RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HTR1D (Homo sapiens)

Ensembl gene IDs: ENSG00000179546

Ensembl transcript IDs: ENST00000374619.1, ENST00000374619.2

Found 37 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp TCTGAATCTCTCTCCAAGTCACTCTATATCATCGGCACTGCAAATACTGTCTTTAGCACTTTGGGATGCTaGGGCGGGCGGATCACGAGG +
Preference number: 2 (lower is better)
Translates to: SESLSKSLYIIGTANTVFSTLGC*GGRITR
Trigger: CCTCGTGATCCGCCCGCCTCAGCATCCCAAAGTGCT...AAAGACAGTATTTGCAGTGCCGATGATATAGAGTGACTTGGAGAGAGATTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR CCA 90 bp GGGGGTGGGCGTCTAAAGCCGGTCAATCTACCTCAAAGGGGTGATCATGGGTTTAATGGAGACCCATCCTaGCTCCAAATTCTCTTTCAA +
Preference number: 2 (lower is better)
Translates to: GGGRLKPVNLPQRGDHGFNGDPS*LQILFQ
Trigger: TTGAAAGAGAATTTGGAGCCAGGATGGGTCTCCATT...AAACCCATGATCACCCCTTTGAGGTAGATTGACCGGCTTTAGACGCCCACCCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp GAAGGGTACAGGGTAGTCAATCTGGTCCCAACCATCCTACCCCCGCTACCCCTAAACAATTCTGTTGATTaGACCAAGACTCAAGATACC +
Preference number: 2 (lower is better)
Translates to: EGYRVVNLVPTILPPLPLNNSVD*TKTQDT
Trigger: GGTATCTTGAGTCTTGGTTCAATCAACAGAATTGTT...TAGGGGTAGCGGGGGTAGGATGGTTGGGACCAGATTGACTACCCTGTACCCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp TTTTCCAATCAAGGTGCCACACAGAATGGAGACCCATCCTGGCTCCAAATTCTCAGAGAGCCTTCCCTCTaGGTCTGGGGTCTTTTCTAT +
Preference number: 2 (lower is better)
Translates to: FSNQGATQNGDPSWLQILREPSL*VWGLFY
Trigger: ATAGAAAAGACCCCAGACTCAGAGGGAAGGCTCTCT...GAGAATTTGGAGCCAGGATGGGTCTCCATTCTGTGTGGCACCTTGATTGGAAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp CTCTCCAAGTCACTCTATATCATCGGCACTGCAAATACTGTCTTTCTCTTCACGATGCGGAGGTTGCAGTaGGCTGAGATTGTGCCACTA +
Preference number: 2 (lower is better)
Translates to: LSKSLYIIGTANTVFLFTMRRLQ*AEIVPL
Trigger: TAGTGGCACAATCTCAGCTCACTGCAACCTCCGCAT...CGTGAAGAGAAAGACAGTATTTGCAGTGCCGATGATATAGAGTGACTTGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp CTCTCCAAGTCACTCTATATCATCGGCACTGCAAATACTGTCTTTCTCTTCACGATTAGCTGGGCCTGGTaGCACACGTTTGTAGTCCCA +
Preference number: 2 (lower is better)
Translates to: LSKSLYIIGTANTVFLFTISWAW*HTFVVP
Trigger: TGGGACTACAAACGTGTGTCACCAGGCCCAGCTAAT...CGTGAAGAGAAAGACAGTATTTGCAGTGCCGATGATATAGAGTGACTTGGAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR GCA 90 bp ACTCAGTGGAAGAAACGCATGGATATTATTTTCCAATCAAGGTGCCACACAGAACCGGGATGCGGAGGTTaGAGTGAGCTGAGATTGTGC +
Preference number: 2 (lower is better)
Translates to: TQWKKRMDIIFQSRCHTEPGCGG*SELRLC
Trigger: GCACAATCTCAGCTCACTGCAACCTCCGCATCCCGG...TTCTGTGTGGCACCTTGATTGGAAAATAATATCCATGCGTTTCTTCCACTGAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp CTCTCCAAGTCACTCTATATCATCGGCACTGCAAATACTGTCTTTCTCTTCACGAAACAGTTTCTCACCTaGACTGTATCAACCAGGAAT +
Preference number: 2 (lower is better)
Translates to: LSKSLYIIGTANTVFLFTKQFLT*TVSTRN
Trigger: ATTCCTGGTTGATACAGTTCAGGTGAGAAACTGTTT...CGTGAAGAGAAAGACAGTATTTGCAGTGCCGATGATATAGAGTGACTTGGAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp TCTGAATCTCTCTCCAAGTCACTCTATATCATCGGCACTGCAAATACTGTCTTTAAAAGACAATCCCGATaGGGTTACAGGACACAAAAG +
Preference number: 2 (lower is better)
Translates to: SESLSKSLYIIGTANTVFKRQSR*GYRTQK
Trigger: CTTTTGTGTCCTGTAACCTCATCGGGATTGTCTTTT...AAAGACAGTATTTGCAGTGCCGATGATATAGAGTGACTTGGAGAGAGATTCAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR TCA 90 bp ACTCAGTGGAAGAAACGCATGGATATTATTTTCCAATCAAGGTGCCACACAGAAAGACTCAAGATACCATaGATTAATCCAAGTCTCAGA +
Preference number: 2 (lower is better)
Translates to: TQWKKRMDIIFQSRCHTERLKIP*INPSLR
Trigger: TCTGAGACTTGGATTAATTCATGGTATCTTGAGTCT...TTCTGTGTGGCACCTTGATTGGAAAATAATATCCATGCGTTTCTTCCACTGAGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR-3UTR CAA 90 bp GGGGGTGGGCGTCTAAAGCCGGTCAATCTACCTCAAAGGGGTGATCATGGGTTTGATGGCGCAGGCATATaGGGGAAGAAGGAAGGGTAC +
Preference number: 3 (lower is better)
Translates to: GGGRLKPVNLPQRGDHGFDGAGI*GKKEGY
Trigger: GTACCCTTCCTTCTTCCCCAATATGCCTGCGCCATC...AAACCCATGATCACCCCTTTGAGGTAGATTGACCGGCTTTAGACGCCCACCCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000374619.1
3UTR TCA 72 bp TGGGCGTCTAAAGCCGGTCAATCTACCTCAAAGGGGTaGTCATGGGTTTCAACTTCAGAATGTGAAGATGGC +
Preference number: 3 (lower is better)
Translates to: WASKAGQSTSKG*SWVSTSECEDG
Trigger: GCCATCTTCACATTCTGAAGTTGAAACCCATGATCACCCCTTTGAGGTAGATTGACCGGCTTTAGACGCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.1
CDS TCA 90 bp AGAGCCTGTGATGAGGTGGGCCGTGGTGAAGCGCTTCCCATAGAGTaGGGGTGGATTCAGGATGCGGTTCCGGGCAGCCCGGTAGATCCG +
Preference number: 5 (lower is better)
Translates to: RACDEVGRGEALPIE*GWIQDAVPGSPVDP
Trigger: CGGATCTACCGGGCTGCCCGGAACCGCATCCTGAATCCACCCTCACTCTATGGGAAGCGCTTCACCACGGCCCACCTCATCACAGGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 90 bp GCAGTCCAGTCAGCACAGCAGCTCGCGGTTTTCCCAGGTTCATCTTaGCGCATCCTGAGCTACTTAACTTCGGTTCCTATCCCACTGATC +
Preference number: 5 (lower is better)
Translates to: AVQSAQQLAVFPGSS*RILSYLTSVPIPLI
Trigger: GATCAGTGGGATAGGAACCGAAGTTAAGTAGCTCAGGATGCGTCAAGATGAACCTGGGAAAACCGCGAGCTGCTGTGCTGACTGGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 90 bp TCACACCCAGGTGGGCAATGCCCTGGGATTCTTGCCTTTGGCATCTaGCTCTTTTCAAAGCTTGAGACATTCGTGTGTTTAATGAGAACT +
Preference number: 5 (lower is better)
Translates to: SHPGGQCPGILAFGI*LFSKLETFVCLMRT
Trigger: AGTTCTCATTAAACACACGAATGTCTCAAGCTTTGAAAAGAGCCAGATGCCAAAGGCAAGAATCCCAGGGCATTGCCCACCTGGGTGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 90 bp TTCTGCTTCACACTGGTGGGAGCCGTACACCAGAACAGACCACAGTaGAAAGGTCTCAAGACCAGACTATTCTCTAAGTACAGTTGCAAT +
Preference number: 5 (lower is better)
Translates to: FCFTLVGAVHQNRPQ*KGLKTRLFSKYSCN
Trigger: ATTGCAACTGTACTTAGAGAATAGTCTGGTCTTGAGACCTTTTCACTGTGGTCTGTTCTGGTGTACGGCTCCCACCAGTGTGAAGCAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 90 bp ATGCCCTGGGATTCTTGCCTTTGGCATCTGGCTCTTTTCAAAGCTTaGGACATTCGTGTGTTTAATGAGAACTTCAGAATTCCCCTCACA +
Preference number: 5 (lower is better)
Translates to: MPWDSCLWHLALFKA*DIRVFNENFRIPLT
Trigger: TGTGAGGGGAATTCTGAAGTTCTCATTAAACACACGAATGTCTCAAGCTTTGAAAAGAGCCAGATGCCAAAGGCAAGAATCCCAGGGCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS GCA 72 bp GGCCCTTTCCGGCTCGCGCCCTCGCGATCCCGCACCTaGCTCCGCCTCTCCCAGAGCCCTGCGGCTCCTTCT +
Preference number: 6 (lower is better)
Translates to: GPFRLAPSRSRT*LRLSQSPAAPS
Trigger: AGAAGGAGCCGCAGGGCTCTGGGAGAGGCGGAGGCAGGTGCGGGATCGCGAGGGCGCGAGCCGGAAAGGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS GCA 72 bp GGACACATTCAGAAGATCCGCTGCCCGGCGGGCAGGTaGGCACACCCGGCGTACCCGCCCGATCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: GHIQKIRCPAGR*AHPAYPPDPLP
Trigger: AGGAAGTGGATCGGGCGGGTACGCCGGGTGTGCGCACCTGCCCGCCGGGCAGCGGATCTTCTGAATGTGTCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 72 bp GGGGGATGGAGATGCAGATGGAGATGGCCCAGACAATaGCGATCATGGTGGCCGCGTGGCCAGCCGTCCTGC +
Preference number: 6 (lower is better)
Translates to: GGWRCRWRWPRQ*RSWWPRGQPSC
Trigger: GCAGGACGGCTGGCCACGCGGCCACCATGATCGCCATTGTCTGGGCCATCTCCATCTGCATCTCCATCCCCC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 72 bp GATGAGGTGGGCCGTGGTGAAGCGCTTCCCATAGAGTaGGGGTGGATTCAGGATGCGGTTCCGGGCAGCCCG +
Preference number: 6 (lower is better)
Translates to: DEVGRGEALPIE*GWIQDAVPGSP
Trigger: CGGGCTGCCCGGAACCGCATCCTGAATCCACCCTCACTCTATGGGAAGCGCTTCACCACGGCCCACCTCATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 72 bp GAGATGGCCCAGACAATGGCGATCATGGTGGCCGCGTaGCCAGCCGTCCTGCGTTTACTGTATTCCAGGGCA +
Preference number: 6 (lower is better)
Translates to: EMAQTMAIMVAA*PAVLRLLYSRA
Trigger: TGCCCTGGAATACAGTAAACGCAGGACGGCTGGCCACGCGGCCACCATGATCGCCATTGTCTGGGCCATCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 72 bp CTTGAGCGCCTGGAGGGTCCTGGGATCCCAAGCCTCTaGGGTTTCTGTGGCATTCAGGGATCTGTTGGAGGC +
Preference number: 6 (lower is better)
Translates to: LERLEGPGIPSL*GFCGIQGSVGG
Trigger: GCCTCCAACAGATCCCTGAATGCCACAGAAACCTCAGAGGCTTGGGATCCCAGGACCCTCCAGGCGCTCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CAA 72 bp CACACCCAGGTGGGCAATGCCCTGGGATTCTTGCCTTaGGCATCTGGCTCTTTTCAAAGCTTGAGACATTCG +
Preference number: 6 (lower is better)
Translates to: HTQVGNALGFLP*ASGSFQSLRHS
Trigger: CGAATGTCTCAAGCTTTGAAAAGAGCCAGATGCCAAAGGCAAGAATCCCAGGGCATTGCCCACCTGGGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CAA 90 bp AGCAGTCCAGTCAGCACAGCAGCTCGCGGTTTTCCCAGGTTCATCTaGACGCATCCTGAGCTACTTAACTTCGGTTCCTATCCCACTGAT +
Preference number: 6 (lower is better)
Translates to: SSPVSTAARGFPRFI*THPELLNFGSYPTD
Trigger: ATCAGTGGGATAGGAACCGAAGTTAAGTAGCTCAGGATGCGTCAAGATGAACCTGGGAAAACCGCGAGCTGCTGTGCTGACTGGACTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CAA 90 bp GGGGACATGCTAGGTGGCTCTCTCTTCCCACAGACCTCCACACATTaGGCTCCTTCCTTCAAGGTTGTCCTGACAACAGAGCAAAGTCAT +
Preference number: 6 (lower is better)
Translates to: GDMLGGSLFPQTSTH*APSFKVVLTTEQSH
Trigger: ATGACTTTGCTCTGTTGTCAGGACAACCTTGAAGGAAGGAGCCAAATGTGTGGAGGTCTGTGGGAAGAGAGAGCCACCTAGCATGTCCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 72 bp TCAGCACAGCAGCTCGCGGTTTTCCCAGGTTCATCTTaGCGCATCCTGAGCTACTTAACTTCGGTTCCTATC +
Preference number: 6 (lower is better)
Translates to: SAQQLAVFPGSS*RILSYLTSVPI
Trigger: GATAGGAACCGAAGTTAAGTAGCTCAGGATGCGTCAAGATGAACCTGGGAAAACCGCGAGCTGCTGTGCTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 72 bp CTGACAACAGAGCAAAGTCATCCTTCTGCTTCACACTaGTGGGAGCCGTACACCAGAACAGACCACAGTGAA +
Preference number: 6 (lower is better)
Translates to: LTTEQSHPSASH*WEPYTRTDHSE
Trigger: TTCACTGTGGTCTGTTCTGGTGTACGGCTCCCACCAGTGTGAAGCAGAAGGATGACTTTGCTCTGTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CAA 72 bp GTCAGCACAGCAGCTCGCGGTTTTCCCAGGTTCATCTaGACGCATCCTGAGCTACTTAACTTCGGTTCCTAT +
Preference number: 6 (lower is better)
Translates to: VSTAARGFPRFI*THPELLNFGSY
Trigger: ATAGGAACCGAAGTTAAGTAGCTCAGGATGCGTCAAGATGAACCTGGGAAAACCGCGAGCTGCTGTGCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CAA 90 bp CAATTATCAGGGGATCACACCCAGGTGGGCAATGCCCTGGGATTCTaGCCTTTGGCATCTGGCTCTTTTCAAAGCTTGAGACATTCGTGT +
Preference number: 6 (lower is better)
Translates to: QLSGDHTQVGNALGF*PLASGSFQSLRHSC
Trigger: ACACGAATGTCTCAAGCTTTGAAAAGAGCCAGATGCCAAAGGCAAGAATCCCAGGGCATTGCCCACCTGGGTGTGATCCCCTGATAATTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 72 bp AATTATCAGGGGATCACACCCAGGTGGGCAATGCCCTaGGATTCTTGCCTTTGGCATCTGGCTCTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: NYQGITPRWAMP*DSCLWHLALFK
Trigger: TTTGAAAAGAGCCAGATGCCAAAGGCAAGAATCCCAGGGCATTGCCCACCTGGGTGTGATCCCCTGATAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 72 bp ACACTGGTGGGAGCCGTACACCAGAACAGACCACAGTaGAAAGGTCTCAAGACCAGACTATTCTCTAAGTAC +
Preference number: 6 (lower is better)
Translates to: TLVGAVHQNRPQ*KGLKTRLFSKY
Trigger: GTACTTAGAGAATAGTCTGGTCTTGAGACCTTTTCACTGTGGTCTGTTCTGGTGTACGGCTCCCACCAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 72 bp GGTGGGCAATGCCCTGGGATTCTTGCCTTTGGCATCTaGCTCTTTTCAAAGCTTGAGACATTCGTGTGTTTA +
Preference number: 6 (lower is better)
Translates to: GGQCPGILAFGI*LFSKLETFVCL
Trigger: TAAACACACGAATGTCTCAAGCTTTGAAAAGAGCCAGATGCCAAAGGCAAGAATCCCAGGGCATTGCCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CCA 72 bp AATTTGTTAGACAATTATCAGGGGATCACACCCAGGTaGGCAATGCCCTGGGATTCTTGCCTTTGGCATCTG +
Preference number: 6 (lower is better)
Translates to: NLLDNYQGITPR*AMPWDSCLWHL
Trigger: CAGATGCCAAAGGCAAGAATCCCAGGGCATTGCCCACCTGGGTGTGATCCCCTGATAATTGTCTAACAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS CAA 72 bp TTAGTGGCTTTCCTTTCTCGAGCAGCAGAAATCCTCTaGCGTTCCAGGGCACTGTCAGCAAGCTTGATTTTC +
Preference number: 6 (lower is better)
Translates to: LVAFLSRAAEIL*RSRALSASLIF
Trigger: GAAAATCAAGCTTGCTGACAGTGCCCTGGAACGCAAGAGGATTTCTGCTGCTCGAGAAAGGAAAGCCACTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 72 bp AACTTCGGTTCCTATCCCACTGATCGTTTTAGAGCCTaGACAGACAAAACATCCTGGTTACCAAGACTCGAA +
Preference number: 6 (lower is better)
Translates to: NFGSYPTDRFRA*TDKTSWLPRLE
Trigger: TTCGAGTCTTGGTAACCAGGATGTTTTGTCTGTTCAGGCTCTAAAACGATCAGTGGGATAGGAACCGAAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000374619.2
CDS TCA 72 bp GATTCTTGCCTTTGGCATCTGGCTCTTTTCAAAGCTTaGGACATTCGTGTGTTTAATGAGAACTTCAGAATT +
Preference number: 6 (lower is better)
Translates to: DSCLWHLALFKA*DIRVFNENFRI
Trigger: AATTCTGAAGTTCTCATTAAACACACGAATGTCTCAAGCTTTGAAAAGAGCCAGATGCCAAAGGCAAGAATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000374619.2