Pregenerated sensors for HTR1E (Homo sapiens)
Ensembl gene IDs: ENSG00000168830Ensembl transcript IDs: ENST00000305344.7
Found 81 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTaGACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCC | + |
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Preference number: 1 (lower is better) Translates to: TNKQGNKTTHTYKLS*TKYVQELISCTPYP Trigger: GGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| 3UTR-3UTR CCA 90 bp | GTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAACCACTCATGAGGCTCTaGAAAAAGTCGTGCCTTTTA | + |
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Preference number: 2 (lower is better) Translates to: VSQIRPEVENSTPNNNPQPLMRL*KKSCLL Trigger: TAAAAGGCACGACTTTTTCCAGAGCCTCATGAGTGG...TTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| 3UTR TCA 72 bp | CAAGGAAACAAGACCACACATACTTACAAACTCTCCTaGACCAAGTATGTTCAAGAATTAATAAGTTGCACC | + |
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Preference number: 3 (lower is better) Translates to: QGNKTTHTYKLS*TKYVQELISCT Trigger: GGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | CTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTGCTGGTGGCAGGCGCTaGGCTTCGCCGAGTCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: LNQVCSRINKLHPLPPSTAGGRR*ASPSLG Trigger: GCCCAGACTCGGCGAAGCGCAGCGCCTGCCACCAGC...AGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | CAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGCAGTGCCCGCCGGGGTaGGGCGAGACAGAACCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QVCSRINKLHPLPPSTHEQCPPG*GETEPG Trigger: CCCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTG...CTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | TCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAACACCGAGGCACCGCTGGTaGCAGGCGCTGCGCTTCGCC | + |
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Preference number: 4 (lower is better) Translates to: SQIRPEVENSTPNNNPQTPRHRW*QALRFA Trigger: GGCGAAGCGCAGCGCCTGCCACCAGCGGTGCCTCGG...TGTTTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | AACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCCTTGTGGACGGTGCGTaGAGCCGCGCCGCACTGGGC | + |
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Preference number: 4 (lower is better) Translates to: NKETRPHILTNSPEPSMFLVDGA*SRAALG Trigger: GCCCAGTGCGGCGCGGCTGCACGCACCGTCCACAAG...GAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | TATGTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTGCAGCCGCGCCGCACTaGGCAAACCGGCACGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: YVSQIRPEVENSTPNNNPAAAPH*ANRHVQ Trigger: CTGGACGTGCCGGTTTGCCCAGTGCGGCGCGGCTGC...AGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATACATA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | GTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGGCTTGCTGGATGGTGCACTaGCTAGGGGGAGGGCTTAGG | + |
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Preference number: 4 (lower is better) Translates to: VCSRINKLHPLPPSTHEACWMVH*LGGGLR Trigger: CCTAAGCCCTCCCCCTAGTCAGTGCACCATCCAGCA...AGCCTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | GTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAGTTCCTTGTGGACGGTaGGTGCAGCCGCGCCGCACT | + |
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Preference number: 4 (lower is better) Translates to: VSQIRPEVENSTPNNNPQVPCGR*VQPRRT Trigger: AGTGCGGCGCGGCTGCACGCACCGTCCACAAGGAAC...TTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | CAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGCAGCCCCAGGATGCGTaGTGCCTTCCGTTCCCTGGT | + |
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Preference number: 4 (lower is better) Translates to: QVCSRINKLHPLPPSTHEQPQDA*CLPFPG Trigger: ACCAGGGAACGGAAGGCAGCACGCATCCTGGGGCTG...CTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | TACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCAGCCCGAGGCACCGCTaGTGGCAGGCGCTGCGCTTC | + |
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Preference number: 4 (lower is better) Translates to: YLQTLLNQVCSRINKLHPSPRHR*WQALRF Trigger: GAAGCGCAGCGCCTGCCACCAGCGGTGCCTCGGGCT...GGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | CTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTACCGGCACGTCCAGCTaGCTCCAGAAGTCTCACTCG | + |
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Preference number: 4 (lower is better) Translates to: LNQVCSRINKLHPLPPSTTGTSS*LQKSHS Trigger: CGAGTGAGACTTCTGGAGCCAGCTGGACGTGCCGGT...AGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | ACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCAAGTGAAGGTTCCTTGTaGACGGTGCGTGCAGCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TLLNQVCSRINKLHPLPPSEGSL*TVRAAA Trigger: CGCGGCTGCACGCACCGTCCACAAGGAACCTTCACT...TGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | CAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCGATTCTGGAGTACGTTaGGCCCAGGGCGTTCTCCCC | + |
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Preference number: 4 (lower is better) Translates to: QTLLNQVCSRINKLHPLPDSGVR*AQGVLP Trigger: GGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATC...GGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | ATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAACAAAACAGGGGCATGACGAGCACTaGCACCAGGAGGTCCGTCAC | + |
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Preference number: 4 (lower is better) Translates to: IRPEVENSTPNNNPQTKQGHDEH*HQEVRH Trigger: GTGACGGACCTCCTGGTGGCAGTGCTCGTCATGCCC...CTGTTTTGTTTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGCCCCAGGATGCGTGCTaGCTTCCGTTCCCTGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: TNKETRPHILTNSPEPSMPQDAC*LPFPGA Trigger: AGCACCAGGGAACGGAAGGCAGCACGCATCCTGGGG...CATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | GAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATGGGCTTAGGCGGCGGTaGCTTCTCCAGAACAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: ETRPHILTNSPEPSMFKNGLRRR*LLQNRG Trigger: CCCTCTGTTCTGGAGAAGCCACCGCCGCCTAAGCCC...ATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | ACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGCGCTCCTTTTTCTCCTaGGCTGGATCAGAGCACTGC | + |
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Preference number: 4 (lower is better) Translates to: TNKETRPHILTNSPEPSMRSFFS*AGSEHC Trigger: GCAGTGCTCTGATCCAGCTCAGGAGAAAAAGGAGCG...CATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | CTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTGCAGCCAGGATAAAATaGATGCACCCAGAATCAGCC | + |
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Preference number: 4 (lower is better) Translates to: LNQVCSRINKLHPLPPSTAARIK*MHPESA Trigger: GGCTGATTCTGGGTGCATTCATTTTATCCTGGCTGC...AGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | GTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAACCCCCATCCACTCATaGGGCTCTGGAAAAAGTCGT | + |
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Preference number: 4 (lower is better) Translates to: VSQIRPEVENSTPNNNPQTPIHS*GSGKSR Trigger: ACGACTTTTTCCAGAGCCTCATGAGTGGATGGGGGT...TTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | TACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCGGAGGATGGAGCAGGTaGAGCAGGTCATGTCCACAC | + |
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Preference number: 4 (lower is better) Translates to: YLQTLLNQVCSRINKLHPGGWSR*SRSCPH Trigger: GTGTGGACATGACCTGCTGCACCTGCTCCATCCTCC...GGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | AATTATGTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATGAATCAGCCCCAGGATaGGTGCTGCCTTCCGTTCCC | + |
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Preference number: 4 (lower is better) Translates to: NYVSQIRPEVENSTPNNNESAPG*VLPSVP Trigger: GGGAACGGAAGGCAGCACGCATCCTGGGGCTGATTC...ATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATACATAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| 3UTR CAA 72 bp | ACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTaGCACCCCTTACCCCCATCCACTCATGAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TLLNQVCSRINK*HPLPPSTHEAL Trigger: CAGAGCCTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | CAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGCCACAGCATTTCTTCTaGGTGAAGGTTCCTTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: QVCSRINKLHPLPPSTHEPQHFF*VKVPCG Trigger: TCCACAAGGAACCTTCACTCAGAAGAAATGCTGTGG...CTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | GAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATCTCTGTGGTAGGGTCTaGGGTGGAGAAGTCAGACAC | + |
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Preference number: 4 (lower is better) Translates to: ETRPHILTNSPEPSMFKNLCGRV*GGEVRH Trigger: GTGTCTGACTTCTCCACCTCAGACCCTACCACAGAG...ATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | GTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGGCTCTTCTGTTGCTTAAGTaGCGACTTGATCCCCTTTTC | + |
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Preference number: 4 (lower is better) Translates to: VCSRINKLHPLPPSTHEALLLLK*RLDPLF Trigger: GAAAAGGGGATCAAGTCGGCACTTAAGCAACAGAAG...AGCCTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTCTGGTAAAGGCTCTTaGCCGCGTGGTAAATCCGGT | + |
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Preference number: 4 (lower is better) Translates to: TNKETRPHILTNSPEPSMSGKGS*PRGKSG Trigger: ACCGGATTTACCACGCGGCCAAGAGCCTTTACCAGA...CATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | ACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCAGCTGGATCAGAGCACTaGTTCTCTCAACATTCGATT | + |
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Preference number: 4 (lower is better) Translates to: TLLNQVCSRINKLHPLPPAGSEH*FSQHSI Trigger: AATCGAATGTTGAGAGAAGCAGTGCTCTGATCCAGC...TGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | GTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAAGGACACGGTGTAGATaGTCAGACCCACAATCAACT | + |
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Preference number: 4 (lower is better) Translates to: VSQIRPEVENSTPNNNPQRTRCR*SDPQST Trigger: AGTTGATTGTGGGTCTGAGCATCTACACCGTGTCCT...TTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | GAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATCTCAACATTCGATTCTaGAGTACGTTGAGCCCAGGG | + |
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Preference number: 4 (lower is better) Translates to: ETRPHILTNSPEPSMFKNLNIRF*STLSPG Trigger: CCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAG...ATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | CAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCACTCATGAGGCTCTaGAAAAAGTCGTGCCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: QTLLNQVCSRINKLHPLPPLMRL*KKSCLL Trigger: TAAAAGGCACGACTTTTTCCAGAGCCTCATGAGTGG...GGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | TACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCAGCATTTCTTCTGAGTaGAGGTTCCTTGTGGACGGT | + |
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Preference number: 4 (lower is better) Translates to: YLQTLLNQVCSRINKLHPSISSE*RFLVDG Trigger: ACCGTCCACAAGGAACCTTCACTCAGAAGAAATGCT...GGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | GTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAAATTCTGGCTATCTGTaGTTCTGTTGCTTAAGTGCC | + |
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Preference number: 4 (lower is better) Translates to: VSQIRPEVENSTPNNNPQNSGYL*FCCLSA Trigger: GGCACTTAAGCAACAGAAGCACAGATAGCCAGAATT...TTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | ACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTATCTGTGCTTCTGTTaGTTAAGTGCCGACTTGATC | + |
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Preference number: 4 (lower is better) Translates to: TNKETRPHILTNSPEPSMYLCFC*LSADLI Trigger: GATCAAGTCGGCACTTAAGCAACAGAAGCACAGATA...CATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | ACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGATCCTGATGGAGGCATaGAACTTTTCAAACTCTGTG | + |
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Preference number: 4 (lower is better) Translates to: TNKETRPHILTNSPEPSMILMEA*NFSNSV Trigger: CACAGAGTTTGAAAAGTTCCATGCCTCCATCAGGAT...CATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | AACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCTATAGAGCAGAGGGTTaGTCAGAGAATTCACATAAC | + |
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Preference number: 4 (lower is better) Translates to: NKETRPHILTNSPEPSMFYRAEG*SENSHN Trigger: GTTATGTGAATTCTCTGATCAACCCTCTGCTCTATA...GAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR GCA 90 bp | GAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATCAAGAATTAATAAGTTaGACCCCTTACCCCCATCCA | + |
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Preference number: 4 (lower is better) Translates to: ETRPHILTNSPEPSMFKNQELIS*TPYPHP Trigger: TGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTG...ATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | TATGTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCTTGCAAAAGAATTCTaGCTATCTGTGCTTCTGTTG | + |
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Preference number: 4 (lower is better) Translates to: YVSQIRPEVENSTPNNNPLAKEF*LSVLLL Trigger: CAACAGAAGCACAGATAGCCAGAATTCTTTTGCAAG...AGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATACATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | AATTATGTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCTGTGGTACAGTTTGTaGTGTTCATGTTTCCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NYVSQIRPEVENSTPNNNLWYSL*CSCFPC Trigger: ACAAGGGAAACATGAACATCACAAACTGTACCACAG...ATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATACATAATT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | CAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCATTTGTTCAGCTATGTaGTCTCTTGTGTTCCATTTT | + |
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Preference number: 4 (lower is better) Translates to: QTLLNQVCSRINKLHPLPICSAM*SLVFHF Trigger: AAAATGGAACACAAGAGACCACATAGCTGAACAAAT...GGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CCA 90 bp | TATGTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTTTTCAGTCTACACTGTaGAGAAGCTGTTGGTTATTT | + |
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Preference number: 4 (lower is better) Translates to: YVSQIRPEVENSTPNNNPFQSTL*RSCWLF Trigger: AAATAACCAACAGCTTCTCCACAGTGTAGACTGAAA...AGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATACATA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR TCA 90 bp | TACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCACTTACAAACTCTCCTaGACCAAGTATGTTCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: YLQTLLNQVCSRINKLHPTYKLS*TKYVQE Trigger: TTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGT...GGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS GCA 90 bp | CGTTCTCCCCGCCAGCGTCCTTGCCCGCGCCAGTGCCCGCCGGGGTaGGGCGAGACAGAACCTGGGAGCGCGGCGCGCCGGGCAGCCCGA | + |
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Preference number: 5 (lower is better) Translates to: RSPRQRPCPRQCPPG*GETEPGSAARRAAR Trigger: TCGGGCTGCCCGGCGCGCCGCGCTCCCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 90 bp | TCCTTGCCCGCGCCAGTGCCCGCCGGGGTGCGGCGAGACAGAACCTaGGAGCGCGGCGCGCCGGGCAGCCCGAGGCACCGCTGGTGGCAG | + |
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Preference number: 5 (lower is better) Translates to: SLPAPVPAGVRRDRT*ERGAPGSPRHRWWQ Trigger: CTGCCACCAGCGGTGCCTCGGGCTGCCCGGCGCGCCGCGCTCCCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGA 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS GCA 90 bp | TTGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTGCCCGCGCCAGTaGCCGCCGGGGTGCGGCGAGACAGAACCTGGGAGCGCGGCGCGC | + |
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Preference number: 5 (lower is better) Translates to: LSPGRSPRQRPCPRQ*PPGCGETEPGSAAR Trigger: GCGCGCCGCGCTCCCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAA 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS GCA 90 bp | TTCTGGAGTACGTTGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTaGCCGCGCCAGTGCCCGCCGGGGTGCGGCGAGACAGAACCTGGG | + |
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Preference number: 5 (lower is better) Translates to: FWSTLSPGRSPRQRP*PRQCPPGCGETEPG Trigger: CCCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 90 bp | CGGTGCGTGCAGCCGCGCCGCACTGGGCAAACCGGCACGTCCAGCTaGCTCCAGAAGTCTCACTCGGAACCCGCTCCTTTTTCTCCTGAG | + |
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Preference number: 5 (lower is better) Translates to: RCVQPRRTGQTGTSS*LQKSHSEPAPFSPE Trigger: CTCAGGAGAAAAAGGAGCGGGTTCCGAGTGAGACTTCTGGAGCCAGCTGGACGTGCCGGTTTGCCCAGTGCGGCGCGGCTGCACGCACCG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 90 bp | CTGAGTGAAGGTTCCTTGTGGACGGTGCGTGCAGCCGCGCCGCACTaGGCAAACCGGCACGTCCAGCTGGCTCCAGAAGTCTCACTCGGA | + |
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Preference number: 5 (lower is better) Translates to: LSEGSLWTVRAAAPH*ANRHVQLAPEVSLG Trigger: TCCGAGTGAGACTTCTGGAGCCAGCTGGACGTGCCGGTTTGCCCAGTGCGGCGCGGCTGCACGCACCGTCCACAAGGAACCTTCACTCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS TCA 90 bp | TGGATCAGAGCACTGCTTCTCTCAACATTCGATTCTGGAGTACGTTaGGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTGCCCGCGCCAGT | + |
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Preference number: 5 (lower is better) Translates to: WIRALLLSTFDSGVR*AQGVLPASVLARAS Trigger: ACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGCTCTGATCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 90 bp | TCTCCTGAGCTGGATCAGAGCACTGCTTCTCTCAACATTCGATTCTaGAGTACGTTGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTGC | + |
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Preference number: 5 (lower is better) Translates to: SPELDQSTASLNIRF*STLSPGRSPRQRPC Trigger: GCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGCTCTGATCCAGCTCAGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS TCA 90 bp | CAGCTGGCTCCAGAAGTCTCACTCGGAACCCGCTCCTTTTTCTCCTaGGCTGGATCAGAGCACTGCTTCTCTCAACATTCGATTCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: QLAPEVSLGTRSFFS*AGSEHCFSQHSILE Trigger: CTCCAGAATCGAATGTTGAGAGAAGCAGTGCTCTGATCCAGCTCAGGAGAAAAAGGAGCGGGTTCCGAGTGAGACTTCTGGAGCCAGCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 90 bp | GGCTCCAGAAGTCTCACTCGGAACCCGCTCCTTTTTCTCCTGAGCTaGATCAGAGCACTGCTTCTCTCAACATTCGATTCTGGAGTACGT | + |
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Preference number: 5 (lower is better) Translates to: GSRSLTRNPLLFLLS*IRALLLSTFDSGVR Trigger: ACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGCTCTGATCCAGCTCAGGAGAAAAAGGAGCGGGTTCCGAGTGAGACTTCTGGAGCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | GTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGGCTGGCTGGTGGAGCTTCTaGGTGGTGCCAATAGCCATG | + |
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Preference number: 5 (lower is better) Translates to: VCSRINKLHPLPPSTHEAGWWSF*VVPIAM Trigger: CATGGCTATTGGCACCACCAAGAAGCTCCACCAGCC...AGCCTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | GAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATATCAGCGCGGCCCTCTaGGCCGTCCTCTTCCTGGCG | + |
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Preference number: 5 (lower is better) Translates to: ETRPHILTNSPEPSMFKNISAAL*AVLFLA Trigger: CGCCAGGAAGAGGACGGCCAAGAGGGCCGCGCTGAT...ATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | TCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAACACTGAGTGAAGGTTCCTaGTGGACGGTGCGTGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: SQIRPEVENSTPNNNPQTLSEGS*WTVRAA Trigger: GGCTGCACGCACCGTCCACAAGGAACCTTCACTCAG...TGTTTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | GAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATCGATTCTGGAGTACGTaGAGCCCAGGGCGTTCTCCC | + |
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Preference number: 5 (lower is better) Translates to: ETRPHILTNSPEPSMFKNRFWST*SPGRSP Trigger: GGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCG...ATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 90 bp | TGTTGCTTAAGTGCCGACTTGATCCCCTTTTCTGGTAAAGGCTCTTaGCCGCGTGGTAAATCCGGTAATAGAGAATCAGTATCAAAGTCA | + |
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Preference number: 5 (lower is better) Translates to: CCLSADLIPFSGKGS*PRGKSGNRESVSKS Trigger: TGACTTTGATACTGATTCTCTATTACCGGATTTACCACGCGGCCAAGAGCCTTTACCAGAAAAGGGGATCAAGTCGGCACTTAAGCAACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | GTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCCCATCCACTCATGAGGCTCAGCTATGTGGTCTCTaGTGTTCCATTTTCTGTTGG | + |
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Preference number: 5 (lower is better) Translates to: VCSRINKLHPLPPSTHEAQLCGL*CSIFCW Trigger: CCAACAGAAAATGGAACACAAGAGACCACATAGCTG...AGCCTCATGAGTGGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGAACATAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | GTATCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAATTCTCAGTGATGGTCTaGGGTCTTATAGCCATGCTG | + |
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Preference number: 5 (lower is better) Translates to: VSQIRPEVENSTPNNNPQFSVMV*GLIAML Trigger: CAGCATGGCTATAAGACCCAAGACCATCACTGAGAA...TTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | CAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCTTACCCTGCTTAAGTGCCGACTaGATCCCCTTTTCTGGTAAA | + |
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Preference number: 5 (lower is better) Translates to: QTLLNQVCSRINKLHPLPCLSAD*IPFSGK Trigger: TTTACCAGAAAAGGGGATCAAGTCGGCACTTAAGCA...GGGTAAGGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | TCACAGATAAGACCAGAGGTAGAAAACAGCACGCCAAATAACAATCCTCAAACACCCACAATCAACTCTTaGATGAAAAATGGCAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SQIRPEVENSTPNNNPQTPTINS*MKNGSQ Trigger: CTGGCTGCCATTTTTCATCAAAGAGTTGATTGTGGG...TGTTTGAGGATTGTTATTTGGCGTGCTGTTTTCTACCTCTGGTCTTATCTGTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | TACTTACAAACTCTCCTGAACCAAGTATGTTCAAGAATTAATAAGTTGCACCCCGTGTTCCATTTTCTGTaGGTAAAGGGAAGGGCCACA | + |
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Preference number: 5 (lower is better) Translates to: YLQTLLNQVCSRINKLHPVFHFL*VKGRAT Trigger: TGTGGCCCTTCCCTTTACCAACAGAAAATGGAACAC...GGGGTGCAACTTATTAATTCTTGAACATACTTGGTTCAGGAGAGTTTGTAAGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS-3UTR CAA 90 bp | ACAAACAAGGAAACAAGACCACACATACTTACAAACTCTCCTGAACCAAGTATGTCAAGAATTAATAAGTaGCACCCCTTACCCCCATCC | + |
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Preference number: 5 (lower is better) Translates to: TNKETRPHILTNSPEPSMSRINK*HPLPPS Trigger: GGATGGGGGTAAGGGGTGCAACTTATTAATTCTTGA...CATACTTGGTTCAGGAGAGTTTGTAAGTATGTGTGGTCTTGTTTCCTTGTTTGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS GCA 72 bp | GGGCGTTCTCCCCGCCAGCGTCCTTGCCCGCGCCAGTaGCCGCCGGGGTGCGGCGAGACAGAACCTGGGAGC | + |
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Preference number: 6 (lower is better) Translates to: GRSPRQRPCPRQ*PPGCGETEPGS Trigger: GCTCCCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCC 76% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS GCA 72 bp | ACGTTGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTaGCCGCGCCAGTGCCCGCCGGGGTGCGGCGAGACA | + |
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Preference number: 6 (lower is better) Translates to: TLSPGRSPRQRP*PRQCPPGCGET Trigger: TGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGT 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 72 bp | TACGTTGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTaGCCCGCGCCAGTGCCCGCCGGGGTGCGGCGAGAC | + |
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Preference number: 6 (lower is better) Translates to: YVEPRAFSPPAS*PAPVPAGVRRD Trigger: GTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 90 bp | ATTCTGGAGTACGTTGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTaGCCCGCGCCAGTGCCCGCCGGGGTGCGGCGAGACAGAACCTGG | + |
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Preference number: 6 (lower is better) Translates to: ILEYVEPRAFSPPAS*PAPVPAGVRRDRTW Trigger: CCAGGTTCTGTCTCGCCGCACCCCGGCGGGCACTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAAT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 72 bp | GGTTCCTTGTGGACGGTGCGTGCAGCCGCGCCGCACTaGGCAAACCGGCACGTCCAGCTGGCTCCAGAAGTC | + |
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Preference number: 6 (lower is better) Translates to: GSLWTVRAAAPH*ANRHVQLAPEV Trigger: GACTTCTGGAGCCAGCTGGACGTGCCGGTTTGCCCAGTGCGGCGCGGCTGCACGCACCGTCCACAAGGAACC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 72 bp | CAGCCGCGCCGCACTGGGCAAACCGGCACGTCCAGCTaGCTCCAGAAGTCTCACTCGGAACCCGCTCCTTTT | + |
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Preference number: 6 (lower is better) Translates to: QPRRTGQTGTSS*LQKSHSEPAPF Trigger: AAAAGGAGCGGGTTCCGAGTGAGACTTCTGGAGCCAGCTGGACGTGCCGGTTTGCCCAGTGCGGCGCGGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 90 bp | CTGGATCAGAGCACTGCTTCTCTCAACATTCGATTCTGGAGTACGTaGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTGCCCGCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LDQSTASLNIRFWST*SPGRSPRQRPCPRQ Trigger: CTGGCGCGGGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGCTCTGATCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS TCA 72 bp | GCACTGCTTCTCTCAACATTCGATTCTGGAGTACGTTaGGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: ALLLSTFDSGVR*AQGVLPASVLA Trigger: GGCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 72 bp | AGCACTGCTTCTCTCAACATTCGATTCTGGAGTACGTaGAGCCCAGGGCGTTCTCCCCGCCAGCGTCCTTGC | + |
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Preference number: 6 (lower is better) Translates to: STASLNIRFWST*SPGRSPRQRPC Trigger: GCAAGGACGCTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS GCA 72 bp | AATGAATGCACCCAGAATCAGCCCCAGGATGCGTGCTaGCTTCCGTTCCCTGGTGCTAGAGATCTGCTGACG | + |
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Preference number: 6 (lower is better) Translates to: NECTQNQPQDAC*LPFPGARDLLT Trigger: CGTCAGCAGATCTCTAGCACCAGGGAACGGAAGGCAGCACGCATCCTGGGGCTGATTCTGGGTGCATTCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 72 bp | CTGGATCAGAGCACTGCTTCTCTCAACATTCGATTCTaGAGTACGTTGAGCCCAGGGCGTTCTCCCCGCCAG | + |
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Preference number: 6 (lower is better) Translates to: LDQSTASLNIRF*STLSPGRSPRQ Trigger: CTGGCGGGGAGAACGCCCTGGGCTCAACGTACTCCAGAATCGAATGTTGAGAGAAGCAGTGCTCTGATCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 72 bp | ATGGTCCAGACGGTAAGGATCATCAGCGCGGCCCTCTaGGCCGTCCTCTTCCTGGCGTATTCAATAGCATTG | + |
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Preference number: 6 (lower is better) Translates to: MVQTVRIISAAL*AVLFLAYSIAL Trigger: CAATGCTATTGAATACGCCAGGAAGAGGACGGCCAAGAGGGCCGCGCTGATGATCCTTACCGTCTGGACCAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 90 bp | AAAATGGAGATGGTCCAGACGGTAAGGATCATCAGCGCGGCCCTCTaGGCCGTCCTCTTCCTGGCGTATTCAATAGCATTGGTGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: KMEMVQTVRIISAAL*AVLFLAYSIALVMA Trigger: GGCCATCACCAATGCTATTGAATACGCCAGGAAGAGGACGGCCAAGAGGGCCGCGCTGATGATCCTTACCGTCTGGACCATCTCCATTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 72 bp | TCTGGCTATCTGTGCTTCTGTTGCTTAAGTGCCGACTaGATCCCCTTTTCTGGTAAAGGCTCTTGGCCGCGT | + |
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Preference number: 6 (lower is better) Translates to: SGYLCFCCLSAD*IPFSGKGSWPR Trigger: ACGCGGCCAAGAGCCTTTACCAGAAAAGGGGATCAAGTCGGCACTTAAGCAACAGAAGCACAGATAGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CCA 72 bp | AGTGCCGACTTGATCCCCTTTTCTGGTAAAGGCTCTTaGCCGCGTGGTAAATCCGGTAATAGAGAATCAGTA | + |
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Preference number: 6 (lower is better) Translates to: SADLIPFSGKGS*PRGKSGNRESV Trigger: TACTGATTCTCTATTACCGGATTTACCACGCGGCCAAGAGCCTTTACCAGAAAAGGGGATCAAGTCGGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 72 bp | AGAGTCATGCAAATGAGCATCTTCTCAGTGATGGTCTaGGGTCTTATAGCCATGCTGGCCTCTGTGGTACAG | + |
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Preference number: 6 (lower is better) Translates to: RVMQMSIFSVMV*GLIAMLASVVQ Trigger: CTGTACCACAGAGGCCAGCATGGCTATAAGACCCAAGACCATCACTGAGAAGATGCTCATTTGCATGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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| CDS CAA 90 bp | ATGACCACCAGAGTCATGCAAATGAGCATCTTCTCAGTGATGGTCTaGGGTCTTATAGCCATGCTGGCCTCTGTGGTACAGTTTGTGATG | + |
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Preference number: 6 (lower is better) Translates to: MTTRVMQMSIFSVMV*GLIAMLASVVQFVM Trigger: CATCACAAACTGTACCACAGAGGCCAGCATGGCTATAAGACCCAAGACCATCACTGAGAAGATGCTCATTTGCATGACTCTGGTGGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000305344.7 |
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