RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HTATIP2 (Homo sapiens)

Ensembl gene IDs: ENSG00000109854

Ensembl transcript IDs: ENST00000419348.6, ENST00000421577.6, ENST00000443524.6, ENST00000451739.7, ENST00000530266.5, ENST00000531058.1, ENST00000532081.1, ENST00000532505.1, ENST00000533914.1

Found 208 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR-3UTR TCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACACCAAAGCTCCCTGAGTaGTCTATATGTATAACCAGG +
Preference number: 2 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTPKLPE*SICITR
Trigger: CCTGGTTATACATATAGATCACTCAGGGAGCTTTGG...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR TCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTAGCACCATCATTTCTTaGTTGGAATGGATGCCTGAG +
Preference number: 2 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSISTIIS*LEWMPE
Trigger: CTCAGGCATCCATTCCAATCAAGAAATGATGGTGCT...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR CCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGCCATCATTTCTTGATTaGAATGGATGCCTGAGGATA +
Preference number: 2 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQPSFLD*NGCLRI
Trigger: TATCCTCAGGCATCCATTCCAATCAAGAAATGATGG...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR GCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACACTTGATTGGAATGGATaGCTGAGGATAGTAAAACAA +
Preference number: 2 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTLDWNG*LRIVKQ
Trigger: TTGTTTTACTATCCTCAGGCATCCATTCCAATCAAG...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR GCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAATTACAGATTATTGTaGCCACACCCCAGAAATTTT +
Preference number: 2 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTNYRLL*PHPRNF
Trigger: AAAATTTCTGGGGTGTGGGCACAATAATCTGTAATT...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR CAA 90 bp TATTTACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTaGAAAGACGAACTTATCAGTACTATTAAAAGGATACCAAAGGTT +
Preference number: 2 (lower is better)
Translates to: YLRRLQHWGLNSRIT*KDELISTIKRIPKV
Trigger: AACCTTTGGTATCCTTTTAATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGTAAATA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
3UTR-3UTR TCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 2 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR TCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 2 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR CAA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGCCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 3 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR TCA 72 bp GGCTCTGAACCACTGATGCAGAGCACCATCATTTCTTaGTTGGAATGGATGCCTGAGGATAGTAAAACAACA +
Preference number: 3 (lower is better)
Translates to: GSEPLMQSTIIS*LEWMPEDSKTT
Trigger: TGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCTGCATCAGTGGTTCAGAGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTGAAAATTACAGATTATaGTGCCCACACCCCAGAAAT +
Preference number: 3 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIENYRL*CPHPRN
Trigger: ATTTCTGGGGTGTGGGCACAATAATCTGTAATTTTC...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
3UTR-3UTR CAA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 3 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
3UTR TCA 72 bp AAATTACAGATTATTGTGCCCACACCCCAGAAATTTTaGTTCAAGTTTGAGATAGGGCTGACAAATCTTTAT +
Preference number: 3 (lower is better)
Translates to: KLQIIVPTPQKF*FKFEIGLTNLY
Trigger: ATAAAGATTTGTCAGCCCTATCTCAAACTTGAATCAAAATTTCTGGGGTGTGGGCACAATAATCTGTAATTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGGGAAGGGGCCCGAGCTaGAGGGTGCGCCCAGGTGCC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQGRGPS*RVRPGA
Trigger: GGCACCTGGGCGCACCCTCCAGCTCGGGCCCCTTCC...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CCA 90 bp CAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTCTGTTTCGGCCATGCTaGGGCCAGCCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: QHWGLNSRITLKDELISTLFRPC*GQPPAP
Trigger: CGGGGCCGGGGGCTGGCCCCAGCATGGCCGAAACAG...AGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532505.1
CDS-3UTR TCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTGCCATCGCCCGCACCTaGGCCAGCAGACCCATCGGA +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIAIART*ASRPIG
Trigger: TCCGATGGGTCTGCTGGCTCAGGTGCGGGCGATGGC...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR TCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCTCTGGGGAAAGTGCTaGGTCACGTGCGGGGCGCGG +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSILWGKC*VTCGAR
Trigger: CCGCGCCCCGCACGTGACTCAGCACTTTCCCCAGAG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCCCGGCCAGGAGACCTaGCCCAGCTCGGTCCCATAC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQPGQET*PSSVPY
Trigger: GTATGGGACCGAGCTGGGCCAGGTCTCCTGGCCGGG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CCA 90 bp TCATGTAAATATTTACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTGCTTGGTCTTCCGGGTaGCCTCGCGGCGACGCTGCC +
Preference number: 4 (lower is better)
Translates to: SCKYLRRLQHWGLNSRITAWSSG*PRGDAA
Trigger: GGCAGCGTCGCCGCGAGGCCACCCGGAAGACCAAGC...AGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGTAAATATTTACATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530266.5
CDS-3UTR GCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACTGTTTCGGCCATGCTaGGGCCAGCCCCCGGCCCCG +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQLFRPC*GQPPAP
Trigger: CGGGGCCGGGGGCTGGCCCCAGCATGGCCGAAACAG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000419348.6
CDS-3UTR GCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACACCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGGGTGTCAGGGGACTaGCAGTCCTTATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTRVSGD*QSLSRG
Trigger: TCCTCGGGATAAGGACTGGCAGTCCCCTGACACCCT...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGGCACAGAATGCCCACTaGCCCAAGAGTCTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQAQNAH*PKSLVR
Trigger: CCTTACCAGACTCTTGGGCCAGTGGGCATTCTGTGC...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCCAGGTGCCACAAGCTaGTGGCATCACTGGGCATAC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQPGATS*WHHWAY
Trigger: GTATGCCCAGTGATGCCAGCAGCTTGTGGCACCTGG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR GCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAGCCCGAGCTGGAGGGTaGGCCCAGGTGCCACAAGCT +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQARAGG*AQVPQA
Trigger: AGCTTGTGGCACCTGGGCGCACCCTCCAGCTCGGGC...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTAGCGCCTACCCGGCTTaGTCTTCCGGGTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSSAYPA*SSGWPR
Trigger: GCGAGGCCACCCGGAAGACCAAGCCGGGTAGGCGCT...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGAGCTGCTGGCATCACTaGGCATACCCCACGGTATCC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQSCWHH*AYPTVS
Trigger: GGATACCGTGGGGTATGCCCAGTGATGCCAGCAGCT...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR TCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGTGTATAACCAGGCTCTaGACCACTGATGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQCITRL*TTDAEH
Trigger: GTGCTCTGCATCAGTGGTTCAGAGCCTGGTTATACA...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCTTCTGTTTCGGCCATaGTGGGGCCAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSLLFRP*WGQPPA
Trigger: GGCCGGGGGCTGGCCCCAGCATGGCCGAAACAGAAG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000419348.6
CDS-3UTR GCA 90 bp TGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTATTAAACTTCTGTTTCGGCCATaGTGGGGCCAGCCCCCGGCC +
Preference number: 4 (lower is better)
Translates to: WGLNSRITLKDELISTIKLLFRP*WGQPPA
Trigger: GGCCGGGGGCTGGCCCCAGCATGGCCGAAACAGAAG...TTTAATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000532505.1
CDS-3UTR GCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTGCACCCTCCAGCTTTTaGCAGCTCTGCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIAPSSF*QLCRLQ
Trigger: CTGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGC...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419348.6
ENST00000451739.7
CDS-3UTR CCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACACAGCTTTCCCTCTGGTaGTACCCAGGCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTQLSLW*YPGNRI
Trigger: GATTCTGTTGCCTGGGTACCACCAGAGGGAAAGCTG...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCTCGGCCATGCCGGCTTaGTCTTCCGGGTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSSAMPA*SSGWPR
Trigger: GCGAGGCCACCCGGAAGACCAAGCCGGCATGGCCGA...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421577.6
CDS-3UTR CCA 90 bp TGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTATTAAATCGGCCATGCCGGCTTaGTCTTCCGGGTGGCCTCGC +
Preference number: 4 (lower is better)
Translates to: WGLNSRITLKDELISTIKSAMPA*SSGWPR
Trigger: GCGAGGCCACCCGGAAGACCAAGCCGGCATGGCCGA...TTTAATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530266.5
CDS-3UTR GCA 90 bp AATCACAATAGGCAAAATCATGTAAATATTTACGACGTCTCCAGCACTGGGGCCCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: NHNRQNHVNIYDVSSTGAPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...GGCCCCAGTGCTGGAGACGTCGTAAATATTTACATGATTTTGCCTATTGTGATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR GCA 90 bp AAATCATGTAAATATTTACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: KSCKYLRRLQHWGLNSRIPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...AATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGTAAATATTTACATGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR GCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAGAGGGTGCGCCCAGGTaGCACAAGCTGCTGGCATCA +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQEGAPR*HKLLAS
Trigger: TGATGCCAGCAGCTTGTGGCACCTGGGCGCACCCTC...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR GCA 90 bp AAATCATGTAAATATTTACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTAGGGTGTCAGGGGACTaGCAGTCCTTATCCCGAGGA +
Preference number: 4 (lower is better)
Translates to: KSCKYLRRLQHWGLNSRIRVSGD*QSLSRG
Trigger: TCCTCGGGATAAGGACTGGCAGTCCCCTGACACCCT...AATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGTAAATATTTACATGATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532081.1
CDS-3UTR CCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAACCAGCCATTCACCTaGGCGAGATTCTTGCCTATC +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTNQPFT*ARFLPI
Trigger: GATAGGCAAGAATCTCGCCCAGGTGAATGGCTGGTT...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGTCTCCAATGTGGTCATaGCTTGAGAGAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQSPMWS*LERAMR
Trigger: GCGCATGGCTCTCTCAAGCCATGACCACATTGGAGA...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp ACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTCTGTTTCGGCCATGCTaGGGAAATAACATCGACAGA +
Preference number: 4 (lower is better)
Translates to: TTSPALGPELKDYFERRTLFRPC*GNNIDR
Trigger: TCTGTCGATGTTATTTCCCCAGCATGGCCGAAACAG...AGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000532081.1
CDS-3UTR TCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTGTATAACCAGGCTCTaGACCACTGATGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSICITRL*TTDAEH
Trigger: GTGCTCTGCATCAGTGGTTCAGAGCCTGGTTATACA...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGTGTATAACCAGGCTCTaGACCACTGATGCAGAGCAC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQCITRL*TTDAEH
Trigger: GTGCTCTGCATCAGTGGTTCAGAGCCTGGTTATACA...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp CACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTATTCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: HWGLNSRITLKDELISTIPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...AATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR GCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCCAGCAGTTCCATCTaGTTGTCTCTTGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSISSSSI*LSLGLT
Trigger: GGTGAGACCAAGAGACAAGCAGATGGAACTGCTGGA...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACATTTTCATGGCTGCTGTaGCTCTGCAGACAAGCATTT +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTFSWLL*LCRQAF
Trigger: AAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAA...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCACATTGTTCAGCATTaGTCTAACCACGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQHIVQH*SNHGHH
Trigger: GTGGTGACCGTGGTTAGAGCAATGCTGAACAATGTG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTATAGGGAAAAGAGCATATaGCTTCCTTACCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: ALGPELKDYFERRTYQYYREKSI*LPYRPS
Trigger: GCTGGGGCGGTAAGGAAGGCATATGCTCTTTTCCCT...ATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR CCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCTGTTTCGGCCATGCTaGGGAAATAACATCGACAGA +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQLFRPC*GNNIDR
Trigger: TCTGTCGATGTTATTTCCCCAGCATGGCCGAAACAG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGAGCACCATCATTTCTTaGTTGGAATGGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQSTIIS*LEWMPE
Trigger: CTCAGGCATCCATTCCAATCAAGAAATGATGGTGCT...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACACCCCAGAAATTTTaGTTCAAGTTTGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQTPQKF*FKFEIG
Trigger: CCCTATCTCAAACTTGAATCAAAATTTCTGGGGTGT...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGTTTTCATGGCTGCTGTaGCTCTGCAGACAAGCATTT +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQFSWLL*LCRQAF
Trigger: AAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAA...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: TSPALGPELKDYFERRTYLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...ATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR GCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTAGCTTTTGCCAGCTCTaGAGACTTCAGCACATAATC +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSISFCQL*RLQHII
Trigger: GATTATGTGCTGAAGTCTGCAGAGCTGGCAAAAGCT...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419348.6
ENST00000451739.7
CDS-3UTR GCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCCTGGGCGAGATTCTTaGCTATCACATAACAGAACT +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIPGRDS*LSHNRT
Trigger: AGTTCTGTTATGTGATAGGCAAGAATCTCGCCCAGG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCCTGGGCGAGATTCTTaGCTATCACATAACAGAACT +
Preference number: 4 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQPGRDS*LSHNRT
Trigger: AGTTCTGTTATGTGATAGGCAAGAATCTCGCCCAGG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGAGCAGAGCTCATTTaGACGGTCATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTRAELI*TVIRFS
Trigger: TGAAAACCTTATGACCGTGCAAATGAGCTCTGCTCT...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp CAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTCTTCTGTTTCGGCCATaGTGGGGAAATAACATCGAC +
Preference number: 4 (lower is better)
Translates to: QHWGLNSRITLKDELISTLLFRP*WGNNID
Trigger: GTCGATGTTATTTCCCCAGCATGGCCGAAACAGAAG...AGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000532081.1
CDS-3UTR GCA 90 bp CACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTATTAGGGAAAAGAGCATATaGCTTCCTTACCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: HWGLNSRITLKDELISTIREKSI*LPYRPS
Trigger: GCTGGGGCGGTAAGGAAGGCATATGCTCTTTTCCCT...AATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR CCA 90 bp CAGCATAAACCAATTAGTTTTACTCAGACATCATGGTTTCCCTTAGTCAGGGGACAGCTTTCCCTCTGGTaGTACCCAGGCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: QHKPISFTQTSWFPLVRGQLSLW*YPGNRI
Trigger: GATTCTGTTGCCTGGGTACCACCAGAGGGAAAGCTG...TCCCCTGACTAAGGGAAACCATGATGTCTGAGTAAAACTAATTGGTTTATGCTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR CCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGGCACAGAATGCCCACTaGCCCAAGAGTCTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVAQNAH*PKSLVR
Trigger: CCTTACCAGACTCTTGGGCCAGTGGGCATTCTGTGC...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGTTTTCCAAAGCTCCCTaGGTGATCTATATGTATAAC +
Preference number: 4 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQFSKAP*VIYMYN
Trigger: GTTATACATATAGATCACTCAGGGAGCTTTGGAAAA...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAACACCCCAGAAATTTTaGTTCAAGTTTGAGATAGGG +
Preference number: 4 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTTPQKF*FKFEIG
Trigger: CCCTATCTCAAACTTGAATCAAAATTTCTGGGGTGT...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp ACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTCAAGAAAAGAATCCTTaGTATTACTGGCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: TTSPALGPELKDYFERRTQEKNP*YYWPAK
Trigger: TTTTGCTGGCCAGTAATATCAAGGATTCTTTTCTTG...AGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR GCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTAAGACGGATTTATTCTaGATCCTGAAGTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIKTDLF*ILKSSR
Trigger: TCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTT...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATCCTTTAAGAGCACTCTaGCGGTTTCTCCGCTGGCGC +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNPLRAL*RFLRWR
Trigger: GCGCCAGCGGAGAAACCGGCAGAGTGCTCTTAAAGG...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp CAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: QHWGLNSRITLKDELISTLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...AGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR GCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCGCACCCTCCAGCTTTTaGCAGCTCTGCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSAPSSF*QLCRLQ
Trigger: CTGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGC...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGTCTCCAATGTGGTCATaGCTTGAGAGAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVSPMWS*LERAMR
Trigger: GCGCATGGCTCTCTCAAGCCATGACCACATTGGAGA...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAATCTCCAATGTGGTCATaGCTTGAGAGAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQSPMWS*LERAMR
Trigger: GCGCATGGCTCTCTCAAGCCATGACCACATTGGAGA...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp CGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCCAAGAAAAGAATCCTTaGTATTACTGGCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: RLQHWGLNSRITLKDELIQEKNP*YYWPAK
Trigger: TTTTGCTGGCCAGTAATATCAAGGATTCTTTTCTTG...GATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR GCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGCACCCTCCAGCTTTTaGCAGCTCTGCAGACTTCAG +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNAPSSF*QLCRLQ
Trigger: CTGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGC...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR GCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTTCCAGCAGTTCCATCTaGTTGTCTCTTGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSSSSSI*LSLGLT
Trigger: GGTGAGACCAAGAGACAAGCAGATGGAACTGCTGGA...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGAATTACAGATTATTGTaGCCACACCCCAGAAATTTT +
Preference number: 4 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQNYRLL*PHPRNF
Trigger: AAAATTTCTGGGGTGTGGGCACAATAATCTGTAATT...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCAGCTTTCCCTCTGGTaGTACCCAGGCAACAGAATC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSQLSLW*YPGNRI
Trigger: GATTCTGTTGCCTGGGTACCACCAGAGGGAAAGCTG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGAACCAGCCATTCACCTaGGCGAGATTCTTGCCTATC +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVNQPFT*ARFLPI
Trigger: GATAGGCAAGAATCTCGCCCAGGTGAATGGCTGGTT...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGCACAGAATGCCCACTaGCCCAAGAGTCTGGTAAGG +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNAQNAH*PKSLVR
Trigger: CCTTACCAGACTCTTGGGCCAGTGGGCATTCTGTGC...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCTCTCCAATGTGGTCATaGCTTGAGAGAGCCATGCGC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSSPMWS*LERAMR
Trigger: GCGCATGGCTCTCTCAAGCCATGACCACATTGGAGA...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCCATCATTTCTTGATTaGAATGGATGCCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIPSFLD*NGCLRI
Trigger: TATCCTCAGGCATCCATTCCAATCAAGAAATGATGG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp CAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTTTTACTCAGACATCATaGTTTCCCTTAGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QHWGLNSRITLKDELISTFTQTS*FPLVRG
Trigger: TCCCCTGACTAAGGGAAACCATGATGTCTGAGTAAA...AGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR TCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTTTTCCAAAGCTCCCTaGGTGATCTATATGTATAAC +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIFSKAP*VIYMYN
Trigger: GTTATACATATAGATCACTCAGGGAGCTTTGGAAAA...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
42% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACACATTGTTCAGCATTaGTCTAACCACGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQHIVQH*SNHGHH
Trigger: GTGGTGACCGTGGTTAGAGCAATGCTGAACAATGTG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATCACATTGTTCAGCATTaGTCTAACCACGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHHIVQH*SNHGHH
Trigger: GTGGTGACCGTGGTTAGAGCAATGCTGAACAATGTG...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTCACATTGTTCAGCATTaGTCTAACCACGGTCACCAC +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSHIVQH*SNHGHH
Trigger: GTGGTGACCGTGGTTAGAGCAATGCTGAACAATGTG...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCTCCAGCAGTTCCATCTaGTTGTCTCTTGGTCTCACC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSSSSSI*LSLGLT
Trigger: GGTGAGACCAAGAGACAAGCAGATGGAACTGCTGGA...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCTTGATTGGAATGGATaGCTGAGGATAGTAAAACAA +
Preference number: 4 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSILDWNG*LRIVKQ
Trigger: TTGTTTTACTATCCTCAGGCATCCATTCCAATCAAG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTCTTCTGTTTCGGCCATaGTGGGGAAATAACATCGAC +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSLLFRP*WGNNID
Trigger: GTCGATGTTATTTCCCCAGCATGGCCGAAACAGAAG...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACTTCTGTTTCGGCCATaGTGGGGAAATAACATCGAC +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQLLFRP*WGNNID
Trigger: GTCGATGTTATTTCCCCAGCATGGCCGAAACAGAAG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp TTGAAAGACGAACTTATCAGTACTATTAAAAGGATACCAAAGGTTAGTGCAGCAAGGGAAAAGAGCATATaGCTTCCTTACCGCCCCAGC +
Preference number: 4 (lower is better)
Translates to: LKDELISTIKRIPKVSAAREKSI*LPYRPS
Trigger: GCTGGGGCGGTAAGGAAGGCATATGCTCTTTTCCCT...TGCTGCACTAACCTTTGGTATCCTTTTAATAGTACTGATAAGTTCGTCTTTCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR CCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAACCAGCCATTCACCTaGGCGAGATTCTTGCCTATC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSNQPFT*ARFLPI
Trigger: GATAGGCAAGAATCTCGCCCAGGTGAATGGCTGGTT...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATACCATTTCTCCAATGTaGTCATGGCTTGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHTISPM*SWLERA
Trigger: GGCTCTCTCAAGCCATGACCACATTGGAGAAATGGT...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTACCATTTCTCCAATGTaGTCATGGCTTGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSTISPM*SWLERA
Trigger: GGCTCTCTCAAGCCATGACCACATTGGAGAAATGGT...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
3UTR CAA 72 bp CGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTaGAAAGACGAACTTATCAGTACTATTAAAAGGATA +
Preference number: 4 (lower is better)
Translates to: RLQHWGLNSRIT*KDELISTIKRI
Trigger: TATCCTTTTAATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR TCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATATTTATTCTGCATCCTaGAGTCTTCCCGAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHIYSAS*SLPEAS
Trigger: CGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAAT...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTATTTATTCTGCATCCTaGAGTCTTCCCGAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSIYSAS*SLPEAS
Trigger: CGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAAT...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAATTTATTCTGCATCCTaGAGTCTTCCCGAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQIYSAS*SLPEAS
Trigger: CGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAAT...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTAGCACCATCATTTCTTaGTTGGAATGGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSSTIIS*LEWMPE
Trigger: CTCAGGCATCCATTCCAATCAAGAAATGATGGTGCT...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGCACCATCATTTCTTaGTTGGAATGGATGCCTGAG +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQSTIIS*LEWMPE
Trigger: CTCAGGCATCCATTCCAATCAAGAAATGATGGTGCT...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGCCAAAGCTCCCTGAGTaGTCTATATGTATAACCAGG +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVPKLPE*SICITR
Trigger: CCTGGTTATACATATAGATCACTCAGGGAGCTTTGG...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTTTCATGGCTGCTGTaGCTCTGCAGACAAGCATTT +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHFSWLL*LCRQAF
Trigger: AAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAA...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGAGCTTTTGCCAGCTCTaGAGACTTCAGCACATAATC +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVSFCQL*RLQHII
Trigger: GATTATGTGCTGAAGTCTGCAGAGCTGGCAAAAGCT...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR GCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACCTGGGCGAGATTCTTaGCTATCACATAACAGAACT +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQPGRDS*LSHNRT
Trigger: AGTTCTGTTATGTGATAGGCAAGAATCTCGCCCAGG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAACCAGCCATTCACCTaGGCGAGATTCTTGCCTATC +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNNQPFT*ARFLPI
Trigger: GATAGGCAAGAATCTCGCCCAGGTGAATGGCTGGTT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCACCATTTCTCCAATGTaGTCATGGCTTGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSTISPM*SWLERA
Trigger: GGCTCTCTCAAGCCATGACCACATTGGAGAAATGGT...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCATTTATTCTGCATCCTaGAGTCTTCCCGAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSIYSAS*SLPEAS
Trigger: CGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAAT...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp AAATCATGTAAATATTTACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTCAAGAAAAGAATCCTTaGTATTACTGGCCAGCAAAA +
Preference number: 4 (lower is better)
Translates to: KSCKYLRRLQHWGLNSRIQEKNP*YYWPAK
Trigger: TTTTGCTGGCCAGTAATATCAAGGATTCTTTTCTTG...AATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGTAAATATTTACATGATTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR GCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGAAGACGGATTTATTCTaGATCCTGAAGTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVKTDLF*ILKSSR
Trigger: TCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTT...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp TGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCAGTACTATTAAATTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: WGLNSRITLKDELISTIKLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...TTTAATAGTACTGATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR GCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCCTGGGCGAGATTCTTaGCTATCACATAACAGAACT +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSPGRDS*LSHNRT
Trigger: AGTTCTGTTATGTGATAGGCAAGAATCTCGCCCAGG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATACCATTTCTCCAATGTaGTCATGGCTTGAGAGAGCC +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNTISPM*SWLERA
Trigger: GGCTCTCTCAAGCCATGACCACATTGGAGAAATGGT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp CAGCTGATTGTTAACAGCATAAACCAATTAGTTTTACTCAGACATCATGGTTTCATTTATTCTGCATCCTaGAGTCTTCCCGAAGCTTCG +
Preference number: 4 (lower is better)
Translates to: QLIVNSINQLVLLRHHGFIYSAS*SLPEAS
Trigger: CGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAAT...GAAACCATGATGTCTGAGTAAAACTAATTGGTTTATGCTGTTAACAATCAGCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR TCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATCCAAAGCTCCCTGAGTaGTCTATATGTATAACCAGG +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNPKLPE*SICITR
Trigger: CCTGGTTATACATATAGATCACTCAGGGAGCTTTGG...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAG +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNLENRP*SRISFK
Trigger: CTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAA...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAGCTTTTGCCAGCTCTaGAGACTTCAGCACATAATC +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNSFCQL*RLQHII
Trigger: GATTATGTGCTGAAGTCTGCAGAGCTGGCAAAAGCT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGCCATCATTTCTTGATTaGAATGGATGCCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVPSFLD*NGCLRI
Trigger: TATCCTCAGGCATCCATTCCAATCAAGAAATGATGG...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATCCATCATTTCTTGATTaGAATGGATGCCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHPSFLD*NGCLRI
Trigger: TATCCTCAGGCATCCATTCCAATCAAGAAATGATGG...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATTTAATTCTTCAACCTTaGCTTCTACTTCTCCCGCCC +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNLILQP*LLLLPP
Trigger: GGGCGGGAGAAGTAGAAGCCAAGGTTGAAGAATTAA...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000531058.1
CDS-3UTR TCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR TCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGTTTTCCAAAGCTCCCTaGGTGATCTATATGTATAAC +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVFSKAP*VIYMYN
Trigger: GTTATACATATAGATCACTCAGGGAGCTTTGGAAAA...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAAGACGGATTTATTCTaGATCCTGAAGTCTTCCCGA +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNKTDLF*ILKSSR
Trigger: TCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACTTGATTGGAATGGATaGCTGAGGATAGTAAAACAA +
Preference number: 4 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQLDWNG*LRIVKQ
Trigger: TTGTTTTACTATCCTCAGGCATCCATTCCAATCAAG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAGAGCAGAGCTCATTTaGACGGTCATAAGGTTTTCA +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNRAELI*TVIRFS
Trigger: TGAAAACCTTATGACCGTGCAAATGAGCTCTGCTCT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCCATCATTTCTTGATTaGAATGGATGCCTGAGGATA +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSPSFLD*NGCLRI
Trigger: TATCCTCAGGCATCCATTCCAATCAAGAAATGATGG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CCA 90 bp CAGCTGATTGTTAACAGCATAAACCAATTAGTTTTACTCAGACATCATGGTTTCTTTACTCAGACATCATaGTTTCCCTTAGTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: QLIVNSINQLVLLRHHGFFTQTS*FPLVRG
Trigger: TCCCCTGACTAAGGGAAACCATGATGTCTGAGTAAA...GAAACCATGATGTCTGAGTAAAACTAATTGGTTTATGCTGTTAACAATCAGCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530266.5
ENST00000532081.1
CDS-3UTR TCA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAAATTACCGATTTGGTaGTGGGTGTTAAGGTTGACA +
Preference number: 4 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNKLPIW*WVLRLT
Trigger: TGTCAACCTTAACACCCATCACCAAATCGGTAATTT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCTTGATTGGAATGGATaGCTGAGGATAGTAAAACAA +
Preference number: 4 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSLDWNG*LRIVKQ
Trigger: TTGTTTTACTATCCTCAGGCATCCATTCCAATCAAG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR GCA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGAATTACAGATTATTGTaGCCACACCCCAGAAATTTT +
Preference number: 4 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVNYRLL*PHPRNF
Trigger: AAAATTTCTGGGGTGTGGGCACAATAATCTGTAATT...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS GCA 90 bp CAGCAGACCCATCGGAAGGGGCCCGAGCTGGAGGGTGCGCCCAGGTaGCACAAGCTGCTGGCATCACTGGGCATACCCCACGGTATCCCC +
Preference number: 5 (lower is better)
Translates to: QQTHRKGPELEGAPR*HKLLASLGIPHGIP
Trigger: GGGGATACCGTGGGGTATGCCCAGTGATGCCAGCAGCTTGTGGCACCTGGGCGCACCCTCCAGCTCGGGCCCCTTCCGATGGGTCTGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS GCA 90 bp GCACCTGAGCCAGCAGACCCATCGGAAGGGGCCCGAGCTGGAGGGTaGGCCCAGGTGCCACAAGCTGCTGGCATCACTGGGCATACCCCA +
Preference number: 5 (lower is better)
Translates to: APEPADPSEGARAGG*AQVPQAAGITGHTP
Trigger: TGGGGTATGCCCAGTGATGCCAGCAGCTTGTGGCACCTGGGCGCACCCTCCAGCTCGGGCCCCTTCCGATGGGTCTGCTGGCTCAGGTGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CAA 90 bp ACGACGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTTCGGCCATGCCGGCTaGGTCTTCCGGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: TTSPALGPELKDYFERRTFGHAG*VFRVAS
Trigger: CGAGGCCACCCGGAAGACCAAGCCGGCATGGCCGAA...AGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACGTCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000530266.5
CDS-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCAGCGCCTACCCGGCTaGGTCTTCCGGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIQRLPG*VFRVAS
Trigger: CGAGGCCACCCGGAAGACCAAGCCGGGTAGGCGCTG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS GCA 90 bp GTGAGCTTCCTCCGGCCAATGAGCGTGACTTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAGAGCACTCTGCCGGTTTCTCCGCTG +
Preference number: 5 (lower is better)
Translates to: VSFLRPMSVTLENRP*SRISFKSTLPVSPL
Trigger: CAGCGGAGAAACCGGCAGAGTGCTCTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAAAGTCACGCTCATTGGCCGGAGGAAGCTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000530266.5
ENST00000531058.1
ENST00000532081.1
ENST00000532505.1
CDS GCA 90 bp CAGTTCCATCTGCTTGTCTCTTGGTCTCACCACATTGTTCAGCATTaGTCTAACCACGGTCACCACAGGCACAGAATGCCCACTGGCCCA +
Preference number: 5 (lower is better)
Translates to: QFHLLVSWSHHIVQH*SNHGHHRHRMPTGP
Trigger: TGGGCCAGTGGGCATTCTGTGCCTGTGGTGACCGTGGTTAGAGCAATGCTGAACAATGTGGTGAGACCAAGAGACAAGCAGATGGAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS GCA 90 bp GGGGAAATAACATCGACAGATGCCGGTCTTAGGGTGTCAGGGGACTaGCAGTCCTTATCCCGAGGAACAAGGGCTGTTTATCTGTTAGGG +
Preference number: 5 (lower is better)
Translates to: GEITSTDAGLRVSGD*QSLSRGTRAVYLLG
Trigger: CCCTAACAGATAAACAGCCCTTGTTCCTCGGGATAAGGACTGGCAGTCCCCTGACACCCTAAGACCGGCATCTGTCGATGTTATTTCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000451739.7
ENST00000532081.1
CDS GCA 90 bp CTGCCGGTTTCTCCGCTGGCGCCCAAAATAAAGACGGATTTATTCTaGATCCTGAAGTCTTCCCGAAGCTTCGACAGGGCTTCTGTTTCG +
Preference number: 5 (lower is better)
Translates to: LPVSPLAPKIKTDLF*ILKSSRSFDRASVS
Trigger: CGAAACAGAAGCCCTGTCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTTTGGGCGCCAGCGGAGAAACCGGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000530266.5
ENST00000531058.1
ENST00000532081.1
ENST00000532505.1
CDS CCA 90 bp GGAAAAGAGCATATGCCTTCCTTACCGCCCCAGCTTTCCCTCTGGTaGTACCCAGGCAACAGAATCCAACATCATGACCTTGAAAGGCAG +
Preference number: 5 (lower is better)
Translates to: GKEHMPSLPPQLSLW*YPGNRIQHHDLERQ
Trigger: CTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAGGGAAAGCTGGGGCGGTAAGGAAGGCATATGCTCTTTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS-3UTR CAA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGAGGTCATGGATGGCCTaGTTCTCCAGCAGTTCCATC +
Preference number: 5 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQRSWMA*FSSSSI
Trigger: GATGGAACTGCTGGAGAACAAGGCCATCCATGACCT...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCGGCCATGCCGGCTaGGTCTTCCGGGTGGCCTCG +
Preference number: 5 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHFGHAG*VFRVAS
Trigger: CGAGGCCACCCGGAAGACCAAGCCGGCATGGCCGAA...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000421577.6
CDS GCA 90 bp ACATTGTTCAGCATTGCTCTAACCACGGTCACCACAGGCACAGAATaGCCACTGGCCCAAGAGTCTGGTAAGGAGCCAAAGAACTTTCTA +
Preference number: 5 (lower is better)
Translates to: TLFSIALTTVTTGTE*PLAQESGKEPKNFL
Trigger: TAGAAAGTTCTTTGGCTCCTTACCAGACTCTTGGGCCAGTGGGCATTCTGTGCCTGTGGTGACCGTGGTTAGAGCAATGCTGAACAATGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTGCACCCTCCAGCTTTaGCCAGCTCTGCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSICTLQL*PALQTS
Trigger: TGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGCA...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000419348.6
ENST00000451739.7
CDS-3UTR CAA 90 bp CGTCTCCAGCACTGGGGCCTGAACTCAAGGATTACTTTGAAAGACGAACTTATCTCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTC +
Preference number: 5 (lower is better)
Translates to: RLQHWGLNSRITLKDELISNIMT*KGRGVV
Trigger: GACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGA...GATAAGTTCGTCTTTCAAAGTAATCCTTGAGTTCAGGCCCCAGTGCTGGAGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS CCA 90 bp TGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGGTCATaGCTTGAGAGAGCCATGCGCTTTCCCCAGGTCATGGATGGCCTT +
Preference number: 5 (lower is better)
Translates to: WVLRLTIKTISPMWS*LERAMRFPQVMDGL
Trigger: AAGGCCATCCATGACCTGGGGAAAGCGCATGGCTCTCTCAAGCCATGACCACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS-3UTR CAA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCAAGTTGAAATGTTaGCACCCTCCAGCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTSKLKC*HPPAFA
Trigger: GGCAAAAGCTGGAGGGTGCAAACATTTCAACTTGCT...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419348.6
ENST00000451739.7
CDS-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTAGCAGTTCCATCTGCTaGTCTCTTGGTCTCACCACA +
Preference number: 5 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSISSSIC*SLGLTT
Trigger: TGTGGTGAGACCAAGAGACAAGCAGATGGAACTGCT...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp AGCAGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGTTTAATTCTTCAACCTaGGCTTCTACTTCTCCCGCC +
Preference number: 5 (lower is better)
Translates to: SRAHLHGHKVFMAAVTLQFNSST*ASTSPA
Trigger: GGCGGGAGAAGTAGAAGCCAAGGTTGAAGAATTAAA...CTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000531058.1
CDS TCA 90 bp GTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGGTCATGGCTTaGGAGAGCCATGCGCTTTCCCCAGGTCATGGATGGCCTTGTTCT +
Preference number: 5 (lower is better)
Translates to: VKVDNKNHFSNVVMA*ESHALSPGHGWPCS
Trigger: AGAACAAGGCCATCCATGACCTGGGGAAAGCGCATGGCTCTCTCAAGCCATGACCACATTGGAGAAATGGTTTTTATTGTCAACCTTAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCCATCTGCTTGTCTCTaGGTCTCACCACATTGTTCA +
Preference number: 5 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIPSACL*VSPHCS
Trigger: TGAACAATGTGGTGAGACCAAGAGACAAGCAGATGG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCCATCTGCTTGTCTCTaGGTCTCACCACATTGTTCA +
Preference number: 5 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQPSACL*VSPHCS
Trigger: TGAACAATGTGGTGAGACCAAGAGACAAGCAGATGG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTGCACCCTCCAGCTTTaGCCAGCTCTGCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHCTLQL*PALQTS
Trigger: TGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGCA...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGTGCACCCTCCAGCTTTaGCCAGCTCTGCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVCTLQL*PALQTS
Trigger: TGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGCA...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAATGCACCCTCCAGCTTTaGCCAGCTCTGCAGACTTCA +
Preference number: 5 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQCTLQL*PALQTS
Trigger: TGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGCA...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTTTAGGGAGGAGGATATaGTTCTCCGCAGTCCGGGCT +
Preference number: 5 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSLGRRI*FSAVRA
Trigger: AGCCCGGACTGCGGAGAACAATATCCTCCTCCCTAA...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTTAGAGGATAGCAAGTaGAAATGTTTGCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSILEDSK*KCLHPP
Trigger: TGGAGGGTGCAAACATTTCAACTTGCTATCCTCTAA...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000419348.6
ENST00000451739.7
CDS-3UTR CAA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGAGGTCATGGATGGCCTaGTTCTCCAGCAGTTCCATC +
Preference number: 5 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVRSWMA*FSSSSI
Trigger: GATGGAACTGCTGGAGAACAAGGCCATCCATGACCT...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTCAATGTGGTCATGGCTaGAGAGAGCCATGCGCTTTC +
Preference number: 5 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSQCGHG*REPCAF
Trigger: GAAAGCGCATGGCTCTCTCAAGCCATGACCACATTG...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGCCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp CATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTCCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: HLHGHKVFMAAVTLQTSIPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...AATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp AGAGCTCATTTGCACGGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAGAAAATTACAGATTATaGTGCCCACACCCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: RAHLHGHKVFMAAVTLQTENYRL*CPHPRN
Trigger: ATTTCTGGGGTGTGGGCACAATAATCTGTAATTTTC...TGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACCGTGCAAATGAGCTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAATCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTC +
Preference number: 5 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQSNIMT*KGRGVV
Trigger: GACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGA...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTC +
Preference number: 5 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHSNIMT*KGRGVV
Trigger: GACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGA...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGTTCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTC +
Preference number: 5 (lower is better)
Translates to: APSFLDWNGCLRIVKQQSSNIMT*KGRGVV
Trigger: GACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGA...ACTTTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAAAGCAGTTCCATCTGCTaGTCTCTTGGTCTCACCACA +
Preference number: 5 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQSSSIC*SLGLTT
Trigger: TGTGGTGAGACCAAGAGACAAGCAGATGGAACTGCT...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCAATGTGGTCATGGCTaGAGAGAGCCATGCGCTTTC +
Preference number: 5 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSQCGHG*REPCAF
Trigger: GAAAGCGCATGGCTCTCTCAAGCCATGACCACATTG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GGTCATAAGGTTTTCATGGCTGCTGTGACTCTGCAGACAAGCATTTCAAAGCAGGAAAATTACAGATTATaGTGCCCACACCCCAGAAAT +
Preference number: 5 (lower is better)
Translates to: GHKVFMAAVTLQTSISKQENYRL*CPHPRN
Trigger: ATTTCTGGGGTGTGGGCACAATAATCTGTAATTTTC...CTGCTTTGAAATGCTTGTCTGCAGAGTCACAGCAGCCATGAAAACCTTATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000419348.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCTCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTC +
Preference number: 5 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSSNIMT*KGRGVV
Trigger: GACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGA...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GACCCTGAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATAGCAAGTTGAAATGTTaGCACCCTCCAGCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: DPEITDLVMGVKVDNKNHSKLKC*HPPAFA
Trigger: GGCAAAAGCTGGAGGGTGCAAACATTTCAACTTGCT...ATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTCAGGGTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACTTGGTCTCACCACATaGTTCAGCATTGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQLGLTT*FSIALT
Trigger: GGTTAGAGCAATGCTGAACAATGTGGTGAGACCAAG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGCTTGGTCTCACCACATaGTTCAGCATTGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVLGLTT*FSIALT
Trigger: GGTTAGAGCAATGCTGAACAATGTGGTGAGACCAAG...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp AGAGCACCATCATTTCTTGATTGGAATGGATGCCTGAGGATAGTAAAACAACAACCATCTGCTTGTCTCTaGGTCTCACCACATTGTTCA +
Preference number: 5 (lower is better)
Translates to: RAPSFLDWNGCLRIVKQQPSACL*VSPHCS
Trigger: TGAACAATGTGGTGAGACCAAGAGACAAGCAGATGG...TTGTTGTTTTACTATCCTCAGGCATCCATTCCAATCAAGAAATGATGGTGCTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAGGTCATGGATGGCCTaGTTCTCCAGCAGTTCCATC +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNRSWMA*FSSSSI
Trigger: GATGGAACTGCTGGAGAACAAGGCCATCCATGACCT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATCAATGTGGTCATGGCTaGAGAGAGCCATGCGCTTTC +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNQCGHG*REPCAF
Trigger: GAAAGCGCATGGCTCTCTCAAGCCATGACCACATTG...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCCATCTGCTTGTCTCTaGGTCTCACCACATTGTTCA +
Preference number: 5 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSPSACL*VSPHCS
Trigger: TGAACAATGTGGTGAGACCAAGAGACAAGCAGATGG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAGCAGTTCCATCTGCTaGTCTCTTGGTCTCACCACA +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNSSSIC*SLGLTT
Trigger: TGTGGTGAGACCAAGAGACAAGCAGATGGAACTGCT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATAGCAAGTTGAAATGTTaGCACCCTCCAGCTTTTGCC +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNSKLKC*HPPAFA
Trigger: GGCAAAAGCTGGAGGGTGCAAACATTTCAACTTGCT...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGTTAGAGGATAGCAAGTaGAAATGTTTGCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVLEDSK*KCLHPP
Trigger: TGGAGGGTGCAAACATTTCAACTTGCTATCCTCTAA...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATCTTGGTCTCACCACATaGTTCAGCATTGCTCTAACC +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNLGLTT*FSIALT
Trigger: GGTTAGAGCAATGCTGAACAATGTGGTGAGACCAAG...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATCCATCTGCTTGTCTCTaGGTCTCACCACATTGTTCA +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNPSACL*VSPHCS
Trigger: TGAACAATGTGGTGAGACCAAGAGACAAGCAGATGG...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATGTGCCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: TDLVMGVKVDNKNHFSNVPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...CACATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCTTAGAGGATAGCAAGTaGAAATGTTTGCACCCTCCA +
Preference number: 5 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSLEDSK*KCLHPP
Trigger: TGGAGGGTGCAAACATTTCAACTTGCTATCCTCTAA...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS-3UTR CAA 90 bp GAAATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCCCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: EITDLVMGVKVDNKNHFSPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...GGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAATTTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS-3UTR CAA 90 bp ATTACCGATTTGGTGATGGGTGTTAAGGTTGACAATAAAAACCATTTCTCCAATCCTGAAATTACCGATTaGGTGATGGGTGTTAAGGTT +
Preference number: 5 (lower is better)
Translates to: ITDLVMGVKVDNKNHFSNPEITD*VMGVKV
Trigger: AACCTTAACACCCATCACCAAATCGGTAATTTCAGG...ATTGGAGAAATGGTTTTTATTGTCAACCTTAACACCCATCACCAAATCGGTAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
CDS GCA 72 bp CCAGCAGACCCATCGGAAGGGGCCCGAGCTGGAGGGTaGGCCCAGGTGCCACAAGCTGCTGGCATCACTGGG +
Preference number: 6 (lower is better)
Translates to: PADPSEGARAGG*AQVPQAAGITG
Trigger: CCCAGTGATGCCAGCAGCTTGTGGCACCTGGGCGCACCCTCCAGCTCGGGCCCCTTCCGATGGGTCTGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS CCA 72 bp AGGGTGCGCCCAGGTGCCACAAGCTGCTGGCATCACTaGGCATACCCCACGGTATCCCCGGCCCGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: RVRPGATSCWHH*AYPTVSPARPG
Trigger: TCCTGGCCGGGCCGGGGATACCGTGGGGTATGCCCAGTGATGCCAGCAGCTTGTGGCACCTGGGCGCACCCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS GCA 72 bp CATCGGAAGGGGCCCGAGCTGGAGGGTGCGCCCAGGTaGCACAAGCTGCTGGCATCACTGGGCATACCCCAC +
Preference number: 6 (lower is better)
Translates to: HRKGPELEGAPR*HKLLASLGIPH
Trigger: GTGGGGTATGCCCAGTGATGCCAGCAGCTTGTGGCACCTGGGCGCACCCTCCAGCTCGGGCCCCTTCCGATG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS GCA 72 bp AGCATTGCTCTAACCACGGTCACCACAGGCACAGAATaGCCACTGGCCCAAGAGTCTGGTAAGGAGCCAAAG +
Preference number: 6 (lower is better)
Translates to: SIALTTVTTGTE*PLAQESGKEPK
Trigger: CTTTGGCTCCTTACCAGACTCTTGGGCCAGTGGGCATTCTGTGCCTGTGGTGACCGTGGTTAGAGCAATGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS GCA 72 bp CTCCGGCCAATGAGCGTGACTTTGGAAAACAGGCCCTaGTCCAGGATTTCCTTTAAGAGCACTCTGCCGGTT +
Preference number: 6 (lower is better)
Translates to: LRPMSVTLENRP*SRISFKSTLPV
Trigger: AACCGGCAGAGTGCTCTTAAAGGAAATCCTGGAGCAGGGCCTGTTTTCCAAAGTCACGCTCATTGGCCGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000530266.5
ENST00000531058.1
ENST00000532081.1
ENST00000532505.1
CDS GCA 72 bp ACATCGACAGATGCCGGTCTTAGGGTGTCAGGGGACTaGCAGTCCTTATCCCGAGGAACAAGGGCTGTTTAT +
Preference number: 6 (lower is better)
Translates to: TSTDAGLRVSGD*QSLSRGTRAVY
Trigger: ATAAACAGCCCTTGTTCCTCGGGATAAGGACTGGCAGTCCCCTGACACCCTAAGACCGGCATCTGTCGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000451739.7
ENST00000532081.1
CDS CCA 72 bp CACGAACAAATCCCTCCGCCCCAGCTTTCCCTCTGGTaGTACCCAGGCAACAGAATCCAACATCATGACCTT +
Preference number: 6 (lower is better)
Translates to: HEQIPPPQLSLW*YPGNRIQHHDL
Trigger: AAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAGGGAAAGCTGGGGCGGAGGGATTTGTTCGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
CDS CAA 72 bp GGAACAAGGGCTGTTTATCTGTTAGGGAGGAGGATATaGTTCTCCGCAGTCCGGGCTCTGGGGAAAGTGCTG +
Preference number: 6 (lower is better)
Translates to: GTRAVYLLGRRI*FSAVRALGKVL
Trigger: CAGCACTTTCCCCAGAGCCCGGACTGCGGAGAACAATATCCTCCTCCCTAACAGATAAACAGCCCTTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS CAA 90 bp TTATCCCGAGGAACAAGGGCTGTTTATCTGTTAGGGAGGAGGATATaGTTCTCCGCAGTCCGGGCTCTGGGGAAAGTGCTGAGTCACGTG +
Preference number: 6 (lower is better)
Translates to: LSRGTRAVYLLGRRI*FSAVRALGKVLSHV
Trigger: CACGTGACTCAGCACTTTCCCCAGAGCCCGGACTGCGGAGAACAATATCCTCCTCCCTAACAGATAAACAGCCCTTGTTCCTCGGGATAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000451739.7
CDS CCA 72 bp CATATGCCTTCCTTACCGCCCCAGCTTTCCCTCTGGTaGTACCCAGGCAACAGAATCCAACATCATGACCTT +
Preference number: 6 (lower is better)
Translates to: HMPSLPPQLSLW*YPGNRIQHHDL
Trigger: AAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAGGGAAAGCTGGGGCGGTAAGGAAGGCATATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000530266.5
ENST00000532081.1
ENST00000532505.1
CDS GCA 72 bp TCTCCGCTGGCGCCCAAAATAAAGACGGATTTATTCTaGATCCTGAAGTCTTCCCGAAGCTTCGACAGGGCT +
Preference number: 6 (lower is better)
Translates to: SPLAPKIKTDLF*ILKSSRSFDRA
Trigger: AGCCCTGTCGAAGCTTCGGGAAGACTTCAGGATGCAGAATAAATCCGTCTTTATTTTGGGCGCCAGCGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000530266.5
ENST00000531058.1
ENST00000532081.1
ENST00000532505.1
CDS CAA 90 bp TTTCCCTCTGGTGGTACCCAGGCAACAGAATCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTCATCCAACTTTTCAAAGTCCACCAC +
Preference number: 6 (lower is better)
Translates to: FPSGGTQATESNIMT*KGRGVVIQLFKVHH
Trigger: GTGGTGGACTTTGAAAAGTTGGATGACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACCAGAGGGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000530266.5
ENST00000531058.1
ENST00000532081.1
ENST00000532505.1
CDS GCA 72 bp GTTGAAATGTTTGCACCCTCCAGCTTTTGCCAGCTCTaGAGACTTCAGCACATAATCTCGGTCAACACGAAC +
Preference number: 6 (lower is better)
Translates to: VEMFAPSSFCQL*RLQHIISVNTN
Trigger: GTTCGTGTTGACCGAGATTATGTGCTGAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGCAAACATTTCAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000533914.1
CDS GCA 72 bp AGGTCATGGATGGCCTTGTTCTCCAGCAGTTCCATCTaGTTGTCTCTTGGTCTCACCACATTGTTCAGCATT +
Preference number: 6 (lower is better)
Translates to: RSWMALFSSSSI*LSLGLTTLFSI
Trigger: AATGCTGAACAATGTGGTGAGACCAAGAGACAAGCAGATGGAACTGCTGGAGAACAAGGCCATCCATGACCT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS CAA 72 bp TCATGGATGGCCTTGTTCTCCAGCAGTTCCATCTGCTaGTCTCTTGGTCTCACCACATTGTTCAGCATTGCT +
Preference number: 6 (lower is better)
Translates to: SWMALFSSSSIC*SLGLTTLFSIA
Trigger: AGCAATGCTGAACAATGTGGTGAGACCAAGAGACAAGCAGATGGAACTGCTGGAGAACAAGGCCATCCATGA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000531058.1
ENST00000533914.1
CDS CAA 72 bp GGTGGTACCCAGGCAACAGAATCCAACATCATGACCTaGAAAGGCAGAGGCGTAGTCATCCAACTTTTCAAA +
Preference number: 6 (lower is better)
Translates to: GGTQATESNIMT*KGRGVVIQLFK
Trigger: TTTGAAAAGTTGGATGACTACGCCTCTGCCTTTCAAGGTCATGATGTTGGATTCTGTTGCCTGGGTACCACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000530266.5
ENST00000531058.1
ENST00000532081.1
ENST00000532505.1
CDS CAA 72 bp TTATCAGCTCCTTTAGAGGATAGCAAGTTGAAATGTTaGCACCCTCCAGCTTTTGCCAGCTCTGCAGACTTC +
Preference number: 6 (lower is better)
Translates to: LSAPLEDSKLKC*HPPAFASSADF
Trigger: GAAGTCTGCAGAGCTGGCAAAAGCTGGAGGGTGCAAACATTTCAACTTGCTATCCTCTAAAGGAGCTGATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000419348.6
ENST00000421577.6
ENST00000443524.6
ENST00000451739.7
ENST00000533914.1
CDS CAA 90 bp ACTCCCCAGGCACTAAGAGAACAAAGTCTATTTAATTCCCAATTTTaGTGTATGCTCTACAATGTACCTCACACATTAGTAAAGAATGCA +
Preference number: 6 (lower is better)
Translates to: TPQALREQSLFNSQF*CMLYNVPHTLVKNA
Trigger: TGCATTCTTTACTAATGTGTGAGGTACATTGTAGAGCATACACAAAAATTGGGAATTAAATAGACTTTGTTCTCTTAGTGCCTGGGGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000533914.1