Pregenerated sensors for HTN1 (Homo sapiens)
Ensembl gene IDs: ENSG00000126550Ensembl transcript IDs: ENST00000506754.1, ENST00000511674.5, ENST00000634797.1, ENST00000635569.1
Found 29 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR CCA 90 bp | TGGATCCAAAGAAAAGCTCATATACCCAAGACAATTGTAAGCAAAAGAACAAAGCAACATACAGACCAATaGCACAGAACAGAGACCTCA | + |
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Preference number: 2 (lower is better) Translates to: WIQRKAHIPKTIVSKRTKQHTDQ*HRTETS Trigger: TGAGGTCTCTGTTCTGTGCCATTGGTCTGTATGTTG...CTTTGTTCTTTTGCTTACAATTGTCTTGGGTATATGAGCTTTTCTTTGGATCCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS-3UTR CCA 90 bp | AAAAGCTCATATACCCAAGACAATTGTAAGCAAAAGAACAAAGCTGAAGGCATCCAACATACAGACCAATaGCACAGAACAGAGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: KSSYTQDNCKQKNKAEGIQHTDQ*HRTETS Trigger: TGAGGTCTCTGTTCTGTGCCATTGGTCTGTATGTTG...GATGCCTTCAGCTTTGTTCTTTTGCTTACAATTGTCTTGGGTATATGAGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS-3UTR TCA 90 bp | AAACAACATACAGACCAATGGCACAGAACAGAGACCTCAGAAATAACACCACATTGGAAATTCTCGATGTaGATGATGCTTTTCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: KQHTDQWHRTETSEITPHWKFSM*MMLFME Trigger: TTCCATGAAAAGCATCATTCACATCGAGAATTTCCA...ATGTGGTGTTATTTCTGAGGTCTCTGTTCTGTGCCATTGGTCTGTATGTTGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS-3UTR CCA 90 bp | CAAAGAAAAGCTCATATACCCAAGACAATTGTAAGCAAAAGAACAAAGCTGAAGCAACATACAGACCAATaGCACAGAACAGAGACCTCA | + |
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Preference number: 4 (lower is better) Translates to: QRKAHIPKTIVSKRTKLKQHTDQ*HRTETS Trigger: TGAGGTCTCTGTTCTGTGCCATTGGTCTGTATGTTG...CTTCAGCTTTGTTCTTTTGCTTACAATTGTCTTGGGTATATGAGCTTTTCTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS-3UTR CCA 90 bp | AAAAGCTCATATACCCAAGACAATTGTAAGCAAAAGAACAAAGCTGAAGGCATCGTTACCAAAACAGCATaGTACCAGTACCAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: KSSYTQDNCKQKNKAEGIVTKTA*YQYQNN Trigger: GTTGTTTTGGTACTGGTACCATGCTGTTTTGGTAAC...GATGCCTTCAGCTTTGTTCTTTTGCTTACAATTGTCTTGGGTATATGAGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS-3UTR CCA 90 bp | CAAAGAAAAGCTCATATACCCAAGACAATTGTAAGCAAAAGAACAAAGCTGAAGGTTACCAAAACAGCATaGTACCAGTACCAAAACAAC | + |
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Preference number: 4 (lower is better) Translates to: QRKAHIPKTIVSKRTKLKVTKTA*YQYQNN Trigger: GTTGTTTTGGTACTGGTACCATGCTGTTTTGGTAAC...CTTCAGCTTTGTTCTTTTGCTTACAATTGTCTTGGGTATATGAGCTTTTCTTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS-3UTR TCA 90 bp | TGGATCCAAAGAAAAGCTCATATACCCAAGACAATTGTAAGCAAAAGAACAAAGTGGAAATTCTCGATGTaGATGATGCTTTTCATGGAA | + |
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Preference number: 4 (lower is better) Translates to: WIQRKAHIPKTIVSKRTKWKFSM*MMLFME Trigger: TTCCATGAAAAGCATCATTCACATCGAGAATTTCCA...CTTTGTTCTTTTGCTTACAATTGTCTTGGGTATATGAGCTTTTCTTTGGATCCA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000511674.5 ENST00000635569.1 |
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| CDS TCA 90 bp | CTCCCTGTCTTCACGTGTTCTCACTGTTCAGCTCCCACTTATGAGTaGGACCTTGTGCTGTTTCCTTTCTGTTCCTGTGTTAGTTTGCTG | + |
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Preference number: 5 (lower is better) Translates to: LPVFTCSHCSAPTYE*DLVLFPFCSCVSLL Trigger: CAGCAAACTAACACAGGAACAGAAAGGAAACAGCACAAGGTCTCACTCATAAGTGGGAGCTGAACAGTGAGAACACGTGAAGACAGGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CCA 90 bp | CATATGCAGAACATGCAGTTCTGTTACATAGGTATATGTGTGCCATaGTGGTTTGCTGCACCTATTGATCAGTCCTCTGTTACCTTCCCT | + |
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Preference number: 5 (lower is better) Translates to: HMQNMQFCYIGICVP*WFAAPIDQSSVTFP Trigger: AGGGAAGGTAACAGAGGACTGATCAATAGGTGCAGCAAACCACCATGGCACACATATACCTATGTAACAGAACTGCATGTTCTGCATATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS GCA 90 bp | CATCCATGTCCCTGCAAAGGACAGGATCTCATTCCTTTGTATGGCTaGATAGTACTCCATGGTGTATATGTACCACATTTTCTTTATCCA | + |
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Preference number: 5 (lower is better) Translates to: HPCPCKGQDLIPLYG*IVLHGVYVPHFLYP Trigger: TGGATAAAGAAAATGTGGTACATATACACCATGGAGTACTATGCAGCCATACAAAGGAATGAGATCCTGTCCTTTGCAGGGACATGGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CCA 90 bp | AAAACTGAGGTATGGAGAAGATTAGGAATAGTTCCAGGTCAGAACTaGAACTATAGTTCCTACCCAGAACTCAGCATCTTAACACTGGTG | + |
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Preference number: 5 (lower is better) Translates to: KTEVWRRLGIVPGQN*NYSSYPELSILTLV Trigger: CACCAGTGTTAAGATGCTGAGTTCTGGGTAGGAACTATAGTTCCAGTTCTGACCTGGAACTATTCCTAATCTTCTCCATACCTCAGTTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 90 bp | GTCATGGGATTGCTGCATCAAATGGTATTTCCGGTTCTAGATCCTTaGGGAATCACCATACTGTCTTCCACAATGGTTGAACTAATTTAC | + |
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Preference number: 5 (lower is better) Translates to: VMGLLHQMVFPVLDP*GITILSSTMVELIY Trigger: GTAAATTAGTTCAACCATTGTGGAAGACAGTATGGTGATTCCTCAAGGATCTAGAACCGGAAATACCATTTGATGCAGCAATCCCATGAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 90 bp | AGGTTTGTTGAATATCAGATGGCAAGCAGAGACCCAAATCATGAATaGACTCCCATTCACAATTGCTACAAAGAGAATAAAATACCTAGA | + |
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Preference number: 5 (lower is better) Translates to: RFVEYQMASRDPNHE*TPIHNCYKENKIPR Trigger: TCTAGGTATTTTATTCTCTTTGTAGCAATTGTGAATGGGAGTTCATTCATGATTTGGGTCTCTGCTTGCCATCTGATATTCAACAAACCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 90 bp | CTCTGTTACCTTCCCTTACTCCCTCCCCTCCATCCCTGGTTTGTGTaGTCCCCTCCCTGTCTTCACGTGTTCTCACTGTTCAGCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCYLPLLPPLHPWFV*SPPCLHVFSLFSSH Trigger: GTGGGAGCTGAACAGTGAGAACACGTGAAGACAGGGAGGGGACAACACAAACCAGGGATGGAGGGGAGGGAGTAAGGGAAGGTAACAGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 72 bp | AGGTATATGTGTGCCATGGTGGTTTGCTGCACCTATTaGTCAGTCCTCTGTTACCTTCCCTTACTCCCTCCC | + |
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Preference number: 6 (lower is better) Translates to: RYMCAMVVCCTY*SVLCYLPLLPP Trigger: GGGAGGGAGTAAGGGAAGGTAACAGAGGACTGATCAATAGGTGCAGCAAACCACCATGGCACACATATACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 72 bp | TGTCTTCACGTGTTCTCACTGTTCAGCTCCCACTTATaGGTGAGACCTTGTGCTGTTTCCTTTCTGTTCCTG | + |
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Preference number: 6 (lower is better) Translates to: CLHVFSLFSSHL*VRPCAVSFLFL Trigger: CAGGAACAGAAAGGAAACAGCACAAGGTCTCACTCATAAGTGGGAGCTGAACAGTGAGAACACGTGAAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 72 bp | GTTCTCACTGTTCAGCTCCCACTTATGAGTGAGACCTaGTGCTGTTTCCTTTCTGTTCCTGTGTTAGTTTGC | + |
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Preference number: 6 (lower is better) Translates to: VLTVQLPLMSET*CCFLSVPVLVC Trigger: GCAAACTAACACAGGAACAGAAAGGAAACAGCACAAGGTCTCACTCATAAGTGGGAGCTGAACAGTGAGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CCA 72 bp | ATGTCCCTGCAAAGGACAGGATCTCATTCCTTTGTATaGCTGCATAGTACTCCATGGTGTATATGTACCACA | + |
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Preference number: 6 (lower is better) Translates to: MSLQRTGSHSFV*LHSTPWCICTT Trigger: TGTGGTACATATACACCATGGAGTACTATGCAGCCATACAAAGGAATGAGATCCTGTCCTTTGCAGGGACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 72 bp | CATCCATGTCCCTGCAAAGGACAGGATCTCATTCCTTaGTATGGCTGCATAGTACTCCATGGTGTATATGTA | + |
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Preference number: 6 (lower is better) Translates to: HPCPCKGQDLIP*YGCIVLHGVYV Trigger: TACATATACACCATGGAGTACTATGCAGCCATACAAAGGAATGAGATCCTGTCCTTTGCAGGGACATGGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 90 bp | TTCCAGCTTCATCCATGTCCCTGCAAAGGACAGGATCTCATTCCTTaGTATGGCTGCATAGTACTCCATGGTGTATATGTACCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: FQLHPCPCKGQDLIP*YGCIVLHGVYVPHF Trigger: AAAATGTGGTACATATACACCATGGAGTACTATGCAGCCATACAAAGGAATGAGATCCTGTCCTTTGCAGGGACATGGATGAAGCTGGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS GCA 72 bp | CCCTGCAAAGGACAGGATCTCATTCCTTTGTATGGCTaGATAGTACTCCATGGTGTATATGTACCACATTTT | + |
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Preference number: 6 (lower is better) Translates to: PCKGQDLIPLYG*IVLHGVYVPHF Trigger: AAAATGTGGTACATATACACCATGGAGTACTATGCAGCCATACAAAGGAATGAGATCCTGTCCTTTGCAGGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CCA 72 bp | AACATGCAGTTCTGTTACATAGGTATATGTGTGCCATaGTGGTTTGCTGCACCTATTGATCAGTCCTCTGTT | + |
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Preference number: 6 (lower is better) Translates to: NMQFCYIGICVP*WFAAPIDQSSV Trigger: AACAGAGGACTGATCAATAGGTGCAGCAAACCACCATGGCACACATATACCTATGTAACAGAACTGCATGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 72 bp | TTGCTGCATCAAATGGTATTTCCGGTTCTAGATCCTTaGGGAATCACCATACTGTCTTCCACAATGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: LLHQMVFPVLDP*GITILSSTMVE Trigger: TTCAACCATTGTGGAAGACAGTATGGTGATTCCTCAAGGATCTAGAACCGGAAATACCATTTGATGCAGCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CCA 72 bp | GTATGGAGAAGATTAGGAATAGTTCCAGGTCAGAACTaGAACTATAGTTCCTACCCAGAACTCAGCATCTTA | + |
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Preference number: 6 (lower is better) Translates to: VWRRLGIVPGQN*NYSSYPELSIL Trigger: TAAGATGCTGAGTTCTGGGTAGGAACTATAGTTCCAGTTCTGACCTGGAACTATTCCTAATCTTCTCCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 72 bp | GTTCCTTGTAGATTCTGGATATTAGAGCTCGACAGATaGGTAGATTGCAAACATTTTCTCCCATTCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: VPCRFWILELDR*VDCKHFLPFSR Trigger: CCTAGAGAATGGGAGAAAATGTTTGCAATCTACTCATCTGTCGAGCTCTAATATCCAGAATCTACAAGGAAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 90 bp | CAGTGTAAAAGTGTTCTTGTCTCTCCACAGCATCACCTGCATCTATaGTTTCTTGACTTTTTAATAATCAGCATTCTGACTGGTAGTGAG | + |
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Preference number: 6 (lower is better) Translates to: QCKSVLVSPQHHLHL*FLDFLIISILTGSE Trigger: CTCACTACCAGTCAGAATGCTGATTATTAAAAAGTCAAGAAACAATAGATGCAGGTGATGCTGTGGAGAGACAAGAACACTTTTACACTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 72 bp | CTAATTTACATTCTCACACACAGTGTAAAAGTGTTCTaGTCTCTCCACAGCATCACCTGCATCTATTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: LIYILTHSVKVF*SLHSITCIYCF Trigger: GAAACAATAGATGCAGGTGATGCTGTGGAGAGACAAGAACACTTTTACACTGTGTGTGAGAATGTAAATTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS TCA 72 bp | GAATATCAGATGGCAAGCAGAGACCCAAATCATGAATaGACTCCCATTCACAATTGCTACAAAGAGAATAAA | + |
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Preference number: 6 (lower is better) Translates to: EYQMASRDPNHE*TPIHNCYKENK Trigger: TTTATTCTCTTTGTAGCAATTGTGAATGGGAGTTCATTCATGATTTGGGTCTCTGCTTGCCATCTGATATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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| CDS CAA 90 bp | ATGGTTGAACTAATTTACATTCTCACACACAGTGTAAAAGTGTTCTaGTCTCTCCACAGCATCACCTGCATCTATTGTTTCTTGACTTTT | + |
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Preference number: 6 (lower is better) Translates to: MVELIYILTHSVKVF*SLHSITCIYCFLTF Trigger: AAAAGTCAAGAAACAATAGATGCAGGTGATGCTGTGGAGAGACAAGAACACTTTTACACTGTGTGTGAGAATGTAAATTAGTTCAACCAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000506754.1 ENST00000634797.1 |
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