Pregenerated sensors for HTN3 (Homo sapiens)
Ensembl gene IDs: ENSG00000205649Ensembl transcript IDs: ENST00000530128.5, ENST00000635585.1
Found 25 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | AGACTCTGGACACTACACCTTTGTCAGATGGGTAGACTGCAAAAATTTTCTCCCTTGGCATTTTCTTCATaGAGTCTTTGTCCATGCCTA | + |
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Preference number: 2 (lower is better) Translates to: RLWTLHLCQMGRLQKFSPLAFSS*SLCPCL Trigger: TAGGCATGGACAAAGACTTCATGAAGAAAATGCCAA...GGGAGAAAATTTTTGCAGTCTACCCATCTGACAAAGGTGTAGTGTCCAGAGTCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR-3UTR TCA 90 bp | GACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATGATAGTCCCAGTACCATTTATTaGCTAGGAGATCCTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: DCKNFLPISKLPVHSDDSPSTIY*LGDPFP Trigger: GGGAAAAGGATCTCCTAGTCAATAAATGGTACTGGG...ACTATCATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR-3UTR GCA 90 bp | ACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATGATAGTTAGATCCTTTTCCCATTaGTTGTTTTTGTCAGGATTG | + |
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Preference number: 2 (lower is better) Translates to: TAKIFSQSLSYLFTLMIVRSFSH*LFLSGL Trigger: CAATCCTGACAAAAACAAGCAATGGGAAAAGGATCT...AACTATCATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR-3UTR CCA 90 bp | ACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATGATAGTTTGTTGCCATTGCTTTTaGCATTTTCTTCATGAAGTC | + |
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Preference number: 2 (lower is better) Translates to: TAKIFSQSLSYLFTLMIVCCHCF*HFLHEV Trigger: GACTTCATGAAGAAAATGCCAAAAGCAATGGCAACA...AACTATCATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR-3UTR CAA 90 bp | AGACTCTGGACACTACACCTTTGTCAGATGGGTAGACTGCAAAAATTTTCTCCCTTCTTCATGAAGTCTTaGTCCATGCCTATGTCCCGA | + |
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Preference number: 3 (lower is better) Translates to: RLWTLHLCQMGRLQKFSPFFMKS*SMPMSR Trigger: TCGGGACATAGGCATGGACAAAGACTTCATGAAGAA...GGGAGAAAATTTTTGCAGTCTACCCATCTGACAAAGGTGTAGTGTCCAGAGTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR GCA 72 bp | GACTCTGGACACTACACCTTTGTCAGATGGGTAGACTaGAAAAATTTTCTCCCAATCTCTAAGTTACCTGTT | + |
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Preference number: 3 (lower is better) Translates to: DSGHYTFVRWVD*KNFLPISKLPV Trigger: AACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCATCTGACAAAGGTGTAGTGTCCAGAGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR CCA 72 bp | TTCCTTGTAGACTCTGGACACTACACCTTTGTCAGATaGGTAGACTGCAAAAATTTTCTCCCAATCTCTAAG | + |
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Preference number: 3 (lower is better) Translates to: FLVDSGHYTFVR*VDCKNFLPISK Trigger: CTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCATCTGACAAAGGTGTAGTGTCCAGAGTCTACAAGGAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR-3UTR CAA 90 bp | TGGGTAGACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATTCCTTTTCCCATTGCTaGTTTTTGTCAGGATTGTCG | + |
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Preference number: 3 (lower is better) Translates to: WVDCKNFLPISKLPVHSDSFSHC*FLSGLS Trigger: CGACAATCCTGACAAAAACAAGCAATGGGAAAAGGA...ATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| 3UTR-3UTR CAA 90 bp | TGGGTAGACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATGAGATCCTTTTCCCATaGCTTGTTTTTGTCAGGATT | + |
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Preference number: 3 (lower is better) Translates to: WVDCKNFLPISKLPVHSDEILFP*LVFVRI Trigger: AATCCTGACAAAAACAAGCAATGGGAAAAGGATCTC...ATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR TCA 90 bp | GATCCTTTTCCCATTGCTTGTTTTTGTCAGGATTGTCGTAGATCAGATAGCAAGCCCAGTACCATTTATTaGCTAGGAGATCCTTTTCCC | + |
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Preference number: 4 (lower is better) Translates to: DPFPIACFCQDCRRSDSKPSTIY*LGDPFP Trigger: GGGAAAAGGATCTCCTAGTCAATAAATGGTACTGGG...CTTGCTATCTGATCTACGACAATCCTGACAAAAACAAGCAATGGGAAAAGGATC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR TCA 90 bp | GTTTTTGTCAGGATTGTCGTAGATCAGATAGCAAGCAGAGACCTCCATAATCATAACTTCATAGTTGGCTaGGTCCTTTTACTCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: VFVRIVVDQIASRDLHNHNFIVG*VLLLKR Trigger: CCTCTTGAGTAAAAGGACTCAGCCAACTATGAAGTT...ATGATTATGGAGGTCTCTGCTTGCTATCTGATCTACGACAATCCTGACAAAAAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CCA 90 bp | AGACTCTGGACACTACACCTTTGTCAGATGGGTAGACTGCAAAAATTTTCTCCCTGTTGCCATTGCTTTTaGCATTTTCTTCATGAAGTC | + |
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Preference number: 4 (lower is better) Translates to: RLWTLHLCQMGRLQKFSPCCHCF*HFLHEV Trigger: GACTTCATGAAGAAAATGCCAAAAGCAATGGCAACA...GGGAGAAAATTTTTGCAGTCTACCCATCTGACAAAGGTGTAGTGTCCAGAGTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR TCA 90 bp | TGGGTAGACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATAACTTCATAGTTGGCTaGGTCCTTTTACTCAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: WVDCKNFLPISKLPVHSDNFIVG*VLLLKR Trigger: CCTCTTGAGTAAAAGGACTCAGCCAACTATGAAGTT...ATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR TCA 90 bp | TTGCTTGTTTTTGTCAGGATTGTCGTAGATCAGATAGCAAGCAGAGACCTCCATATTAGATCCCATTTGTaGATTTTGGCTTTTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LLVFVRIVVDQIASRDLHIRSHL*ILAFVA Trigger: GGCAACAAAAGCCAAAATTCACAAATGGGATCTAAT...ATGGAGGTCTCTGCTTGCTATCTGATCTACGACAATCCTGACAAAAACAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR GCA 90 bp | TTGCTTGTTTTTGTCAGGATTGTCGTAGATCAGATAGCAAGCAGAGACCTCCATAGATCCTTTTCCCATTaGTTGTTTTTGTCAGGATTG | + |
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Preference number: 4 (lower is better) Translates to: LLVFVRIVVDQIASRDLHRSFSH*LFLSGL Trigger: CAATCCTGACAAAAACAAGCAATGGGAAAAGGATCT...ATGGAGGTCTCTGCTTGCTATCTGATCTACGACAATCCTGACAAAAACAAGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR GCA 90 bp | GTTTTTGTCAGGATTGTCGTAGATCAGATAGCAAGCAGAGACCTCCATAATCATGTCAGATGGGTAGACTaGAAAAATTTTCTCCCAATC | + |
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Preference number: 4 (lower is better) Translates to: VFVRIVVDQIASRDLHNHVRWVD*KNFLPI Trigger: GATTGGGAGAAAATTTTTGCAGTCTACCCATCTGAC...ATGATTATGGAGGTCTCTGCTTGCTATCTGATCTACGACAATCCTGACAAAAAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR TCA 90 bp | TGGGTAGACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATTTGGCATTTTCTTCATaGAGTCTTTGTCCATGCCTA | + |
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Preference number: 4 (lower is better) Translates to: WVDCKNFLPISKLPVHSDLAFSS*SLCPCL Trigger: TAGGCATGGACAAAGACTTCATGAAGAAAATGCCAA...ATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR TCA 90 bp | CAGTTTTCCCAGTACCATTTATTGACTAGGAGATCCTTTTCCCATTGCTTGTTTATTAGATCCCATTTGTaGATTTTGGCTTTTGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: QFSQYHLLTRRSFSHCLFIRSHL*ILAFVA Trigger: GGCAACAAAAGCCAAAATTCACAAATGGGATCTAAT...AAACAAGCAATGGGAAAAGGATCTCCTAGTCAATAAATGGTACTGGGAAAACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | TTGCTTGTTTTTGTCAGGATTGTCGTAGATCAGATAGCAAGCAGAGACCTCCATTTCTTCATGAAGTCTTaGTCCATGCCTATGTCCCGA | + |
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Preference number: 5 (lower is better) Translates to: LLVFVRIVVDQIASRDLHFFMKS*SMPMSR Trigger: TCGGGACATAGGCATGGACAAAGACTTCATGAAGAA...ATGGAGGTCTCTGCTTGCTATCTGATCTACGACAATCCTGACAAAAACAAGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | ATGGCTAGCCAGTTTTCCCAGTACCATTTATTGACTAGGAGATCCTTTTCCCATTCCTTTTCCCATTGCTaGTTTTTGTCAGGATTGTCG | + |
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Preference number: 5 (lower is better) Translates to: MASQFSQYHLLTRRSFSHSFSHC*FLSGLS Trigger: CGACAATCCTGACAAAAACAAGCAATGGGAAAAGGA...ATGGGAAAAGGATCTCCTAGTCAATAAATGGTACTGGGAAAACTGGCTAGCCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | ATGGCTAGCCAGTTTTCCCAGTACCATTTATTGACTAGGAGATCCTTTTCCCATGAGATCCTTTTCCCATaGCTTGTTTTTGTCAGGATT | + |
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Preference number: 5 (lower is better) Translates to: MASQFSQYHLLTRRSFSHEILFP*LVFVRI Trigger: AATCCTGACAAAAACAAGCAATGGGAAAAGGATCTC...ATGGGAAAAGGATCTCCTAGTCAATAAATGGTACTGGGAAAACTGGCTAGCCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | CAGTTTTCCCAGTACCATTTATTGACTAGGAGATCCTTTTCCCATTGCTTGTTTTTCTTCATGAAGTCTTaGTCCATGCCTATGTCCCGA | + |
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Preference number: 5 (lower is better) Translates to: QFSQYHLLTRRSFSHCLFFFMKS*SMPMSR Trigger: TCGGGACATAGGCATGGACAAAGACTTCATGAAGAA...AAACAAGCAATGGGAAAAGGATCTCCTAGTCAATAAATGGTACTGGGAAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | TTTGGCATTTTCTTCATGAAGTCTTTGTCCATGCCTATGTCCCGAATGATATCATCCTTTTCCCATTGCTaGTTTTTGTCAGGATTGTCG | + |
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Preference number: 5 (lower is better) Translates to: FGIFFMKSLSMPMSRMISSFSHC*FLSGLS Trigger: CGACAATCCTGACAAAAACAAGCAATGGGAAAAGGA...TGATATCATTCGGGACATAGGCATGGACAAAGACTTCATGAAGAAAATGCCAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | TGGGTAGACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATTGTCATACAGATAATTaGATCTATAGCCTCGATGTG | + |
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Preference number: 5 (lower is better) Translates to: WVDCKNFLPISKLPVHSDCHTDN*IYSLDV Trigger: CACATCGAGGCTATAGATCAAATTATCTGTATGACA...ATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTCTACCCA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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| CDS-3UTR CAA 90 bp | GACTGCAAAAATTTTCTCCCAATCTCTAAGTTACCTGTTCACTCTGATGATAGTTGTCATACAGATAATTaGATCTATAGCCTCGATGTG | + |
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Preference number: 5 (lower is better) Translates to: DCKNFLPISKLPVHSDDSCHTDN*IYSLDV Trigger: CACATCGAGGCTATAGATCAAATTATCTGTATGACA...ACTATCATCAGAGTGAACAGGTAACTTAGAGATTGGGAGAAAATTTTTGCAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000530128.5 ENST00000635585.1 |
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