RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HTR2C (Homo sapiens)

Ensembl gene IDs: ENSG00000147246

Ensembl transcript IDs: ENST00000276198.6, ENST00000371950.3, ENST00000371951.5

Found 443 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ACAATCCCAAGGACTTTCGAAGCTTTTCTTTCATTGTTGATAGCCTaGATGGTGCCCCTAGGACGTCTCTCCTTCTTCTTTCTTCGGCGT +
Preference number: 1 (lower is better)
Translates to: TIPRTFEAFLSLLIA*MVPLGRLSFFFLRR
Trigger: ACGCCGAAGAAAGAAGAAGGAGAGACGTCCTAGGGGCACCATGCAGGCTATCAACAATGAAAGAAAAGCTTCGAAAGTCCTTGGGATTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CCA 90 bp GTTAACATTAAGCTCCCTCCCAGACAAAGCAGTGGCGGCAACTCTTaGAATCTGCCTGACAGGAGGCTTTTTCTCTACCTTATAATTGCA +
Preference number: 1 (lower is better)
Translates to: VNIKLPPRQSSGGNS*NLPDRRLFLYLIIA
Trigger: TGCAATTATAAGGTAGAGAAAAAGCCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAGGGAGCTTAATGTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR GCA 90 bp CTAACCACACTGGAGGGATTTACTGGTAACTCTAAATTCTCAACTTaGATCTCTATACCGGGCTCATTGTCACTGGCTTTCTCGATCACC +
Preference number: 1 (lower is better)
Translates to: LTTLEGFTGNSKFST*ISIPGSLSLAFSIT
Trigger: GGTGATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGAGATGCAAGTTGAGAATTTAGAGTTACCAGTAAATCCCTCCAGTGTGGTTAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CCA 90 bp TTCCTCAAATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTaGATTTATCTATACTGTGTGTTGAGAACACAGACCAAGGGTTTT +
Preference number: 1 (lower is better)
Translates to: FLKYSSSSTALVADY*IYLYCVLRTQTKGF
Trigger: AAAACCCTTGGTCTGTGTTCTCAACACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTATTTGAGGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 90 bp ATGGGCACGTATGGAAATACTGTTACTAGAAACACTTGTATACTCTaGACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAA +
Preference number: 1 (lower is better)
Translates to: MGTYGNTVTRNTCIL*TQHRLNGLTLAMLE
Trigger: TTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTATACAAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CCA 90 bp TTCTGCCCTACATTAATACAAATCGATGGATTCATGCAACATACATaGCATACATGCAGGACACCATCTGTATGTGCAGAACTCATGCTA +
Preference number: 1 (lower is better)
Translates to: FCPTLIQIDGFMQHT*HTCRTPSVCAELML
Trigger: TAGCATGAGTTCTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CCA 90 bp GTCCTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATaGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGT +
Preference number: 1 (lower is better)
Translates to: VLLLSAILPYINTNR*IHATYMAYMQDTIC
Trigger: ACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAGGAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 90 bp ACATTAATACAAATCGATGGATTCATGCAACATACATGGCATACATaGAGGACACCATCTGTATGTGCAGAACTCATGCTAAATGCATGC +
Preference number: 1 (lower is better)
Translates to: TLIQIDGFMQHTWHT*RTPSVCAELMLNAC
Trigger: GCATGCATTTAGCATGAGTTCTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCATCGATTTGTATTAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTaGAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGC +
Preference number: 1 (lower is better)
Translates to: LYLGMLKQLTDVWQC*KSNRDCMSFLKYSS
Trigger: GCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 90 bp GGATTGCTGAAGGATTTTCTTCAGTCCTTCTTCTATCAGCTATTCTaGCCTACATTAATACAAATCGATGGATTCATGCAACATACATGG +
Preference number: 1 (lower is better)
Translates to: GLLKDFLQSFFYQLF*PTLIQIDGFMQHTW
Trigger: CCATGTATGTTGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAGGACTGAAGAAAATCCTTCAGCAATCC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CCA 90 bp ACTTTCATGTTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTaGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAA +
Preference number: 1 (lower is better)
Translates to: TFMLYLGMLKQLTDV*QCCKSNRDCMSFLK
Trigger: TTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAACATGAAAGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCTCATGTGCCTCATTCTaGTCACCTGCAAATGCCACC +
Preference number: 2 (lower is better)
Translates to: HFHKLAAAFSCTREFGRISCASF*SPANAT
Trigger: GGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCCTGCAAATGCCACCTaGGATGAACATGAACGTTGC +
Preference number: 2 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNPANAT*DEHERC
Trigger: GCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR GCA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACGCTGCAGCCTTTTCCTaGACTAGAGAGTTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENAAAFS*TREFGR
Trigger: CCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGC...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTCAGCAGCTCTTCCACTaGCCTTGTGGCAGACTATTG +
Preference number: 2 (lower is better)
Translates to: IHSCVKWARMEILLLETLQQLFH*PCGRLL
Trigger: CAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTG...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTCATGTGCCTCATTCTaGTCACCTGCAAATGCCACC +
Preference number: 2 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMSCASF*SPANAT
Trigger: GGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR CCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTCCCAGACAAAGCAGTaGCGGCAACTCTTGGAATCT +
Preference number: 2 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMSQTKQ*RQLLES
Trigger: AGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CAA 90 bp TTTCCTCAAATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATaGGATTTATCTATACTGTGTGTTGAGAACACAGACCAAGGGTTT +
Preference number: 2 (lower is better)
Translates to: FPQIQQLFHCPCGRL*DLSILCVENTDQGF
Trigger: AAACCCTTGGTCTGTGTTCTCAACACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTATTTGAGGAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCCCTGCAAATGCCACCTaGGATGAACATGAACGTTGC +
Preference number: 2 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSPANAT*DEHERC
Trigger: GCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGG...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGACTGCCTCTGACTCACTaGCAGATGTATCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGLPLTH*QMYQKA
Trigger: TGCTTTCTGATACATCTGTCAGTGAGTCAGAGGCAG...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGGTAAAACATGTGCTATaGGCTTGCCCTGATAGTTCA +
Preference number: 2 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQVKHVL*ACPDSS
Trigger: TGAACTATCAGGGCAAGCTCATAGCACATGTTTTAC...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGACTCTTGGAATCTGCCTaGCAGGAGGCTTTTTCTCTA +
Preference number: 2 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGLLESA*QEAFSL
Trigger: TAGAGAAAAAGCCTCCTGTCAGGCAGATTCCAAGAG...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CAA 90 bp AAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTaGAATCCTGGGTTGGGAAATAACTCTGGGATCTCATTTCCCAGT +
Preference number: 2 (lower is better)
Translates to: KHTNFQDAEIKTQLM*NPGLGNNSGISFPS
Trigger: ACTGGGAAATGAGATCCCAGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR TCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTCCTGCAAATGCCACCTaGGATGAACATGAACGTTGC +
Preference number: 2 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLPANAT*DEHERC
Trigger: GCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGG...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCATAACTGCAGTGCAATaGAGAGCTTGCCACTTTCAC +
Preference number: 2 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVITAVQ*RACHFH
Trigger: GTGAAAGTGGCAAGCTCTTCATTGCACTGCAGTTAT...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCGGCCCACGAATGAAATaGTGGCCAACACTTATTGTA +
Preference number: 2 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVGPRMK*WPTLIV
Trigger: TACAATAAGTGTTGGCCATCATTTCATTCGTGGGCC...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCACAGCAGGCCCACGAATaGAATGATGGCCAACACTTA +
Preference number: 2 (lower is better)
Translates to: LLLSAILPYINTNRWIHAQQAHE*NDGQHL
Trigger: TAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTG...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTTTATCCACAGTTGTGTaGAATGGGCACGTATGGAAA +
Preference number: 2 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTLSTVV*NGHVWK
Trigger: TTTCCATACGTGCCCATTTCACACAACTGTGGATAA...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGACACTACTTCAGATCTaGATGCATGGTCTTTTTAAG +
Preference number: 2 (lower is better)
Translates to: SSSSTALVADYWIYLYCVTLLQI*MHGLFK
Trigger: CTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGT...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAGATGAACATGAACGTTaGCATATGCACAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTDEHER*HMHKRK
Trigger: CTTTCTTTTGTGCATATGGCAACGTTCATGTTCATC...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTGACACCATCTGTATGTaGAGAACTCATGCTAAATGC +
Preference number: 2 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTDTICM*RTHAKC
Trigger: GCATTTAGCATGAGTTCTGCACATACAGATGGTGTC...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTCATACATGGCATACATaGAGGACACCATCTGTATGT +
Preference number: 2 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTHTWHT*RTPSVC
Trigger: ACATACAGATGGTGTCCTGCATGTATGCCATGTATG...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGTCTAAATTCTCAACTTaGATCTCTATACCGGGCTCA +
Preference number: 2 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQSKFST*ISIPGS
Trigger: TGAGCCCGGTATAGAGATGCAAGTTGAGAATTTAGA...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR CCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGTCATGTGCCTCATTCTaGTCACCTGCAAATGCCACC +
Preference number: 2 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMSCASF*SPANAT
Trigger: GGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 90 bp TGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATaGATGTTGAATCCTGGGTTGGGAAATAACTCTGGGATCTCATTT +
Preference number: 2 (lower is better)
Translates to: CVKHTNFQDAEIKTQ*MLNPGLGNNSGISF
Trigger: AAATGAGATCCCAGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR TCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCACTGCCTCTGACTCACTaGCAGATGTATCAGAAAGCA +
Preference number: 2 (lower is better)
Translates to: LLLSAILPYINTNRWIHALPLTH*QMYQKA
Trigger: TGCTTTCTGATACATCTGTCAGTGAGTCAGAGGCAG...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGCTATTAAAATGCTACTaGATTCTTAGAGAGCAGCAG +
Preference number: 2 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQLLKCY*ILREQQ
Trigger: CTGCTGCTCTCTAAGAATTCAGTAGCATTTTAATAG...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGATCAGAAGCTTTTCCATaGGCTTTTGGTTACAGGACT +
Preference number: 2 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGSEAFP*AFGYRT
Trigger: AGTCCTGTAACCAAAAGCTCATGGAAAAGCTTCTGA...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR GCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGATGAACGTTGCCATATaGACAAAAGAAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: SSSSTALVADYWIYLYCVMNVAI*TKEREK
Trigger: TTTCTCTCTTTCTTTTGTGCATATGGCAACGTTCAT...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTTTAGGGACAGACATTaGAGTAAATACCAACACAAC +
Preference number: 2 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILFRDRH*SKYQHN
Trigger: GTTGTGTTGGTATTTACTGCAATGTCTGTCCCTAAA...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACAGCTGCAGCCTTTTCCTaGACTAGAGAGTTTGGAAGG +
Preference number: 2 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTAAAFS*TREFGR
Trigger: CCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGC...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGGATGTTTGGCAGTGTTaGAAATCAAATAGAGACTGT +
Preference number: 2 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQDVWQC*KSNRDC
Trigger: ACAGTCTCTATTTGATTTGCAACACTGCCAAACATC...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGCTTCCACTGCCCTTGTaGCAGACTATTGGATTTATC +
Preference number: 2 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLLPLPL*QTIGFI
Trigger: GATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAG...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTATAACTGCAGTGCAATaGAGAGCTTGCCACTTTCAC +
Preference number: 2 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSITAVQ*RACHFH
Trigger: GTGAAAGTGGCAAGCTCTTCATTGCACTGCAGTTAT...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTATCTATACTGTGTGTTaGGAACACAGACCAAGGGTT +
Preference number: 2 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSIYTVC*EHRPRV
Trigger: AACCCTTGGTCTGTGTTCTCAACACACAGTATAGAT...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTCAGAGGATTGATTCCTaGACAAACATAGCCAATCCA +
Preference number: 2 (lower is better)
Translates to: IHSCVKWARMEILLLETLQRIDS*TNIANP
Trigger: TGGATTGGCTATGTTTGTTCAGGAATCAATCCTCTG...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR TCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGATATACACCAGAGGATTaGTTCCTGAACAAACATAGC +
Preference number: 2 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGYTPED*FLNKHS
Trigger: GCTATGTTTGTTCAGGAATCAATCCTCTGGTGTATA...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTCCCGGTTAACCAGCTaGTATGTTAAAATACCACTA +
Preference number: 2 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMSRLTS*YVKIPL
Trigger: TAGTGGTATTTTAACATAGCAGCTGGTTAACCGGGA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTCCCGGTTAACCAGCTaGTATGTTAAAATACCACTA +
Preference number: 2 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSSRLTS*YVKIPL
Trigger: TAGTGGTATTTTAACATAGCAGCTGGTTAACCGGGA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR CCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCTGCAACGCAAATAGTTaGAGAATGCCCTTCGGTAAA +
Preference number: 2 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSCNANS*RMPFGK
Trigger: TTTACCGAAGGGCATTCTCCAACTATTTGCGTTGCA...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CAA 90 bp CAGGTAGACTTGACTTTCATGTTATATTTGGGCATGCTCAAGCAATaGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATG +
Preference number: 2 (lower is better)
Translates to: QVDLTFMLYLGMLKQ*TDVWQCCKSNRDCM
Trigger: CATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAACATGAAAGTCAAGTCTACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACAGCTCAAGCAATTGACTaGTGTTTGGCAGTGTTGCAA +
Preference number: 2 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTAQAID*CLAVLQ
Trigger: TTGCAACACTGCCAAACATCAGTCAATTGCTTGAGC...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGACTTTTTAAGGATTGCTaGAGGATTTTCTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGLFKDC*RIFFSP
Trigger: AGGACTGAAGAAAATCCTTCAGCAATCCTTAAAAAG...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR TCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTCGGTAAATTTTGTTaGACAGAGTATACACCAGAG +
Preference number: 2 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMFGKFC*TEYTPE
Trigger: CTCTGGTGTATACTCTGTTCAACAAAATTTACCGAA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR GCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACATGAACGTTGCCATATaGACAAAAGAAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNMNVAI*TKEREK
Trigger: TTTCTCTCTTTCTTTTGTGCATATGGCAACGTTCAT...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTTTAGGGACAGACATTaGAGTAAATACCAACACAAC +
Preference number: 2 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSFRDRH*SKYQHN
Trigger: GTTGTGTTGGTATTTACTGCAATGTCTGTCCCTAAA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR CCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTTTCCATGAGCTTTTaGTTACAGGACTTCTCACAA +
Preference number: 2 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMFSMSF*LQDFSQ
Trigger: TTGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR TCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAAATTTCCAGGATGCTaGGATCAAAACCCAATTGAT +
Preference number: 2 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSKFPGC*DQNPID
Trigger: ATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTT...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTGATGAACATGAACGTTaGCATATGCACAAAAGAAAG +
Preference number: 2 (lower is better)
Translates to: IHSCVKWARMEILLLETLDEHER*HMHKRK
Trigger: CTTTCTTTTGTGCATATGGCAACGTTCATGTTCATC...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCTTTAGGGACAGACATTaGAGTAAATACCAACACAAC +
Preference number: 2 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSFRDRH*SKYQHN
Trigger: GTTGTGTTGGTATTTACTGCAATGTCTGTCCCTAAA...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCATCCCGGTTAACCAGCTaGTATGTTAAAATACCACTA +
Preference number: 2 (lower is better)
Translates to: LLLSAILPYINTNRWIHASRLTS*YVKIPL
Trigger: TAGTGGTATTTTAACATAGCAGCTGGTTAACCGGGA...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGGATGTTTGGCAGTGTTaGAAATCAAATAGAGACTGT +
Preference number: 2 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLDVWQC*KSNRDC
Trigger: ACAGTCTCTATTTGATTTGCAACACTGCCAAACATC...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCCAAATAGTTGGAGAATaGCCTTCGGTAAATTTTGTT +
Preference number: 2 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVQIVGE*PSVNFV
Trigger: AACAAAATTTACCGAAGGGCATTCTCCAACTATTTG...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR CCA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACACACAGTTGTGTGAAATaGGCACGTATGGAAATACTG +
Preference number: 2 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTHSCVK*ARMEIL
Trigger: CAGTATTTCCATACGTGCCCATTTCACACAACTGTG...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTaGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTA +
Preference number: 2 (lower is better)
Translates to: AQNLRIAHNLRIITR*GTIKYYYLMTQESL
Trigger: TAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 90 bp TTTGTTTCATACCAAACTGCACAGAACTTACGAATAGCACACAACTaGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTG +
Preference number: 2 (lower is better)
Translates to: FVSYQTAQNLRIAHN*RIITRLGTIKYYYL
Trigger: CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGCAGTTTGGTATGAAACAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 90 bp ATAGCCAATCCAAACAAACACATTCAGAAGCTTTTCCATGAGCTTTaGGTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAAT +
Preference number: 2 (lower is better)
Translates to: IANPNKHIQKLFHEL*VTGLLTKNRQNIGN
Trigger: ATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAAGCTTCTGAATGTGTTTGTTTGGATTGGCTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR TCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCAAAATTTCCAGGATGCTaGGATCAAAACCCAATTGAT +
Preference number: 2 (lower is better)
Translates to: LLLSAILPYINTNRWIHAKFPGC*DQNPID
Trigger: ATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTT...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTATGAACGTTGCCATATaGACAAAAGAAAGAGAGAAA +
Preference number: 2 (lower is better)
Translates to: IHSCVKWARMEILLLETLMNVAI*TKEREK
Trigger: TTTCTCTCTTTCTTTTGTGCATATGGCAACGTTCAT...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTAACACTTGTATACTCTaGACACAGCATAGACTGAAT +
Preference number: 2 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSNTCIL*TQHRLN
Trigger: ATTCAGTCTATGCTGTGTGCAGAGTATACAAGTGTT...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTATTGGTAATGAAAAATaGGCACCACATGATCAGAAA +
Preference number: 2 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSIGNEK*APHDQK
Trigger: TTTCTGATCATGTGGTGCCCATTTTTCATTACCAAT...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR TCA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACACTTTTTAAGGATTGCTaGAGGATTTTCTTCAGTCCT +
Preference number: 2 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTLFKDC*RIFFSP
Trigger: AGGACTGAAGAAAATCCTTCAGCAATCCTTAAAAAG...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR GCA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACAAACACTTGTATACTCTaGACACAGCATAGACTGAAT +
Preference number: 2 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTNTCIL*TQHRLN
Trigger: ATTCAGTCTATGCTGTGTGCAGAGTATACAAGTGTT...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CCA 72 bp AAGCTCCCTCCCAGACAAAGCAGTGGCGGCAACTCTTaGAATCTGCCTGACAGGAGGCTTTTTCTCTACCTT +
Preference number: 3 (lower is better)
Translates to: KLPPRQSSGGNS*NLPDRRLFLYL
Trigger: AAGGTAGAGAAAAAGCCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAGGGAGCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CCA 72 bp TCTCAACTTGCATCTCTATACCGGGCTCATTGTCACTaGCTTTCTCGATCACCGGTTCATTGGTATGCCGAT +
Preference number: 3 (lower is better)
Translates to: SQLASLYRAHCH*LSRSPVHWYAD
Trigger: ATCGGCATACCAATGAACCGGTGATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGAGATGCAAGTTGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR CAA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACATCTATACCGGGCTCATaGTCACTGGCTTTCTCGATC +
Preference number: 3 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTSIPGS*SLAFSI
Trigger: GATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGA...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR CAA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCGCTTTTCTTTCATTGTaGATAGCCTGCATGGTGCCC +
Preference number: 3 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIAFLSL*IACMVP
Trigger: GGGCACCATGCAGGCTATCAACAATGAAAGAAAAGC...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR TCA 72 bp TCATGTGCCTCATTCTGGTCACCTGCAAATGCCACCTaGGATGAACATGAACGTTGCCATATGCACAAAAGA +
Preference number: 3 (lower is better)
Translates to: SCASFWSPANAT*DEHERCHMHKR
Trigger: TCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR GCA 72 bp AGGACTTTCGAAGCTTTTCTTTCATTGTTGATAGCCTaGATGGTGCCCCTAGGACGTCTCTCCTTCTTCTTT +
Preference number: 3 (lower is better)
Translates to: RTFEAFLSLLIA*MVPLGRLSFFF
Trigger: AAAGAAGAAGGAGAGACGTCCTAGGGGCACCATGCAGGCTATCAACAATGAAAGAAAAGCTTCGAAAGTCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR CCA 72 bp TACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTaGATTTATCTATACTGTGTGTTGAGAACACAGACC +
Preference number: 3 (lower is better)
Translates to: YSSSSTALVADY*IYLYCVLRTQT
Trigger: GGTCTGTGTTCTCAACACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGGAAGCTTTTCTTTCATaGTTGATAGCCTGCATGGTG +
Preference number: 3 (lower is better)
Translates to: SSSSTALVADYWIYLYCVEAFLS*LIACMV
Trigger: CACCATGCAGGCTATCAACAATGAAAGAAAAGCTTC...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR CAA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAAAAACCCAATTGATGTaGAATCCTGGGTTGGGAAAT +
Preference number: 3 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTKTQLM*NPGLGN
Trigger: ATTTCCCAACCCAGGATTCAACATCAATTGGGTTTT...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGTATCTATACTGTGTGTaGAGAACACAGACCAAGGGT +
Preference number: 3 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQYLYCV*RTQTKG
Trigger: ACCCTTGGTCTGTGTTCTCAACACACAGTATAGATA...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR TCA 72 bp ATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATaGGTTTCCTCAAATACAGCAGCTCTTCCACTGCCC +
Preference number: 3 (lower is better)
Translates to: MFGSVANQIETV*VSSNTAALPLP
Trigger: GGGCAGTGGAAGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 72 bp CTGTATGAGTTTCCTCAAATACAGCAGCTCTTCCACTaGCCTTGTGGCAGACTATTGGATTTATCTATACTG +
Preference number: 3 (lower is better)
Translates to: LYEFPQIQQLFH*PCGRLLDLSIL
Trigger: CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTATTTGAGGAAACTCATACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 72 bp CAAATCGATGGATTCATGCAACATACATGGCATACATaGAGGACACCATCTGTATGTGCAGAACTCATGCTA +
Preference number: 3 (lower is better)
Translates to: QIDGFMQHTWHT*RTPSVCAELML
Trigger: TAGCATGAGTTCTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCATCGATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCCTACATATGTAGCTaGTACCGTAGGAAAAGACTG +
Preference number: 3 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNSYICS*YRRKRL
Trigger: CAGTCTTTTCCTACGGTACAAGCTACATATGTAGGA...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR CAA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTGAGATCAAAACCCAATaGATGTTGAATCCTGGGTTG +
Preference number: 3 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTEIKTQ*MLNPGL
Trigger: CAACCCAGGATTCAACATCAATTGGGTTTTGATCTC...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTGCTCTTCCACTGCCCTaGTGGCAGACTATTGGATTT +
Preference number: 3 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLALPLP*WQTIGF
Trigger: AAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGC...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTGGCATGCTCAAGCAATaGACTGATGTTTGGCAGTGT +
Preference number: 3 (lower is better)
Translates to: IHSCVKWARMEILLLETLGMLKQ*TDVWQC
Trigger: ACACTGCCAAACATCAGTCAATTGCTTGAGCATGCC...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTCCTACATATGTAGCTaGTACCGTAGGAAAAGACTG +
Preference number: 3 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMSYICS*YRRKRL
Trigger: CAGTCTTTTCCTACGGTACAAGCTACATATGTAGGA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR-3UTR CAA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTAGTGCAATGAAGAGCTaGCCACTTTCACAAATTAGC +
Preference number: 3 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSSAMKS*PLSQIS
Trigger: GCTAATTTGTGAAAGTGGCAAGCTCTTCATTGCACT...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR TCA 72 bp TTCACTTTGTGTGAAGCACACAAATTTCCAGGATGCTaGGATCAAAACCCAATTGATGTTGAATCCTGGGTT +
Preference number: 3 (lower is better)
Translates to: FTLCEAHKFPGC*DQNPIDVESWV
Trigger: AACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAGTGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR CCA 72 bp CTATCAGCTATTCTGCCCTACATTAATACAAATCGATaGATTCATGCAACATACATGGCATACATGCAGGAC +
Preference number: 3 (lower is better)
Translates to: LSAILPYINTNR*IHATYMAYMQD
Trigger: GTCCTGCATGTATGCCATGTATGTTGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCATCCTACATATGTAGCTaGTACCGTAGGAAAAGACTG +
Preference number: 3 (lower is better)
Translates to: LLLSAILPYINTNRWIHASYICS*YRRKRL
Trigger: CAGTCTTTTCCTACGGTACAAGCTACATATGTAGGA...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGAGTGCAATGAAGAGCTaGCCACTTTCACAAATTAGC +
Preference number: 3 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMSAMKS*PLSQIS
Trigger: GCTAATTTGTGAAAGTGGCAAGCTCTTCATTGCACT...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTGCAAGGCAGGTAGACTaGACTTTCATGTTATATTTG +
Preference number: 3 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSARQVD*TFMLYL
Trigger: CAAATATAACATGAAAGTCAAGTCTACCTGCCTTGC...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTGCAAGGCAGGTAGACTaGACTTTCATGTTATATTTG +
Preference number: 3 (lower is better)
Translates to: IHSCVKWARMEILLLETLARQVD*TFMLYL
Trigger: CAAATATAACATGAAAGTCAAGTCTACCTGCCTTGC...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 72 bp TATGGAAATACTGTTACTAGAAACACTTGTATACTCTaGACACAGCATAGACTGAATGGCCTGACTTTAGCA +
Preference number: 3 (lower is better)
Translates to: YGNTVTRNTCIL*TQHRLNGLTLA
Trigger: TGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTATACAAGTGTTTCTAGTAACAGTATTTCCATA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CCA 72 bp ACATTAATACAAATCGATGGATTCATGCAACATACATaGCATACATGCAGGACACCATCTGTATGTGCAGAA +
Preference number: 3 (lower is better)
Translates to: TLIQIDGFMQHT*HTCRTPSVCAE
Trigger: TTCTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCATCGATTTGTATTAATGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR-3UTR CAA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTCCTTGTGGCAGACTATaGGATTTATCTATACTGTGT +
Preference number: 3 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLPCGRL*DLSILC
Trigger: ACACAGTATAGATAAATCCAATAGTCTGCCACAAGG...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 72 bp CTCTACCTTATAATTGCAACGCAAATAGTTGGAGAATaGCCTTCGGTAAATTTTGTTGAACAGAGTATACAC +
Preference number: 3 (lower is better)
Translates to: LYLIIATQIVGE*PSVNFVEQSIH
Trigger: GTGTATACTCTGTTCAACAAAATTTACCGAAGGGCATTCTCCAACTATTTGCGTTGCAATTATAAGGTAGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371950.3
3UTR-3UTR CAA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACTTTCATGTTATATTaGGGCATGCTCAAGCAATTG +
Preference number: 3 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMTFMLY*GMLKQL
Trigger: CAATTGCTTGAGCATGCCCAAATATAACATGAAAGT...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR GCA 72 bp AAGGATTTTCTTCAGTCCTTCTTCTATCAGCTATTCTaGCCTACATTAATACAAATCGATGGATTCATGCAA +
Preference number: 3 (lower is better)
Translates to: KDFLQSFFYQLF*PTLIQIDGFMQ
Trigger: TTGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAGGACTGAAGAAAATCCTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTCGGCAGTCGGTGCGCTaGGCTGCGCTGCGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSRQSVR*AALRCA
Trigger: CGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCG...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGTCGGTGCGCTGAGCTaGGCTGCGCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREVGALS*AALRAA
Trigger: TGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGAC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCCGGCAGTCGGTGCGCTaGGCTGCGCTGCGCTGCGCG +
Preference number: 4 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSRQSVR*AALRCA
Trigger: CGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCG...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTGCGCTGAGCTGCGCTaGGCTGCGCGCCGCAACCTC +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKERECAELR*AARRNL
Trigger: GAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGTCGGTGCGCTGAGCTaGGCTGCGCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLVGALS*AALRAA
Trigger: TGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGAC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTGCGCTGAGCTGCGCTaGGCTGCGCGCCGCAACCTC +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLCAELR*AARRNL
Trigger: GAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAGTCGGTGCGCTGAGCTaGGCTGCGCTGCGCGCCGCA +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSVGALS*AALRAA
Trigger: TGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGAC...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CGAAGCTTTTCTTTCATTGTTGATAGCCTGCATGGTGCCCCTAGGACGTCTCTCCGAAATTTGGGTCGTTaGGCACGCACGTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: RSFSFIVDSLHGAPRTSLRNLGR*ARTSCC
Trigger: ACAACACGACGTGCGTGCTCAACGACCCAAATTTCG...GAGAGACGTCCTAGGGGCACCATGCAGGCTATCAACAATGAAAGAAAAGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR TCA 90 bp AAGCTCCCTCCCAGACAAAGCAGTGGCGGCAACTCTTGGAATCTGCCTGACAGGCAGAGGATTGATTCCTaGACAAACATAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: KLPPRQSSGGNSWNLPDRQRIDS*TNIANP
Trigger: TGGATTGGCTATGTTTGTTCAGGAATCAATCCTCTG...CCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAGGGAGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTTGCGCTGAGCTGCGCTaGGCTGCGCGCCGCAACCTC +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLCAELR*AARRNL
Trigger: GAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCA...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACGCGGAGGGAGAGGAATaGAGGGAGCTCGGCGCGATA +
Preference number: 4 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENAEGEE*RELGAI
Trigger: TATCGCGCCGAGCTCCCTCCATTCCTCTCCCTCCGC...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCAGAAACGGACTCGGCTaGAATCGCCCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVRNGLG*NRPAEP
Trigger: GGGCTCCGCTGGGCGATTGCAGCCGAGTCCGTTTCT...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGAGAAACGGACTCGGCTaGAATCGCCCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMRNGLG*NRPAEP
Trigger: GGGCTCCGCTGGGCGATTGCAGCCGAGTCCGTTTCT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp AAGCTCCCTCCCAGACAAAGCAGTGGCGGCAACTCTTGGAATCTGCCTGACAGGCTTTTTAAGGATTGCTaGAGGATTTTCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: KLPPRQSSGGNSWNLPDRLFKDC*RIFFSP
Trigger: AGGACTGAAGAAAATCCTTCAGCAATCCTTAAAAAG...CCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAGGGAGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTAGAAACGGACTCGGCTaGAATCGCCCAGCGGAGCCC +
Preference number: 4 (lower is better)
Translates to: IHSCVKWARMEILLLETLRNGLG*NRPAEP
Trigger: GGGCTCCGCTGGGCGATTGCAGCCGAGTCCGTTTCT...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AAGCTCCCTCCCAGACAAAGCAGTGGCGGCAACTCTTGGAATCTGCCTGACAGGGATGTTTGGCAGTGTTaGAAATCAAATAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KLPPRQSSGGNSWNLPDRDVWQC*KSNRDC
Trigger: ACAGTCTCTATTTGATTTGCAACACTGCCAAACATC...CCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAGGGAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR CCA 90 bp TTAGAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAGGCGGTTCCTCGGTGTaGCCGTGCAGTAACATCAAA +
Preference number: 4 (lower is better)
Translates to: LESSRPTNEMMANTYCNTGGSSV*PCSNIK
Trigger: TTTGATGTTACTGCACGGCCACACCGAGGAACCGCC...TGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTCTAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGGGCGGTTCCTCGGTGTaGCCGTGCAGTAACATCAAA +
Preference number: 4 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILGGSSV*PCSNIK
Trigger: TTTGATGTTACTGCACGGCCACACCGAGGAACCGCC...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCACCCCGTCTGGGAATTTaGAGCGTCCACCATCGGAGG +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSPRLGI*SVHHRR
Trigger: CCTCCGATGGTGGACGCTTCAAATTCCCAGACGGGG...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCCGAAATTTGGGTCGTTaGGCACGCACGTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIRNLGR*ARTSCC
Trigger: ACAACACGACGTGCGTGCTCAACGACCCAAATTTCG...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACACCTGCAAATGCCACCTaGGATGAACATGAACGTTGC +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTPANAT*DEHERC
Trigger: GCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGG...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CTCCCAGACAAAGCAGTGGCGGCAACTCTTGGAATCTGCCTGACAGGAGGCTTTCAAATAGAGACTGTATaGGTTTCCTCAAATACAGCA +
Preference number: 4 (lower is better)
Translates to: LPDKAVAATLGICLTGGFQIETV*VSSNTA
Trigger: TGCTGTATTTGAGGAAACTCATACAGTCTCTATTTG...AAAGCCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGTCCTCGGTGTGGCCGTaGAGTAACATCAAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVSSVWP*SNIKAC
Trigger: ACAAGCTTTGATGTTACTGCACGGCCACACCGAGGA...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGCGGCCGTATTCCTCTTaGAGCACTTCAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVRPYSS*STSGNP
Trigger: TGGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCG...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAGCTGCAGCCTTTTCCTaGACTAGAGAGTTTGGAAGG +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTAAAFS*TREFGR
Trigger: CCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGC...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTGCGGAGGGAGAGGAATaGAGGGAGCTCGGCGCGATA +
Preference number: 4 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSAEGEE*RELGAI
Trigger: TATCGCGCCGAGCTCCCTCCATTCCTCTCCCTCCGC...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAGTTTTGTACCCCGTCTaGGAATTTGAAGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTVLYPV*EFEAST
Trigger: GGTGGACGCTTCAAATTCCCAGACGGGGTACAAAAC...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCCTTCGGCGTGCGTTCTaGTCTTGGTTAGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRILRRAF*SWLGFA
Trigger: TGCAAACCCTAACCAAGACCAGAACGCACGCCGAAG...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTAGTGGCGGCAACTCTTaGAATCTGCCTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTSGGNS*NLPDRR
Trigger: CCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACT...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGTCCCAGACAAAGCAGTaGCGGCAACTCTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVSQTKQ*RQLLES
Trigger: AGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGA...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGAGGAGAGACAGGGGCATaGCAAGTAGTCCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGGETGA*QVVPLA
Trigger: TGCTAGTGGGACTACTTGTCATGCCCCTGTCTCTCC...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGGAGAGACAGGGGCATaGCAAGTAGTCCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSGETGA*QVVPLA
Trigger: TGCTAGTGGGACTACTTGTCATGCCCCTGTCTCTCC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGCTGCCTCTGACTCACTaGCAGATGTATCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVLPLTH*QMYQKA
Trigger: TGCTTTCTGATACATCTGTCAGTGAGTCAGAGGCAG...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACACACCTCCAGCATCTCTaGACTAATCGCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTHLQHL*TNRVFF
Trigger: AAAGAAGACGCGATTAGTGCAGAGATGCTGGAGGTG...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGGGCCTATGTTATAGATaGTCGCGGGTGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVGLCYR*SRVLAD
Trigger: ATCAGCTAACACCCGCGAGCATCTATAACATAGGCC...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAGGCCTATGTTATAGATaGTCGCGGGTGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTGLCYR*SRVLAD
Trigger: ATCAGCTAACACCCGCGAGCATCTATAACATAGGCC...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGTGCACAAGGAATGAATaGACCGCATTCCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVCTRNE*TAFLRF
Trigger: GAACCTGAGGAATGCGGTGCATTCATTCCTTGTGCA...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGCGGCCGTATTCCTCTTaGAGCACTTCAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQRPYSS*STSGNP
Trigger: TGGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCG...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGCGGTTCCTCGGTGTaGCCGTGCAGTAACATCAAA +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLGGSSV*PCSNIK
Trigger: TTTGATGTTACTGCACGGCCACACCGAGGAACCGCC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGAGTGGCGGCAACTCTTaGAATCTGCCTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMSGGNS*NLPDRR
Trigger: CCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGAGTGGCGGCAACTCTTaGAATCTGCCTGACAGGAGG +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLSGGNS*NLPDRR
Trigger: CCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACT...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGCGGGCTCATTGTCACTaGCTTTCTCGATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKERERAHCH*LSRSPV
Trigger: AACCGGTGATCGAGAAAGCCAGTGACAATGAGCCCG...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTCATGTGCCTCATTCTaGTCACCTGCAAATGCCACC +
Preference number: 4 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILSCASF*SPANAT
Trigger: GGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGGGAGAGACAGGGGCATaGCAAGTAGTCCCACTAGCA +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLGETGA*QVVPLA
Trigger: TGCTAGTGGGACTACTTGTCATGCCCCTGTCTCTCC...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTCGAAATTTGGGTCGTTaGGCACGCACGTCGTGTTGT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSRNLGR*ARTSCC
Trigger: ACAACACGACGTGCGTGCTCAACGACCCAAATTTCG...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGCTCTTGGAATCTGCCTaGCAGGAGGCTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQLLESA*QEAFSL
Trigger: TAGAGAAAAAGCCTCCTGTCAGGCAGATTCCAAGAG...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGCCTGCAAATGCCACCTaGGATGAACATGAACGTTGC +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREPANAT*DEHERC
Trigger: GCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGG...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCCAGACAGTTGTTTTTaGAGGATGGCGTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNPDSCF*RMASVG
Trigger: GCCAACTGACGCCATCCTTCAAAAACAACTGTCTGG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000371951.5
CDS-3UTR GCA 90 bp TTAGAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACACACCTCCAGCATCTCTaGACTAATCGCGTCTTCTTT +
Preference number: 4 (lower is better)
Translates to: LESSRPTNEMMANTYCNTHLQHL*TNRVFF
Trigger: AAAGAAGACGCGATTAGTGCAGAGATGCTGGAGGTG...TGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTCTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTCCTCGGTGTGGCCGTaGAGTAACATCAAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKERESSVWP*SNIKAC
Trigger: ACAAGCTTTGATGTTACTGCACGGCCACACCGAGGA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGTCTTGGTTAGGGTTTaGAGAGTTCTCTTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREVLVRV*RVLFLG
Trigger: GCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGAC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTGTCTTGGTTAGGGTTTaGAGAGTTCTCTTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTVLVRV*RVLFLG
Trigger: GCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGAC...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCTTCTTTCTTCGGCGTaGGTTCTGGTCTTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNLLSSA*VLVLVR
Trigger: CCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CGAAGCTTTTCTTTCATTGTTGATAGCCTGCATGGTGCCCCTAGGACGTCTCTCTATAAGGCAGTCTGTTaGACGTGTCTTACACAGATA +
Preference number: 4 (lower is better)
Translates to: RSFSFIVDSLHGAPRTSLYKAVC*TCLTQI
Trigger: TATCTGTGTAAGACACGTGCAACAGACTGCCTTATA...GAGAGACGTCCTAGGGGCACCATGCAGGCTATCAACAATGAAAGAAAAGCTTCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR CCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGCTTCGGCGTGCGTTCTaGTCTTGGTTAGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLLRRAF*SWLGFA
Trigger: TGCAAACCCTAACCAAGACCAGAACGCACGCCGAAG...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTCGGGCTCATTGTCACTaGCTTTCTCGATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSRAHCH*LSRSPV
Trigger: AACCGGTGATCGAGAAAGCCAGTGACAATGAGCCCG...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACTCATGTGCCTCATTCTaGTCACCTGCAAATGCCACC +
Preference number: 4 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENSCASF*SPANAT
Trigger: GGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGCCATGCTTACTGCCATaGTCACAAGGATGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMPCLLP*SQGCCH
Trigger: GTGGCAACATCCTTGTGATCATGGCAGTAAGCATGG...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGCAGAGGATTGATTCCTaGACAAACATAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVQRIDS*TNIANP
Trigger: TGGATTGGCTATGTTTGTTCAGGAATCAATCCTCTG...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCTGCCTCTGACTCACTaGCAGATGTATCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNLPLTH*QMYQKA
Trigger: TGCTTTCTGATACATCTGTCAGTGAGTCAGAGGCAG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGATAACTGCAGTGCAATaGAGAGCTTGCCACTTTCAC +
Preference number: 4 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQITAVQ*RACHFH
Trigger: GTGAAAGTGGCAAGCTCTTCATTGCACTGCAGTTAT...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCGCATGCTCAAGCAATTaGCTGATGTTTGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIACSSN*LMFGSV
Trigger: AACACTGCCAAACATCAGTCAATTGCTTGAGCATGC...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTGAAGAAGAGTTCATATaGAATCGGCAGGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTEEEFI*NRQVRG
Trigger: GCCCCTTACCTGCCGATTGCATATGAACTCTTCTTC...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGAAGAAGAGTTCATATaGAATCGGCAGGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREEEEFI*NRQVRG
Trigger: GCCCCTTACCTGCCGATTGCATATGAACTCTTCTTC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGGCCTATGTTATAGATaGTCGCGGGTGTTAGCTGAT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREGLCYR*SRVLAD
Trigger: ATCAGCTAACACCCGCGAGCATCTATAACATAGGCC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTTGCACAAGGAATGAATaGACCGCATTCCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTCTRNE*TAFLRF
Trigger: GAACCTGAGGAATGCGGTGCATTCATTCCTTGTGCA...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGATATAGCGCAGAGGTaGATGATGGACGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREDIAQR*MMDAVE
Trigger: TTCAACAGCGTCCATCATGCACCTCTGCGCTATATC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGATCCTCGGTGTGGCCGTaGAGTAACATCAAAGCTTGT +
Preference number: 4 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGSSVWP*SNIKAC
Trigger: ACAAGCTTTGATGTTACTGCACGGCCACACCGAGGA...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGCGGCCGTATTCCTCTTaGAGCACTTCAGGAAATCCA +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLRPYSS*STSGNP
Trigger: TGGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCG...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGTCTTGGTTAGGGTTTaGAGAGTTCTCTTCCTCGGC +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLVLVRV*RVLFLG
Trigger: GCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGAC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTCATTGTTGATAGCCTaGATGGTGCCCCTAGGACGT +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMSLLIA*MVPLGR
Trigger: ACGTCCTAGGGGCACCATGCAGGCTATCAACAATGA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTCATTGTTGATAGCCTaGATGGTGCCCCTAGGACGT +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLSLLIA*MVPLGR
Trigger: ACGTCCTAGGGGCACCATGCAGGCTATCAACAATGA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACGCAACTCTTGGAATCTaGCTGACAGGAGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNATLGI*LTGGFF
Trigger: GAAAAAGCCTCCTGTCAGGCAGATTCCAAGAGTTGC...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CGAAGCTTTTCTTTCATTGTTGATAGCCTGCATGGTGCCCCTAGGACGTCTCTCTTTAGGGACAGACATTaGAGTAAATACCAACACAAC +
Preference number: 4 (lower is better)
Translates to: RSFSFIVDSLHGAPRTSLFRDRH*SKYQHN
Trigger: GTTGTGTTGGTATTTACTGCAATGTCTGTCCCTAAA...GAGAGACGTCCTAGGGGCACCATGCAGGCTATCAACAATGAAAGAAAAGCTTCG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCACAGCAGCTCTTCCACTaGCCTTGTGGCAGACTATTG +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSQQLFH*PCGRLL
Trigger: CAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTG...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAGTTGTTTTTGAAGGATaGCGTCAGTTGGCCTATGTT +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTVVFEG*RQLAYV
Trigger: AACATAGGCCAACTGACGCCATCCTTCAAAAACAAC...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCGTTTTGTACCCCGTCTaGGAATTTGAAGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVVLYPV*EFEAST
Trigger: GGTGGACGCTTCAAATTCCCAGACGGGGTACAAAAC...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGTTTTGTACCCCGTCTaGGAATTTGAAGCGTCCACC +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSVLYPV*EFEAST
Trigger: GGTGGACGCTTCAAATTCCCAGACGGGGTACAAAAC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTCGTGCGTTCTGGTCTTaGTTAGGGTTTGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSRAFWS*LGFAEF
Trigger: GAACTCTGCAAACCCTAACCAAGACCAGAACGCACG...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCACTTCGGCGTGCGTTCTaGTCTTGGTTAGGGTTTGCA +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSLRRAF*SWLGFA
Trigger: TGCAAACCCTAACCAAGACCAGAACGCACGCCGAAG...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTCCCAGACAAAGCAGTaGCGGCAACTCTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLSQTKQ*RQLLES
Trigger: AGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCCGGGCTCATTGTCACTaGCTTTCTCGATCACCGGTT +
Preference number: 4 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSRAHCH*LSRSPV
Trigger: AACCGGTGATCGAGAAAGCCAGTGACAATGAGCCCG...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTCATGTGCCTCATTCTaGTCACCTGCAAATGCCACC +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSSCASF*SPANAT
Trigger: GGTGGCATTTGCAGGTGACCAGAATGAGGCACATGA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
3UTR CAA 72 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATaGGATTTATCTATACTGTGTGTTGAGAACACAGAC +
Preference number: 4 (lower is better)
Translates to: IQQLFHCPCGRL*DLSILCVENTD
Trigger: GTCTGTGTTCTCAACACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp TCTAAATTCTCAACTTGCATCTCTATACCGGGCTCATaGTCACTGGCTTTCTCGATCACCGGTTCATTGGTA +
Preference number: 4 (lower is better)
Translates to: SKFSTCISIPGS*SLAFSITGSLV
Trigger: TACCAATGAACCGGTGATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGAGATGCAAGTTGAGAATTTAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR TCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCCCATGCTTACTGCCATaGTCACAAGGATGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSPCLLP*SQGCCH
Trigger: GTGGCAACATCCTTGTGATCATGGCAGTAAGCATGG...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCACCATGCTTACTGCCATaGTCACAAGGATGTTGCCAC +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSPCLLP*SQGCCH
Trigger: GTGGCAACATCCTTGTGATCATGGCAGTAAGCATGG...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCTCAGAAGCTTTTCCATaGGCTTTTGGTTACAGGACT +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRISEAFP*AFGYRT
Trigger: AGTCCTGTAACCAAAAGCTCATGGAAAAGCTTCTGA...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGCTCTTGGAATCTGCCTaGCAGGAGGCTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMLLESA*QEAFSL
Trigger: TAGAGAAAAAGCCTCCTGTCAGGCAGATTCCAAGAG...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTCCTGCAAATGCCACCTaGGATGAACATGAACGTTGC +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSPANAT*DEHERC
Trigger: GCAACGTTCATGTTCATCTCAGGTGGCATTTGCAGG...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGCTGCCTCTGACTCACTaGCAGATGTATCAGAAAGCA +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMLPLTH*QMYQKA
Trigger: TGCTTTCTGATACATCTGTCAGTGAGTCAGAGGCAG...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGGCCCACGAATGAAATaGTGGCCAACACTTATTGTA +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREGPRMK*WPTLIV
Trigger: TACAATAAGTGTTGGCCATCATTTCATTCGTGGGCC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTCAGCAGGCCCACGAATaGAATGATGGCCAACACTTA +
Preference number: 4 (lower is better)
Translates to: IHSCVKWARMEILLLETLQQAHE*NDGQHL
Trigger: TAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTG...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTCAGCAGGCCCACGAATaGAATGATGGCCAACACTTA +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSQQAHE*NDGQHL
Trigger: TAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTG...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTCCACCCTTTGGCACTaGAGAAAGATTGGTCGTGTT +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLSTLWH*RKIGRV
Trigger: AACACGACCAATCTTTCTTCAGTGCCAAAGGGTGGA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGAAGAAGAGTTCATATaGAATCGGCAGGTAAGGGGC +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLEEEFI*NRQVRG
Trigger: GCCCCTTACCTGCCGATTGCATATGAACTCTTCTTC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTGCACAAGGAATGAATaGACCGCATTCCTCAGGTTC +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSCTRNE*TAFLRF
Trigger: GAACCTGAGGAATGCGGTGCATTCATTCCTTGTGCA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGGATATAGCGCAGAGGTaGATGATGGACGCTGTTGAA +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMDIAQR*MMDAVE
Trigger: TTCAACAGCGTCCATCATGCACCTCTGCGCTATATC...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGAATAGGATTACGTATTaGTACATACCGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVNRITY*YIPIQR
Trigger: TCGCTGGATCGGTATGTAGCAATACGTAATCCTATT...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276198.6
CDS-3UTR GCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTTCATTGTTGATAGCCTaGATGGTGCCCCTAGGACGT +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSSLLIA*MVPLGR
Trigger: ACGTCCTAGGGGCACCATGCAGGCTATCAACAATGA...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCGACACCATCTGTATGTaGAGAACTCATGCTAAATGC +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIDTICM*RTHAKC
Trigger: GCATTTAGCATGAGTTCTGCACATACAGATGGTGTC...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGCTAGCATATCAGCAATaGCTAGGGACATTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: SSSSTALVADYWIYLYCVLAYQQ*LGTLRS
Trigger: ACTTCTTAATGTCCCTAGCCATTGCTGATATGCTAG...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGAATAAGAACGAAATTTaGGTCGTTGAGCACGCACGT +
Preference number: 4 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQNKNEI*VVEHAR
Trigger: ACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATT...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTTCCCAGACAAAGCAGTaGCGGCAACTCTTGGAATCT +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSSQTKQ*RQLLES
Trigger: AGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGA...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp CACACAAATTTCCAGGATGCTGAGATCAAAACCCAATaGATGTTGAATCCTGGGTTGGGAAATAACTCTGGG +
Preference number: 4 (lower is better)
Translates to: HTNFQDAEIKTQ*MLNPGLGNNSG
Trigger: CCCAGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCACAGGGATAGGAACTaGTACACCTATAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNHRDRN*YTYRNC
Trigger: GCAATTTCTATAGGTGTATCAGTTCCTATCCCTGTG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS-3UTR TCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTCAGAAGCTTTTCCATaGGCTTTTGGTTACAGGACT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKERESEAFP*AFGYRT
Trigger: AGTCCTGTAACCAAAAGCTCATGGAAAAGCTTCTGA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCTATACACCAGAGGATTaGTTCCTGAACAAACATAGC +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIYTPED*FLNKHS
Trigger: GCTATGTTTGTTCAGGAATCAATCCTCTGGTGTATA...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCCTCTTGGAATCTGCCTaGCAGGAGGCTTTTTCTCTA +
Preference number: 4 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSLLESA*QEAFSL
Trigger: TAGAGAAAAAGCCTCCTGTCAGGCAGATTCCAAGAG...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGCCCACGAATGAAATaGTGGCCAACACTTATTGTA +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLGPRMK*WPTLIV
Trigger: TACAATAAGTGTTGGCCATCATTTCATTCGTGGGCC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACATCTATACTGTGTGTTaGGAACACAGACCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENIYTVC*EHRPRV
Trigger: AACCCTTGGTCTGTGTTCTCAACACACAGTATAGAT...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACATCTATACTGTGTGTTaGGAACACAGACCAAGGGTT +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNIYTVC*EHRPRV
Trigger: AACCCTTGGTCTGTGTTCTCAACACACAGTATAGAT...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTCACAGGGATAGGAACTaGTACACCGATCCAGCGATA +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLHRDRN*YTDPAI
Trigger: TATCGCTGGATCGGTGTATCAGTTCCTATCCCTGTG...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCAGGTTCACCATGATTaGTTCAGTCTTAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNQVHHD*FSLKQP
Trigger: TGGTTGCTTAAGACTGAAGCAATCATGGTGAACCTG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGTCAGTTACTATAGCTaGTACTGGGCTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREVSYYS*YWAHRN
Trigger: ATTTCTGTGAGCCCAGTAGCAGCTATAGTAACTGAC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCCTTTTCCATGCTTACTaGCATGATCACAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRILFHAY*HDHKDV
Trigger: AACATCCTTGTGATCATGGCAGTAAGCATGGAAAAG...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTCTTCTTTCTTCGGCGTaGGTTCTGGTCTTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSLLSSA*VLVLVR
Trigger: CCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAG...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGCTTCTTTCTTCGGCGTaGGTTCTGGTCTTGGTTAGG +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMLLSSA*VLVLVR
Trigger: CCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAG...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp TTAGAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACATCCCGGTTAACCAGCTaGTATGTTAAAATACCACTA +
Preference number: 4 (lower is better)
Translates to: LESSRPTNEMMANTYCNTSRLTS*YVKIPL
Trigger: TAGTGGTATTTTAACATAGCAGCTGGTTAACCGGGA...TGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTCTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCTACTATAGCTGCTACTaGGCTCACAGAAATATCAGA +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIYYSCY*AHRNIR
Trigger: TCTGATATTTCTGTGAGCCCAGTAGCAGCTATAGTA...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACAATAAGAACGAAATTTaGGTCGTTGAGCACGCACGT +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNNKNEI*VVEHAR
Trigger: ACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATT...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGCGTGCGTTCTGGTCTTaGTTAGGGTTTGCAGAGTTC +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMRAFWS*LGFAEF
Trigger: GAACTCTGCAAACCCTAACCAAGACCAGAACGCACG...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACATTTTCCATGAGCTTTTaGTTACAGGACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTFSMSF*LQDFSQ
Trigger: TTGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAA...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTGCAACGCAAATAGTTaGAGAATGCCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNCNANS*RMPFGK
Trigger: TTTACCGAAGGGCATTCTCCAACTATTTGCGTTGCA...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTTCATGCAACATACATaGCATACATGCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREFMQHT*HTCRTP
Trigger: TGGTGTCCTGCATGTATGCCATGTATGTTGCATGAA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACTTCATGCAACATACATaGCATACATGCAGGACACCA +
Preference number: 4 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENFMQHT*HTCRTP
Trigger: TGGTGTCCTGCATGTATGCCATGTATGTTGCATGAA...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp AATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTaGAATCCTGGGTTGGGAAATAACTCTGGGATCTCA +
Preference number: 4 (lower is better)
Translates to: NFQDAEIKTQLM*NPGLGNNSGIS
Trigger: TGAGATCCCAGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTTCCTTTAGTTGTTTTTaGAGGATGGCGTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSSFSCF*RMASVG
Trigger: GCCAACTGACGCCATCCTTCAAAAACAACTAAAGGA...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTCAGAGGATTGATTCCTaGACAAACATAGCCAATCCA +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSQRIDS*TNIANP
Trigger: TGGATTGGCTATGTTTGTTCAGGAATCAATCCTCTG...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCTTATCCACAGTTGTGTaGAATGGGCACGTATGGAAA +
Preference number: 4 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVLSTVV*NGHVWK
Trigger: TTTCCATACGTGCCCATTTCACACAACTGTGGATAA...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGGCTCAAGCAATTGACTaGTGTTTGGCAGTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLAQAID*CLAVLQ
Trigger: TTGCAACACTGCCAAACATCAGTCAATTGCTTGAGC...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCGCTCAAGCAATTGACTaGTGTTTGGCAGTGTTGCAA +
Preference number: 4 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSAQAID*CLAVLQ
Trigger: TTGCAACACTGCCAAACATCAGTCAATTGCTTGAGC...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGCTTTTTAAGGATTGCTaGAGGATTTTCTTCAGTCCT +
Preference number: 4 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILLFKDC*RIFFSP
Trigger: AGGACTGAAGAAAATCCTTCAGCAATCCTTAAAAAG...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGAATAGGCCAATTAGGTaGACAAGGAATGAATGCACC +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLNRPIR*TRNECT
Trigger: GGTGCATTCATTCCTTGTGCACCTAATTGGCCTATT...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGTCAGTTACTATAGCTaGTACTGGGCTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLVSYYS*YWAHRN
Trigger: ATTTCTGTGAGCCCAGTAGCAGCTATAGTAACTGAC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGATAATCATAAAGGATTaGCAGGAGAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMIIIKD*QERQGH
Trigger: ATGCCCCTGTCTCTCCTGGCAATCCTTTATGATTAT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTATAATCATAAAGGATTaGCAGGAGAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSIIIKD*QERQGH
Trigger: ATGCCCCTGTCTCTCCTGGCAATCCTTTATGATTAT...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACATCTCTACCTTATAATTaGAACGCAAATAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTSLPYN*NANSWR
Trigger: TCTCCAACTATTTGCGTTGCAATTATAAGGTAGAGA...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTGCAACTCTTGGAATCTaGCTGACAGGAGGCTTTTTC +
Preference number: 4 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSATLGI*LTGGFF
Trigger: GAAAAAGCCTCCTGTCAGGCAGATTCCAAGAGTTGC...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTTCTAAATTCTCAACTTaGATCTCTATACCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTSKFST*ISIPGS
Trigger: TGAGCCCGGTATAGAGATGCAAGTTGAGAATTTAGA...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGGATGAACATGAACGTTaGCATATGCACAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILDEHER*HMHKRK
Trigger: CTTTCTTTTGTGCATATGGCAACGTTCATGTTCATC...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCCCGGTTAACCAGCTaGTATGTTAAAATACCACTA +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNSRLTS*YVKIPL
Trigger: TAGTGGTATTTTAACATAGCAGCTGGTTAACCGGGA...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGCATACATGGCATACATaGAGGACACCATCTGTATGT +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMHTWHT*RTPSVC
Trigger: ACATACAGATGGTGTCCTGCATGTATGCCATGTATG...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGTGTTTCATACCAAACTaGACAGAACTTACGAATAGC +
Preference number: 4 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQCFIPN*TELTNS
Trigger: GCTATTCGTAAGTTCTGTGCAGTTTGGTATGAAACA...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTTTCTTTCTTCTTCGTTaGCCCCTAACTAACTACACT +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTFFLLR*PLTNYT
Trigger: AGTGTAGTTAGTTAGGGGCCAACGAAGAAGAAAGAA...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGTTGTTTTTGAAGGATaGCGTCAGTTGGCCTATGTT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSVVFEG*RQLAYV
Trigger: AACATAGGCCAACTGACGCCATCCTTCAAAAACAAC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGCTAGCATATCAGCAATaGCTAGGGACATTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKERELAYQQ*LGTLRS
Trigger: ACTTCTTAATGTCCCTAGCCATTGCTGATATGCTAG...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGAATAAGAACGAAATTTaGGTCGTTGAGCACGCACGT +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLNKNEI*VVEHAR
Trigger: ACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATT...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAATTGGTAATGAAAAATaGGCACCACATGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTIGNEK*APHDQK
Trigger: TTTCTGATCATGTGGTGCCCATTTTTCATTACCAAT...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGACACAGTTGTGTGAAATaGGCACGTATGGAAATACTG +
Preference number: 4 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGHSCVK*ARMEIL
Trigger: CAGTATTTCCATACGTGCCCATTTCACACAACTGTG...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGTCCTTTAGTTGTTTTTaGAGGATGGCGTCAGTTGGC +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMSFSCF*RMASVG
Trigger: GCCAACTGACGCCATCCTTCAAAAACAACTAAAGGA...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTATTATGATGACGATTaGAAGTGCTGGCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMYYDDD*KCWPVL
Trigger: CAAAACTGGCCAGCACTTTCAATCGTCATCATAATA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGCACAGGGATAGGAACTaGTACACCTATAGAAATTGC +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLHRDRN*YTYRNC
Trigger: GCAATTTCTATAGGTGTATCAGTTCCTATCCCTGTG...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276198.6
CDS-3UTR TCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTATACACCAGAGGATTaGTTCCTGAACAAACATAGC +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLYTPED*FLNKHS
Trigger: GCTATGTTTGTTCAGGAATCAATCCTCTGGTGTATA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTTCGGTAAATTTTGTTaGACAGAGTATACACCAGAG +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREFGKFC*TEYTPE
Trigger: CTCTGGTGTATACTCTGTTCAACAAAATTTACCGAA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACAAATTTCCAGGATGCTaGGATCAAAACCCAATTGAT +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNKFPGC*DQNPID
Trigger: ATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTT...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCTATTAAAATGCTACTaGATTCTTAGAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNLLKCY*ILREQQ
Trigger: CTGCTGCTCTCTAAGAATTCAGTAGCATTTTAATAG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCAGCATGCTCAAGCAATTaGCTGATGTTTGGCAGTGTT +
Preference number: 4 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWAACSSN*LMFGSV
Trigger: AACACTGCCAAACATCAGTCAATTGCTTGAGCATGC...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCACAGGTTCACCATGATTaGTTCAGTCTTAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSQVHHD*FSLKQP
Trigger: TGGTTGCTTAAGACTGAAGCAATCATGGTGAACCTG...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTCAGGTTCACCATGATTaGTTCAGTCTTAAGCAACCA +
Preference number: 4 (lower is better)
Translates to: IHSCVKWARMEILLLETLQVHHD*FSLKQP
Trigger: TGGTTGCTTAAGACTGAAGCAATCATGGTGAACCTG...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGGCCAATTAGGTaGACAAGGAATGAATGCACC +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSNRPIR*TRNECT
Trigger: GGTGCATTCATTCCTTGTGCACCTAATTGGCCTATT...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGACAGAAATATCAGATTaGCAAACCAATAGGCCAATT +
Preference number: 4 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQTEISD*QTNRPI
Trigger: AATTGGCCTATTGGTTTGGCAATCTGATATTTCTGT...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTCTTTTCCATGCTTACTaGCATGATCACAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSLFHAY*HDHKDV
Trigger: AACATCCTTGTGATCATGGCAGTAAGCATGGAAAAG...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAATAATCATAAAGGATTaGCAGGAGAGACAGGGGCAT +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSIIIKD*QERQGH
Trigger: ATGCCCCTGTCTCTCCTGGCAATCCTTTATGATTAT...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGAATAGGATTACGTATTaGTACATACCGATCCAGCGA +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMNRITY*YIPIQR
Trigger: TCGCTGGATCGGTATGTAGCAATACGTAATCCTATT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS-3UTR GCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTCTAAATTCTCAACTTaGATCTCTATACCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLSKFST*ISIPGS
Trigger: TGAGCCCGGTATAGAGATGCAAGTTGAGAATTTAGA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTCTAAATTCTCAACTTaGATCTCTATACCGGGCTCA +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSSKFST*ISIPGS
Trigger: TGAGCCCGGTATAGAGATGCAAGTTGAGAATTTAGA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCATGAACGTTGCCATATaGACAAAAGAAAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIMNVAI*TKEREK
Trigger: TTTCTCTCTTTCTTTTGTGCATATGGCAACGTTCAT...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTTTTAGGGACAGACATTaGAGTAAATACCAACACAAC +
Preference number: 4 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTFRDRH*SKYQHN
Trigger: GTTGTGTTGGTATTTACTGCAATGTCTGTCCCTAAA...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTTTAGGGACAGACATTaGAGTAAATACCAACACAAC +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREFRDRH*SKYQHN
Trigger: GTTGTGTTGGTATTTACTGCAATGTCTGTCCCTAAA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp TTAGAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAAAATCGATGGATTCATaGAACATACATGGCATACAT +
Preference number: 4 (lower is better)
Translates to: LESSRPTNEMMANTYCNTKSMDS*NIHGIH
Trigger: ATGTATGCCATGTATGTTGCATGAATCCATCGATTT...TGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTCTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCTTCTTTCTTCTTCGTTaGCCCCTAACTAACTACACT +
Preference number: 4 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVFFLLR*PLTNYT
Trigger: AGTGTAGTTAGTTAGGGGCCAACGAAGAAGAAAGAA...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTTCTTTCTTCTTCGTTaGCCCCTAACTAACTACACT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSFFLLR*PLTNYT
Trigger: AGTGTAGTTAGTTAGGGGCCAACGAAGAAGAAAGAA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTACTATAGCTGCTACTaGGCTCACAGAAATATCAGA +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMYYSCY*AHRNIR
Trigger: TCTGATATTTCTGTGAGCCCAGTAGCAGCTATAGTA...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGATTGGTAATGAAAAATaGGCACCACATGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILIGNEK*APHDQK
Trigger: TTTCTGATCATGTGGTGCCCATTTTTCATTACCAAT...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTTTTCCATGAGCTTTTaGTTACAGGACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNFSMSF*LQDFSQ
Trigger: TTGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAA...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGTGCAACGCAAATAGTTaGAGAATGCCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLCNANS*RMPFGK
Trigger: TTTACCGAAGGGCATTCTCCAACTATTTGCGTTGCA...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCACTTCCACTGCCCTTGTaGCAGACTATTGGATTTATC +
Preference number: 4 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWALPLPL*QTIGFI
Trigger: GATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAG...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR CCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGCACTGAAGAAAGATTaGTCGTGTTTCAATCACGTT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSALKKD*SCFNHV
Trigger: AACGTGATTGAAACACGACCAATCTTTCTTCAGTGC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371951.5
CDS-3UTR TCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTTATTATGATGACGATTaGAAGTGCTGGCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSYYDDD*KCWPVL
Trigger: CAAAACTGGCCAGCACTTTCAATCGTCATCATAATA...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGTATTATGATGACGATTaGAAGTGCTGGCCAGTTTTG +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLYYDDD*KCWPVL
Trigger: CAAAACTGGCCAGCACTTTCAATCGTCATCATAATA...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCATCAGAAGCTTTTCCATaGGCTTTTGGTTACAGGACT +
Preference number: 4 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWASEAFP*AFGYRT
Trigger: AGTCCTGTAACCAAAAGCTCATGGAAAAGCTTCTGA...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR TCA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTTCGGTAAATTTTGTTaGACAGAGTATACACCAGAG +
Preference number: 4 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLFGKFC*TEYTPE
Trigger: CTCTGGTGTATACTCTGTTCAACAAAATTTACCGAA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTAAATTTCCAGGATGCTaGGATCAAAACCCAATTGAT +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSKFPGC*DQNPID
Trigger: ATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTT...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR TCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCATTATCCACAGTTGTGTaGAATGGGCACGTATGGAAA +
Preference number: 4 (lower is better)
Translates to: LLLSAILPYINTNRWIHALSTVV*NGHVWK
Trigger: TTTCCATACGTGCCCATTTCACACAACTGTGGATAA...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGCAAATAGAGACTGTATaGGTTTCCTCAAATACAGCA +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMQIETV*VSSNTA
Trigger: TGCTGTATTTGAGGAAACTCATACAGTCTCTATTTG...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGGTAAAACATGTGCTATaGGCTTGCCCTGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMVKHVL*ACPDSS
Trigger: TGAACTATCAGGGCAAGCTCATAGCACATGTTTTAC...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTGTAAAACATGTGCTATaGGCTTGCCCTGATAGTTCA +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLVKHVL*ACPDSS
Trigger: TGAACTATCAGGGCAAGCTCATAGCACATGTTTTAC...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACACAGAAATATCAGATTaGCAAACCAATAGGCCAATT +
Preference number: 4 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENTEISD*QTNRPI
Trigger: AATTGGCCTATTGGTTTGGCAATCTGATATTTCTGT...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCAGTCAGTTACTATAGCTaGTACTGGGCTCACAGAAAT +
Preference number: 4 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWAVSYYS*YWAHRN
Trigger: ATTTCTGTGAGCCCAGTAGCAGCTATAGTAACTGAC...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGATGAACATGAACGTTaGCATATGCACAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSDEHER*HMHKRK
Trigger: CTTTCTTTTGTGCATATGGCAACGTTCATGTTCATC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTAGAACTCATGCTAAATaGATGCTGTGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSRTHAK*MLCFFS
Trigger: GCTGAAGAAACACAGCATGCATTTAGCATGAGTTCT...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGGACACCATCTGTATGTaGAGAACTCATGCTAAATGC +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMDTICM*RTHAKC
Trigger: GCATTTAGCATGAGTTCTGCACATACAGATGGTGTC...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCACATACATGGCATACATaGAGGACACCATCTGTATGT +
Preference number: 4 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWAHTWHT*RTPSVC
Trigger: ACATACAGATGGTGTCCTGCATGTATGCCATGTATG...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGAAATCGATGGATTCATaGAACATACATGGCATACAT +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREKSMDS*NIHGIH
Trigger: ATGTATGCCATGTATGTTGCATGAATCCATCGATTT...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCTGTTTCATACCAAACTaGACAGAACTTACGAATAGC +
Preference number: 4 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVCFIPN*TELTNS
Trigger: GCTATTCGTAAGTTCTGTGCAGTTTGGTATGAAACA...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGTATAAGGCAGTCTGTTaGACGTGTCTTACACAGATA +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLYKAVC*TCLTQI
Trigger: TATCTGTGTAAGACACGTGCAACAGACTGCCTTATA...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCATACTATAGCTGCTACTaGGCTCACAGAAATATCAGA +
Preference number: 4 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSYYSCY*AHRNIR
Trigger: TCTGATATTTCTGTGAGCCCAGTAGCAGCTATAGTA...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGATTGGTAATGAAAAATaGGCACCACATGATCAGAAA +
Preference number: 4 (lower is better)
Translates to: QMPPEMNMNVAICTKEREIGNEK*APHDQK
Trigger: TTTCTGATCATGTGGTGCCCATTTTTCATTACCAAT...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGTGCAACGCAAATAGTTaGAGAATGCCCTTCGGTAAA +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMCNANS*RMPFGK
Trigger: TTTACCGAAGGGCATTCTCCAACTATTTGCGTTGCA...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCACACAGTTGTGTGAAATaGGCACGTATGGAAATACTG +
Preference number: 4 (lower is better)
Translates to: LLLSAILPYINTNRWIHAHSCVK*ARMEIL
Trigger: CAGTATTTCCATACGTGCCCATTTCACACAACTGTG...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp TACCAAACTGCACAGAACTTACGAATAGCACACAACTaGAGGATAATTACCAGGTTGGGTACTATTAAGTAC +
Preference number: 4 (lower is better)
Translates to: YQTAQNLRIAHN*RIITRLGTIKY
Trigger: GTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGCAGTTTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTTTCGGTAAATTTTGTTaGACAGAGTATACACCAGAG +
Preference number: 4 (lower is better)
Translates to: IHSCVKWARMEILLLETLFGKFC*TEYTPE
Trigger: CTCTGGTGTATACTCTGTTCAACAAAATTTACCGAA...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGCTATTAAAATGCTACTaGATTCTTAGAGAGCAGCAG +
Preference number: 4 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLLLKCY*ILREQQ
Trigger: CTGCTGCTCTCTAAGAATTCAGTAGCATTTTAATAG...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGACAGAAATATCAGATTaGCAAACCAATAGGCCAATT +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMTEISD*QTNRPI
Trigger: AATTGGCCTATTGGTTTGGCAATCTGATATTTCTGT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTCTTTTCCATGCTTACTaGCATGATCACAAGGATGTT +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLLFHAY*HDHKDV
Trigger: AACATCCTTGTGATCATGGCAGTAAGCATGGAAAAG...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGCAAATAGTTGGAGAATaGCCTTCGGTAAATTTTGTT +
Preference number: 4 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMQIVGE*PSVNFV
Trigger: AACAAAATTTACCGAAGGGCATTCTCCAACTATTTG...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTCTCTACCTTATAATTaGAACGCAAATAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSSLPYN*NANSWR
Trigger: TCTCCAACTATTTGCGTTGCAATTATAAGGTAGAGA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTATGAACGTTGCCATATaGACAAAAGAAAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSMNVAI*TKEREK
Trigger: TTTCTCTCTTTCTTTTGTGCATATGGCAACGTTCAT...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR GCA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCGATGAACATGAACGTTaGCATATGCACAAAAGAAAG +
Preference number: 4 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSDEHER*HMHKRK
Trigger: CTTTCTTTTGTGCATATGGCAACGTTCATGTTCATC...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTAGAACTCATGCTAAATaGATGCTGTGTTTCTTCAGC +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLRTHAK*MLCFFS
Trigger: GCTGAAGAAACACAGCATGCATTTAGCATGAGTTCT...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCACTAGCATATCAGCAATaGCTAGGGACATTAAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLLSAILPYINTNRWIHALAYQQ*LGTLRS
Trigger: ACTTCTTAATGTCCCTAGCCATTGCTGATATGCTAG...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTTTTTCCATGAGCTTTTaGTTACAGGACTTCTCACAA +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSFSMSF*LQDFSQ
Trigger: TTGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAA...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp CTTGTGGCAGACTATTGGATTTATCTATACTGTGTGTaGAGAACACAGACCAAGGGTTTTAGAAATTCAGAT +
Preference number: 4 (lower is better)
Translates to: LVADYWIYLYCV*RTQTKGFRNSD
Trigger: ATCTGAATTTCTAAAACCCTTGGTCTGTGTTCTCAACACACAGTATAGATAAATCCAATAGTCTGCCACAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACATATACACCAGAGGATTaGTTCCTGAACAAACATAGC +
Preference number: 4 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTYTPED*FLNKHS
Trigger: GCTATGTTTGTTCAGGAATCAATCCTCTGGTGTATA...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTACACTACTTCAGATCTaGATGCATGGTCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSTLLQI*MHGLFK
Trigger: CTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGT...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR TCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTACACTACTTCAGATCTaGATGCATGGTCTTTTTAAG +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLTLLQI*MHGLFK
Trigger: CTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGT...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTCAAATAGTTGGAGAATaGCCTTCGGTAAATTTTGTT +
Preference number: 4 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSQIVGE*PSVNFV
Trigger: AACAAAATTTACCGAAGGGCATTCTCCAACTATTTG...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCAAACACTTGTATACTCTaGACACAGCATAGACTGAAT +
Preference number: 4 (lower is better)
Translates to: LLLSAILPYINTNRWIHANTCIL*TQHRLN
Trigger: ATTCAGTCTATGCTGTGTGCAGAGTATACAAGTGTT...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCAAACACTTGTATACTCTaGACACAGCATAGACTGAAT +
Preference number: 4 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWANTCIL*TQHRLN
Trigger: ATTCAGTCTATGCTGTGTGCAGAGTATACAAGTGTT...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR GCA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTGATGTTTGGCAGTGTTaGAAATCAAATAGAGACTGT +
Preference number: 4 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSDVWQC*KSNRDC
Trigger: ACAGTCTCTATTTGATTTGCAACACTGCCAAACATC...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGTCTCTACCTTATAATTaGAACGCAAATAGTTGGAGA +
Preference number: 4 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMSLPYN*NANSWR
Trigger: TCTCCAACTATTTGCGTTGCAATTATAAGGTAGAGA...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR GCA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTATGAACGTTGCCATATaGACAAAAGAAAGAGAGAAA +
Preference number: 4 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLMNVAI*TKEREK
Trigger: TTTCTCTCTTTCTTTTGTGCATATGGCAACGTTCAT...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp TTGACTTTCATGTTATATTTGGGCATGCTCAAGCAATaGACTGATGTTTGGCAGTGTTGCAAATCAAATAGA +
Preference number: 4 (lower is better)
Translates to: LTFMLYLGMLKQ*TDVWQCCKSNR
Trigger: TCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAACATGAAAGTCAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
3UTR CAA 72 bp TTACGAATAGCACACAACTTGAGGATAATTACCAGGTaGGGTACTATTAAGTACTACTACTTGATGACACAA +
Preference number: 4 (lower is better)
Translates to: LRIAHNLRIITR*GTIKYYYLMTQ
Trigger: TTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS TCA 90 bp GACTCGGCTGCAATCGCCCAGCGGAGCCCGCGGCAGTCGGTGCGCTaGGCTGCGCTGCGCTGCGCGCCGCAACCTCGCGCCTCGGCGGAG +
Preference number: 5 (lower is better)
Translates to: DSAAIAQRSPRQSVR*AALRCAPQPRASAE
Trigger: CTCCGCCGAGGCGCGAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCGCGGGCTCCGCTGGGCGATTGCAGCCGAGTC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 90 bp GGCTGCAATCGCCCAGCGGAGCCCGCGGCAGTCGGTGCGCTGAGCTaGGCTGCGCTGCGCGCCGCAACCTCGCGCCTCGGCGGAGGGAGA +
Preference number: 5 (lower is better)
Translates to: GCNRPAEPAAVGALS*AALRAATSRLGGGR
Trigger: TCTCCCTCCGCCGAGGCGCGAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCGCGGGCTCCGCTGGGCGATTGCAGCC
77% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 90 bp CAATCGCCCAGCGGAGCCCGCGGCAGTCGGTGCGCTGAGCTGCGCTaGGCTGCGCGCCGCAACCTCGCGCCTCGGCGGAGGGAGAGGAAT +
Preference number: 5 (lower is better)
Translates to: QSPSGARGSRCAELR*AARRNLAPRRRERN
Trigger: ATTCCTCTCCCTCCGCCGAGGCGCGAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCGCGGGCTCCGCTGGGCGATTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 90 bp CTGCATGGTGCCCCTAGGACGTCTCTCCTTCTTCTTTCTTCGGCGTaGGTTCTGGTCTTGGTTAGGGTTTGCAGAGTTCTCTTCCTCGGC +
Preference number: 5 (lower is better)
Translates to: LHGAPRTSLLLLSSA*VLVLVRVCRVLFLG
Trigger: GCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGACGTCCTAGGGGCACCATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 90 bp GTGCCCCTAGGACGTCTCTCCTTCTTCTTTCTTCGGCGTGCGTTCTaGTCTTGGTTAGGGTTTGCAGAGTTCTCTTCCTCGGCCGTATTC +
Preference number: 5 (lower is better)
Translates to: VPLGRLSFFFLRRAF*SWLGFAEFSSSAVF
Trigger: GAATACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGACGTCCTAGGGGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 90 bp GACGACTCCGACGACAACGATGTACAGACAGAAGAAGAGTTCATATaGAATCGGCAGGTAAGGGGCAAGGCAGGCCAATGGAGCAGCCAA +
Preference number: 5 (lower is better)
Translates to: DDSDDNDVQTEEEFI*NRQVRGKAGQWSSQ
Trigger: TTGGCTGCTCCATTGGCCTGCCTTGCCCCTTACCTGCCGATTGCATATGAACTCTTCTTCTGTCTGTACATCGTTGTCGTCGGAGTCGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 90 bp CTCCTTCTTCTTTCTTCGGCGTGCGTTCTGGTCTTGGTTAGGGTTTaGAGAGTTCTCTTCCTCGGCCGTATTCCTCTTGCAGCACTTCAG +
Preference number: 5 (lower is better)
Translates to: LLLLSSACVLVLVRV*RVLFLGRIPLAALQ
Trigger: CTGAAGTGCTGCAAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 90 bp CTAGGACGTCTCTCCTTCTTCTTTCTTCGGCGTGCGTTCTGGTCTTaGTTAGGGTTTGCAGAGTTCTCTTCCTCGGCCGTATTCCTCTTG +
Preference number: 5 (lower is better)
Translates to: LGRLSFFFLRRAFWS*LGFAEFSSSAVFLL
Trigger: CAAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGACGTCCTAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CGAAGCTTTTCTTTCATTGTTGATAGCCTGCATGGTGCCCCTAGGACGTCTCTCACGAAATTTGGGTCGTaGAGCACGCACGTCGTGTTG +
Preference number: 5 (lower is better)
Translates to: RSFSFIVDSLHGAPRTSLTKFGS*STHVVL
Trigger: CAACACGACGTGCGTGCTCAACGACCCAAATTTCGT...GAGAGACGTCCTAGGGGCACCATGCAGGCTATCAACAATGAAAGAAAAGCTTCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR CAA 90 bp CTCCCAGACAAAGCAGTGGCGGCAACTCTTGGAATCTGCCTGACAGGAGGCTTTAAAACCCAATTGATGTaGAATCCTGGGTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: LPDKAVAATLGICLTGGFKTQLM*NPGLGN
Trigger: ATTTCCCAACCCAGGATTCAACATCAATTGGGTTTT...AAAGCCTCCTGTCAGGCAGATTCCAAGAGTTGCCGCCACTGCTTTGTCTGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS GCA 90 bp CCGCTATCTTACTCTAGCTTAGTAACTGACCACCTCCAGCATCTCTaGACTAATCGCGTCTTCTTTCTTCTTCGTTGGCCCCTAACTAAC +
Preference number: 5 (lower is better)
Translates to: PLSYSSLVTDHLQHL*TNRVFFLLRWPLTN
Trigger: GTTAGTTAGGGGCCAACGAAGAAGAAAGAAGACGCGATTAGTGCAGAGATGCTGGAGGTGGTCAGTTACTAAGCTAGAGTAAGATAGCGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 90 bp CAGCGGTATGAAGAAAGCTACGAAGGACCCAATAAGAACGAAATTTaGGTCGTTGAGCACGCACGTCGTGTTGTTCACGAACACCTTTTC +
Preference number: 5 (lower is better)
Translates to: QRYEESYEGPNKNEI*VVEHARRVVHEHLF
Trigger: GAAAAGGTGTTCGTGAACAACACGACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATTGGGTCCTTCGTAGCTTTCTTCATACCGCTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGACCCCGTCTGGGAATTaGAAGCGTCCACCATCGGAG +
Preference number: 5 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLTPSGN*KRPPSE
Trigger: CTCCGATGGTGGACGCTTCAAATTCCCAGACGGGGT...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGACCCCGTCTGGGAATTaGAAGCGTCCACCATCGGAG +
Preference number: 5 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMTPSGN*KRPPSE
Trigger: CTCCGATGGTGGACGCTTCAAATTCCCAGACGGGGT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp TTAGAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACATCGGCCGTATTCCTCTaGCAGCACTTCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: LESSRPTNEMMANTYCNTSAVFL*QHFRKS
Trigger: GGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCGA...TGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTCTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACAGCTCTTCCACTGCCCTaGTGGCAGACTATTGGATTT +
Preference number: 5 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTALPLP*WQTIGF
Trigger: AAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGC...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGAGCACGCACGTCGTGTaGTTCACGAACACCTTTTCT +
Preference number: 5 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQSTHVV*FTNTFS
Trigger: AGAAAAGGTGTTCGTGAACAACACGACGTGCGTGCT...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACTCGGCCGTATTCCTCTaGCAGCACTTCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENSAVFL*QHFRKS
Trigger: GGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCGA...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATACTCTGCACACAGCATAGACTGAATGGCCTGACTTTAGCAATGCTTGAAAACGCGTGCGTTCTGGTCTaGGTTAGGGTTTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: ILCTQHRLNGLTLAMLENACVLV*VRVCRV
Trigger: AACTCTGCAAACCCTAACCAAGACCAGAACGCACGC...GTTTTCAAGCATTGCTAAAGTCAGGCCATTCAGTCTATGCTGTGTGCAGAGTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGTCTATACCGGGCTCATaGTCACTGGCTTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQSIPGS*SLAFSI
Trigger: GATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGA...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTACCCCGTCTGGGAATTaGAAGCGTCCACCATCGGAG +
Preference number: 5 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLTPSGN*KRPPSE
Trigger: CTCCGATGGTGGACGCTTCAAATTCCCAGACGGGGT...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGCATAATCATAAAGGATaGCCAGGAGAGACAGGGGCA +
Preference number: 5 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQHNHKG*PGETGA
Trigger: TGCCCCTGTCTCTCCTGGCAATCCTTTATGATTATG...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGAGCACGCACGTCGTGTaGTTCACGAACACCTTTTCT +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKERESTHVV*FTNTFS
Trigger: AGAAAAGGTGTTCGTGAACAACACGACGTGCGTGCT...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTACGAAATTTGGGTCGTaGAGCACGCACGTCGTGTTG +
Preference number: 5 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSTKFGS*STHVVL
Trigger: CAACACGACGTGCGTGCTCAACGACCCAAATTTCGT...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTTCGGCCGTATTCCTCTaGCAGCACTTCAGGAAATCC +
Preference number: 5 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSSAVFL*QHFRKS
Trigger: GGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCGA...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGCGTGCGTTCTGGTCTaGGTTAGGGTTTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLACVLV*VRVCRV
Trigger: AACTCTGCAAACCCTAACCAAGACCAGAACGCACGC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGCCCAGACAGTTGTTTTaGAAGGATGGCGTCAGTTGG +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKEREPRQLF*KDGVSW
Trigger: CCAACTGACGCCATCCTTCAAAAACAACTGTCTGGG...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371951.5
CDS TCA 90 bp CACAAGGATGTTGCCACCTATTGTCATGATTATTATGATGACGATTaGAAGTGCTGGCCAGTTTTGTACCCCGTCTGGGAATTTGAAGCG +
Preference number: 5 (lower is better)
Translates to: HKDVATYCHDYYDDD*KCWPVLYPVWEFEA
Trigger: CGCTTCAAATTCCCAGACGGGGTACAAAACTGGCCAGCACTTTCAATCGTCATCATAATAATCATGACAATAGGTGGCAACATCCTTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGAAGTGCTGGCCAGTTTaGTACCCCGTCTGGGAATTT +
Preference number: 5 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLKCWPV*YPVWEF
Trigger: AAATTCCCAGACGGGGTACAAAACTGGCCAGCACTT...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACCATAATCATAAAGGATaGCCAGGAGAGACAGGGGCA +
Preference number: 5 (lower is better)
Translates to: QDAEIKTQLMLNPGLGNNHNHKG*PGETGA
Trigger: TGCCCCTGTCTCTCCTGGCAATCCTTTATGATTATG...GTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGCCTTAGTCCGCGAATaGAAACGGCTATGCTCAATA +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKEREALVRE*KRLCSI
Trigger: TATTGAGCATAGCCGTTTCAATTCGCGGACTAAGGC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGCTTTTCTTTCATTGTaGATAGCCTGCATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKEREAFLSL*IACMVP
Trigger: GGGCACCATGCAGGCTATCAACAATGAAAGAAAAGC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGTCTATACCGGGCTCATaGTCACTGGCTTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLSIPGS*SLAFSI
Trigger: GATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGA...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGAGTGCAATGAAGAGCTaGCCACTTTCACAAATTAGC +
Preference number: 5 (lower is better)
Translates to: SSSSTALVADYWIYLYCVSAMKS*PLSQIS
Trigger: GCTAATTTGTGAAAGTGGCAAGCTCTTCATTGCACT...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp AGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGTGTGCGAATAGCACACAACTaGAGGATAATTACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: SSSSTALVADYWIYLYCVRIAHN*RIITRL
Trigger: CAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCG...CACACAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS GCA 90 bp ATGTCAGTTACTATAGCTGCTACTGGGCTCACAGAAATATCAGATTaGCAAACCAATAGGCCAATTAGGTGCACAAGGAATGAATGCACC +
Preference number: 5 (lower is better)
Translates to: MSVTIAATGLTEISD*QTNRPIRCTRNECT
Trigger: GGTGCATTCATTCCTTGTGCACCTAATTGGCCTATTGGTTTGGCAATCTGATATTTCTGTGAGCCCAGTAGCAGCTATAGTAACTGACAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGGAAGGATGGCGTCAGTaGGCCTATGTTATAGATGCT +
Preference number: 5 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMEGWRQ*AYVIDA
Trigger: AGCATCTATAACATAGGCCAACTGACGCCATCCTTC...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGAAGGATGGCGTCAGTaGGCCTATGTTATAGATGCT +
Preference number: 5 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSEGWRQ*AYVIDA
Trigger: AGCATCTATAACATAGGCCAACTGACGCCATCCTTC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAAGTGCTGGCCAGTTTaGTACCCCGTCTGGGAATTT +
Preference number: 5 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSKCWPV*YPVWEF
Trigger: AAATTCCCAGACGGGGTACAAAACTGGCCAGCACTT...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTAAGTGCTGGCCAGTTTaGTACCCCGTCTGGGAATTT +
Preference number: 5 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSKCWPV*YPVWEF
Trigger: AAATTCCCAGACGGGGTACAAAACTGGCCAGCACTT...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTACGAAATTTGGGTCGTaGAGCACGCACGTCGTGTTG +
Preference number: 5 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLTKFGS*STHVVL
Trigger: CAACACGACGTGCGTGCTCAACGACCCAAATTTCGT...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CACTCACACTACTTCAGATCTGAATGCATGGTCTTTTTAAGGATTGCTGAAGGAGCTTTTCTTTCATTGTaGATAGCCTGCATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: HSHYFRSECMVFLRIAEGAFLSL*IACMVP
Trigger: GGGCACCATGCAGGCTATCAACAATGAAAGAAAAGC...TCCTTCAGCAATCCTTAAAAAGACCATGCATTCAGATCTGAAGTAGTGTGAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCGAAGCTTTTCTTTCATaGTTGATAGCCTGCATGGTG +
Preference number: 5 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIEAFLS*LIACMV
Trigger: CACCATGCAGGCTATCAACAATGAAAGAAAAGCTTC...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCTCTATACCGGGCTCATaGTCACTGGCTTTCTCGATC +
Preference number: 5 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSSIPGS*SLAFSI
Trigger: GATCGAGAAAGCCAGTGACAATGAGCCCGGTATAGA...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CACTTTCACAAATTAGCTGCAGCCTTTTCCTGCACTAGAGAGTTTGGAAGGATCGAGATCAAAACCCAATaGATGTTGAATCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: HFHKLAAAFSCTREFGRIEIKTQ*MLNPGL
Trigger: CAACCCAGGATTCAACATCAATTGGGTTTTGATCTC...GATCCTTCCAAACTCTCTAGTGCAGGAAAAGGCTGCAGCTAATTTGTGAAAGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGAGTGCAATGAAGAGCTaGCCACTTTCACAAATTAGC +
Preference number: 5 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILSAMKS*PLSQIS
Trigger: GCTAATTTGTGAAAGTGGCAAGCTCTTCATTGCACT...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GAGAGCAGCAGGCCCACGAATGAAATGATGGCCAACACTTATTGTAACACAACACCTTGTGGCAGACTATaGGATTTATCTATACTGTGT +
Preference number: 5 (lower is better)
Translates to: ESSRPTNEMMANTYCNTTPCGRL*DLSILC
Trigger: ACACAGTATAGATAAATCCAATAGTCTGCCACAAGG...TGTTGTGTTACAATAAGTGTTGGCCATCATTTCATTCGTGGGCCTGCTGCTCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS GCA 90 bp GGATTACGTATTGCTACATACCGATCCAGCGATATAGCGCAGAGGTaGATGATGGACGCTGTTGAAAATAAAACATCTAAAGAAATCCAG +
Preference number: 5 (lower is better)
Translates to: GLRIATYRSSDIAQR*MMDAVENKTSKEIQ
Trigger: CTGGATTTCTTTAGATGTTTTATTTTCAACAGCGTCCATCATGCACCTCTGCGCTATATCGCTGGATCGGTATGTAGCAATACGTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS GCA 90 bp ATAGCAATCTTCATGATGGCCTTAGTCCGCGAATTGAAACGGCTATaGTCAATAGGATTACGTATTGCTACATACCGATCCAGCGATATA +
Preference number: 5 (lower is better)
Translates to: IAIFMMALVRELKRL*SIGLRIATYRSSDI
Trigger: TATATCGCTGGATCGGTATGTAGCAATACGTAATCCTATTGAGCATAGCCGTTTCAATTCGCGGACTAAGGCCATCATGAAGATTGCTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS-3UTR CAA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGCCACCATCGGAGGTATaGAAAATGTCAGTTACTATA +
Preference number: 5 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILPPSEV*KMSVTI
Trigger: TATAGTAACTGACATTTTCAATACCTCCGATGGTGG...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGCATAATCATAAAGGATaGCCAGGAGAGACAGGGGCA +
Preference number: 5 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLHNHKG*PGETGA
Trigger: TGCCCCTGTCTCTCCTGGCAATCCTTTATGATTATG...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp AAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTAGCACGCACGTCGTGTaGTTCACGAACACCTTTTCT +
Preference number: 5 (lower is better)
Translates to: KQLTDVWQCCKSNRDCMSSTHVV*FTNTFS
Trigger: AGAAAAGGTGTTCGTGAACAACACGACGTGCGTGCT...ACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAACATCAGTCAATTGCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACAGCGTGCGTTCTGGTCTaGGTTAGGGTTTGCAGAGTT +
Preference number: 5 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTACVLV*VRVCRV
Trigger: AACTCTGCAAACCCTAACCAAGACCAGAACGCACGC...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGGCTTTTCTTTCATTGTaGATAGCCTGCATGGTGCCC +
Preference number: 5 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLAFLSL*IACMVP
Trigger: GGGCACCATGCAGGCTATCAACAATGAAAGAAAAGC...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTGAAGCTTTTCTTTCATaGTTGATAGCCTGCATGGTG +
Preference number: 5 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTEAFLS*LIACMV
Trigger: CACCATGCAGGCTATCAACAATGAAAGAAAAGCTTC...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGGAAGCTTTTCTTTCATaGTTGATAGCCTGCATGGTG +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKEREEAFLS*LIACMV
Trigger: CACCATGCAGGCTATCAACAATGAAAGAAAAGCTTC...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGCTTTTCCATGAGCTTTaGGTTACAGGACTTCTCACA +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKERELFHEL*VTGLLT
Trigger: TGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAAG...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp CAAATGCCACCTGAGATGAACATGAACGTTGCCATATGCACAAAAGAAAGAGAGTCCTACATATGTAGCTaGTACCGTAGGAAAAGACTG +
Preference number: 5 (lower is better)
Translates to: QMPPEMNMNVAICTKERESYICS*YRRKRL
Trigger: CAGTCTTTTCCTACGGTACAAGCTACATATGTAGGA...CTCTCTTTCTTTTGTGCATATGGCAACGTTCATGTTCATCTCAGGTGGCATTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ATGGATTCATGCAACATACATGGCATACATGCAGGACACCATCTGTATGTGCAGCCTTGTGGCAGACTATaGGATTTATCTATACTGTGT +
Preference number: 5 (lower is better)
Translates to: MDSCNIHGIHAGHHLYVQPCGRL*DLSILC
Trigger: ACACAGTATAGATAAATCCAATAGTCTGCCACAAGG...CTGCACATACAGATGGTGTCCTGCATGTATGCCATGTATGTTGCATGAATCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAGGCATGCTCAAGCAATaGACTGATGTTTGGCAGTGT +
Preference number: 5 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSGMLKQ*TDVWQC
Trigger: ACACTGCCAAACATCAGTCAATTGCTTGAGCATGCC...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATACAGCAGCTCTTCCACTGCCCTTGTGGCAGACTATTGGATTTATCTATACTGGCAAGGCAGGTAGACTaGACTTTCATGTTATATTTG +
Preference number: 5 (lower is better)
Translates to: IQQLFHCPCGRLLDLSILARQVD*TFMLYL
Trigger: CAAATATAACATGAAAGTCAAGTCTACCTGCCTTGC...CAGTATAGATAAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGCTGCTGTAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTGGCACTGAAGAAAGATaGGTCGTGTTTCAATCACGT +
Preference number: 5 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSGTEER*VVFQSR
Trigger: ACGTGATTGAAACACGACCAATCTTTCTTCAGTGCC...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000371951.5
CDS-3UTR CAA 90 bp GTTACAGGACTTCTCACAAAGAACAGACAGAATATTGGTAATGAAAAATGGGCAGAAGGATGGCGTCAGTaGGCCTATGTTATAGATGCT +
Preference number: 5 (lower is better)
Translates to: VTGLLTKNRQNIGNEKWAEGWRQ*AYVIDA
Trigger: AGCATCTATAACATAGGCCAACTGACGCCATCCTTC...TGCCCATTTTTCATTACCAATATTCTGTCTGTTCTTTGTGAGAAGTCCTGTAAC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS-3UTR CAA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCAGCCTTAGTCCGCGAATaGAAACGGCTATGCTCAATA +
Preference number: 5 (lower is better)
Translates to: LLLSAILPYINTNRWIHAALVRE*KRLCSI
Trigger: TATTGAGCATAGCCGTTTCAATTCGCGGACTAAGGC...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000276198.6
CDS-3UTR CAA 90 bp ACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGAGATCAAAACCCAATaGATGTTGAATCCTGGGTTG +
Preference number: 5 (lower is better)
Translates to: TNFQDAEIKTQLMLNPGLEIKTQ*MLNPGL
Trigger: CAACCCAGGATTCAACATCAATTGGGTTTTGATCTC...CAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACAGCTCTTCCACTGCCCTaGTGGCAGACTATTGGATTT +
Preference number: 5 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTALPLP*WQTIGF
Trigger: AAATCCAATAGTCTGCCACAAGGGCAGTGGAAGAGC...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCCGAATAGCACACAACTaGAGGATAATTACCAGGTTG +
Preference number: 5 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVRIAHN*RIITRL
Trigger: CAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCG...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CTTTGTGTGAAGCACACAAATTTCCAGGATGCTGAGATCAAAACCCAATTGATGATGATCACAAGGATGTaGCCACCTATTGTCATGATT +
Preference number: 5 (lower is better)
Translates to: LCVKHTNFQDAEIKTQLMMITRM*PPIVMI
Trigger: AATCATGACAATAGGTGGCAACATCCTTGTGATCAT...CATCAATTGGGTTTTGATCTCAGCATCCTGGAAATTTGTGTGCTTCACACAAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp GTTTGGCAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCCTTTTCCATGAGCTTTaGGTTACAGGACTTCTCACA +
Preference number: 5 (lower is better)
Translates to: VWQCCKSNRDCMSFLKYSLFHEL*VTGLLT
Trigger: TGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAAG...GCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTGCCAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GCACACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGCTTTTCCATGAGCTTTaGGTTACAGGACTTCTCACA +
Preference number: 5 (lower is better)
Translates to: AHNLRIITRLGTIKYYYLLFHEL*VTGLLT
Trigger: TGTGAGAAGTCCTGTAACCAAAAGCTCATGGAAAAG...CAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CAGTGTTGCAAATCAAATAGAGACTGTATGAGTTTCCTCAAATACAGCAGCTCTTCCTACATATGTAGCTaGTACCGTAGGAAAAGACTG +
Preference number: 5 (lower is better)
Translates to: QCCKSNRDCMSFLKYSSSSYICS*YRRKRL
Trigger: CAGTCTTTTCCTACGGTACAAGCTACATATGTAGGA...AGAGCTGCTGTATTTGAGGAAACTCATACAGTCTCTATTTGATTTGCAACACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GATGCTGAGATCAAAACCCAATTGATGTTGAATCCTGGGTTGGGAAATAACTCTAAAACCCAATTGATGTaGAATCCTGGGTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: DAEIKTQLMLNPGLGNNSKTQLM*NPGLGN
Trigger: ATTTCCCAACCCAGGATTCAACATCAATTGGGTTTT...AGAGTTATTTCCCAACCCAGGATTCAACATCAATTGGGTTTTGATCTCAGCATC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS-3UTR CAA 90 bp ATCCACAGTTGTGTGAAATGGGCACGTATGGAAATACTGTTACTAGAAACACTTTATCTATACTGTGTGTaGAGAACACAGACCAAGGGT +
Preference number: 5 (lower is better)
Translates to: IHSCVKWARMEILLLETLYLYCV*RTQTKG
Trigger: ACCCTTGGTCTGTGTTCTCAACACACAGTATAGATA...AAGTGTTTCTAGTAACAGTATTTCCATACGTGCCCATTTCACACAACTGTGGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp GCACAGAACTTACGAATAGCACACAACTTGAGGATAATTACCAGGTTGGGTACTACTTTCATGTTATATTaGGGCATGCTCAAGCAATTG +
Preference number: 5 (lower is better)
Translates to: AQNLRIAHNLRIITRLGTTFMLY*GMLKQL
Trigger: CAATTGCTTGAGCATGCCCAAATATAACATGAAAGT...AGTACCCAACCTGGTAATTATCCTCAAGTTGTGTGCTATTCGTAAGTTCTGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCGCAAGGCAGGTAGACTaGACTTTCATGTTATATTTG +
Preference number: 5 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVARQVD*TFMLYL
Trigger: CAAATATAACATGAAAGTCAAGTCTACCTGCCTTGC...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCACCACCATCGGAGGTATaGAAAATGTCAGTTACTATA +
Preference number: 5 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSPPSEV*KMSVTI
Trigger: TATAGTAACTGACATTTTCAATACCTCCGATGGTGG...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp TTATATTTGGGCATGCTCAAGCAATTGACTGATGTTTGGCAGTGTTGCAAATCAATGATCACAAGGATGTaGCCACCTATTGTCATGATT +
Preference number: 5 (lower is better)
Translates to: LYLGMLKQLTDVWQCCKSMITRM*PPIVMI
Trigger: AATCATGACAATAGGTGGCAACATCCTTGTGATCAT...TGATTTGCAACACTGCCAAACATCAGTCAATTGCTTGAGCATGCCCAAATATAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGTATCTATACTGTGTGTaGAGAACACAGACCAAGGGT +
Preference number: 5 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMYLYCV*RTQTKG
Trigger: ACCCTTGGTCTGTGTTCTCAACACACAGTATAGATA...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp AAAATCCAAATGGAAACTCCGTGTTTCTGTAATCCCGAGTTCGGTAAAAGTGTCAGGATAATTACCAGGTaGGGTACTATTAAGTACTAC +
Preference number: 5 (lower is better)
Translates to: KIQMETPCFCNPEFGKSVRIITR*GTIKYY
Trigger: GTAGTACTTAATAGTACCCAACCTGGTAATTATCCT...GACACTTTTACCGAACTCGGGATTACAGAAACACGGAGTTTCCATTTGGATTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCAATGATCACAAGGATGTaGCCACCTATTGTCATGATT +
Preference number: 5 (lower is better)
Translates to: LLLSAILPYINTNRWIHAMITRM*PPIVMI
Trigger: AATCATGACAATAGGTGGCAACATCCTTGTGATCAT...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ACCAGGTTGGGTACTATTAAGTACTACTACTTGATGACACAAGAATCATTAACATCCTACATATGTAGCTaGTACCGTAGGAAAAGACTG +
Preference number: 5 (lower is better)
Translates to: TRLGTIKYYYLMTQESLTSYICS*YRRKRL
Trigger: CAGTCTTTTCCTACGGTACAAGCTACATATGTAGGA...TGTTAATGATTCTTGTGTCATCAAGTAGTAGTACTTAATAGTACCCAACCTGGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CACAACTTGAGGATAATTACCAGGTTGGGTACTATTAAGTACTACTACTTGATGAAAACCCAATTGATGTaGAATCCTGGGTTGGGAAAT +
Preference number: 5 (lower is better)
Translates to: HNLRIITRLGTIKYYYLMKTQLM*NPGLGN
Trigger: ATTTCCCAACCCAGGATTCAACATCAATTGGGTTTT...CATCAAGTAGTAGTACTTAATAGTACCCAACCTGGTAATTATCCTCAAGTTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp CTTCTTCTATCAGCTATTCTGCCCTACATTAATACAAATCGATGGATTCATGCAACTTTCATGTTATATTaGGGCATGCTCAAGCAATTG +
Preference number: 5 (lower is better)
Translates to: LLLSAILPYINTNRWIHATFMLY*GMLKQL
Trigger: CAATTGCTTGAGCATGCCCAAATATAACATGAAAGT...TGCATGAATCCATCGATTTGTATTAATGTAGGGCAGAATAGCTGATAGAAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS-3UTR CAA 90 bp ATAATTATTTTAACATGCACTTCAACAGACCTAACAGGCAAGGCAGGTAGACTTAGGATAATTACCAGGTaGGGTACTATTAAGTACTAC +
Preference number: 5 (lower is better)
Translates to: IIILTCTSTDLTGKAGRLRIITR*GTIKYY
Trigger: GTAGTACTTAATAGTACCCAACCTGGTAATTATCCT...AAGTCTACCTGCCTTGCCTGTTAGGTCTGTTGAAGTGCATGTTAAAATAATTAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS GCA 72 bp AGCGGAGCCCGCGGCAGTCGGTGCGCTGAGCTGCGCTaGGCTGCGCGCCGCAACCTCGCGCCTCGGCGGAGG +
Preference number: 6 (lower is better)
Translates to: SGARGSRCAELR*AARRNLAPRRR
Trigger: CCTCCGCCGAGGCGCGAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCGCGGGCTCCGCT
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS TCA 72 bp GCAATCGCCCAGCGGAGCCCGCGGCAGTCGGTGCGCTaGGCTGCGCTGCGCTGCGCGCCGCAACCTCGCGCC +
Preference number: 6 (lower is better)
Translates to: AIAQRSPRQSVR*AALRCAPQPRA
Trigger: GGCGCGAGGTTGCGGCGCGCAGCGCAGCGCAGCTCAGCGCACCGACTGCCGCGGGCTCCGCTGGGCGATTGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 72 bp AGGAAATCCAGACTTAGTCCAGGCGGTTCCTCGGTGTaGCCGTGCAGTAACATCAAAGCTTGTCGGCGCAGA +
Preference number: 6 (lower is better)
Translates to: RKSRLSPGGSSV*PCSNIKACRRR
Trigger: TCTGCGCCGACAAGCTTTGATGTTACTGCACGGCCACACCGAGGAACCGCCTGGACTAAGTCTGGATTTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp GCCCCTAGGACGTCTCTCCTTCTTCTTTCTTCGGCGTaGGTTCTGGTCTTGGTTAGGGTTTGCAGAGTTCTC +
Preference number: 6 (lower is better)
Translates to: APRTSLLLLSSA*VLVLVRVCRVL
Trigger: GAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGACGTCCTAGGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp GGTTTGCAGAGTTCTCTTCCTCGGCCGTATTCCTCTTaGAGCACTTCAGGAAATCCAGACTTAGTCCAGGCG +
Preference number: 6 (lower is better)
Translates to: GLQSSLPRPYSS*STSGNPDLVQA
Trigger: CGCCTGGACTAAGTCTGGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp CTTTCTTCGGCGTGCGTTCTGGTCTTGGTTAGGGTTTaGAGAGTTCTCTTCCTCGGCCGTATTCCTCTTGCA +
Preference number: 6 (lower is better)
Translates to: LSSACVLVLVRV*RVLFLGRIPLA
Trigger: TGCAAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 72 bp CTCTCCTTCTTCTTTCTTCGGCGTGCGTTCTGGTCTTaGTTAGGGTTTGCAGAGTTCTCTTCCTCGGCCGTA +
Preference number: 6 (lower is better)
Translates to: LSFFFLRRAFWS*LGFAEFSSSAV
Trigger: TACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 72 bp GGACGTCTCTCCTTCTTCTTTCTTCGGCGTGCGTTCTaGTCTTGGTTAGGGTTTGCAGAGTTCTCTTCCTCG +
Preference number: 6 (lower is better)
Translates to: GRLSFFFLRRAF*SWLGFAEFSSS
Trigger: CGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGACGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 72 bp GGGTTTGCAGAGTTCTCTTCCTCGGCCGTATTCCTCTaGCAGCACTTCAGGAAATCCAGACTTAGTCCAGGC +
Preference number: 6 (lower is better)
Translates to: GFAEFSSSAVFL*QHFRKSRLSPG
Trigger: GCCTGGACTAAGTCTGGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 72 bp TCTCTCCTTCTTCTTTCTTCGGCGTGCGTTCTGGTCTaGGTTAGGGTTTGCAGAGTTCTCTTCCTCGGCCGT +
Preference number: 6 (lower is better)
Translates to: SLLLLSSACVLV*VRVCRVLFLGR
Trigger: ACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 90 bp TCTTGGTTAGGGTTTGCAGAGTTCTCTTCCTCGGCCGTATTCCTCTaGCAGCACTTCAGGAAATCCAGACTTAGTCCAGGCGGTTCCTCG +
Preference number: 6 (lower is better)
Translates to: SWLGFAEFSSSAVFL*QHFRKSRLSPGGSS
Trigger: CGAGGAACCGCCTGGACTAAGTCTGGATTTCCTGAAGTGCTGCAAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 90 bp CCTAGGACGTCTCTCCTTCTTCTTTCTTCGGCGTGCGTTCTGGTCTaGGTTAGGGTTTGCAGAGTTCTCTTCCTCGGCCGTATTCCTCTT +
Preference number: 6 (lower is better)
Translates to: PRTSLLLLSSACVLV*VRVCRVLFLGRIPL
Trigger: AAGAGGAATACGGCCGAGGAAGAGAACTCTGCAAACCCTAACCAAGACCAGAACGCACGCCGAAGAAAGAAGAAGGAGAGACGTCCTAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp GACGACAACGATGTACAGACAGAAGAAGAGTTCATATaGAATCGGCAGGTAAGGGGCAAGGCAGGCCAATGG +
Preference number: 6 (lower is better)
Translates to: DDNDVQTEEEFI*NRQVRGKAGQW
Trigger: CCATTGGCCTGCCTTGCCCCTTACCTGCCGATTGCATATGAACTCTTCTTCTGTCTGTACATCGTTGTCGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 90 bp GACCCAATAAGAACGAAATTTGGGTCGTTGAGCACGCACGTCGTGTaGTTCACGAACACCTTTTCTTCGTCCCTCAGTCCAATCACAGGG +
Preference number: 6 (lower is better)
Translates to: DPIRTKFGSLSTHVV*FTNTFSSSLSPITG
Trigger: CCCTGTGATTGGACTGAGGGACGAAGAAAAGGTGTTCGTGAACAACACGACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATTGGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 72 bp AGAACGAAATTTGGGTCGTTGAGCACGCACGTCGTGTaGTTCACGAACACCTTTTCTTCGTCCCTCAGTCCA +
Preference number: 6 (lower is better)
Translates to: RTKFGSLSTHVV*FTNTFSSSLSP
Trigger: TGGACTGAGGGACGAAGAAAAGGTGTTCGTGAACAACACGACGTGCGTGCTCAACGACCCAAATTTCGTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp TACTCTAGCTTAGTAACTGACCACCTCCAGCATCTCTaGACTAATCGCGTCTTCTTTCTTCTTCGTTGGCCC +
Preference number: 6 (lower is better)
Translates to: YSSLVTDHLQHL*TNRVFFLLRWP
Trigger: GGGCCAACGAAGAAGAAAGAAGACGCGATTAGTGCAGAGATGCTGGAGGTGGTCAGTTACTAAGCTAGAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 72 bp CCGTCTGGGAATTTGAAGCGTCCACCATCGGAGGTATaGAAAATGTCAGTTACTATAGCTGCTACTGGGCTC +
Preference number: 6 (lower is better)
Translates to: PSGNLKRPPSEV*KMSVTIAATGL
Trigger: GAGCCCAGTAGCAGCTATAGTAACTGACATTTTCAATACCTCCGATGGTGGACGCTTCAAATTCCCAGACGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 72 bp GCTACGAAGGACCCAATAAGAACGAAATTTGGGTCGTaGAGCACGCACGTCGTGTTGTTCACGAACACCTTT +
Preference number: 6 (lower is better)
Translates to: ATKDPIRTKFGS*STHVVLFTNTF
Trigger: AAAGGTGTTCGTGAACAACACGACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATTGGGTCCTTCGTAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 90 bp ATGAAGAAAGCTACGAAGGACCCAATAAGAACGAAATTTGGGTCGTaGAGCACGCACGTCGTGTTGTTCACGAACACCTTTTCTTCGTCC +
Preference number: 6 (lower is better)
Translates to: MKKATKDPIRTKFGS*STHVVLFTNTFSSS
Trigger: GGACGAAGAAAAGGTGTTCGTGAACAACACGACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATTGGGTCCTTCGTAGCTTTCTTCAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CCA 72 bp GAAGAAAGCTACGAAGGACCCAATAAGAACGAAATTTaGGTCGTTGAGCACGCACGTCGTGTTGTTCACGAA +
Preference number: 6 (lower is better)
Translates to: EESYEGPNKNEI*VVEHARRVVHE
Trigger: TTCGTGAACAACACGACGTGCGTGCTCAACGACCCAAATTTCGTTCTTATTGGGTCCTTCGTAGCTTTCTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS TCA 72 bp GTTGCCACCTATTGTCATGATTATTATGATGACGATTaGAAGTGCTGGCCAGTTTTGTACCCCGTCTGGGAA +
Preference number: 6 (lower is better)
Translates to: VATYCHDYYDDD*KCWPVLYPVWE
Trigger: TTCCCAGACGGGGTACAAAACTGGCCAGCACTTTCAATCGTCATCATAATAATCATGACAATAGGTGGCAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp TTCATGATGGCCTTAGTCCGCGAATTGAAACGGCTATaGTCAATAGGATTACGTATTGCTACATACCGATCC +
Preference number: 6 (lower is better)
Translates to: FMMALVRELKRL*SIGLRIATYRS
Trigger: GGATCGGTATGTAGCAATACGTAATCCTATTGAGCATAGCCGTTTCAATTCGCGGACTAAGGCCATCATGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS CCA 72 bp GGTTCATCATATCATCCTTTAGTTGTTTTTGAAGGATaGCGTCAGTTGGCCTATGTTATAGATGCTCGCGGG +
Preference number: 6 (lower is better)
Translates to: GSSYHPLVVFEG*RQLAYVIDARG
Trigger: CCCGCGAGCATCTATAACATAGGCCAACTGACGCCATCCTTCAAAAACAACTAAAGGATGATATGATGAACC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371950.3
CDS GCA 72 bp ACTATAGCTGCTACTGGGCTCACAGAAATATCAGATTaGCAAACCAATAGGCCAATTAGGTGCACAAGGAAT +
Preference number: 6 (lower is better)
Translates to: TIAATGLTEISD*QTNRPIRCTRN
Trigger: ATTCCTTGTGCACCTAATTGGCCTATTGGTTTGGCAATCTGATATTTCTGTGAGCCCAGTAGCAGCTATAGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS GCA 72 bp GAACTGATACACCGATCCAGCGATATAGCGCAGAGGTaGATGATGGACGCTGTTGAAAATAAAACATCTAAA +
Preference number: 6 (lower is better)
Translates to: ELIHRSSDIAQR*MMDAVENKTSK
Trigger: TTTAGATGTTTTATTTTCAACAGCGTCCATCATGCACCTCTGCGCTATATCGCTGGATCGGTGTATCAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000371950.3
CDS CAA 90 bp ATTGCCCAAACAATAGCAATCTTCATGATGGCCTTAGTCCGCGAATaGAAACGGCTATGCTCAATAGGATTACGTATTGCTACATACCGA +
Preference number: 6 (lower is better)
Translates to: IAQTIAIFMMALVRE*KRLCSIGLRIATYR
Trigger: TCGGTATGTAGCAATACGTAATCCTATTGAGCATAGCCGTTTCAATTCGCGGACTAAGGCCATCATGAAGATTGCTATTGTTTGGGCAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS GCA 72 bp ATTGCTACATACCGATCCAGCGATATAGCGCAGAGGTaGATGATGGACGCTGTTGAAAATAAAACATCTAAA +
Preference number: 6 (lower is better)
Translates to: IATYRSSDIAQR*MMDAVENKTSK
Trigger: TTTAGATGTTTTATTTTCAACAGCGTCCATCATGCACCTCTGCGCTATATCGCTGGATCGGTATGTAGCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS CAA 72 bp ACAATAGCAATCTTCATGATGGCCTTAGTCCGCGAATaGAAACGGCTATGCTCAATAGGATTACGTATTGCT +
Preference number: 6 (lower is better)
Translates to: TIAIFMMALVRE*KRLCSIGLRIA
Trigger: AGCAATACGTAATCCTATTGAGCATAGCCGTTTCAATTCGCGGACTAAGGCCATCATGAAGATTGCTATTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000276198.6
ENST00000371951.5
CDS CAA 90 bp TTGTGCAGTTTCTTTTCCATGCTTACTGCCATGATCACAAGGATGTaGCCACCTATTGTCATGATTATTATGATGACGATTGAAAGTGCT +
Preference number: 6 (lower is better)
Translates to: LCSFFSMLTAMITRM*PPIVMIIMMTIESA
Trigger: AGCACTTTCAATCGTCATCATAATAATCATGACAATAGGTGGCAACATCCTTGTGATCATGGCAGTAAGCATGGAAAAGAAACTGCACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5
CDS CAA 72 bp TTCTTTTCCATGCTTACTGCCATGATCACAAGGATGTaGCCACCTATTGTCATGATTATTATGATGACGATT +
Preference number: 6 (lower is better)
Translates to: FFSMLTAMITRM*PPIVMIIMMTI
Trigger: AATCGTCATCATAATAATCATGACAATAGGTGGCAACATCCTTGTGATCATGGCAGTAAGCATGGAAAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000276198.6
ENST00000371950.3
ENST00000371951.5