACGGGGCCTCTGGGAAGTaGACTGCTCCCTCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: SRFSRNCRMEDSSCSSPHGASGK*TAPSGK
Trigger: TTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCCC...GTGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS GCA 90 bp TCTCCAGTGAGGGTCGCCTGCAACTCAGGCAGACTTCACCCTCAGTaGCCAGGCAACAGGTGGGCATCTTCCTGGGAGAAGCTGGTGTCA +
Preference number: 5 (lower is better)
Translates to: SPVRVACNSGRLHPQ*PGNRWASSWEKLVS
Trigger: TGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGTGAAGTCTGCCTGAGTTGCAGGCGACCCTCACTGGAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS CCA 90 bp AGTTGGTCAAAAGGTAATCCGACAGCCTCAGCAGAGCGGGCCTGGTaGTGTTTCGGCTCCTCCTGGCTTCTCCCTGTGCCAGGAGTGTGG +
Preference number: 5 (lower is better)
Translates to: SWSKGNPTASAERAW*CFGSSWLLPVPGVW
Trigger: CCACACTCCTGGCACAGGGAGAAGCCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGAGGCTGTCGGATTACCTTTTGACCAACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS CCA 90 bp ACCCTCAGTGCCCAGGCAACAGGTGGGCATCTTCCTGGGAGAAGCTaGTGTCAGTGGCGCCCAATTCCCTCAGCAGTAACTGAGAGTCCC +
Preference number: 5 (lower is better)
Translates to: TLSAQATGGHLPGRS*CQWRPIPSAVTESP
Trigger: GGGACTCTCAGTTACTGCTGAGGGAATTGGGCGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS CCA 90 bp GGCAGACTTCACCCTCAGTGCCCAGGCAACAGGTGGGCATCTTCCTaGGAGAAGCTGGTGTCAGTGGCGCCCAATTCCCTCAGCAGTAAC +
Preference number: 5 (lower is better)
Translates to: GRLHPQCPGNRWASS*EKLVSVAPNSLSSN
Trigger: GTTACTGCTGAGGGAATTGGGCGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGTGAAGTCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS-3UTR CAA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCAC +
Preference number: 5 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTGLLQV*LVHQPH
Trigger: GTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTGAGCAGTCATCAGTCTaGGTGGCTTGGGAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPEQSSV*VAWEVA
Trigger: AGCCACCTCCCAAGCCACCAAGACTGATGACTGCTC...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS CCA 90 bp TGTAGTTGGTCAAAAGGTAATCCGACAGCCTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCCTGGCTTCTCCCTGTGCCAGGAGTG +
Preference number: 5 (lower is better)
Translates to: CSWSKGNPTASAERA*WCFGSSWLLPVPGV
Trigger: CACTCCTGGCACAGGGAGAAGCCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGAGGCTGTCGGATTACCTTTTGACCAACTACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTCAATGGATACGGTGGTaGGCTTCCTCCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPQWIRW*ASSSPS
Trigger: TGAGGGACTGGAGGAAGCCAACCACCGTATCCATTG...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGTGGACACGTACGGGATATTaGGAGACTTCCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: LSLGLFSKSWGPPMWLQWTRTGY*ETSPHP
Trigger: TGGATGTGGGGAAGTCTCCAAATATCCCGTACGTGT...CCACTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGTGCTGCAGGTCTTGCTaGTGCACCAGCCGCACAATG +
Preference number: 5 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLCCRSC*CTSRTM
Trigger: CATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCA...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGGGGCCTCTGGGAAGTaGACTGCTCCCTCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQGASGK*TAPSGK
Trigger: TTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCCC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GGCCACCTCTCGGATCTCATCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGGAGCAGTCATCAGTCTaGGTGGCTTGGGAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GHLSDLIPLFQELPDGGQEQSSV*VAWEVA
Trigger: AGCCACCTCCCAAGCCACCAAGACTGATGACTGCTC...CTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGATGAGATCCGAGAGGTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGATGTGGAATAGCAGCTaGTCCAGCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLMWNSS*SSTEPT
Trigger: CGTGGGCTCCGTGCTGGACAAGCTGCTATTCCACAT...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGATGTGGAATAGCAGCTaGTCCAGCACGGAGCCCACG +
Preference number: 5 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQMWNSS*SSTEPT
Trigger: CGTGGGCTCCGTGCTGGACAAGCTGCTATTCCACAT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPVGMDN*VMLSKS
Trigger: GGACTTTGACAACATCACCAAGTTGTCCATCCCCAC...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp TCCCGCTTTTCCAGGAATTGCCGGATGGAGGACAGCTCCTGCAGCAGCCCACACGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: SRFSRNCRMEDSSCSSPHVGMDN*VMLSKS
Trigger: GGACTTTGACAACATCACCAAGTTGTCCATCCCCAC...GTGTGGGCTGCTGCAGGAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCAC +
Preference number: 5 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSGLLQV*LVHQPH
Trigger: GTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp TGTAGGCCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGCCGCTTTTCCAGGAATaGCCGGATGGAGGACAGCTC +
Preference number: 5 (lower is better)
Translates to: CRPAPLAGKCGIAACPARPLFQE*PDGGQL
Trigger: GAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGG...CCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGGCCTACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS GCA 90 bp TCACACTCCCTGGGCCACCAAGGTTGGGGAGCTGCCAAGTTTTCCTaGAATCAGTCCTTCAGCTGGATCATGTTTCAGGCGGGAGGAAAG +
Preference number: 5 (lower is better)
Translates to: SHSLGHQGWGAAKFS*NQSFSWIMFQAGGK
Trigger: CTTTCCTCCCGCCTGAAACATGATCCAGCTGAAGGACTGATTGCAGGAAAACTTGGCAGCTCCCCAACCTTGGTGGCCCAGGGAGTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS CCA 90 bp CACGTTGAGGATGGCATAGACAATGACGTCAATGGATACGGTGGTTaGCTTCCTCCAGTCCCTCACGGGGCGCACACCCTTCCTGTAGTT +
Preference number: 5 (lower is better)
Translates to: HVEDGIDNDVNGYGG*LPPVPHGAHTLPVV
Trigger: AACTACAGGAAGGGTGTGCGCCCCGTGAGGGACTGGAGGAAGCCAACCACCGTATCCATTGACGTCATTGTCTATGCCATCCTCAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGACATCCACGAACTCATaGATGAGAATGTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLTSTNS*MRMSGT
Trigger: GGTCCCGGACATTCTCATCAATGAGTTCGTGGATGT...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp CATCTGTCCCTCGGGCTCTTCTCGAAGTCCTGGGGTCCTCCCATGTGGCTGCAGGTTCTGAACTTCGCCTaGATGCCGAATATACACGTA +
Preference number: 5 (lower is better)
Translates to: HLSLGLFSKSWGPPMWLQVLNFA*MPNIHV
Trigger: TACGTGTATATTCGGCATCAAGGCGAAGTTCAGAAC...CTGCAGCCACATGGGAGGACCCCAGGACTTCGAGAAGAGCCCGAGGGACAGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGAGGAGGAGTGTAATCTaGAAAGAGACCCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLRRSVI*KETLSP
Trigger: TGGCGAGAGGGTCTCTTTCAAGATTACACTCCTCCT...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp CCGCACAATGAAGATGGTCTCGGCCAAACTTATCACCAGCAGAGCCATGCACACTGCTGCAGGTCTTGCTaGTGCACCAGCCGCACAATG +
Preference number: 5 (lower is better)
Translates to: PHNEDGLGQTYHQQSHAHCCRSC*CTSRTM
Trigger: CATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCA...GTGTGCATGGCTCTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGGGGCCTCTGGGAAGTaGACTGCTCCCTCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVGASGK*TAPSGK
Trigger: TTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCCC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CCTGGCATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTTTGAACACCCAGTTTTaGGTGGAAGGGTTCAGACCT +
Preference number: 5 (lower is better)
Translates to: PGIPWVLRGLSRNPLSPPLNTQF*VEGFRP
Trigger: AGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAA...AGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAATGCCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS CCA 90 bp AGTTGGTCAAAAGGTAATCCGACAGCCTCAGCAGAGCGGGCCTGGTaGTGTTTCGGCTCCTCCTGGCTTGTAGAAAGGACCTATGCATTC +
Preference number: 5 (lower is better)
Translates to: SWSKGNPTASAERAW*CFGSSWLVERTYAF
Trigger: GAATGCATAGGTCCTTTCTACAAGCCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGAGGCTGTCGGATTACCTTTTGACCAACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS CCA 90 bp TGTAGTTGGTCAAAAGGTAATCCGACAGCCTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCCTGGCTTGTAGAAAGGACCTATGCA +
Preference number: 5 (lower is better)
Translates to: CSWSKGNPTASAERA*WCFGSSWLVERTYA
Trigger: TGCATAGGTCCTTTCTACAAGCCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGAGGCTGTCGGATTACCTTTTGACCAACTACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS-3UTR CAA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQVGMDN*VMLSKS
Trigger: GGACTTTGACAACATCACCAAGTTGTCCATCCCCAC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGACACGTACGGGATATTaGGAGACTTCCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQTRTGY*ETSPHP
Trigger: TGGATGTGGGGAAGTCTCCAAATATCCCGTACGTGT...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CCAGCACCGCTAGCAGGTAAATGTGGAATAGCAGCTTGTCCAGCACGGAGCCCAAGGAGGAGTGTAATCTaGAAAGAGACCCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: PAPLAGKCGIAACPARSPRRSVI*KETLSP
Trigger: TGGCGAGAGGGTCTCTTTCAAGATTACACTCCTCCT...TGGGCTCCGTGCTGGACAAGCTGCTATTCCACATTTACCTGCTAGCGGTGCTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCAC +
Preference number: 5 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLGLLQV*LVHQPH
Trigger: GTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGGCTGCTGCAGGTCTaGCTTGTGCACCAGCCGCAC +
Preference number: 5 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPGLLQV*LVHQPH
Trigger: GTGCGGCTGGTGCACAAGCAAGACCTGCAGCAGCCC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCACCGCTTTTCCAGGAATaGCCGGATGGAGGACAGCTC +
Preference number: 5 (lower is better)
Translates to: GIGNRARDFVCVLKMSLAPLFQE*PDGGQL
Trigger: GAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGG...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGGGCTGTTGAACACCCAGTTTTaGGTGGAAGGGTTCAGACCT +
Preference number: 5 (lower is better)
Translates to: RNPLSPPNQDCTPSSTGLLNTQF*VEGFRP
Trigger: AGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAA...CAGCCCAGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTCAATGGATACGGTGGTaGGCTTCCTCCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVQWIRW*ASSSPS
Trigger: TGAGGGACTGGAGGAAGCCAACCACCGTATCCATTG...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTACATCCACGAACTCATaGATGAGAATGTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTTSTNS*MRMSGT
Trigger: GGTCCCGGACATTCTCATCAATGAGTTCGTGGATGT...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTAGGAGGAGTGTAATCTaGAAAGAGACCCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTRRSVI*KETLSP
Trigger: TGGCGAGAGGGTCTCTTTCAAGATTACACTCCTCCT...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGAGCAGTCATCAGTCTaGGTGGCTTGGGAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSEQSSV*VAWEVA
Trigger: AGCCACCTCCCAAGCCACCAAGACTGATGACTGCTC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTAAGGGTGTAAGGGCCTaGAACACCCAGTTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTKGVRA*NTQFLV
Trigger: CACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTT...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCAATGGATACGGTGGTaGGCTTCCTCCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSQWIRW*ASSSPS
Trigger: TGAGGGACTGGAGGAAGCCAACCACCGTATCCATTG...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp ATTCCCTGGGTCCTGAGGGGCCTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGTTCTGAACTTCGCCTaGATGCCGAATATACACGTA +
Preference number: 5 (lower is better)
Translates to: IPWVLRGLSRNPLSPPNQVLNFA*MPNIHV
Trigger: TACGTGTATATTCGGCATCAAGGCGAAGTTCAGAAC...CTGGTTAGGTGGGGACAGAGGATTTCTGCTTAGGCCCCTCAGGACCCAGGGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATTGCTGCAGGTCTTGCTaGTGCACCAGCCGCACAATG +
Preference number: 5 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHCCRSC*CTSRTM
Trigger: CATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCA...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGGGCCTCTGGGAAGTaGACTGCTCCCTCAGGCAAA +
Preference number: 5 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPGASGK*TAPSGK
Trigger: TTTGCCTGAGGGAGCAGTCAACTTCCCAGAGGCCCC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS CCA 90 bp CTCTCCCTGGTTCATGAAGACACTCCTGTCGGATTTCACCTTTTCTaGCAAGCGCCACAAAGAGATGTTGATGTCCTGGATGGTGTGCAG +
Preference number: 5 (lower is better)
Translates to: LSLVHEDTPVGFHLF*QAPQRDVDVLDGVQ
Trigger: CTGCACACCATCCAGGACATCAACATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCCGACAGGAGTGTCTTCATGAACCAGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
CDS-3UTR CAA 90 bp CCGCACAATGAAGATGGTCTCGGCCAAACTTATCACCAGCAGAGCCATGCACACGACAACTTGGTGATGTaGTCAAAGTCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: PHNEDGLGQTYHQQSHAHDNLVM*SKSSGF
Trigger: GAACCCTGAGGACTTTGACAACATCACCAAGTTGTC...GTGTGCATGGCTCTGCTGGTGATAAGTTTGGCCGAGACCATCTTCATTGTGCGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTACATCCACGAACTCATaGATGAGAATGTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVTSTNS*MRMSGT
Trigger: GGTCCCGGACATTCTCATCAATGAGTTCGTGGATGT...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAACACGTACGGGATATTaGGAGACTTCCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: GIGNRARDFVCVLKMSLATRTGY*ETSPHP
Trigger: TGGATGTGGGGAAGTCTCCAAATATCCCGTACGTGT...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTAAGCAGAAATCCTCTGTCCCCACCTAACCAGGACTGTACCCCCTCCTCCACTGTTCTGAACTTCGCCTaGATGCCGAATATACACGTA +
Preference number: 5 (lower is better)
Translates to: LSRNPLSPPNQDCTPSSTVLNFA*MPNIHV
Trigger: TACGTGTATATTCGGCATCAAGGCGAAGTTCAGAAC...AGTGGAGGAGGGGGTACAGTCCTGGTTAGGTGGGGACAGAGGATTTCTGCTTAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTATGCTGCAGGTCTTGCTaGTGCACCAGCCGCACAATG +
Preference number: 5 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLCCRSC*CTSRTM
Trigger: CATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCA...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTTGCTGCAGGTCTTGCTaGTGCACCAGCCGCACAATG +
Preference number: 5 (lower is better)
Translates to: LVQSYQACVVESWFCLQPCCRSC*CTSRTM
Trigger: CATTGTGCGGCTGGTGCACAAGCAAGACCTGCAGCA...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGAGCAGTCATCAGTCTaGGTGGCTTGGGAGGTGGCT +
Preference number: 5 (lower is better)
Translates to: RSLVQSYQACVVESWFCLEQSSV*VAWEVA
Trigger: AGCCACCTCCCAAGCCACCAAGACTGATGACTGCTC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCCGCTTTTCCAGGAATaGCCGGATGGAGGACAGCTC +
Preference number: 5 (lower is better)
Translates to: RSLVQSYQACVVESWFCLPLFQE*PDGGQL
Trigger: GAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGG...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAACCGCTTTTCCAGGAATaGCCGGATGGAGGACAGCTC +
Preference number: 5 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKPLFQE*PDGGQL
Trigger: GAGCTGTCCTCCATCCGGCAATTCCTGGAAAAGCGG...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTAAGGGTGTAAGGGCCTaGAACACCCAGTTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVKGVRA*NTQFLV
Trigger: CACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTT...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS TCA 90 bp GTGTTTCGGCTCCTCCTGGCTTGTAGAAAGGACCTATGCATTCATTaGCAGGAAAGCAGAGATCTGGCTTGGAAGAGCAAGTGGCACAAG +
Preference number: 5 (lower is better)
Translates to: VFRLLLACRKDLCIH*QESRDLAWKSKWHK
Trigger: CTTGTGCCACTTGCTCTTCCAAGCCAGATCTCTGCTTTCCTGTCAATGAATGCATAGGTCCTTTCTACAAGCCAGGAGGAGCCGAAACAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS TCA 90 bp CCACATAGAACTTCATTTCTGCATAGTAGTTACTGCTTTCCATGCTaGACTCCCGAAAGTAGGGCAGCACCCCCAGCAACTCCCACTCTC +
Preference number: 5 (lower is better)
Translates to: PHRTSFLHSSYCFPC*TPESRAAPPATPTL
Trigger: GAGAGTGGGAGTTGCTGGGGGTGCTGCCCTACTTTCGGGAGTTCAGCATGGAAAGCAGTAACTACTATGCAGAAATGAAGTTCTATGTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
CDS-3UTR CAA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTACAATGGATACGGTGGTaGGCTTCCTCCAGTCCCTCA +
Preference number: 5 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLQWIRW*ASSSPS
Trigger: TGAGGGACTGGAGGAAGCCAACCACCGTATCCATTG...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGACAACTTGGTGATGTaGTCAAAGTCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVDNLVM*SKSSGF
Trigger: GAACCCTGAGGACTTTGACAACATCACCAAGTTGTC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATACATCCACGAACTCATaGATGAGAATGTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHTSTNS*MRMSGT
Trigger: GGTCCCGGACATTCTCATCAATGAGTTCGTGGATGT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTGTTCTGAACTTCGCCTaGATGCCGAATATACACGTA +
Preference number: 5 (lower is better)
Translates to: RVNGEKSTTRVDLGSARVVLNFA*MPNIHV
Trigger: TACGTGTATATTCGGCATCAAGGCGAAGTTCAGAAC...AACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTCGCCACAAAGAGATGTaGATGTCCTGGATGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LVQSYQACVVESWFCLQPRHKEM*MSWMVC
Trigger: GCACACCATCCAGGACATCAACATCTCTTTGTGGCG...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTTTAAAGCGCCACAAAGAGATGTaGATGTCCTGGATGGTGTGC +
Preference number: 5 (lower is better)
Translates to: VDLGSARVSPDLRQHVLKRHKEM*MSWMVC
Trigger: GCACACCATCCAGGACATCAACATCTCTTTGTGGCG...CTTTAAAACATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGGCAGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: GIGNRARDFVCVLKMSLADFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...TGCCAGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATAAGGGTGTAAGGGCCTaGAACACCCAGTTTTTGGTG +
Preference number: 5 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHKGVRA*NTQFLV
Trigger: CACCAAAAACTGGGTGTTCAAGGCCCTTACACCCTT...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS CCA 90 bp GTTCTGAACTTCGCCTTGATGCCGAATATACACGTACGGGATATTTaGAGACTTCCCCACATCCACGAACTCATTGATGAGAATGTCCGG +
Preference number: 5 (lower is better)
Translates to: VLNFALMPNIHVRDI*RLPHIHELIDENVR
Trigger: CCGGACATTCTCATCAATGAGTTCGTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTGTATATTCGGCATCAAGGCGAAGTTCAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS-3UTR CAA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: LVQSYQACVVESWFCLQPVGMDN*VMLSKS
Trigger: GGACTTTGACAACATCACCAAGTTGTCCATCCCCAC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCC +
Preference number: 5 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPVGMDN*VMLSKS
Trigger: GGACTTTGACAACATCACCAAGTTGTCCATCCCCAC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTACATCCACGAACTCATaGATGAGAATGTCCGGGACC +
Preference number: 5 (lower is better)
Translates to: RSLVQSYQACVVESWFCLTSTNS*MRMSGT
Trigger: GGTCCCGGACATTCTCATCAATGAGTTCGTGGATGT...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GTGGAAGGGTTCAGACCTTGGCTTGTGATTGCTGAGATGAATTGGCATTGGAAAACACGTACGGGATATTaGGAGACTTCCCCACATCCA +
Preference number: 5 (lower is better)
Translates to: VEGFRPWLVIAEMNWHWKTRTGY*ETSPHP
Trigger: TGGATGTGGGGAAGTCTCCAAATATCCCGTACGTGT...TTTCCAATGCCAATTCATCTCAGCAATCACAAGCCAAGGTCTGAACCCTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp TTAGAGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCGCCACAAAGAGATGTaGATGTCCTGGATGGTGTGC +
Preference number: 5 (lower is better)
Translates to: LEKPRTELSGLCSRELVLRHKEM*MSWMVC
Trigger: GCACACCATCCAGGACATCAACATCTCTTTGTGGCG...CAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCTCTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAAGGAGGAGTGTAATCTaGAAAGAGACCCTCTCGCCA +
Preference number: 5 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLRRSVI*KETLSP
Trigger: TGGCGAGAGGGTCTCTTTCAAGATTACACTCCTCCT...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp GTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: VNGEKSTTRVDLGSARVSDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...AGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGACAACTTGGTGATGTaGTCAAAGTCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: RSLVQSYQACVVESWFCLDNLVM*SKSSGF
Trigger: GAACCCTGAGGACTTTGACAACATCACCAAGTTGTC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp CTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTCAACCTGACAACTTGGTGATGTaGTCAAAGTCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: LVQSYQACVVESWFCLQPDNLVM*SKSSGF
Trigger: GAACCCTGAGGACTTTGACAACATCACCAAGTTGTC...AGGTTGAAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp TCCCTTATTCAGGTGAGGGTCAATGGGGAAAAGTCCACAACTAGAGTGGACTTAGACAACTTGGTGATGTaGTCAAAGTCCTCAGGGTTC +
Preference number: 5 (lower is better)
Translates to: SLIQVRVNGEKSTTRVDLDNLVM*SKSSGF
Trigger: GAACCCTGAGGACTTTGACAACATCACCAAGTTGTC...TAAGTCCACTCTAGTTGTGGACTTTTCCCCATTGACCCTCACCTGAATAAGGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp ACAACTAGAGTGGACTTAGGGAGTGCCCGAGTTTCTCCTGATCTAAGACAGCATGTTCTGAACTTCGCCTaGATGCCGAATATACACGTA +
Preference number: 5 (lower is better)
Translates to: TTRVDLGSARVSPDLRQHVLNFA*MPNIHV
Trigger: TACGTGTATATTCGGCATCAAGGCGAAGTTCAGAAC...ATGCTGTCTTAGATCAGGAGAAACTCGGGCACTCCCTAAGTCCACTCTAGTTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTTTGAACACCCAGTTTTaGGTGGAAGGGTTCAGACCT +
Preference number: 5 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPLNTQF*VEGFRP
Trigger: AGGTCTGAACCCTTCCACCAAAAACTGGGTGTTCAA...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS-3UTR CAA 90 bp AGAAGCCTCGTACAGAGTTATCAGGCCTGTGTAGTAGAGAGTTGGTTTTGCCTTGGACCTATGCATTCATaGACAGGAAAGCAGAGATCT +
Preference number: 5 (lower is better)
Translates to: RSLVQSYQACVVESWFCLGPMHS*TGKQRS
Trigger: AGATCTCTGCTTTCCTGTCAATGAATGCATAGGTCC...AAGGCAAAACCAACTCTCTACTACACAGGCCTGATAACTCTGTACGAGGCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS-3UTR CAA 90 bp AATTGGCATTGGAAACAGGGCACGGGACTTTGTCTGTGTCTTGAAAATGTCCCTGACTTTGTCTGTGTCTaGAAAATGTCCCTGGCATTC +
Preference number: 5 (lower is better)
Translates to: NWHWKQGTGLCLCLENVPDFVCV*KMSLAF
Trigger: GAATGCCAGGGACATTTTCAAGACACAGACAAAGTC...AGGGACATTTTCAAGACACAGACAAAGTCCCGTGCCCTGTTTCCAATGCCAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000506841.6
CDS GCA 72 bp GGACGAGGCCCACCAAGGGCCAGCTTGCCTGCCCTCTaGCAACCTCATGTCCCAGCCAGCCTGCCTCTCGTG +
Preference number: 6 (lower is better)
Translates to: GRGPPRASLPAL*QPHVPASLPLV
Trigger: CACGAGAGGCAGGCTGGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTTGGTGGGCCTCGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS CAA 90 bp AGGAGTGCCTCCGAGTGCTCAGGACGAGGCCCACCAAGGGCCAGCTaGCCTGCCCTCTGCCAACCTCATGTCCCAGCCAGCCTGCCTCTC +
Preference number: 6 (lower is better)
Translates to: RSASECSGRGPPRAS*PALCQPHVPASLPL
Trigger: GAGAGGCAGGCTGGCTGGGACATGAGGTTGGCAGAGGGCAGGCAAGCTGGCCCTTGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS GCA 72 bp GCCAGGAGTGTGGGGAGGAGCAAGGCGAGCAGCGCCTaGTGGACCCACAGCAGCATAGCGAGCTTTCCAAGC +
Preference number: 6 (lower is better)
Translates to: ARSVGRSKASSA*WTHSSIASFPS
Trigger: GCTTGGAAAGCTCGCTATGCTGCTGTGGGTCCAGCAGGCGCTGCTCGCCTTGCTCCTCCCCACACTCCTGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS GCA 72 bp CACAGGCAGCCCCCTCCATCTCCAGTGAGGGTCGCCTaGAACTCAGGCAGACTTCACCCTCAGTGCCCAGGC +
Preference number: 6 (lower is better)
Translates to: HRQPPPSPVRVA*NSGRLHPQCPG
Trigger: GCCTGGGCACTGAGGGTGAAGTCTGCCTGAGTTGCAGGCGACCCTCACTGGAGATGGAGGGGGCTGCCTGTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS TCA 72 bp CCGCCGGCGGATGACCACTGGTGTGCAGCCAACTGGTaGAGGTCAGCGAGCAGTTCTGGACATCGAAGGGGA +
Preference number: 6 (lower is better)
Translates to: PPADDHWCAANW*RSASSSGHRRG
Trigger: TCCCCTTCGATGTCCAGAACTGCTCGCTGACCTTCACCAGTTGGCTGCACACCAGTGGTCATCCGCCGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000510849.5
CDS CCA 72 bp TCTGCCAACCTCATGTCCCAGCCAGCCTGCCTCTCGTaGCCACTGCTCACACCTTCTGAGGCTGCAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SANLMSQPACLS*PLLTPSEAAAS
Trigger: TGAGGCTGCAGCCTCAGAAGGTGTGAGCAGTGGCCACGAGAGGCAGGCTGGCTGGGACATGAGGTTGGCAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
CDS CCA 72 bp CACCCTCAGTGCCCAGGCAACAGGTGGGCATCTTCCTaGGAGAAGCTGGTGTCAGTGGCGCCCAATTCCCTC +
Preference number: 6 (lower is better)
Translates to: HPQCPGNRWASS*EKLVSVAPNSL
Trigger: GAGGGAATTGGGCGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS GCA 72 bp CATAGCGAGCTTTCCAAGCATAGGAGTGCCTCCGAGTaGTCAGGACGAGGCCCACCAAGGGCCAGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: HSELSKHRSASE*SGRGPPRASLP
Trigger: AGGCAAGCTGGCCCTTGGTGGGCCTCGTCCTGAGCACTCGGAGGCACTCCTATGCTTGGAAAGCTCGCTATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
CDS GCA 72 bp AGGGTCGCCTGCAACTCAGGCAGACTTCACCCTCAGTaGCCAGGCAACAGGTGGGCATCTTCCTGGGAGAAG +
Preference number: 6 (lower is better)
Translates to: RVACNSGRLHPQ*PGNRWASSWEK
Trigger: CTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGTGAAGTCTGCCTGAGTTGCAGGCGACCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS CCA 72 bp TCAGGCAGACTTCACCCTCAGTGCCCAGGCAACAGGTaGGCATCTTCCTGGGAGAAGCTGGTGTCAGTGGCG +
Preference number: 6 (lower is better)
Translates to: SGRLHPQCPGNR*ASSWEKLVSVA
Trigger: CGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGCACTGAGGGTGAAGTCTGCCTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS CCA 72 bp TCCAGTCCCTCACGGGGCGCACACCCTTCCTGTAGTTaGTCAAAAGGTAATCCGACAGCCTCAGCAGAGCGG +
Preference number: 6 (lower is better)
Translates to: SSPSRGAHPSCS*SKGNPTASAER
Trigger: CCGCTCTGCTGAGGCTGTCGGATTACCTTTTGACCAACTACAGGAAGGGTGTGCGCCCCGTGAGGGACTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS CCA 72 bp GCCCAGGCAACAGGTGGGCATCTTCCTGGGAGAAGCTaGTGTCAGTGGCGCCCAATTCCCTCAGCAGTAACT +
Preference number: 6 (lower is better)
Translates to: AQATGGHLPGRS*CQWRPIPSAVT
Trigger: AGTTACTGCTGAGGGAATTGGGCGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGTTGCCTGGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS CCA 72 bp ACAGGTGGGCATCTTCCTGGGAGAAGCTGGTGTCAGTaGCGCCCAATTCCCTCAGCAGTAACTGAGAGTCCC +
Preference number: 6 (lower is better)
Translates to: TGGHLPGRSWCQ*RPIPSAVTESP
Trigger: GGGACTCTCAGTTACTGCTGAGGGAATTGGGCGCCACTGACACCAGCTTCTCCCAGGAAGATGCCCACCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000502622.1
CDS GCA 72 bp AGCCTCACACTCCCTGGGCCACCAAGGTTGGGGAGCTaGCAAGTTTTCCTGCAATCAGTCCTTCAGCTGGAT +
Preference number: 6 (lower is better)
Translates to: SLTLPGPPRLGS*QVFLQSVLQLD
Trigger: ATCCAGCTGAAGGACTGATTGCAGGAAAACTTGGCAGCTCCCCAACCTTGGTGGCCCAGGGAGTGTGAGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000355556.6
ENST00000375498.6
ENST00000504030.7
CDS CCA 72 bp TCAAAAGGTAATCCGACAGCCTCAGCAGAGCGGGCCTaGTGGTGTTTCGGCTCCTCCTGGCTTGTAGAAAGG +
Preference number: 6 (lower is better)
Translates to: SKGNPTASAERA*WCFGSSWLVER
Trigger: CCTTTCTACAAGCCAGGAGGAGCCGAAACACCACCAGGCCCGCTCTGCTGAGGCTGTCGGATTACCTTTTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS CAA 72 bp TCCGGGACCCAGATGCTGTCCGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCCTCAGGGTTCCACTGG +
Preference number: 6 (lower is better)
Translates to: SGTQMLSVGMDN*VMLSKSSGFHW
Trigger: CCAGTGGAACCCTGAGGACTTTGACAACATCACCAAGTTGTCCATCCCCACGGACAGCATCTGGGTCCCGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS GCA 72 bp CTGGGCCACCAAGGTTGGGGAGCTGCCAAGTTTTCCTaGAATCAGTCCTTCAGCTGGATCATGTTTCAGGCG +
Preference number: 6 (lower is better)
Translates to: LGHQGWGAAKFS*NQSFSWIMFQA
Trigger: CGCCTGAAACATGATCCAGCTGAAGGACTGATTGCAGGAAAACTTGGCAGCTCCCCAACCTTGGTGGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000355556.6
ENST00000375498.6
CDS CAA 90 bp ATGAGAATGTCCGGGACCCAGATGCTGTCCGTGGGGATGGACAACTaGGTGATGTTGTCAAAGTCCTCAGGGTTCCACTGGAGAAACTCA +
Preference number: 6 (lower is better)
Translates to: MRMSGTQMLSVGMDN*VMLSKSSGFHWRNS
Trigger: TGAGTTTCTCCAGTGGAACCCTGAGGACTTTGACAACATCACCAAGTTGTCCATCCCCACGGACAGCATCTGGGTCCCGGACATTCTCAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS CAA 90 bp ACAGGCAGTCACCACCTGAAGGGGCTTGTAGTTCTGAACTTCGCCTaGATGCCGAATATACACGTACGGGATATTTGGAGACTTCCCCAC +
Preference number: 6 (lower is better)
Translates to: TGSHHLKGLVVLNFA*MPNIHVRDIWRLPH
Trigger: GTGGGGAAGTCTCCAAATATCCCGTACGTGTATATTCGGCATCAAGGCGAAGTTCAGAACTACAAGCCCCTTCAGGTGGTGACTGCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS CAA 72 bp GATTTCACCTTTTCTGGCAAGCGCCACAAAGAGATGTaGATGTCCTGGATGGTGTGCAGCCAACTGGTGAAG +
Preference number: 6 (lower is better)
Translates to: DFTFSGKRHKEM*MSWMVCSQLVK
Trigger: CTTCACCAGTTGGCTGCACACCATCCAGGACATCAACATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
CDS TCA 72 bp CTCCTCCTGGCTTGTAGAAAGGACCTATGCATTCATTaGCAGGAAAGCAGAGATCTGGCTTGGAAGAGCAAG +
Preference number: 6 (lower is better)
Translates to: LLLACRKDLCIH*QESRDLAWKSK
Trigger: CTTGCTCTTCCAAGCCAGATCTCTGCTTTCCTGTCAATGAATGCATAGGTCCTTTCTACAAGCCAGGAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000299961.5
CDS CAA 72 bp CACCACCTGAAGGGGCTTGTAGTTCTGAACTTCGCCTaGATGCCGAATATACACGTACGGGATATTTGGAGA +
Preference number: 6 (lower is better)
Translates to: HHLKGLVVLNFA*MPNIHVRDIWR
Trigger: TCTCCAAATATCCCGTACGTGTATATTCGGCATCAAGGCGAAGTTCAGAACTACAAGCCCCTTCAGGTGGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS CCA 72 bp TTCGCCTTGATGCCGAATATACACGTACGGGATATTTaGAGACTTCCCCACATCCACGAACTCATTGATGAG +
Preference number: 6 (lower is better)
Translates to: FALMPNIHVRDI*RLPHIHELIDE
Trigger: CTCATCAATGAGTTCGTGGATGTGGGGAAGTCTCCAAATATCCCGTACGTGTATATTCGGCATCAAGGCGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6
ENST00000510849.5
CDS CCA 72 bp GTTCATGAAGACACTCCTGTCGGATTTCACCTTTTCTaGCAAGCGCCACAAAGAGATGTTGATGTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: VHEDTPVGFHLF*QAPQRDVDVLD
Trigger: ATCCAGGACATCAACATCTCTTTGTGGCGCTTGCCAGAAAAGGTGAAATCCGACAGGAGTGTCTTCATGAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000299961.5
ENST00000355556.6
ENST00000375498.6
ENST00000502622.1
ENST00000504030.7
ENST00000506841.6