Pregenerated sensors for HTR2B (Homo sapiens)
Ensembl gene IDs: ENSG00000135914Ensembl transcript IDs: ENST00000258400.4
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | TGGGAGGGGCCACATAGCCTCAAACATTATTGTCAAGAGGGCAATTaGCATCACAAACAATCCAACCAGCAAATCAGCCACCGCCAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: WEGPHSLKHYCQEGN*HHKQSNQQISHRQG Trigger: TCCTTGGCGGTGGCTGATTTGCTGGTTGGATTGTTTGTGATGCCAATTGCCCTCTTGACAATAATGTTTGAGGCTATGTGGCCCCTCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 90 bp | AGCCTTGTCCTTTCGAGAACCATCCAGCATTGCCACCTTTTCCGGTaGCGAGCAAGGTGTTTCATCCCTTTGGAAAACTGTAGACACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLVLSRTIQHCHLFR*RARCFIPLENCRHS Trigger: ACTGTGTCTACAGTTTTCCAAAGGGATGAAACACCTTGCTCGTCACCGGAAAAGGTGGCAATGCTGGATGGTTCTCGAAAGGACAAGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 90 bp | CTTGCATGCCAGAGAGTTCCCCCTCTGGTTTCGTTGTTATTTTGCTaGGCATGTCATCTTATCTGTTCACTAGACTTGCTTGCTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LACQRVPPLVSLLFC*ACHLICSLDLLAAV Trigger: CACAGCAGCAAGCAAGTCTAGTGAACAGATAAGATGACATGCTCAGCAAAATAACAACGAAACCAGAGGGGGAACTCTCTGGCATGCAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 90 bp | CTTTTTCCCAATTGTGGATGTTCTTCGCATAAGTGTTTCATCACCTaGGTTGGGCAGAGCCTTGTCCTTTCGAGAACCATCCAGCATTGC | + |
|
Preference number: 5 (lower is better) Translates to: LFPNCGCSSHKCFIT*VGQSLVLSRTIQHC Trigger: GCAATGCTGGATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTGATGAAACACTTATGCGAAGAACATCCACAATTGGGAAAAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 90 bp | ATTCCGGAAGTAGATCTTACTGGAGCGTTTTCTGAGAGTTTTTACTaGCTTTGTGGCCCGGTAATTGCAGGTGATATATCGGCCAAATGC | + |
|
Preference number: 5 (lower is better) Translates to: IPEVDLTGAFSESFY*LCGPVIAGDISAKC Trigger: GCATTTGGCCGATATATCACCTGCAATTACCGGGCCACAAAGTCAGTAAAAACTCTCAGAAAACGCTCCAGTAAGATCTACTTCCGGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 90 bp | ACAATCCCTAGGACCTTTGAGGCTCTCTGTTCGTTGGAAATGGTCTaGACTGACTTTTTCCCAATTGTGGATGTTCTTCGCATAAGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: TIPRTFEALCSLEMV*TDFFPIVDVLRISV Trigger: AACACTTATGCGAAGAACATCCACAATTGGGAAAAAGTCAGTGCAGACCATTTCCAACGAACAGAGAGCCTCAAAGGTCCTAGGGATTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 90 bp | AGAGGAAAAACACAATCCCTAGGACCTTTGAGGCTCTCTGTTCGTTaGAAATGGTCTGCACTGACTTTTTCCCAATTGTGGATGTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGKTQSLGPLRLSVR*KWSALTFSQLWMFF Trigger: GAAGAACATCCACAATTGGGAAAAAGTCAGTGCAGACCATTTCCAACGAACAGAGAGCCTCAAAGGTCCTAGGGATTGTGTTTTTCCTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 90 bp | CCGAAATGTCTTATTGAAGAGGGTGTAGACCAAAGGATTCACTCCTaGGGAAACATAGCCTATCCACACAAATATCTCCAGGAGCATTTG | + |
|
Preference number: 5 (lower is better) Translates to: PKCLIEEGVDQRIHS*GNIAYPHKYLQEHL Trigger: CAAATGCTCCTGGAGATATTTGTGTGGATAGGCTATGTTTCCTCAGGAGTGAATCCTTTGGTCTACACCCTCTTCAATAAGACATTTCGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 90 bp | TTTTCAGTGAGGAGAAGCGTATCTAGTAGAATGATTGATGAAGACTaGATGGTTGAACTTCGGAGCCTCATTGGACTCTGGTACATGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FSVRRSVSSRMIDED*MVELRSLIGLWYMA Trigger: TGCCATGTACCAGAGTCCAATGAGGCTCCGAAGTTCAACCATTCAGTCTTCATCAATCATTCTACTAGATACGCTTCTCCTCACTGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 90 bp | CCAATTGTGGGTATTATCACCATGAGTATCAGAAGAGCTGCCCAGTaGAGTTTATTTCCCTGTTCCTCAACAATCTGTTTCATTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PIVGIITMSIRRAAQ*SLFPCSSTICFISS Trigger: AGAGGAAATGAAACAGATTGTTGAGGAACAGGGAAATAAACTGCACTGGGCAGCTCTTCTGATACTCATGGTGATAATACCCACAATTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 90 bp | GAAATCGCCAAAACGTTCCTTTGTCAGCACACAAGTGATATTGTTTaGGTTGTCCACATCAGTCTCTATCCCTTTAATAGGGACTGGAAT | + |
|
Preference number: 5 (lower is better) Translates to: EIAKTFLCQHTSDIV*VVHISLYPFNRDWN Trigger: ATTCCAGTCCCTATTAAAGGGATAGAGACTGATGTGGACAACCCAAACAATATCACTTGTGTGCTGACAAAGGAACGTTTTGGCGATTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 90 bp | ATTTCCACCAATTGTGGGTATTATCACCATGAGTATCAGAAGAGCTaGCCAGTGCAGTTTATTTCCCTGTTCCTCAACAATCTGTTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: ISTNCGYYHHEYQKS*PVQFISLFLNNLFH Trigger: ATGAAACAGATTGTTGAGGAACAGGGAAATAAACTGCACTGGGCAGCTCTTCTGATACTCATGGTGATAATACCCACAATTGGTGGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 90 bp | AATCCCATTTCGAATTCCATGTTTCTTGAAAAACTTAGAGTTCTCTaGCATTGGATTCCGGAAGTAGATCTTACTGGAGCGTTTTCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: NPISNSMFLEKLRVL*HWIPEVDLTGAFSE Trigger: CTCAGAAAACGCTCCAGTAAGATCTACTTCCGGAATCCAATGGCAGAGAACTCTAAGTTTTTCAAGAAACATGGAATTCGAAATGGGATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 90 bp | ATTTCGAATTCCATGTTTCTTGAAAAACTTAGAGTTCTCTGCCATTaGATTCCGGAAGTAGATCTTACTGGAGCGTTTTCTGAGAGTTTT | + |
|
Preference number: 5 (lower is better) Translates to: ISNSMFLEKLRVLCH*IPEVDLTGAFSESF Trigger: AAAACTCTCAGAAAACGCTCCAGTAAGATCTACTTCCGGAATCCAATGGCAGAGAACTCTAAGTTTTTCAAGAAACATGGAATTCGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 90 bp | CACCTGAGTTGGGCAGAGCCTTGTCCTTTCGAGAACCATCCAGCATaGCCACCTTTTCCGGTGACGAGCAAGGTGTTTCATCCCTTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: HLSWAEPCPFENHPA*PPFPVTSKVFHPFG Trigger: TCCAAAGGGATGAAACACCTTGCTCGTCACCGGAAAAGGTGGCAATGCTGGATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 90 bp | GATGTTCTTCGCATAAGTGTTTCATCACCTGAGTTGGGCAGAGCCTaGTCCTTTCGAGAACCATCCAGCATTGCCACCTTTTCCGGTGAC | + |
|
Preference number: 6 (lower is better) Translates to: DVLRISVSSPELGRA*SFREPSSIATFSGD Trigger: GTCACCGGAAAAGGTGGCAATGCTGGATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTGATGAAACACTTATGCGAAGAACATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | CGCATAAGTGTTTCATCACCTGAGTTGGGCAGAGCCTaGTCCTTTCGAGAACCATCCAGCATTGCCACCTTT | + |
|
Preference number: 6 (lower is better) Translates to: RISVSSPELGRA*SFREPSSIATF Trigger: AAAGGTGGCAATGCTGGATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTGATGAAACACTTATGCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | GTGGATGTTCTTCGCATAAGTGTTTCATCACCTGAGTaGGGCAGAGCCTTGTCCTTTCGAGAACCATCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VDVLRISVSSPE*GRALSFREPSS Trigger: GCTGGATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTGATGAAACACTTATGCGAAGAACATCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 90 bp | TTCCCAATTGTGGATGTTCTTCGCATAAGTGTTTCATCACCTGAGTaGGGCAGAGCCTTGTCCTTTCGAGAACCATCCAGCATTGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: FPIVDVLRISVSSPE*GRALSFREPSSIAT Trigger: GGTGGCAATGCTGGATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTGATGAAACACTTATGCGAAGAACATCCACAATTGGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | CTTTCGAGAACCATCCAGCATTGCCACCTTTTCCGGTaGCGAGCAAGGTGTTTCATCCCTTTGGAAAACTGT | + |
|
Preference number: 6 (lower is better) Translates to: LSRTIQHCHLFR*RARCFIPLENC Trigger: ACAGTTTTCCAAAGGGATGAAACACCTTGCTCGTCACCGGAAAAGGTGGCAATGCTGGATGGTTCTCGAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 72 bp | TGTGGCCCGGTAATTGCAGGTGATATATCGGCCAAATaGATCCCGAAATGTCTTATTGAAGAGGGTGTAGAC | + |
|
Preference number: 6 (lower is better) Translates to: CGPVIAGDISAK*IPKCLIEEGVD Trigger: GTCTACACCCTCTTCAATAAGACATTTCGGGATGCATTTGGCCGATATATCACCTGCAATTACCGGGCCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 72 bp | TCCCTAGGACCTTTGAGGCTCTCTGTTCGTTGGAAATaGTCTGCACTGACTTTTTCCCAATTGTGGATGTTC | + |
|
Preference number: 6 (lower is better) Translates to: SLGPLRLSVRWK*SALTFSQLWMF Trigger: GAACATCCACAATTGGGAAAAAGTCAGTGCAGACCATTTCCAACGAACAGAGAGCCTCAAAGGTCCTAGGGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 72 bp | ACACAATCCCTAGGACCTTTGAGGCTCTCTGTTCGTTaGAAATGGTCTGCACTGACTTTTTCCCAATTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: TQSLGPLRLSVR*KWSALTFSQLW Trigger: CCACAATTGGGAAAAAGTCAGTGCAGACCATTTCCAACGAACAGAGAGCCTCAAAGGTCCTAGGGATTGTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | TCTCTCTCTTTTTCTGCCGTAGTTGTAGAGTCGTGTTaGAACTTGCATGCCAGAGAGTTCCCCCTCTGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SLSFSAVVVESC*NLHAREFPLWF Trigger: AAACCAGAGGGGGAACTCTCTGGCATGCAAGTTCAAACACGACTCTACAACTACGGCAGAAAAAGAGAGAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | ACACTCTGTAAGAGAGAGCCATTTGCTGTTTTTCTGTaGTTCAATCCCGTTCCGAACAGTGGTCAGCATGGT | + |
|
Preference number: 6 (lower is better) Translates to: TLCKREPFAVFL*FNPVPNSGQHG Trigger: ACCATGCTGACCACTGTTCGGAACGGGATTGAATCACAGAAAAACAGCAAATGGCTCTCTCTTACAGAGTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | AATTGTGGATGTTCTTCGCATAAGTGTTTCATCACCTaGGTTGGGCAGAGCCTTGTCCTTTCGAGAACCATC | + |
|
Preference number: 6 (lower is better) Translates to: NCGCSSHKCFIT*VGQSLVLSRTI Trigger: GATGGTTCTCGAAAGGACAAGGCTCTGCCCAACTCAGGTGATGAAACACTTATGCGAAGAACATCCACAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 72 bp | TTCTGCCGTAGTTGTAGAGTCGTGTTTGAACTTGCATaGCAGAGAGTTCCCCCTCTGGTTTCGTTGTTATTT | + |
|
Preference number: 6 (lower is better) Translates to: FCRSCRVVFELA*QRVPPLVSLLF Trigger: AAATAACAACGAAACCAGAGGGGGAACTCTCTGGCATGCAAGTTCAAACACGACTCTACAACTACGGCAGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 72 bp | TGCTGTTTTTCTGTGATTCAATCCCGTTCCGAACAGTaGTCAGCATGGTTAGTAGCTAAGCTGCTCATCTGT | + |
|
Preference number: 6 (lower is better) Translates to: CCFSVIQSRSEQ*SAWLVAKLLIC Trigger: ACAGATGAGCAGCTTAGCTACTAACCATGCTGACCACTGTTCGGAACGGGATTGAATCACAGAAAAACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | AACACAATCCCTAGGACCTTTGAGGCTCTCTGTTCGTaGGAAATGGTCTGCACTGACTTTTTCCCAATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: NTIPRTFEALCS*EMVCTDFFPIV Trigger: CACAATTGGGAAAAAGTCAGTGCAGACCATTTCCAACGAACAGAGAGCCTCAAAGGTCCTAGGGATTGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 90 bp | AGGAATTGTGCTTTGAAGTTCAGACACTCTGTAAGAGAGAGCCATTaGCTGTTTTTCTGTGATTCAATCCCGTTCCGAACAGTGGTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RNCALKFRHSVRESH*LFFCDSIPFRTVVS Trigger: GCTGACCACTGTTCGGAACGGGATTGAATCACAGAAAAACAGCAAATGGCTCTCTCTTACAGAGTGTCTGAACTTCAAAGCACAATTCCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 90 bp | TCGCCAAAACGTTCCTTTGTCAGCACACAAGTGATATTGTTTGGGTaGTCCACATCAGTCTCTATCCCTTTAATAGGGACTGGAATGGCA | + |
|
Preference number: 6 (lower is better) Translates to: SPKRSFVSTQVILFG*STSVSIPLIGTGMA Trigger: TGCCATTCCAGTCCCTATTAAAGGGATAGAGACTGATGTGGACAACCCAAACAATATCACTTGTGTGCTGACAAAGGAACGTTTTGGCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | CCCGTGAGTTATATTGATTGGCCTGGATTGGCTTTTTaGTGGCTATGTAACGATCCACTGAAATGGCACAGA | + |
|
Preference number: 6 (lower is better) Translates to: PVSYIDWPGLAF*WLCNDPLKWHR Trigger: TCTGTGCCATTTCAGTGGATCGTTACATAGCCATCAAAAAGCCAATCCAGGCCAATCAATATAACTCACGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | AGGAGAAGCGTATCTAGTAGAATGATTGATGAAGACTaGATGGTTGAACTTCGGAGCCTCATTGGACTCTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSVSSRMIDED*MVELRSLIGLW Trigger: CCAGAGTCCAATGAGGCTCCGAAGTTCAACCATTCAGTCTTCATCAATCATTCTACTAGATACGCTTCTCCT 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 72 bp | GAACAAAGGTGCTCTGCAAAATGTGCTCAGGAATTGTaGTTTGAAGTTCAGACACTCTGTAAGAGAGAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: EQRCSAKCAQEL*FEVQTLCKREP Trigger: TGGCTCTCTCTTACAGAGTGTCTGAACTTCAAAGCACAATTCCTGAGCACATTTTGCAGAGCACCTTTGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 72 bp | CCACATAGCCTCAAACATTATTGTCAAGAGGGCAATTaGCATCACAAACAATCCAACCAGCAAATCAGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PHSLKHYCQEGN*HHKQSNQQISH Trigger: GTGGCTGATTTGCTGGTTGGATTGTTTGTGATGCCAATTGCCCTCTTGACAATAATGTTTGAGGCTATGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 90 bp | AAGAGGAAAAACACAATCCCTAGGACCTTTGAGGCTCTCTGTTCGTaGGAAATGGTCTGCACTGACTTTTTCCCAATTGTGGATGTTCTT | + |
|
Preference number: 6 (lower is better) Translates to: KRKNTIPRTFEALCS*EMVCTDFFPIVDVL Trigger: AAGAACATCCACAATTGGGAAAAAGTCAGTGCAGACCATTTCCAACGAACAGAGAGCCTCAAAGGTCCTAGGGATTGTGTTTTTCCTCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | CAAGGGTATTTCCACCAATTGTGGGTATTATCACCATaGGTATCAGAAGAGCTGCCCAGTGCAGTTTATTTC | + |
|
Preference number: 6 (lower is better) Translates to: QGYFHQLWVLSP*VSEELPSAVYF Trigger: GAAATAAACTGCACTGGGCAGCTCTTCTGATACTCATGGTGATAATACCCACAATTGGTGGAAATACCCTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | CCACACCACTGTAATCTTGATGAATGCTGTAGCCCGTaGGTTATATTGATTGGCCTGGATTGGCTTTTTGAT | + |
|
Preference number: 6 (lower is better) Translates to: PHHCNLDECCSP*VILIGLDWLFD Trigger: ATCAAAAAGCCAATCCAGGCCAATCAATATAACTCACGGGCTACAGCATTCATCAAGATTACAGTGGTGTGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | CTTATTGAAGAGGGTGTAGACCAAAGGATTCACTCCTaGGGAAACATAGCCTATCCACACAAATATCTCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LIEEGVDQRIHS*GNIAYPHKYLQ Trigger: CTGGAGATATTTGTGTGGATAGGCTATGTTTCCTCAGGAGTGAATCCTTTGGTCTACACCCTCTTCAATAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | GAGTTTTTACTGACTTTGTGGCCCGGTAATTGCAGGTaGTATATCGGCCAAATGCATCCCGAAATGTCTTAT | + |
|
Preference number: 6 (lower is better) Translates to: EFLLTLWPGNCR*YIGQMHPEMSY Trigger: ATAAGACATTTCGGGATGCATTTGGCCGATATATCACCTGCAATTACCGGGCCACAAAGTCAGTAAAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | GTAGATCTTACTGGAGCGTTTTCTGAGAGTTTTTACTaGCTTTGTGGCCCGGTAATTGCAGGTGATATATCG | + |
|
Preference number: 6 (lower is better) Translates to: VDLTGAFSESFY*LCGPVIAGDIS Trigger: CGATATATCACCTGCAATTACCGGGCCACAAAGTCAGTAAAAACTCTCAGAAAACGCTCCAGTAAGATCTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 72 bp | GGTATTATCACCATGAGTATCAGAAGAGCTGCCCAGTaGAGTTTATTTCCCTGTTCCTCAACAATCTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: GIITMSIRRAAQ*SLFPCSSTICF Trigger: GAAACAGATTGTTGAGGAACAGGGAAATAAACTGCACTGGGCAGCTCTTCTGATACTCATGGTGATAATACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | ATGCCAGAGAGTTCCCCCTCTGGTTTCGTTGTTATTTaGCTGAGCATGTCATCTTATCTGTTCACTAGACTT | + |
|
Preference number: 6 (lower is better) Translates to: MPESSPSGFVVI*LSMSSYLFTRL Trigger: AAGTCTAGTGAACAGATAAGATGACATGCTCAGCAAAATAACAACGAAACCAGAGGGGGAACTCTCTGGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | CGTTCCTTTGTCAGCACACAAGTGATATTGTTTGGGTaGTCCACATCAGTCTCTATCCCTTTAATAGGGACT | + |
|
Preference number: 6 (lower is better) Translates to: RSFVSTQVILFG*STSVSIPLIGT Trigger: AGTCCCTATTAAAGGGATAGAGACTGATGTGGACAACCCAAACAATATCACTTGTGTGCTGACAAAGGAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CAA 72 bp | TCGCCAAAACGTTCCTTTGTCAGCACACAAGTGATATaGTTTGGGTTGTCCACATCAGTCTCTATCCCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SPKRSFVSTQVI*FGLSTSVSIPL Trigger: TAAAGGGATAGAGACTGATGTGGACAACCCAAACAATATCACTTGTGTGCTGACAAAGGAACGTTTTGGCGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | TCTGTCTGTAATCCAGACCAGTTAGAAGAGATAACGTaGACAAAGGTGCTCTGCAAAATGTGCTCAGGAATT | + |
|
Preference number: 6 (lower is better) Translates to: SVCNPDQLEEIT*TKVLCKMCSGI Trigger: AATTCCTGAGCACATTTTGCAGAGCACCTTTGTTCACGTTATCTCTTCTAACTGGTCTGGATTACAGACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS TCA 72 bp | CTATGTAACGATCCACTGAAATGGCACAGAGATGCATaGTGGATGCGGTTGAAAAGAGAACGTCAAGAAATA | + |
|
Preference number: 6 (lower is better) Translates to: LCNDPLKWHRDA*WMRLKRERQEI Trigger: TATTTCTTGACGTTCTCTTTTCAACCGCATCCATCATGCATCTCTGTGCCATTTCAGTGGATCGTTACATAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 72 bp | AATTGTGGGTATTATCACCATGAGTATCAGAAGAGCTaGCCAGTGCAGTTTATTTCCCTGTTCCTCAACAAT | + |
|
Preference number: 6 (lower is better) Translates to: NCGYYHHEYQKS*PVQFISLFLNN Trigger: ATTGTTGAGGAACAGGGAAATAAACTGCACTGGGCAGCTCTTCTGATACTCATGGTGATAATACCCACAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS GCA 72 bp | TCGAATTCCATGTTTCTTGAAAAACTTAGAGTTCTCTaGCATTGGATTCCGGAAGTAGATCTTACTGGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: SNSMFLEKLRVL*HWIPEVDLTGA Trigger: CGCTCCAGTAAGATCTACTTCCGGAATCCAATGGCAGAGAACTCTAAGTTTTTCAAGAAACATGGAATTCGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||
| CDS CCA 72 bp | TCCATGTTTCTTGAAAAACTTAGAGTTCTCTGCCATTaGATTCCGGAAGTAGATCTTACTGGAGCGTTTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SMFLEKLRVLCH*IPEVDLTGAFS Trigger: AGAAAACGCTCCAGTAAGATCTACTTCCGGAATCCAATGGCAGAGAACTCTAAGTTTTTCAAGAAACATGGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000258400.4 |
||