RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSPH1 (Homo sapiens)

Ensembl gene IDs: ENSG00000120694

Ensembl transcript IDs: ENST00000320027.10, ENST00000380405.7, ENST00000435381.5, ENST00000445273.6, ENST00000602786.5, ENST00000626866.2, ENST00000629751.1, ENST00000630972.2

Found 481 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCCCGCATCCAAAAGCGCAGTACACTGATTTAGGCCAGACTGACTaGTGCTCCCTCCCGTCATCAGGTTCTATTTTAGGACAGGAGGAA +
Preference number: 1 (lower is better)
Translates to: CPHPKAQYTDLGQTD*CSLPSSGSILGQEE
Trigger: TTCCTCCTGTCCTAAAATAGAACCTGATGACGGGAGGGAGCATCAGTCAGTCTGGCCTAAATCAGTGTACTGCGCTTTTGGATGCGGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
3UTR GCA 90 bp AAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTaGATGTGTCTTCTCCCCTACCTCCAACACTACTTCAATTTTGTG +
Preference number: 1 (lower is better)
Translates to: KLLHPSEELVVTYPK*MCLLPYLQHYFNFV
Trigger: CACAAAATTGAAGTAGTGTTGGAGGTAGGGGAGAAGACACATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
3UTR GCA 90 bp AGAAGACATTTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATaGCGTAGAGATGGTGAAAATGCCATGGGTGTTGACTCGCACTTT +
Preference number: 1 (lower is better)
Translates to: RRHFILLSWDFLHHR*RRDGENAMGVDSHF
Trigger: AAAGTGCGAGTCAACACCCATGGCATTTTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAAATGTCTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR GCA 90 bp TTACCCTCTGTCTCAATATACATGTTAAGAAGGTCTTTCCCTAACTaGCAGACCAAGTTGGCTTCAATAGGCAGCTCAACATTCACCACC +
Preference number: 1 (lower is better)
Translates to: LPSVSIYMLRRSFPN*QTKLASIGSSTFTT
Trigger: GGTGGTGAATGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTGAGACAGAGGGTAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR TCA 90 bp AACTGCACTCACATCTTCTACTTTGAGATGAGTTTGTTCCAACAGTaGATAAAGGGGTACTTCTATCTTTTGCAGAAGTTCAGCACAGAG +
Preference number: 1 (lower is better)
Translates to: NCTHIFYFEMSLFQQ*IKGYFYLLQKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCCCTTTATTCACTGTTGGAACAAACTCATCTCAAAGTAGAAGATGTGAGTGCAGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR CCA 90 bp CTTCCTTTTTATCAATATTTGGGCCATTTGGAGTTCTTTCCAGTTTaGGTGATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCAC +
Preference number: 1 (lower is better)
Translates to: LPFYQYLGHLEFFPV*VIQFLVSVVLQRVH
Trigger: GTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAATCACCCAAACTGGAAAGAACTCCAAATGGCCCAAATATTGATAAAAAGGAAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR TCA 90 bp TTCCCTAACTGCCAGACCAAGTTGGCTTCAATAGGCAGCTCAACATTCACCACCTGTGCAGAAACATTCTaGACTACAAAGCGGCCTATT +
Preference number: 2 (lower is better)
Translates to: FPNCQTKLASIGSSTFTTCAETF*TTKRPI
Trigger: AATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCACA...GGTGGTGAATGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CCA 90 bp ATAGGCAGCTCAACATTCACCACCTTTATTTTGGGCTTTTTAGCTTCTGGAGGCGTCTGGGTTTTCTGGTaGTCTCTGATTCAGACACTC +
Preference number: 2 (lower is better)
Translates to: IGSSTFTTFILGFLASGGVWVFW*SLIQTL
Trigger: GAGTGTCTGAATCAGAGACCACCAGAAAACCCAGAC...GCCTCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAATGTTGAGCTGCCTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAATTTTGCTTCTGGATATaGAACTCCTTGGGGATCAGA +
Preference number: 2 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEFCFWI*NSLGIR
Trigger: TCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAA...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAATTTCTCATCCAGGCTTaGGAGATCCTGCTTATAAAT +
Preference number: 2 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEFLIQA*EILLIN
Trigger: ATTTATAAGCAGGATCTCCCAAGCCTGGATGAGAAA...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAAGGAGTGCTCGTATTTTaGATTTTGCATCCAACTTGT +
Preference number: 2 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEGVLVF*ILHPTC
Trigger: ACAAGTTGGATGCAAAATCCAAAATACGAGCACTCC...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR CAA 90 bp TCAATATACATGTTAAGAAGGTCTTTCCCTAACTGCCAGACCAAGTaGGCTTCAATAGGCAGCTCAACATTCACCACCTTTATTTTGGGC +
Preference number: 2 (lower is better)
Translates to: SIYMLRRSFPNCQTK*ASIGSSTFTTFILG
Trigger: GCCCAAAATAAAGGTGGTGAATGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 2 (lower is better)
Translates to: DISSIPHFHMTIYCIVREHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGACACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 2 (lower is better)
Translates to: RHFFHSTLSHDNILYSERHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGCACAAGCAGACACTTaGAAAGCTGAATGTCCCATA +
Preference number: 2 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNAQADT*KAECPI
Trigger: TATGGGACATTCAGCTTTTCAAGTGTCTGCTTGTGC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR TCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAATTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCA +
Preference number: 2 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKFSGGL*FRHSMS
Trigger: TGACATGGAGTGTCTGAATCAGAGACCACCAGAAAA...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR GCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAAACATCCTCTGGCTACTaGTTCATCTGCATTGAGTGT +
Preference number: 2 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKTSSGY*FICIEC
Trigger: ACACTCAATGCAGATGAAGCAGTAGCCAGAGGATGT...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR TCA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAAAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 2 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIENSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR TCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAAAGTTTTTCACATTCCTaGTACAGACGTAGGAGTGCT +
Preference number: 2 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKSFSHS*YRRRSA
Trigger: AGCACTCCTACGTCTGTATCAGGAATGTGAAAAACT...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR GCA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAATTCTCTAACTTTAAATaGCGGGGAAAGTATTGCACA +
Preference number: 2 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIEFSNFK*RGKYCT
Trigger: TGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAA...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR GCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAAAAAGCGGCCTATTTTTaGTTCTGGATATGGAACTCC +
Preference number: 2 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKKAAYF*FWIWNS
Trigger: GGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR CAA 90 bp TATTTGGGCCATTTGGAGTTCTTTCCAGTTTGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATT +
Preference number: 2 (lower is better)
Translates to: YLGHLEFFPVWVIQF*VSVVLQRVHMCCSI
Trigger: AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAATCACCCAAACTGGAAAGAACTCCAAATGGCCCAAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR CAA 90 bp TCTTCCTTTTTATCAATATTTGGGCCATTTGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCA +
Preference number: 2 (lower is better)
Translates to: SSFLSIFGPFGVLSS*GDSIFGFGCVTTGS
Trigger: TGAACCCGTTGTAACACAACCGAAACCAAAAATTGAATCACCCAAACTGGAAAGAACTCCAAATGGCCCAAATATTGATAAAAAGGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR GCA 90 bp ATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATTGGCTACTGCTTCATCTaGATTGAGTGTTGTGCTAAT +
Preference number: 2 (lower is better)
Translates to: IQFLVSVVLQRVHMCCSIGYCFI*IECCAN
Trigger: ATTAGCACAACACTCAATGCAGATGAAGCAGTAGCC...AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CCA 90 bp ATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATTTTCATTCTCCTCAGTTaGGACTTTCTCCACCATAGA +
Preference number: 2 (lower is better)
Translates to: IQFLVSVVLQRVHMCCSIFILLS*DFLHHR
Trigger: TCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA...AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 2 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSNSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAACAGAAAGCTTAGTATaGATTCACAATTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: RHFFHSTLSHDNILYSERTESLV*IHNSTG
Trigger: TCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 2 (lower is better)
Translates to: FFHSTLSHDNILYSERESNSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAACAGAAAGCTTAGTATaGATTCACAATTCCACAGGA +
Preference number: 2 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRTESLV*IHNSTG
Trigger: TCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR CCA 90 bp ATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATTTCACTGTTGTCTTGCTaGACATTTTTATCAGTGTCT +
Preference number: 2 (lower is better)
Translates to: IQFLVSVVLQRVHMCCSISLLSC*TFLSVS
Trigger: AGACACTGATAAAAATGTCCAGCAAGACAACAGTGA...AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR GCA 72 bp CACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTaGATGTGTCTTCTCCCCTACCTCCAACACTACTTC +
Preference number: 3 (lower is better)
Translates to: HPSEELVVTYPK*MCLLPYLQHYF
Trigger: GAAGTAGTGTTGGAGGTAGGGGAGAAGACACATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
3UTR-3UTR CAA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGGGGTACTTCTATCTTTaGCAGAAGTTCAGCACAGAG +
Preference number: 3 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGGYFYL*QKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCC...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
49% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR TCA 72 bp CCAAAAGCGCAGTACACTGATTTAGGCCAGACTGACTaGTGCTCCCTCCCGTCATCAGGTTCTATTTTAGGA +
Preference number: 3 (lower is better)
Translates to: PKAQYTDLGQTD*CSLPSSGSILG
Trigger: TCCTAAAATAGAACCTGATGACGGGAGGGAGCATCAGTCAGTCTGGCCTAAATCAGTGTACTGCGCTTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
3UTR GCA 72 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATaGCGTAGAGATGGTGAAAATGCCATGGGTGTTGAC +
Preference number: 3 (lower is better)
Translates to: FILLSWDFLHHR*RRDGENAMGVD
Trigger: GTCAACACCCATGGCATTTTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR GCA 72 bp GTCTCAATATACATGTTAAGAAGGTCTTTCCCTAACTaGCAGACCAAGTTGGCTTCAATAGGCAGCTCAACA +
Preference number: 3 (lower is better)
Translates to: VSIYMLRRSFPN*QTKLASIGSST
Trigger: TGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTGAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR TCA 72 bp AACCTCAGCAGTCAAGTGTTACTAAACCTCATAGTTTaGAGATATTACTCCGTGATGTGTGGAGCACAGAGT +
Preference number: 3 (lower is better)
Translates to: NLSSQVLLNLIV*RYYSVMCGAQS
Trigger: ACTCTGTGCTCCACACATCACGGAGTAATATCTTCAAACTATGAGGTTTAGTAACACTTGACTGCTGAGGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
3UTR-3UTR CAA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAATGGATATGGAACTCCTaGGGGATCAGAATAGAAAGC +
Preference number: 3 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKWIWNS*GIRIES
Trigger: GCTTTCTATTCTGATCCCCAAGGAGTTCCATATCCA...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR TCA 72 bp CTCCAACAATCTCAACTGCACTCACATCTTCTACTTTaGGATGAGTTTGTTCCAACAGTGAATAAAGGGGTA +
Preference number: 3 (lower is better)
Translates to: LQQSQLHSHLLL*DEFVPTVNKGV
Trigger: TACCCCTTTATTCACTGTTGGAACAAACTCATCTCAAAGTAGAAGATGTGAGTGCAGTTGAGATTGTTGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CAA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAATTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 3 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKLITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAGGAGTGCTCGTATTTaGGATTTTGCATCCAACTTG +
Preference number: 3 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSRSARI*DFASNL
Trigger: CAAGTTGGATGCAAAATCCAAAATACGAGCACTCCT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CAA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAAAATTTTTGGTTTCGGTaGTGTTACAACGGGTTCACA +
Preference number: 3 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKNFWFR*CYNGFT
Trigger: TGTGAACCCGTTGTAACACAACCGAAACCAAAAATT...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 3 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSLITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR TCA 72 bp CACATCTTCTACTTTGAGATGAGTTTGTTCCAACAGTaGATAAAGGGGTACTTCTATCTTTTGCAGAAGTTC +
Preference number: 3 (lower is better)
Translates to: HIFYFEMSLFQQ*IKGYFYLLQKF
Trigger: GAACTTCTGCAAAAGATAGAAGTACCCCTTTATTCACTGTTGGAACAAACTCATCTCAAAGTAGAAGATGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602786.5
3UTR-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 3 (lower is better)
Translates to: NRIDISSIPHFHMTIYCILITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 3 (lower is better)
Translates to: RHFFHSTLSHDNILYSERKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 3 (lower is better)
Translates to: FFHSTLSHDNILYSERESKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGCCTCGGGTCTCGGTCTaGGTCCTCCGGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGPRVSV*VLRPPA
Trigger: GGCAGGGGGCCGGAGGACGCAGACCGAGACCCGAGG...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGGCACCTCGGGTTGCCTaGCTCACTCTGCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMAPRVA*LTLPRL
Trigger: GAGCCGCGGCAGAGTGAGGCAGGCAACCCGAGGTGC...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320027.10
CDS-3UTR GCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGCCTGCCGCCGCTTTCTaGCCTGGCCGCGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMPAAAF*PGRVLL
Trigger: GAGCAGAACGCGGCCAGGGCAGAAAGCGGCGGCAGG...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000320027.10
CDS-3UTR GCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGCGTCCTCCGGCCCCCTaGCTGCTTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKRPPAP*LLLLPP
Trigger: CGGCGGCAGGAGAAGCAGGCAGGGGGCCGGAGGACG...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATAGGCAGCTCAACATTCACCACCTTTATTTTGGGCTTTTTAGCTTCTGGAGGCCTCCGCACCTCGGGTTaGCTGCCTCACTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: IGSSTFTTFILGFLASGGLRTSG*LPHSAA
Trigger: CGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAG...GCCTCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAATGTTGAGCTGCCTAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAACACCGGCGCCGGCGCTaGACTACCGACCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIEHRRRR*TTDPKG
Trigger: CCCTTTTGGGTCGGTAGTTCAGCGCCGGCGCCGGTG...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGCTCCGGCCCCCTGCCTaGTTCTCCTGCCGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKLRPPA*FSCRRF
Trigger: AAAGCGGCGGCAGGAGAAGCAGGCAGGGGGCCGGAG...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAACGTCCTCCGGCCCCCTaGCTGCTTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKRPPAP*LLLLPP
Trigger: CGGCGGCAGGAGAAGCAGGCAGGGGGCCGGAGGACG...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCCTCGGGTCTCGGTCTaGGTCCTCCGGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNPRVSV*VLRPPA
Trigger: GGCAGGGGGCCGGAGGACGCAGACCGAGACCCGAGG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCGTCCTCCGGCCCCCTaGCTGCTTCTCCTGCCGCCG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRERPPAP*LLLLPP
Trigger: CGGCGGCAGGAGAAGCAGGCAGGGGGCCGGAGGACG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTGGCGATGGTCTCGATaGCCCCGGCCCGGGCTACCG +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNWRWSR*PRPGLP
Trigger: CGGTAGCCCGGGCCGGGGGCATCGAGACCATCGCCA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATACCCCACCACCGACATaGCCGGCTCGCGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNTPPPT*PARGPP
Trigger: AGGCGGACCGCGAGCCGGCCATGTCGGTGGTGGGGT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCCCCAGACACCGGGATaGTGGGGAGGCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNPQTPG*WGGRPA
Trigger: AGCTGGCCGGCCTCCCCACCATCCCGGTGTCTGGGG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACCTCGGGTCTCGGTCTaGGTCCTCCGGCCCCCTGCC +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRPRVSV*VLRPPA
Trigger: GGCAGGGGGCCGGAGGACGCAGACCGAGACCCGAGG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CCA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGTCTTTCCTTCACAGCTaGAATTCGTGTAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGSFLHS*NSCSAS
Trigger: GGAGGCGCTACACGAATTCCAGCTGTGAAGGAAAGA...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTGCCTGCCTCACTCTaGCGCGGCTCGCACACCGGC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRELPASL*RGSHTG
Trigger: GCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCTCCGCACCTCGGGTTaGCTGCCTCACTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRELRTSG*LPHSAA
Trigger: CGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCTCCGGCCCCCTGCCTaGTTCTCCTGCCGCCGCTTT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVLRPPA*FSCRRF
Trigger: AAAGCGGCGGCAGGAGAAGCAGGCAGGGGGCCGGAG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATGGCGATGGTCTCGATaGCCCCGGCCCGGGCTACCG +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIWRWSR*PRPGLP
Trigger: CGGTAGCCCGGGCCGGGGGCATCGAGACCATCGCCA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATGGCGATGGTCTCGATaGCCCCGGCCCGGGCTACCG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRWRWSR*PRPGLP
Trigger: CGGTAGCCCGGGCCGGGGGCATCGAGACCATCGCCA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAACCCCACCACCGACATaGCCGGCTCGCGGTCCGCCT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCITPPPT*PARGPP
Trigger: AGGCGGACCGCGAGCCGGCCATGTCGGTGGTGGGGT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCAGACACCGGGATGGTaGGGAGGCCGGCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREQTPGW*GGRPAV
Trigger: GACAGCTGGCCGGCCTCCCCACCATCCCGGTGTCTG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCCCCAGACACCGGGATaGTGGGGAGGCCGGCCAGCT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVPQTPG*WGGRPA
Trigger: AGCTGGCCGGCCTCCCCACCATCCCGGTGTCTGGGG...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGTTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGFSGGL*FRHSMS
Trigger: TGACATGGAGTGTCTGAATCAGAGACCACCAGAAAA...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATACACCGGCGCCGGCGCTaGACTACCGACCCAAAAGGG +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIHRRRR*TTDPKG
Trigger: CCCTTTTGGGTCGGTAGTTCAGCGCCGGCGCCGGTG...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTGCCTGCCTCACTCTaGCGCGGCTCGCACACCGGC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVLPASL*RGSHTG
Trigger: GCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATTGCCTGCCTCACTCTaGCGCGGCTCGCACACCGGC +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRLPASL*RGSHTG
Trigger: GCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGCACCTCGGGTTGCCTaGCTCACTCTGCCGCGGCTC +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRAPRVA*LTLPRL
Trigger: GAGCCGCGGCAGAGTGAGGCAGGCAACCCGAGGTGC...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACTCCGCACCTCGGGTTaGCTGCCTCACTCTGCCGCG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRLRTSG*LPHSAA
Trigger: CGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCCTGCCGCCGCTTTCTaGCCTGGCCGCGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESPAAAF*PGRVLL
Trigger: GAGCAGAACGCGGCCAGGGCAGAAAGCGGCGGCAGG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACCTGCCGCCGCTTTCTaGCCTGGCCGCGTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRPAAAF*PGRVLL
Trigger: GAGCAGAACGCGGCCAGGGCAGAAAGCGGCGGCAGG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR GCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGAGAACGGCCGCCGTTaGCATGGCAGCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIENGRR*HGSDRA
Trigger: GGCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTC...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTGAGAACGGCCGCCGTTaGCATGGCAGCGACAGGGCC +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESENGRR*HGSDRA
Trigger: GGCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTC...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAAGGGGACAGCGGCGGCTaGCTGATAAGAAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKGDSGG*LIRNPG
Trigger: CCCAGGGTTTCTTATCAGCCAGCCGCCGCTGTCCCC...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCAGACACCGGGATGGTaGGGAGGCCGGCCAGCTGTC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVQTPGW*GGRPAV
Trigger: GACAGCTGGCCGGCCTCCCCACCATCCCGGTGTCTG...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCCGCTCCCGTGCCATTaGCTCAAACCTGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVPLPCH*LKPASA
Trigger: GGCGGAGGCAGGTTTGAGCCAATGGCACGGGAGCGG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGACCGCTCCCGTGCCATTaGCTCAAACCTGCCTCCGCC +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERPLPCH*LKPASA
Trigger: GGCGGAGGCAGGTTTGAGCCAATGGCACGGGAGCGG...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGTGTGCAGAAACATTCTaGACTACAAAGCGGCCTATT +
Preference number: 4 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGCAETF*TTKRPI
Trigger: AATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCACA...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGGAAGGGGTCATTGAATaGTCGGCCATGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGEGVIE*SAMKSF
Trigger: AAAAGATTTCATGGCCGAGCATTCAATGACCCCTTC...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTACAGGGCCGCTCCCGTaGCATTGGCTCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVTGPLP*HWLKPA
Trigger: GGCAGGTTTGAGCCAATGGCACGGGAGCGGCCCTGT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTGGGGACAGCGGCGGCTaGCTGATAAGAAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVGDSGG*LIRNPG
Trigger: CCCAGGGTTTCTTATCAGCCAGCCGCCGCTGTCCCC...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR TCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGCCCTTCTCAGAAAGGTaGGAACTTTGGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMPFSER*ELWRKE
Trigger: CTCCTTTCTCCAAAGTTCTCACCTTTCTGAGAAGGG...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAACCCTTCTCAGAAAGGTaGGAACTTTGGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEPFSER*ELWRKE
Trigger: CTCCTTTCTCCAAAGTTCTCACCTTTCTGAGAAGGG...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGCACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTACAGGGCCGCTCCCGTaGCATTGGCTCAAACCTGCC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVTGPLP*HWLKPA
Trigger: GGCAGGTTTGAGCCAATGGCACGGGAGCGGCCCTGT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAACCGGCCCCTCCACGTaGCACTTCCGCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPTGPST*HFRFLL
Trigger: AAGAAGGAAGCGGAAGTGGCACGTGGAGGGGCCGGT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTGGGGACAGCGGCGGCTaGCTGATAAGAAACCCTGGG +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVGDSGG*LIRNPG
Trigger: CCCAGGGTTTCTTATCAGCCAGCCGCCGCTGTCCCC...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGACCCTAGTGAGGAGCTaGTTGTCACCTATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMTLVRS*LSPILS
Trigger: ACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGTCTGGCCGTTCCTCTaGCACTCAGAAGGACACACA +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNVWPFL*HSEGHT
Trigger: TGTGTGTCCTTCTGAGTGTCAGAGGAACGGCCAGAC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR TCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGCGTACAACTGGATCCTaGTCAAGACTCTTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMRTTGS*SRLFLA
Trigger: GGCTAAAAAGAGTCTTGATCAGGATCCAGTTGTACG...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGNSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAACCGGCCCCTCCACGTaGCACTTCCGCTTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRTGPST*HFRFLL
Trigger: AAGAAGGAAGCGGAAGTGGCACGTGGAGGGGCCGGT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
3UTR CAA 72 bp AAAAGAATAAACTGTTGCACCCTAGTGAGGAGCTGGTaGTCACCTATCCTAAGTGCATGTGTCTTCTCCCCT +
Preference number: 4 (lower is better)
Translates to: KRINCCTLVRSW*SPILSACVFSP
Trigger: AGGGGAGAAGACACATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATTCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGTCTGGCCGTTCCTCTaGCACTCAGAAGGACACACA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSVWPFL*HSEGHT
Trigger: TGTGTGTCCTTCTGAGTGTCAGAGGAACGGCCAGAC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR TCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGAGTTTTTCACATTCCTaGTACAGACGTAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMSFSHS*YRRRSA
Trigger: AGCACTCCTACGTCTGTATCAGGAATGTGAAAAACT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGCACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTAGGCCAGACTGACTaGTGCTCCCTCCCGTCATCA +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVLGQTD*CSLPSS
Trigger: TGATGACGGGAGGGAGCATCAGTCAGTCTGGCCTAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTTAGGCCAGACTGACTaGTGCTCCCTCCCGTCATCA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSLGQTD*CSLPSS
Trigger: TGATGACGGGAGGGAGCATCAGTCAGTCTGGCCTAA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGGAAGGGGTCATTGAATaGTCGGCCATGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMEGVIE*SAMKSF
Trigger: AAAAGATTTCATGGCCGAGCATTCAATGACCCCTTC...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGTTCATTCTCCTCAGTTaGGACTTTCTCCACCATAGA +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMFILLS*DFLHHR
Trigger: TCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGGTCTGGGTTTTCTGGTaGTCTCTGATTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKVWVFW*SLIQTL
Trigger: GAGTGTCTGAATCAGAGACCACCAGAAAACCCAGAC...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAGTCAGCTGCTATCTTaGCATAATGCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKSQLLS*HNAAAS
Trigger: AGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGACCCTAGTGAGGAGCTaGTTGTCACCTATCCTAAGT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKTLVRS*LSPILS
Trigger: ACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAAAGATTCTACCCAATaGGCAGCCGGTCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPKDSTQ*AAGPRR
Trigger: TCTCCGGGGACCGGCTGCCCATTGGGTAGAATCTTT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGTCTGGCCGTTCCTCTaGCACTCAGAAGGACACACA +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRVWPFL*HSEGHT
Trigger: TGTGTGTCCTTCTGAGTGTCAGAGGAACGGCCAGAC...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGGCACAAGCAGACACTTaGAAAGCTGAATGTCCCATA +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKAQADT*KAECPI
Trigger: TATGGGACATTCAGCTTTTCAAGTGTCTGCTTGTGC...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAACGACTAAAGACTTCATaGACACCTTCAGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: FILLSWDFLHHRCRRDGERLKTS*TPSVSS
Trigger: AGAAGATACTGAAGGTGTTCATGAAGTCTTTAGTCG...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTGATCCAAATGATATaGCTGACCGGCGCCTCCACC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRELIQMI*LTGAST
Trigger: GGTGGAGGCGCCGGTCAGTCATATCATTTGGATCAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAACAACTTGTCAACATATaGTTGTTTAGCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEQLVNI*LFSLVL
Trigger: GAGGACCAAGCTAAACAAGCATATGTTGACAAGTTG...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGATTTCTGAAGTCAGCTaGTATCTTGGCATAATGCTG +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMISEVS*YLGIML
Trigger: CAGCATTATGCCAAGATAGCAGCTGACTTCAGAAAT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGCATCAGTTTGTACCTaGGGCTGTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNASVCT*GCVPAS
Trigger: TGAAGCTGGAACACAGCCCCAGGTACAAACTGATGC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAAGATTAATCCCTTGTaGAAGAGGGAAAGTTGGCCC +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKKINPL*KRESWP
Trigger: GGGCCAACTTTCCCTCTTCCACAAGGGATTAATCTT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGGCTACCTGGTCTAGATaGAATGAAGTGTTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMATWSR*NEVLAL
Trigger: TAAAGCTAACACTTCATTCCATCTAGACCAGGTAGC...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAAAAGATTCTACCCAATaGGCAGCCGGTCCCCGGAGA +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIKDSTQ*AAGPRR
Trigger: TCTCCGGGGACCGGCTGCCCATTGGGTAGAATCTTT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGCTGTTACTGGTTTCTTaGGGCTGTTTTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKLLLVS*GCFQQF
Trigger: AAACTGCTGAAAACAGCCTCAAGAAACCAGTAACAG...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAGTTTTTCACATTCCTaGTACAGACGTAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKSFSHS*YRRRSA
Trigger: AGCACTCCTACGTCTGTATCAGGAATGTGAAAAACT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGAGACTCTTTTTAGCCTaGGCATTCATGACATTATTC +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMRLFLA*AFMTLF
Trigger: GAATAATGTCATGAATGCTCAGGCTAAAAAGAGTCT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAAACAGAAAGCTTAGTATaGATTCACAATTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: FILLSWDFLHHRCRRDGETESLV*IHNSTG
Trigger: TCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGT...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp ATTTTTCTCATTAGGGTAACATTCACCATTCTGATGTGGAGGTTCAGCACCAAACACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: IFLIRVTFTILMWRFSTKHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...TTTGGTGCTGAACCTCCACATCAGAATGGTGAATGTTACCCTAATGAGAAAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCCACAGGAATCATTCTaGTGTGGAGGTTCAGCACCA +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREPQESF*CGGSAP
Trigger: TGGTGCTGAACCTCCACATCAGAATGATTCCTGTGG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000435381.5
CDS-3UTR GCA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGTTGCTGATTTTTGGCTaGAACTCCGATTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMLLIFG*NSDCSI
Trigger: AATAGAACAATCGGAGTTGCAGCCAAAAATCAGCAA...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAATATTGGAAAAGGAACTaGATCTGTGACGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEYWKRN*ICDGKF
Trigger: GAATTTTCCGTCACAGATGCAGTTCCTTTTCCAATA...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATCTTTCCTTCACAGCTaGAATTCGTGTAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPSFLHS*NSCSAS
Trigger: GGAGGCGCTACACGAATTCCAGCTGTGAAGGAAAGA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTCTTTCCTTCACAGCTaGAATTCGTGTAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSSFLHS*NSCSAS
Trigger: GGAGGCGCTACACGAATTCCAGCTGTGAAGGAAAGA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTCTTTCCTTCACAGCTaGAATTCGTGTAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVSFLHS*NSCSAS
Trigger: GGAGGCGCTACACGAATTCCAGCTGTGAAGGAAAGA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATCTTTCCTTCACAGCTaGAATTCGTGTAGCGCCTCC +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERSFLHS*NSCSAS
Trigger: GGAGGCGCTACACGAATTCCAGCTGTGAAGGAAAGA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGGAGAAAGGAGCAGCATaGTTTCGACTAAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKEKGAA*FRLKTS
Trigger: TGAAGTCTTTAGTCGAAACCATGCTGCTCCTTTCTC...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTTCATTCTCCTCAGTTaGGACTTTCTCCACCATAGA +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKFILLS*DFLHHR
Trigger: TCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGCATCAGTTTGTACCTaGGGCTGTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSASVCT*GCVPAS
Trigger: TGAAGCTGGAACACAGCCCCAGGTACAAACTGATGC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCATCAGTTTGTACCTaGGGCTGTGTTCCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERASVCT*GCVPAS
Trigger: TGAAGCTGGAACACAGCCCCAGGTACAAACTGATGC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAGTCAGCTGCTATCTTaGCATAATGCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNSQLLS*HNAAAS
Trigger: AGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTTACTACCGGGAGGTaGTGTCCGATCCTTAACGCT +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREFTTGR*CPILNA
Trigger: AGCGTTAAGGATCGGACACCACCTCCCGGTAGTAAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
3UTR CAA 72 bp AAACCTCAGCAGTCAAGTGTTACTAAACCTCATAGTTaGAAGATATTACTCCGTGATGTGTGGAGCACAGAG +
Preference number: 4 (lower is better)
Translates to: KPQQSSVTKPHS*KILLRDVWSTE
Trigger: CTCTGTGCTCCACACATCACGGAGTAATATCTTCAAACTATGAGGTTTAGTAACACTTGACTGCTGAGGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCCCTTCTCAGAAAGGTaGGAACTTTGGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVPFSER*ELWRKE
Trigger: CTCCTTTCTCCAAAGTTCTCACCTTTCTGAGAAGGG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCGTTCTTCAGCTTCCTaGAACCGAACTTTAACTGGA +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNRSSAS*NRTLTG
Trigger: TCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCGTACAACTGGATCCTaGTCAAGACTCTTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNRTTGS*SRLFLA
Trigger: GGCTAAAAAGAGTCTTGATCAGGATCCAGTTGTACG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTCTTTCCAGTTTGGGTaGTTCAATTTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKSFQFG*FNFWFR
Trigger: CCGAAACCAAAAATTGAATCACCCAAACTGGAAAGA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGAAGATATTACTCCGTaGTGTGTGGAGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNEDITP*CVEHRV
Trigger: TACTCTGTGCTCCACACATCACGGAGTAATATCTTC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAGGAAGCATCAGAGCTaGGGAAATAAACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRERKHQS*GNKPQQ
Trigger: CTGCTGAGGTTTATTTCCTCAGCTCTGATGCTTCCT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAGGAAGCATCAGAGCTaGGGAAATAAACCTCAGCAG +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPRKHQS*GNKPQQ
Trigger: CTGCTGAGGTTTATTTCCTCAGCTCTGATGCTTCCT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTTTCTCCACCATAGATaGCGTAGAGATGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKFLHHR*RRDGEN
Trigger: ATTTTCACCATCTCTACGGCATCTATGGTGGAGAAA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGTCACCTATCCTAAGTaGATGTGTCTTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSVTYPK*MCLLPY
Trigger: GTAGGGGAGAAGACACATGCACTTAGGATAGGTGAC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGTCACCTATCCTAAGTaGATGTGTCTTCTCCCCTAC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREVTYPK*MCLLPY
Trigger: GTAGGGGAGAAGACACATGCACTTAGGATAGGTGAC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCCACAGGCGTTTTGCTaGCCTAATAAAACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVPQAFC*PNKTGN
Trigger: GTTGCCTGTTTTATTAGGGCAGCAAAACGCCTGTGG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCACCACAGGCGTTTTGCTaGCCTAATAAAACAGGCAAC +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPPQAFC*PNKTGN
Trigger: GTTGCCTGTTTTATTAGGGCAGCAAAACGCCTGTGG...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTTTCTCATCCAGGCTTaGGAGATCCTGCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKFLIQA*EILLIN
Trigger: ATTTATAAGCAGGATCTCCCAAGCCTGGATGAGAAA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAAGGAGTGCTCGTATTTTaGATTTTGCATCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIEGVLVF*ILHPTC
Trigger: ACAAGTTGGATGCAAAATCCAAAATACGAGCACTCC...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGCCAGATCAGAGATATTaGAAAAGGAACTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKPDQRY*KRNCIC
Trigger: ACAGATGCAGTTCCTTTTCCAATATCTCTGATCTGG...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGTCTGGGTTTTCTGGTaGTCTCTGATTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPVWVFW*SLIQTL
Trigger: GAGTGTCTGAATCAGAGACCACCAGAAAACCCAGAC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAGTCAGCTGCTATCTTaGCATAATGCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPSQLLS*HNAAAS
Trigger: AGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAGCACGTACAACTaGATCCTGATCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNLSTYN*ILIKTL
Trigger: AAGAGTCTTGATCAGGATCCAGTTGTACGTGCTCAG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAGTTTGTTCCAACAGTaGATAAAGGGGTACTTCTAT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKSLFQQ*IKGYFY
Trigger: ATAGAAGTACCCCTTTATTCACTGTTGGAACAAACT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCCCTTCTCAGAAAGGTaGGAACTTTGGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESPFSER*ELWRKE
Trigger: CTCCTTTCTCCAAAGTTCTCACCTTTCTGAGAAGGG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACCCTTCTCAGAAAGGTaGGAACTTTGGAGAAAGGAG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRPFSER*ELWRKE
Trigger: CTCCTTTCTCCAAAGTTCTCACCTTTCTGAGAAGGG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREFSGGL*FRHSMS
Trigger: TGACATGGAGTGTCTGAATCAGAGACCACCAGAAAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVFSGGL*FRHSMS
Trigger: TGACATGGAGTGTCTGAATCAGAGACCACCAGAAAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
40% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCACGTTCTTCAGCTTCCTaGAACCGAACTTTAACTGGA +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPRSSAS*NRTLTG
Trigger: TCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACG...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCGTTCTTCAGCTTCCTaGAACCGAACTTTAACTGGA +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRERSSAS*NRTLTG
Trigger: TCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCGTACAACTGGATCCTaGTCAAGACTCTTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRERTTGS*SRLFLA
Trigger: GGCTAAAAAGAGTCTTGATCAGGATCCAGTTGTACG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGACGTACAACTGGATCCTaGTCAAGACTCTTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERRTTGS*SRLFLA
Trigger: GGCTAAAAAGAGTCTTGATCAGGATCCAGTTGTACG...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACACCCACACACATGCTaGATGGAGAGCAAAATGCAA +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRHPHTC*MESKMQ
Trigger: TTGCATTTTGCTCTCCATTCAGCATGTGTGTGGGTG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGAAGATATTACTCCGTaGTGTGTGGAGCACAGAGTA +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPEDITP*CVEHRV
Trigger: TACTCTGTGCTCCACACATCACGGAGTAATATCTTC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATATCAGACGTACAAATaGCGAGCTACCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPYQTYK*RATWSR
Trigger: TCTAGACCAGGTAGCTCGTCATTTGTACGTCTGATA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAAAATAAGCCAATTCTaGGATGTTGAAGCACCTATC +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKKISQF*DVEAPI
Trigger: GATAGGTGCTTCAACATCTCAGAATTGGCTTATTTT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAGACACCGTATTGTTTaGATGAGTGATTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKRHRIV*MSDLLI
Trigger: AATCAGCAAATCACTCATGCAAACAATACGGTGTCT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGAAGGGGTCATTGAATaGTCGGCCATGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNEGVIE*SAMKSF
Trigger: AAAAGATTTCATGGCCGAGCATTCAATGACCCCTTC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTACATCCTCTGGCTACTaGTTCATCTGCATTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVTSSGY*FICIEC
Trigger: ACACTCAATGCAGATGAAGCAGTAGCCAGAGGATGT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAACATCCTCTGGCTACTaGTTCATCTGCATTGAGTGT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERTSSGY*FICIEC
Trigger: ACACTCAATGCAGATGAAGCAGTAGCCAGAGGATGT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTTCTCTAACTTTAAATaGCGGGGAAAGTATTGCACA +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKFSNFK*RGKYCT
Trigger: TGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAAAGCGGCCTATTTTTaGTTCTGGATATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNKAAYF*FWIWNS
Trigger: GGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAACACAATCTGTTACTaGTTTCTTGAGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKNTICY*FLEAVF
Trigger: GAAAACAGCCTCAAGAAACCAGTAACAGATTGTGTT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTTTTGCTTCTGGATATaGAACTCCTTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNFCFWI*NSLGIR
Trigger: TCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGCCTATTTTTGCTTCTaGATATGGAACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREAYFCF*IWNSLG
Trigger: CCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGCCTATTTTTGCTTCTaGATATGGAACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSAYFCF*IWNSLG
Trigger: CCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTGCCTATTTTTGCTTCTaGATATGGAACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVAYFCF*IWNSLG
Trigger: CCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGC...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTGTCTGGGTTTTCTGGTaGTCTCTGATTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESVWVFW*SLIQTL
Trigger: GAGTGTCTGAATCAGAGACCACCAGAAAACCCAGAC...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTCTGGGTTTTCTGGTaGTCTCTGATTCAGACACTC +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIVWVFW*SLIQTL
Trigger: GAGTGTCTGAATCAGAGACCACCAGAAAACCCAGAC...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTCACTGTTGTCTTGCTaGACATTTTTATCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKSLLSC*TFLSVS
Trigger: AGACACTGATAAAAATGTCCAGCAAGACAACAGTGA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAATCACTGTTGTCTTGCTaGACATTTTTATCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIESLLSC*TFLSVS
Trigger: AGACACTGATAAAAATGTCCAGCAAGACAACAGTGA...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAGTCAGCTGCTATCTTaGCATAATGCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVSQLLS*HNAAAS
Trigger: AGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAGTCAGCTGCTATCTTaGCATAATGCTGCAGCCTCT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESSQLLS*HNAAAS
Trigger: AGAGGCTGCAGCATTATGCCAAGATAGCAGCTGACT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
3UTR CAA 72 bp CATTTGGAGTTCTTTCCAGTTTGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAACGGGTTCACATGTGT +
Preference number: 4 (lower is better)
Translates to: HLEFFPVWVIQF*VSVVLQRVHMC
Trigger: ACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAATCACCCAAACTGGAAAGAACTCCAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCTGTTACTGGTTTCTTaGGGCTGTTTTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVLLLVS*GCFQQF
Trigger: AAACTGCTGAAAACAGCCTCAAGAAACCAGTAACAG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTCTGTTACTGGTTTCTTaGGGCTGTTTTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSLLLVS*GCFQQF
Trigger: AAACTGCTGAAAACAGCCTCAAGAAACCAGTAACAG...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTGCACAAGCAGACACTTaGAAAGCTGAATGTCCCATA +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESAQADT*KAECPI
Trigger: TATGGGACATTCAGCTTTTCAAGTGTCTGCTTGTGC...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTGCACAAGCAGACACTTaGAAAGCTGAATGTCCCATA +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVAQADT*KAECPI
Trigger: TATGGGACATTCAGCTTTTCAAGTGTCTGCTTGTGC...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAGTTTTTCACATTCCTaGTACAGACGTAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSSFSHS*YRRRSA
Trigger: AGCACTCCTACGTCTGTATCAGGAATGTGAAAAACT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAGTTTTTCACATTCCTaGTACAGACGTAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRESFSHS*YRRRSA
Trigger: AGCACTCCTACGTCTGTATCAGGAATGTGAAAAACT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAGTTCTTCAAATTGTaGCCTGTTCATCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSEREFFKL*PVHLSG
Trigger: TCCGGAAAGATGAACAGGTCACAATTTGAAGAACTC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGTTCTTCAAATTGTaGCCTGTTCATCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSEFFKL*PVHLSG
Trigger: TCCGGAAAGATGAACAGGTCACAATTTGAAGAACTC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTGAGTTCTTCAAATTGTaGCCTGTTCATCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVEFFKL*PVHLSG
Trigger: TCCGGAAAGATGAACAGGTCACAATTTGAAGAACTC...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGAGTTCTTCAAATTGTaGCCTGTTCATCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPEFFKL*PVHLSG
Trigger: TCCGGAAAGATGAACAGGTCACAATTTGAAGAACTC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTGTGCAGAAACATTCTaGACTACAAAGCGGCCTATT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSCAETF*TTKRPI
Trigger: AATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCACA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVFSGGL*FRHSMS
Trigger: TGACATGGAGTGTCTGAATCAGAGACCACCAGAAAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
39% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCA +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESFSGGL*FRHSMS
Trigger: TGACATGGAGTGTCTGAATCAGAGACCACCAGAAAA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCGTTCTTCAGCTTCCTaGAACCGAACTTTAACTGGA +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESRSSAS*NRTLTG
Trigger: TCCAGTTAAAGTTCGGTTTCAGGAAGCTGAAGAACG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACGTACAACTGGATCCTaGTCAAGACTCTTTTTAGCC +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRRTTGS*SRLFLA
Trigger: GGCTAAAAAGAGTCTTGATCAGGATCCAGTTGTACG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTCTTTCCAGTTTGGGTaGTTCAATTTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNSFQFG*FNFWFR
Trigger: CCGAAACCAAAAATTGAATCACCCAAACTGGAAAGA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATATCAGACGTACAAATaGCGAGCTACCTGGTCTAGA +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIYQTYK*RATWSR
Trigger: TCTAGACCAGGTAGCTCGTCATTTGTACGTCTGATA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGCTACTGCTTCATCTaGATTGAGTGTTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERGYCFI*IECCAN
Trigger: ATTAGCACAACACTCAATGCAGATGAAGCAGTAGCC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGGCTACTGCTTCATCTaGATTGAGTGTTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSGYCFI*IECCAN
Trigger: ATTAGCACAACACTCAATGCAGATGAAGCAGTAGCC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAACATCCTCTGGCTACTaGTTCATCTGCATTGAGTGT +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRTSSGY*FICIEC
Trigger: ACACTCAATGCAGATGAAGCAGTAGCCAGAGGATGT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTACATCCTCTGGCTACTaGTTCATCTGCATTGAGTGT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVTSSGY*FICIEC
Trigger: ACACTCAATGCAGATGAAGCAGTAGCCAGAGGATGT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGCGGCCTATTTTTaGTTCTGGATATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREKAAYF*FWIWNS
Trigger: GGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAAAGCGGCCTATTTTTaGTTCTGGATATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPKAAYF*FWIWNS
Trigger: GGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAAAGCGGCCTATTTTTaGTTCTGGATATGGAACTCC +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSKAAYF*FWIWNS
Trigger: GGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGCTTCACTGTTGTCTTaGTGGACATTTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNASLLS*WTFLSV
Trigger: CACTGATAAAAATGTCCAGCAAGACAACAGTGAAGC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCAACTTGTCAACATATaGTTGTTTAGCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNQLVNI*LFSLVL
Trigger: GAGGACCAAGCTAAACAAGCATATGTTGACAAGTTG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATATTTCTGAAGTCAGCTaGTATCTTGGCATAATGCTG +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNISEVS*YLGIML
Trigger: CAGCATTATGCCAAGATAGCAGCTGACTTCAGAAAT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAAAAAGAATAAACTGTTaGACCCTAGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERKRINC*TLVRSW
Trigger: CCAGCTCCTCACTAGGGTGCAACAGTTTATTCTTTT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTCCACCATTTTTCAATaGAACCAAATCGTAACTCAA +
Preference number: 4 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKSTIFQ*NQIVTQ
Trigger: TTGAGTTACGATTTGGTTCCATTGAAAAATGGTGGA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGAGAAAGGAGCAGCATaGTTTCGACTAAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREEKGAA*FRLKTS
Trigger: TGAAGTCTTTAGTCGAAACCATGCTGCTCCTTTCTC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAGAAAGGAGCAGCATaGTTTCGACTAAAGACTTCA +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSEREKGAA*FRLKTS
Trigger: TGAAGTCTTTAGTCGAAACCATGCTGCTCCTTTCTC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTTTTGCTTCTGGATATaGAACTCCTTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSFCFWI*NSLGIR
Trigger: TCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTTTGCTTCTGGATATaGAACTCCTTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVFCFWI*NSLGIR
Trigger: TCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATTTTGCTTCTGGATATaGAACTCCTTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERFCFWI*NSLGIR
Trigger: TCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGCCTATTTTTGCTTCTaGATATGGAACTCCTTGGGG +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIAYFCF*IWNSLG
Trigger: CCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGC...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCTGAGCACGTACAACTaGATCCTGATCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESLSTYN*ILIKTL
Trigger: AAGAGTCTTGATCAGGATCCAGTTGTACGTGCTCAG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACTGAGCACGTACAACTaGATCCTGATCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRLSTYN*ILIKTL
Trigger: AAGAGTCTTGATCAGGATCCAGTTGTACGTGCTCAG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp ATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATTCTGAGCACGTACAACTaGATCCTGATCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: IQFLVSVVLQRVHMCCSILSTYN*ILIKTL
Trigger: AAGAGTCTTGATCAGGATCCAGTTGTACGTGCTCAG...AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATACTGAGCACGTACAACTaGATCCTGATCAAGACTCTT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCILSTYN*ILIKTL
Trigger: AAGAGTCTTGATCAGGATCCAGTTGTACGTGCTCAG...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAATATTTGGGCCATTTaGAGTTCTTTCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNNIWAI*SSFQFG
Trigger: CCCAAACTGGAAAGAACTCCAAATGGCCCAAATATT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTTCACCATTCTGATGTaGAGGTTCAGCACCAAAATT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNFTILM*RFSTKI
Trigger: AATTTTGGTGCTGAACCTCCACATCAGAATGGTGAA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAATTTGCATCAGTGTCTaGGTTTTCTGGTGGTCTCTG +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIICISV*VFWWSL
Trigger: CAGAGACCACCAGAAAACCCAGACACTGATGCAAAT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380405.7
CDS-3UTR CCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATCTTCTCGAGCCTTCTaGAAAGATTCTACCCAATGG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRSSRAF*KDSTQW
Trigger: CCATTGGGTAGAATCTTTCCAGAAGGCTCGAGAAGA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATACTGTTACTGGTTTCTTaGGGCTGTTTTCAGCAGTTT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCILLLVS*GCFQQF
Trigger: AAACTGCTGAAAACAGCCTCAAGAAACCAGTAACAG...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAAAGAAGGAGGGGACTaGAATAACACAATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSKEGGD*NNTICY
Trigger: GTAACAGATTGTGTTATTTCAGTCCCCTCCTTCTTT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGAAGGAGGGGACTaGAATAACACAATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREKEGGD*NNTICY
Trigger: GTAACAGATTGTGTTATTTCAGTCCCCTCCTTCTTT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAGTTTTTCACATTCCTaGTACAGACGTAGGAGTGCT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVSFSHS*YRRRSA
Trigger: AGCACTCCTACGTCTGTATCAGGAATGTGAAAAACT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTGAGTTCTTCAAATTGTaGCCTGTTCATCTTTCCGGA +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVEFFKL*PVHLSG
Trigger: TCCGGAAAGATGAACAGGTCACAATTTGAAGAACTC...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCGACTAAAGACTTCATaGACACCTTCAGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVRLKTS*TPSVSS
Trigger: AGAAGATACTGAAGGTGTTCATGAAGTCTTTAGTCG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGACGACTAAAGACTTCATaGACACCTTCAGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERRLKTS*TPSVSS
Trigger: AGAAGATACTGAAGGTGTTCATGAAGTCTTTAGTCG...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCACGACTAAAGACTTCATaGACACCTTCAGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPRLKTS*TPSVSS
Trigger: AGAAGATACTGAAGGTGTTCATGAAGTCTTTAGTCG...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATGTGCAGAAACATTCTaGACTACAAAGCGGCCTATT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCICAETF*TTKRPI
Trigger: AATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCACA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATGTGCAGAAACATTCTaGACTACAAAGCGGCCTATT +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRCAETF*TTKRPI
Trigger: AATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCACA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTGTGCAGAAACATTCTaGACTACAAAGCGGCCTATT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVCAETF*TTKRPI
Trigger: AATAGGCCGCTTTGTAGTTCAGAATGTTTCTGCACA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTTGTTTTAATTTCCTaGGCACGTACAACTGGATCC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVFVLIS*ARTTGS
Trigger: GGATCCAGTTGTACGTGCTCAGGAAATTAAAACAAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATTTGTTTTAATTTCCTaGGCACGTACAACTGGATCC +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERFVLIS*ARTTGS
Trigger: GGATCCAGTTGTACGTGCTCAGGAAATTAAAACAAA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTCTTTCCAGTTTGGGTaGTTCAATTTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSSFQFG*FNFWFR
Trigger: CCGAAACCAAAAATTGAATCACCCAAACTGGAAAGA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTCTTTCCAGTTTGGGTaGTTCAATTTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVSFQFG*FNFWFR
Trigger: CCGAAACCAAAAATTGAATCACCCAAACTGGAAAGA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTAAACCTCATAGTTTaGAGATATTACTCCGTGATG +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNLNLIV*RYYSVM
Trigger: CATCACGGAGTAATATCTTCAAACTATGAGGTTTAG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTAGCTGTTCCCAGTACTaGAATAACACAATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVSCSQY*NNTICY
Trigger: GTAACAGATTGTGTTATTTCAGTACTGGGAACAGCT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445273.6
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAGACACCGTATTGTTTaGATGAGTGATTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNRHRIV*MSDLLI
Trigger: AATCAGCAAATCACTCATGCAAACAATACGGTGTCT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGAAGGGGTCATTGAATaGTCGGCCATGAAATCTTTT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIEGVIE*SAMKSF
Trigger: AAAAGATTTCATGGCCGAGCATTCAATGACCCCTTC...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAACATGGCTGTTATCTaGTCCACACTAAATAGATGT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNNMAVI*STLNRC
Trigger: ACATCTATTTAGTGTGGAGCAGATAACAGCCATGTT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTGGCTACTGCTTCATCTaGATTGAGTGTTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVGYCFI*IECCAN
Trigger: ATTAGCACAACACTCAATGCAGATGAAGCAGTAGCC...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGGCTACTGCTTCATCTaGATTGAGTGTTGTGCTAAT +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRGYCFI*IECCAN
Trigger: ATTAGCACAACACTCAATGCAGATGAAGCAGTAGCC...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTTTCTCCACCATAGATaGCGTAGAGATGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSFLHHR*RRDGEN
Trigger: ATTTTCACCATCTCTACGGCATCTATGGTGGAGAAA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATTTCTCCACCATAGATaGCGTAGAGATGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPFLHHR*RRDGEN
Trigger: ATTTTCACCATCTCTACGGCATCTATGGTGGAGAAA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGCTTCACTGTTGTCTTaGTGGACATTTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREASLLS*WTFLSV
Trigger: CACTGATAAAAATGTCCAGCAAGACAACAGTGAAGC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTGCTTCACTGTTGTCTTaGTGGACATTTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVASLLS*WTFLSV
Trigger: CACTGATAAAAATGTCCAGCAAGACAACAGTGAAGC...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCAACTTGTCAACATATaGTTGTTTAGCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREQLVNI*LFSLVL
Trigger: GAGGACCAAGCTAAACAAGCATATGTTGACAAGTTG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGATTTCTGAAGTCAGCTaGTATCTTGGCATAATGCTG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREISEVS*YLGIML
Trigger: CAGCATTATGCCAAGATAGCAGCTGACTTCAGAAAT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAATTTCTGAAGTCAGCTaGTATCTTGGCATAATGCTG +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPISEVS*YLGIML
Trigger: CAGCATTATGCCAAGATAGCAGCTGACTTCAGAAAT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAAAAAGAATAAACTGTTaGACCCTAGTGAGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRKRINC*TLVRSW
Trigger: CCAGCTCCTCACTAGGGTGCAACAGTTTATTCTTTT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATTTCTCATCCAGGCTTaGGAGATCCTGCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPFLIQA*EILLIN
Trigger: ATTTATAAGCAGGATCTCCCAAGCCTGGATGAGAAA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTTCTCATCCAGGCTTaGGAGATCCTGCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVFLIQA*EILLIN
Trigger: ATTTATAAGCAGGATCTCCCAAGCCTGGATGAGAAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTGGAGTGCTCGTATTTTaGATTTTGCATCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVGVLVF*ILHPTC
Trigger: ACAAGTTGGATGCAAAATCCAAAATACGAGCACTCC...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGGAGTGCTCGTATTTTaGATTTTGCATCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSGVLVF*ILHPTC
Trigger: ACAAGTTGGATGCAAAATCCAAAATACGAGCACTCC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGGAGTGCTCGTATTTTaGATTTTGCATCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPGVLVF*ILHPTC
Trigger: ACAAGTTGGATGCAAAATCCAAAATACGAGCACTCC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGAGTGCTCGTATTTTaGATTTTGCATCCAACTTGT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERGVLVF*ILHPTC
Trigger: ACAAGTTGGATGCAAAATCCAAAATACGAGCACTCC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCCAGATCAGAGATATTaGAAAAGGAACTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVPDQRY*KRNCIC
Trigger: ACAGATGCAGTTCCTTTTCCAATATCTCTGATCTGG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTTTGCTTCTGGATATaGAACTCCTTGGGGATCAGA +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIFCFWI*NSLGIR
Trigger: TCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTCATTCTCCTCAGTTaGGACTTTCTCCACCATAGA +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIFILLS*DFLHHR
Trigger: TCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATTCATTCTCCTCAGTTaGGACTTTCTCCACCATAGA +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRFILLS*DFLHHR
Trigger: TCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTCACTGTTGTCTTGCTaGACATTTTTATCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNSLLSC*TFLSVS
Trigger: AGACACTGATAAAAATGTCCAGCAAGACAACAGTGA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAATATTTGGGCCATTTaGAGTTCTTTCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPNIWAI*SSFQFG
Trigger: CCCAAACTGGAAAGAACTCCAAATGGCCCAAATATT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAATATTTGGGCCATTTaGAGTTCTTTCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRENIWAI*SSFQFG
Trigger: CCCAAACTGGAAAGAACTCCAAATGGCCCAAATATT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAATATTTGGGCCATTTaGAGTTCTTTCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSNIWAI*SSFQFG
Trigger: CCCAAACTGGAAAGAACTCCAAATGGCCCAAATATT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTCACCATTCTGATGTaGAGGTTCAGCACCAAAATT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVFTILM*RFSTKI
Trigger: AATTTTGGTGCTGAACCTCCACATCAGAATGGTGAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTTCACCATTCTGATGTaGAGGTTCAGCACCAAAATT +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSFTILM*RFSTKI
Trigger: AATTTTGGTGCTGAACCTCCACATCAGAATGGTGAA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTATTGTTTGCATGAGTaGTTTGCTGATTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREYCLHE*FADFWL
Trigger: CAGCCAAAAATCAGCAAATCACTCATGCAAACAATA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAAAAGAAGGAGGGGACTaGAATAACACAATCTGTTAC +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRKEGGD*NNTICY
Trigger: GTAACAGATTGTGTTATTTCAGTCCCCTCCTTCTTT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000630972.2
CDS-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATCACATCTTCTACTTTaGGATGAGTTTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERSHLLL*DEFVPT
Trigger: TGTTGGAACAAACTCATCTCAAAGTAGAAGATGTGA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTCACATCTTCTACTTTaGGATGAGTTTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSSHLLL*DEFVPT
Trigger: TGTTGGAACAAACTCATCTCAAAGTAGAAGATGTGA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTCACATCTTCTACTTTaGGATGAGTTTGTTCCAACA +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVSHLLL*DEFVPT
Trigger: TGTTGGAACAAACTCATCTCAAAGTAGAAGATGTGA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCGACTAAAGACTTCATaGACACCTTCAGTATCTTCT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESRLKTS*TPSVSS
Trigger: AGAAGATACTGAAGGTGTTCATGAAGTCTTTAGTCG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTAGACTCTTTTTAGCCTaGGCATTCATGACATTATTC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVRLFLA*AFMTLF
Trigger: GAATAATGTCATGAATGCTCAGGCTAAAAAGAGTCT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAGACTCTTTTTAGCCTaGGCATTCATGACATTATTC +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPRLFLA*AFMTLF
Trigger: GAATAATGTCATGAATGCTCAGGCTAAAAAGAGTCT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTTGTTTTAATTTCCTaGGCACGTACAACTGGATCC +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIFVLIS*ARTTGS
Trigger: GGATCCAGTTGTACGTGCTCAGGAAATTAAAACAAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTTGTTTTAATTTCCTaGGCACGTACAACTGGATCC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVFVLIS*ARTTGS
Trigger: GGATCCAGTTGTACGTGCTCAGGAAATTAAAACAAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATTTTTGTTTTAATTTCCTaGGCACGTACAACTGGATCC +
Preference number: 4 (lower is better)
Translates to: IQFLVSVVLQRVHMCCSIFVLIS*ARTTGS
Trigger: GGATCCAGTTGTACGTGCTCAGGAAATTAAAACAAA...AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCTTTCCAGTTTGGGTaGTTCAATTTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESSFQFG*FNFWFR
Trigger: CCGAAACCAAAAATTGAATCACCCAAACTGGAAAGA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATCTTTCCAGTTTGGGTaGTTCAATTTTTGGTTTCGG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRSFQFG*FNFWFR
Trigger: CCGAAACCAAAAATTGAATCACCCAAACTGGAAAGA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVNSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPNSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAAATTCCACAGGAATCTaGAAGTTACCAAGGCAATTT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERNSTGI*KLPRQF
Trigger: AAATTGCCTTGGTAACTTTCAGATTCCTGTGGAATT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTACAGAAAGCTTAGTATaGATTCACAATTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSTESLV*IHNSTG
Trigger: TCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGACAGAAAGCTTAGTATaGATTCACAATTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRETESLV*IHNSTG
Trigger: TCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTCTAAACCTCATAGTTTaGAGATATTACTCCGTGATG +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSLNLIV*RYYSVM
Trigger: CATCACGGAGTAATATCTTCAAACTATGAGGTTTAG...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR TCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAATAAGCCAATTCTaGGATGTTGAAGCACCTATC +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREKISQF*DVEAPI
Trigger: GATAGGTGCTTCAACATCTCAGAATTGGCTTATTTT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTTGCTGATTTTTGGCTaGAACTCCGATTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVLLIFG*NSDCSI
Trigger: AATAGAACAATCGGAGTTGCAGCCAAAAATCAGCAA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATTGCTGATTTTTGGCTaGAACTCCGATTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERLLIFG*NSDCSI
Trigger: AATAGAACAATCGGAGTTGCAGCCAAAAATCAGCAA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAGACACCGTATTGTTTaGATGAGTGATTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPRHRIV*MSDLLI
Trigger: AATCAGCAAATCACTCATGCAAACAATACGGTGTCT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAACATGGCTGTTATCTaGTCCACACTAAATAGATGT +
Preference number: 4 (lower is better)
Translates to: LIKVFTISYNRIDISSIPNMAVI*STLNRC
Trigger: ACATCTATTTAGTGTGGAGCAGATAACAGCCATGTT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAAACATGGCTGTTATCTaGTCCACACTAAATAGATGT +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERNMAVI*STLNRC
Trigger: ACATCTATTTAGTGTGGAGCAGATAACAGCCATGTT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTCTCTAACTTTAAATaGCGGGGAAAGTATTGCACA +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVREFSNFK*RGKYCT
Trigger: TGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTATTGGAAAAGGAACTaGATCTGTGACGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSYWKRN*ICDGKF
Trigger: GAATTTTCCGTCACAGATGCAGTTCCTTTTCCAATA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTATTGGAAAAGGAACTaGATCTGTGACGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVYWKRN*ICDGKF
Trigger: GAATTTTCCGTCACAGATGCAGTTCCTTTTCCAATA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATATTGGAAAAGGAACTaGATCTGTGACGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERYWKRN*ICDGKF
Trigger: GAATTTTCCGTCACAGATGCAGTTCCTTTTCCAATA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTCTCCACCATAGATaGCGTAGAGATGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESFLHHR*RRDGEN
Trigger: ATTTTCACCATCTCTACGGCATCTATGGTGGAGAAA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTTCTCCACCATAGATaGCGTAGAGATGGTGAAAAT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVFLHHR*RRDGEN
Trigger: ATTTTCACCATCTCTACGGCATCTATGGTGGAGAAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGCTTCACTGTTGTCTTaGTGGACATTTTTATCAGTG +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRASLLS*WTFLSV
Trigger: CACTGATAAAAATGTCCAGCAAGACAACAGTGAAGC...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCAACTTGTCAACATATaGTTGTTTAGCTTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVQLVNI*LFSLVL
Trigger: GAGGACCAAGCTAAACAAGCATATGTTGACAAGTTG...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTCCACCATTTTTCAATaGAACCAAATCGTAACTCAA +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNSTIFQ*NQIVTQ
Trigger: TTGAGTTACGATTTGGTTCCATTGAAAAATGGTGGA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTAACACAATCTGTTACTaGTTTCTTGAGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVNTICY*FLEAVF
Trigger: GAAAACAGCCTCAAGAAACCAGTAACAGATTGTGTT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATTTCTCATCCAGGCTTaGGAGATCCTGCTTATAAAT +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRFLIQA*EILLIN
Trigger: ATTTATAAGCAGGATCTCCCAAGCCTGGATGAGAAA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCCAGATCAGAGATATTaGAAAAGGAACTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESPDQRY*KRNCIC
Trigger: ACAGATGCAGTTCCTTTTCCAATATCTCTGATCTGG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATACCAGATCAGAGATATTaGAAAAGGAACTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIPDQRY*KRNCIC
Trigger: ACAGATGCAGTTCCTTTTCCAATATCTCTGATCTGG...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCCAGATCAGAGATATTaGAAAAGGAACTGCATCTGT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVPDQRY*KRNCIC
Trigger: ACAGATGCAGTTCCTTTTCCAATATCTCTGATCTGG...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTCACTGTTGTCTTGCTaGACATTTTTATCAGTGTCT +
Preference number: 4 (lower is better)
Translates to: DISSIPHFHMTIYCIVRESLLSC*TFLSVS
Trigger: AGACACTGATAAAAATGTCCAGCAAGACAACAGTGA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAATATTTGGGCCATTTaGAGTTCTTTCCAGTTTGGG +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESNIWAI*SSFQFG
Trigger: CCCAAACTGGAAAGAACTCCAAATGGCCCAAATATT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTCACCATTCTGATGTaGAGGTTCAGCACCAAAATT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIFTILM*RFSTKI
Trigger: AATTTTGGTGCTGAACCTCCACATCAGAATGGTGAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGCTACCTGGTCTAGATaGAATGAAGTGTTAGCTTTA +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRATWSR*NEVLAL
Trigger: TAAAGCTAACACTTCATTCCATCTAGACCAGGTAGC...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAGCATTTATTCAAACTaGTGCATATCTTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNSIYSN*CISLRS
Trigger: GGATCTCAAAGATATGCACCAGTTTGAATAAATGCT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTGGAATCATTCTGATGTaGAGGTTCAGCACCAAAATT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESGIILM*RFSTKI
Trigger: AATTTTGGTGCTGAACCTCCACATCAGAATGATTCC...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000435381.5
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTATTGTTTGCATGAGTaGTTTGCTGATTTTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESYCLHE*FADFWL
Trigger: CAGCCAAAAATCAGCAAATCACTCATGCAAACAATA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAAGTTTGTTCCAACAGTaGATAAAGGGGTACTTCTAT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCISLFQQ*IKGYFY
Trigger: ATAGAAGTACCCCTTTATTCACTGTTGGAACAAACT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAGTTTGTTCCAACAGTaGATAAAGGGGTACTTCTAT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVSLFQQ*IKGYFY
Trigger: ATAGAAGTACCCCTTTATTCACTGTTGGAACAAACT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAGTTTGTTCCAACAGTaGATAAAGGGGTACTTCTAT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESSLFQQ*IKGYFY
Trigger: ATAGAAGTACCCCTTTATTCACTGTTGGAACAAACT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAAGACTCTTTTTAGCCTaGGCATTCATGACATTATTC +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIRLFLA*AFMTLF
Trigger: GAATAATGTCATGAATGCTCAGGCTAAAAAGAGTCT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR TCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTACAGAAAGCTTAGTATaGATTCACAATTCCACAGGA +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESTESLV*IHNSTG
Trigger: TCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTGCTGATTTTTGGCTaGAACTCCGATTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCILLIFG*NSDCSI
Trigger: AATAGAACAATCGGAGTTGCAGCCAAAAATCAGCAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTGCTGATTTTTGGCTaGAACTCCGATTGTTCTATT +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVLLIFG*NSDCSI
Trigger: AATAGAACAATCGGAGTTGCAGCCAAAAATCAGCAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAAGACACCGTATTGTTTaGATGAGTGATTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIRHRIV*MSDLLI
Trigger: AATCAGCAAATCACTCATGCAAACAATACGGTGTCT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAGACACCGTATTGTTTaGATGAGTGATTTGCTGATT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESRHRIV*MSDLLI
Trigger: AATCAGCAAATCACTCATGCAAACAATACGGTGTCT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAACATGGCTGTTATCTaGTCCACACTAAATAGATGT +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESNMAVI*STLNRC
Trigger: ACATCTATTTAGTGTGGAGCAGATAACAGCCATGTT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR GCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTCTCTAACTTTAAATaGCGGGGAAAGTATTGCACA +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESFSNFK*RGKYCT
Trigger: TGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTCTCTAACTTTAAATaGCGGGGAAAGTATTGCACA +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVFSNFK*RGKYCT
Trigger: TGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATTCTCTAACTTTAAATaGCGGGGAAAGTATTGCACA +
Preference number: 4 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRFSNFK*RGKYCT
Trigger: TGTGCAATACTTTCCCCGGCATTTAAAGTTAGAGAA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR GCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTATTGGAAAAGGAACTaGATCTGTGACGGAAAATTC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVYWKRN*ICDGKF
Trigger: GAATTTTCCGTCACAGATGCAGTTCCTTTTCCAATA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATCCACCATTTTTCAATaGAACCAAATCGTAACTCAA +
Preference number: 4 (lower is better)
Translates to: RHFFHSTLSHDNILYSERSTIFQ*NQIVTQ
Trigger: TTGAGTTACGATTTGGTTCCATTGAAAAATGGTGGA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAACACAATCTGTTACTaGTTTCTTGAGGCTGTTTTC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVNTICY*FLEAVF
Trigger: GAAAACAGCCTCAAGAAACCAGTAACAGATTGTGTT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
3UTR CAA 72 bp TTATCAATATTTGGGCCATTTGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGTTTCGGTTGTGTTACA +
Preference number: 4 (lower is better)
Translates to: LSIFGPFGVLSS*GDSIFGFGCVT
Trigger: TGTAACACAACCGAAACCAAAAATTGAATCACCCAAACTGGAAAGAACTCCAAATGGCCCAAATATTGATAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR GCA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAATTTATTCAAACTGGTaGATATCTTTGAGATCCTCG +
Preference number: 4 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIIYSNW*ISLRSS
Trigger: CGAGGATCTCAAAGATATGCACCAGTTTGAATAAAT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CCA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCCACCATTTTTCAATaGAACCAAATCGTAACTCAA +
Preference number: 4 (lower is better)
Translates to: FFHSTLSHDNILYSERESSTIFQ*NQIVTQ
Trigger: TTGAGTTACGATTTGGTTCCATTGAAAAATGGTGGA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTCCACCATTTTTCAATaGAACCAAATCGTAACTCAA +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVSTIFQ*NQIVTQ
Trigger: TTGAGTTACGATTTGGTTCCATTGAAAAATGGTGGA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
34% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CCA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAGCATTTATTCAAACTaGTGCATATCTTTGAGATCC +
Preference number: 4 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVSIYSN*CISLRS
Trigger: GGATCTCAAAGATATGCACCAGTTTGAATAAATGCT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS GCA 90 bp GAGAAAGCGGGGCTCAGCCTCCGCAGGTCGCTCCGCACCTCGGGTTaGCTGCCTCACTCTGCCGCGGCTCGCACACCGGCGCCGGCGCTG +
Preference number: 5 (lower is better)
Translates to: EKAGLSLRRSLRTSG*LPHSAAARTPAPAL
Trigger: CAGCGCCGGCGCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGCGACCTGCGGAGGCTGAGCCCCGCTTTCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS GCA 90 bp CAGCCTCCGCAGGTCGCTCCGCACCTCGGGTTGCCTGCCTCACTCTaGCGCGGCTCGCACACCGGCGCCGGCGCTGAACTACCGACCCAA +
Preference number: 5 (lower is better)
Translates to: QPPQVAPHLGLPASL*RGSHTGAGAELPTQ
Trigger: TTGGGTCGGTAGTTCAGCGCCGGCGCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGCGACCTGCGGAGGCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000380405.7
ENST00000602786.5
CDS TCA 90 bp CCCTGGCCGCGTTCTGCTCCGGCCCGCGGGGTCTGGCCGTTCCTCTaGCACTCAGAAGGACACACAGACAGCCGCGGCCTGTCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: PWPRSAPARGVWPFL*HSEGHTDSRGLSGA
Trigger: GGCTCCTGACAGGCCGCGGCTGTCTGTGTGTCCTTCTGAGTGTCAGAGGAACGGCCAGACCCCGCGGGCCGGAGCAGAACGCGGCCAGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS GCA 90 bp AGATTCTACCCAATGGGCAGCCGGTCCCCGGAGAACGGCCGCCGTTaGCATGGCAGCGACAGGGCCGCTCCCGTGCCATTGGCTCAAACC +
Preference number: 5 (lower is better)
Translates to: RFYPMGSRSPENGRR*HGSDRAAPVPLAQT
Trigger: GGTTTGAGCCAATGGCACGGGAGCGGCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTCCGGGGACCGGCTGCCCATTGGGTAGAATCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS CCA 90 bp CGGCCCCTCCACGTGCCACTTCCGCTTCCTTCTTCTCGAGCCTTCTaGAAAGATTCTACCCAATGGGCAGCCGGTCCCCGGAGAACGGCC +
Preference number: 5 (lower is better)
Translates to: RPLHVPLPLPSSRAF*KDSTQWAAGPRRTA
Trigger: GGCCGTTCTCCGGGGACCGGCTGCCCATTGGGTAGAATCTTTCCAGAAGGCTCGAGAAGAAGGAAGCGGAAGTGGCACGTGGAGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS CCA 90 bp CTTCCGCTTCCTTCTTCTCGAGCCTTCTGGAAAGATTCTACCCAATaGGCAGCCGGTCCCCGGAGAACGGCCGCCGTTGCCATGGCAGCG +
Preference number: 5 (lower is better)
Translates to: LPLPSSRAFWKDSTQ*AAGPRRTAAVAMAA
Trigger: CGCTGCCATGGCAACGGCGGCCGTTCTCCGGGGACCGGCTGCCCATTGGGTAGAATCTTTCCAGAAGGCTCGAGAAGAAGGAAGCGGAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCCCTAACTGCCAGACCAAGTTGGCTTCAATAGGCAGCTCAACATTCACCACCGCTCCGCACCTCGGGTaGCCTGCCTCACTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: FPNCQTKLASIGSSTFTTAPHLG*PASLCR
Trigger: GCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGC...GGTGGTGAATGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGGGAGAACGGCCGCCGTaGCCATGGCAGCGACAGGGC +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKGERPP*PWQRQG
Trigger: GCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTCC...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGCTCCGCACCTCGGGTaGCCTGCCTCACTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREAPHLG*PASLCR
Trigger: GCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGCTCCGCACCTCGGGTaGCCTGCCTCACTCTGCCGC +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPAPHLG*PASLCR
Trigger: GCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS-3UTR CAA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGTGTCCGGAGAGCATGTaGGGAATCGTAGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMCPESM*GIVVPL
Trigger: CAGCGGGACTACGATTCCCAACATGCTCTCCGGACA...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445273.6
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGGAGAACGGCCGCCGTaGCCATGGCAGCGACAGGGC +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREGERPP*PWQRQG
Trigger: GCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTCC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGCCGCTCCCGTGCCATaGGCTCAAACCTGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSAAPVP*AQTCLR
Trigger: GCGGAGGCAGGTTTGAGCCAATGGCACGGGAGCGGC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCCGCTCCCGTGCCATaGGCTCAAACCTGCCTCCGC +
Preference number: 5 (lower is better)
Translates to: RHFFHSTLSHDNILYSERAAPVP*AQTCLR
Trigger: GCGGAGGCAGGTTTGAGCCAATGGCACGGGAGCGGC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCATTCTCCTCAGTTGGGACTTTCTCCACCATAGATGCCGTAGAGATGGTGAAATGCCGGGGAAAGTATaGCACACTGTAATGCACATC +
Preference number: 5 (lower is better)
Translates to: FILLSWDFLHHRCRRDGEMPGKV*HTVMHI
Trigger: GATGTGCATTACAGTGTGCAATACTTTCCCCGGCAT...TTCACCATCTCTACGGCATCTATGGTGGAGAAAGTCCCAACTGAGGAGAATGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp GTTCAGGTGAAGGGGGAGACTGTGAGGTTTGTTGAGCATCAGTTTGTACCTGGGAGCTTCACTGTTGTCTaGCTGGACATTTTTATCAGT +
Preference number: 5 (lower is better)
Translates to: VQVKGETVRFVEHQFVPGSFTVV*LDIFIS
Trigger: ACTGATAAAAATGTCCAGCAAGACAACAGTGAAGCT...CCCAGGTACAAACTGATGCTCAACAAACCTCACAGTCTCCCCCTTCACCTGAAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGGGGTACTTCTATCTTTaGCAGAAGTTCAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMGYFYL*QKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCC...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAACTGCCAGACCAAGTaGGCTTCAATAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKNCQTK*ASIGSS
Trigger: TGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS GCA 90 bp CTTACCTCTGTCTCAATATACATGTTAAGAAGGTCTTTCCCTAACTaGCAGACCAAGTTGGCTTCAATAGGCAGCTCAACATTCACCACC +
Preference number: 5 (lower is better)
Translates to: LTSVSIYMLRRSFPN*QTKLASIGSSTFTT
Trigger: GGTGGTGAATGTTGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTTAGGGAAAGACCTTCTTAACATGTATATTGAGACAGAGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000626866.2
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGATGCCGGGGAAAGTATaGCACACTGTAATGCACATC +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKMPGKV*HTVMHI
Trigger: GATGTGCATTACAGTGTGCAATACTTTCCCCGGCAT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATAGGCAGCTCAACATTCACCACCTTTATTTTGGGCTTTTTAGCTTCTGGAGGCTATGGTCCACACAGCTaGTCTCTGAACTCATACACA +
Preference number: 5 (lower is better)
Translates to: IGSSTFTTFILGFLASGGYGPHS*SLNSYT
Trigger: TGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATA...GCCTCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAATGTTGAGCTGCCTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGGTGGAAGAGGGAAAGTaGGCCCTCATCAAGATCATA +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKVEEGK*ALIKII
Trigger: TATGATCTTGATGAGGGCCAACTTTCCCTCTTCCAC...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATGTCCGGAGAGCATGTaGGGAATCGTAGTCCCGCTG +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRCPESM*GIVVPL
Trigger: CAGCGGGACTACGATTCCCAACATGCTCTCCGGACA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGGGGTACTTCTATCTTTaGCAGAAGTTCAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKGYFYL*QKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCC...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGAGCTTCACTGTTGTCTaGCTGGACATTTTTATCAGT +
Preference number: 5 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMSFTVV*LDIFIS
Trigger: ACTGATAAAAATGTCCAGCAAGACAACAGTGAAGCT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTAGTGAGGAGCTGGTaGTCACCTATCCTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNLVRSW*SPILSA
Trigger: TGCACTTAGGATAGGTGACAACCAGCTCCTCACTAG...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAAACTGCCAGACCAAGTaGGCTTCAATAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: RHFFHSTLSHDNILYSERNCQTK*ASIGSS
Trigger: TGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAACTGCCAGACCAAGTaGGCTTCAATAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPNCQTK*ASIGSS
Trigger: TGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGACGGGTTCACATGTGTaGTTCAATTCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMTGSHV*FNSLIF
Trigger: AAAAATCAAGGAATTGAACAACACATGTGAACCCGT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGCAATATTTGGGCCATTaGGAGTTCTTTCCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKQYLGH*EFFPVW
Trigger: CCAAACTGGAAAGAACTCCAAATGGCCCAAATATTG...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AATAAACTGTTGCACCCTAGTGAGGAGCTGGTTGTCACCTATCCTAAGTGCATGAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 5 (lower is better)
Translates to: NKLLHPSEELVVTYPKCMKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...CATGCACTTAGGATAGGTGACAACCAGCTCCTCACTAGGGTGCAACAGTTTATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTCTAGTGAGGAGCTGGTaGTCACCTATCCTAAGTGCA +
Preference number: 5 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVLVRSW*SPILSA
Trigger: TGCACTTAGGATAGGTGACAACCAGCTCCTCACTAG...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTATGCCGGGGAAAGTATaGCACACTGTAATGCACATC +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSMPGKV*HTVMHI
Trigger: GATGTGCATTACAGTGTGCAATACTTTCCCCGGCAT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTATGCCGGGGAAAGTATaGCACACTGTAATGCACATC +
Preference number: 5 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVMPGKV*HTVMHI
Trigger: GATGTGCATTACAGTGTGCAATACTTTCCCCGGCAT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTGGATATGGAACTCCTaGGGGATCAGAATAGAAAGC +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNWIWNS*GIRIES
Trigger: GCTTTCTATTCTGATCCCCAAGGAGTTCCATATCCA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTTCACCACCTTTATTTaGGGCTTTTTAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKFTTFI*GFLASG
Trigger: TCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAATTCACCACCTTTATTTaGGGCTTTTTAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIEFTTFI*GFLASG
Trigger: TCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAA...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAACTGCCAGACCAAGTaGGCTTCAATAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVNCQTK*ASIGSS
Trigger: TGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATTCAATTTTTGGTTTCGGTTGTGTTACAACGGGTTCACATGTGTTGTTCAATTAACTGCCAGACCAAGTaGGCTTCAATAGGCAGCTCA +
Preference number: 5 (lower is better)
Translates to: IQFLVSVVLQRVHMCCSINCQTK*ASIGSS
Trigger: TGAGCTGCCTATTGAAGCCAACTTGGTCTGGCAGTT...AATTGAACAACACATGTGAACCCGTTGTAACACAACCGAAACCAAAAATTGAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGATATGCTTGTTTAGCTaGGTCCTCTCCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKICLFS*VLSFFI
Trigger: TATGAAGAAGGAGAGGACCAAGCTAAACAAGCATAT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AAAGCGGCCTATTTTTGCTTCTGGATATGGAACTCCTTGGGGATCAGAATAGAAAATTTTTGGTTTCGGTaGTGTTACAACGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: KAAYFCFWIWNSLGIRIENFWFR*CYNGFT
Trigger: TGTGAACCCGTTGTAACACAACCGAAACCAAAAATT...TTCTATTCTGATCCCCAAGGAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp ATAGGCAGCTCAACATTCACCACCTTTATTTTGGGCTTTTTAGCTTCTGGAGGCTGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAA +
Preference number: 5 (lower is better)
Translates to: IGSSTFTTFILGFLASGGWVIQF*VSVVLQ
Trigger: TTGTAACACAACCGAAACCAAAAATTGAATCACCCA...GCCTCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAATGTTGAGCTGCCTAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGTTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKLITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTGGAAGAGGGAAAGTaGGCCCTCATCAAGATCATA +
Preference number: 5 (lower is better)
Translates to: RHFFHSTLSHDNILYSERVEEGK*ALIKII
Trigger: TATGATCTTGATGAGGGCCAACTTTCCCTCTTCCAC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAACATGACAATACTTTaGCCCGCATCCAAAAGCGCA +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNNMTIL*PASKSA
Trigger: TGCGCTTTTGGATGCGGGCAAAAGTATTGTCATGTT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTCTGTTACTGGTTTCTaGAGGCTGTTTTCAGCAGTT +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNSVTGF*RLFSAV
Trigger: AACTGCTGAAAACAGCCTCAAGAAACCAGTAACAGA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAGGAGTGCTCGTATTTaGGATTTTGCATCCAACTTG +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNRSARI*DFASNL
Trigger: CAAGTTGGATGCAAAATCCAAAATACGAGCACTCCT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTGGGTACTTCTATCTTTaGCAGAAGTTCAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVGYFYL*QKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCC...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGGGTACTTCTATCTTTaGCAGAAGTTCAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPGYFYL*QKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTATGCCGGGGAAAGTATaGCACACTGTAATGCACATC +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVMPGKV*HTVMHI
Trigger: GATGTGCATTACAGTGTGCAATACTTTCCCCGGCAT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTTGGATATGGAACTCCTaGGGGATCAGAATAGAAAGC +
Preference number: 5 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVWIWNS*GIRIES
Trigger: GCTTTCTATTCTGATCCCCAAGGAGTTCCATATCCA...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATGGATATGGAACTCCTaGGGGATCAGAATAGAAAGC +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPWIWNS*GIRIES
Trigger: GCTTTCTATTCTGATCCCCAAGGAGTTCCATATCCA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCACAAAGCGGCCTATTTTaGCTTCTGGATATGGAACTC +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPQSGLF*LLDMEL
Trigger: GAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTTG...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGCAAAGCGGCCTATTTTaGCTTCTGGATATGGAACTC +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREQSGLF*LLDMEL
Trigger: GAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTTG...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GAGTTTGTTCCAACAGTGAATAAAGGGGTACTTCTATCTTTTGCAGAAGTTCAGGTTCCAGCTTCACTGTaGTCTTGCTGGACATTTTTA +
Preference number: 5 (lower is better)
Translates to: EFVPTVNKGVLLSFAEVQVPASL*SCWTFL
Trigger: TAAAAATGTCCAGCAAGACAACAGTGAAGCTGGAAC...CTGAACTTCTGCAAAAGATAGAAGTACCCCTTTATTCACTGTTGGAACAAACTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000602786.5
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTATGGTCCACACAGCTaGTCTCTGAACTCATACACA +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSYGPHS*SLNSYT
Trigger: TGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACAAAAGTCAGTTTCATCCTCAGTGATGCAAATGGTGAGACTGCACAGAAAGAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 5 (lower is better)
Translates to: RQKSVSSSVMQMVRLHRKKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...CTTTCTGTGCAGTCTCACCATTTGCATCACTGAGGATGAAACTGACTTTTGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAACATGACAATACTTTaGCCCGCATCCAAAAGCGCA +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPNMTIL*PASKSA
Trigger: TGCGCTTTTGGATGCGGGCAAAAGTATTGTCATGTT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAGGAGTGCTCGTATTTaGGATTTTGCATCCAACTTG +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVRERSARI*DFASNL
Trigger: CAAGTTGGATGCAAAATCCAAAATACGAGCACTCCT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGGGTACTTCTATCTTTaGCAGAAGTTCAGCACAGAG +
Preference number: 5 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIGYFYL*QKFSTE
Trigger: CTCTGTGCTGAACTTCTGCAAAAGATAGAAGTACCC...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATGGATATGGAACTCCTaGGGGATCAGAATAGAAAGC +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRWIWNS*GIRIES
Trigger: GCTTTCTATTCTGATCCCCAAGGAGTTCCATATCCA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCAAAGCGGCCTATTTTaGCTTCTGGATATGGAACTC +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESQSGLF*LLDMEL
Trigger: GAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTTG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACAAAGCGGCCTATTTTaGCTTCTGGATATGGAACTC +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRQSGLF*LLDMEL
Trigger: GAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTTG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTCAAAGCGGCCTATTTTaGCTTCTGGATATGGAACTC +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVQSGLF*LLDMEL
Trigger: GAGTTCCATATCCAGAAGCAAAAATAGGCCGCTTTG...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGTTCCAGCTTCACTGTaGTCTTGCTGGACATTTTTA +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSVPASL*SCWTFL
Trigger: TAAAAATGTCCAGCAAGACAACAGTGAAGCTGGAAC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTCCAGCTTCACTGTaGTCTTGCTGGACATTTTTA +
Preference number: 5 (lower is better)
Translates to: RHFFHSTLSHDNILYSERVPASL*SCWTFL
Trigger: TAAAAATGTCCAGCAAGACAACAGTGAAGCTGGAAC...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTATGGTCCACACAGCTaGTCTCTGAACTCATACACA +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVYGPHS*SLNSYT
Trigger: TGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTATGGTCCACACAGCTaGTCTCTGAACTCATACACA +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESYGPHS*SLNSYT
Trigger: TGTGTATGAGTTCAGAGACAAGCTGTGTGGACCATA...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNGVLSS*GDSIFG
Trigger: ACCAAAAATTGAATCACCCAAACTGGAAAGAACTCC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTCAATATTTGGGCCATTaGGAGTTCTTTCCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSQYLGH*EFFPVW
Trigger: CCAAACTGGAAAGAACTCCAAATGGCCCAAATATTG...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTCTAAGATTAATCCCTaGTGGAAGAGGGAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSSKINP*WKRESW
Trigger: CCAACTTTCCCTCTTCCACAAGGGATTAATCTTAGA...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATAACTGGTGCATATCTTaGAGATCCTCGATGATTACT +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNNWCIS*RSSMIT
Trigger: AGTAATCATCGAGGATCTCAAAGATATGCACCAGTT...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGATCTGTTACTGGTTTCTaGAGGCTGTTTTCAGCAGTT +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRSVTGF*RLFSAV
Trigger: AACTGCTGAAAACAGCCTCAAGAAACCAGTAACAGA...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000630972.2
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAAGGAGTGCTCGTATTTaGGATTTTGCATCCAACTTG +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRRSARI*DFASNL
Trigger: CAAGTTGGATGCAAAATCCAAAATACGAGCACTCCT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTAGGAGTGCTCGTATTTaGGATTTTGCATCCAACTTG +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESRSARI*DFASNL
Trigger: CAAGTTGGATGCAAAATCCAAAATACGAGCACTCCT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAACTGCTTCATCTGCATaGAGTGTTGTGCTAATATCT +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPTASSA*SVVLIS
Trigger: AGATATTAGCACAACACTCAATGCAGATGAAGCAGT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGACTGCTTCATCTGCATaGAGTGTTGTGCTAATATCT +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVRETASSA*SVVLIS
Trigger: AGATATTAGCACAACACTCAATGCAGATGAAGCAGT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATGTGTTGACTCGCACTTaGACTTTTACTCTAGATTTT +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNVLTRT*TFTLDF
Trigger: AAAATCTAGAGTAAAAGTCAAAGTGCGAGTCAACAC...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTAGCTTCACTGTTGTCTaGCTGGACATTTTTATCAGT +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSSFTVV*LDIFIS
Trigger: ACTGATAAAAATGTCCAGCAAGACAACAGTGAAGCT...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAGCTTCACTGTTGTCTaGCTGGACATTTTTATCAGT +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPSFTVV*LDIFIS
Trigger: ACTGATAAAAATGTCCAGCAAGACAACAGTGAAGCT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTTCCAGCTTCACTGTaGTCTTGCTGGACATTTTTA +
Preference number: 5 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIVPASL*SCWTFL
Trigger: TAAAAATGTCCAGCAAGACAACAGTGAAGCTGGAAC...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000320027.10
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATTCACCACCTTTATTTaGGGCTTTTTAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPFTTFI*GFLASG
Trigger: TCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTCACCACCTTTATTTaGGGCTTTTTAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREFTTFI*GFLASG
Trigger: TCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGATATGCTTGTTTAGCTaGGTCCTCTCCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREICLFS*VLSFFI
Trigger: TATGAAGAAGGAGAGGACCAAGCTAAACAAGCATAT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTATATGCTTGTTTAGCTaGGTCCTCTCCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVICLFS*VLSFFI
Trigger: TATGAAGAAGGAGAGGACCAAGCTAAACAAGCATAT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAATATGCTTGTTTAGCTaGGTCCTCTCCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPICLFS*VLSFFI
Trigger: TATGAAGAAGGAGAGGACCAAGCTAAACAAGCATAT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAATTTTTGGTTTCGGTaGTGTTACAACGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVRENFWFR*CYNGFT
Trigger: TGTGAACCCGTTGTAACACAACCGAAACCAAAAATT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAATTTTTGGTTTCGGTaGTGTTACAACGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPNFWFR*CYNGFT
Trigger: TGTGAACCCGTTGTAACACAACCGAAACCAAAAATT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAAATGGTGAGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATTGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAA +
Preference number: 5 (lower is better)
Translates to: QMVRLHRKLSMNSQFHRNWVIQF*VSVVLQ
Trigger: TTGTAACACAACCGAAACCAAAAATTGAATCACCCA...ATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCTCACCATTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSGVLSS*GDSIFG
Trigger: ACCAAAAATTGAATCACCCAAACTGGAAAGAACTCC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPGVLSS*GDSIFG
Trigger: ACCAAAAATTGAATCACCCAAACTGGAAAGAACTCC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREGVLSS*GDSIFG
Trigger: ACCAAAAATTGAATCACCCAAACTGGAAAGAACTCC...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGACAATATTTGGGCCATTaGGAGTTCTTTCCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRQYLGH*EFFPVW
Trigger: CCAAACTGGAAAGAACTCCAAATGGCCCAAATATTG...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTCAATATTTGGGCCATTaGGAGTTCTTTCCAGTTTGG +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESQYLGH*EFFPVW
Trigger: CCAAACTGGAAAGAACTCCAAATGGCCCAAATATTG...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGATTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: RHFFHSTLSHDNILYSERLITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVRELITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTCTAAGATTAATCCCTaGTGGAAGAGGGAAAGTTGG +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVSKINP*WKRESW
Trigger: CCAACTTTCCCTCTTCCACAAGGGATTAATCTTAGA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTACTGCTTCATCTGCATaGAGTGTTGTGCTAATATCT +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVTASSA*SVVLIS
Trigger: AGATATTAGCACAACACTCAATGCAGATGAAGCAGT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAACTGCTTCATCTGCATaGAGTGTTGTGCTAATATCT +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRTASSA*SVVLIS
Trigger: AGATATTAGCACAACACTCAATGCAGATGAAGCAGT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGTGTTGACTCGCACTTaGACTTTTACTCTAGATTTT +
Preference number: 5 (lower is better)
Translates to: QDRHFFHSTLSHDNILYSVLTRT*TFTLDF
Trigger: AAAATCTAGAGTAAAAGTCAAAGTGCGAGTCAACAC...ACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAGTGTTGACTCGCACTTaGACTTTTACTCTAGATTTT +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPVLTRT*TFTLDF
Trigger: AAAATCTAGAGTAAAAGTCAAAGTGCGAGTCAACAC...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATTCACCACCTTTATTTaGGGCTTTTTAGCTTCTGGA +
Preference number: 5 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIFTTFI*GFLASG
Trigger: TCCAGAAGCTAAAAAGCCCAAAATAAAGGTGGTGAA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTATATGCTTGTTTAGCTaGGTCCTCTCCTTCTTCATA +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESICLFS*VLSFFI
Trigger: TATGAAGAAGGAGAGGACCAAGCTAAACAAGCATAT...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGACGGGTTCACATGTGTaGTTCAATTCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVRETGSHV*FNSLIF
Trigger: AAAAATCAAGGAATTGAACAACACATGTGAACCCGT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAACGGGTTCACATGTGTaGTTCAATTCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: RHFFHSTLSHDNILYSERTGSHV*FNSLIF
Trigger: AAAAATCAAGGAATTGAACAACACATGTGAACCCGT...TCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAATTTTTGGTTTCGGTaGTGTTACAACGGGTTCACA +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVNFWFR*CYNGFT
Trigger: TGTGAACCCGTTGTAACACAACCGAAACCAAAAATT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGTGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAA +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREWVIQF*VSVVLQ
Trigger: TTGTAACACAACCGAAACCAAAAATTGAATCACCCA...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCATGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAA +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPWVIQF*VSVVLQ
Trigger: TTGTAACACAACCGAAACCAAAAATTGAATCACCCA...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESGVLSS*GDSIFG
Trigger: ACCAAAAATTGAATCACCCAAACTGGAAAGAACTCC...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTGGAGTTCTTTCCAGTTaGGGTGATTCAATTTTTGGT +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVGVLSS*GDSIFG
Trigger: ACCAAAAATTGAATCACCCAAACTGGAAAGAACTCC...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTTTAATCACAGCCCTCTaGAACAAGCAGTACAGTTTT +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVLITAL*NKQYSF
Trigger: AAAACTGTACTGCTTGTTCAAGAGGGCTGTGATTAA...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp CTCATAAAAGTGTTCACAATCAGTTACAACAGGATCGACATTTCTTCCATTCCAAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 5 (lower is better)
Translates to: LIKVFTISYNRIDISSIPKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...TGGAATGGAAGAAATGTCGATCCTGTTGTAACTGATTGTGAACACTTTTATGAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AGACTGCACAGAAAGCTTAGTATGAATTCACAATTCCACAGGAATCTGAAAGTTAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 5 (lower is better)
Translates to: RLHRKLSMNSQFHRNLKVKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...AACTTTCAGATTCCTGTGGAATTGTGAATTCATACTAAGCTTTCTGTGCAGTCT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp GACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 5 (lower is better)
Translates to: DISSIPHFHMTIYCIVREKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...CTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAAACTGGTGCATATCTTaGAGATCCTCGATGATTACT +
Preference number: 5 (lower is better)
Translates to: NRIDISSIPHFHMTIYCINWCIS*RSSMIT
Trigger: AGTAATCATCGAGGATCTCAAAGATATGCACCAGTT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000320027.10
ENST00000445273.6
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGTGTTGACTCGCACTTaGACTTTTACTCTAGATTTT +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRVLTRT*TFTLDF
Trigger: AAAATCTAGAGTAAAAGTCAAAGTGCGAGTCAACAC...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTGTGTTGACTCGCACTTaGACTTTTACTCTAGATTTT +
Preference number: 5 (lower is better)
Translates to: FFHSTLSHDNILYSERESVLTRT*TFTLDF
Trigger: AAAATCTAGAGTAAAAGTCAAAGTGCGAGTCAACAC...ACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp ATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAACGGGTTCACATGTGTaGTTCAATTCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: IDISSIPHFHMTIYCIVRTGSHV*FNSLIF
Trigger: AAAAATCAAGGAATTGAACAACACATGTGAACCCGT...TCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATAACGGGTTCACATGTGTaGTTCAATTCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: NRIDISSIPHFHMTIYCITGSHV*FNSLIF
Trigger: AAAAATCAAGGAATTGAACAACACATGTGAACCCGT...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTACGGGTTCACATGTGTaGTTCAATTCCTTGATTTTT +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVTGSHV*FNSLIF
Trigger: AAAAATCAAGGAATTGAACAACACATGTGAACCCGT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp AACAGGATCGACATTTCTTCCATTCCACACTTTCACATGACAATATACTGTATATGGGTGATTCAATTTTaGGTTTCGGTTGTGTTACAA +
Preference number: 5 (lower is better)
Translates to: NRIDISSIPHFHMTIYCIWVIQF*VSVVLQ
Trigger: TTGTAACACAACCGAAACCAAAAATTGAATCACCCA...TATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGAAATGTCGATCCTGTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS-3UTR CAA 90 bp TCTTCCATTCCACACTTTCACATGACAATATACTGTATAGTGAGAGAGAAAGTTAAGTCAGACTTAGTCTaGTTTATAAACATCCACACC +
Preference number: 5 (lower is better)
Translates to: SSIPHFHMTIYCIVREKVKSDLV*FINIHT
Trigger: GGTGTGGATGTTTATAAACAAGACTAAGTCTGACTT...AACTTTCTCTCTCACTATACAGTATATTGTCATGTGAAAGTGTGGAATGGAAGA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000435381.5
ENST00000445273.6
ENST00000602786.5
ENST00000630972.2
CDS CAA 90 bp GGAGAAAGCGGGGCTCAGCCTCCGCAGGTCGCTCCGCACCTCGGGTaGCCTGCCTCACTCTGCCGCGGCTCGCACACCGGCGCCGGCGCT +
Preference number: 6 (lower is better)
Translates to: GESGAQPPQVAPHLG*PASLCRGSHTGAGA
Trigger: AGCGCCGGCGCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGCGACCTGCGGAGGCTGAGCCCCGCTTTCTCC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS GCA 72 bp CAGGTCGCTCCGCACCTCGGGTTGCCTGCCTCACTCTaGCGCGGCTCGCACACCGGCGCCGGCGCTGAACTA +
Preference number: 6 (lower is better)
Translates to: QVAPHLGLPASL*RGSHTGAGAEL
Trigger: TAGTTCAGCGCCGGCGCCGGTGTGCGAGCCGCGGCAGAGTGAGGCAGGCAACCCGAGGTGCGGAGCGACCTG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS GCA 72 bp TCGGTCTGCGTCCTCCGGCCCCCTGCCTGCTTCTCCTaGCGCCGCTTTCTGCCCTGGCCGCGTTCTGCTCCG +
Preference number: 6 (lower is better)
Translates to: SVCVLRPPACFS*RRFLPWPRSAP
Trigger: CGGAGCAGAACGCGGCCAGGGCAGAAAGCGGCGGCAGGAGAAGCAGGCAGGGGGCCGGAGGACGCAGACCGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS GCA 72 bp CCAATGGGCAGCCGGTCCCCGGAGAACGGCCGCCGTTaGCATGGCAGCGACAGGGCCGCTCCCGTGCCATTG +
Preference number: 6 (lower is better)
Translates to: PMGSRSPENGRR*HGSDRAAPVPL
Trigger: CAATGGCACGGGAGCGGCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTCCGGGGACCGGCTGCCCATTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS CCA 72 bp GTTGCCATGGCAGCGACAGGGCCGCTCCCGTGCCATTaGCTCAAACCTGCCTCCGCCCACTCCCGCCCTAGC +
Preference number: 6 (lower is better)
Translates to: VAMAATGPLPCH*LKPASAHSRPS
Trigger: GCTAGGGCGGGAGTGGGCGGAGGCAGGTTTGAGCCAATGGCACGGGAGCGGCCCTGTCGCTGCCATGGCAAC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS TCA 72 bp CGTTCTGCTCCGGCCCGCGGGGTCTGGCCGTTCCTCTaGCACTCAGAAGGACACACAGACAGCCGCGGCCTG +
Preference number: 6 (lower is better)
Translates to: RSAPARGVWPFL*HSEGHTDSRGL
Trigger: CAGGCCGCGGCTGTCTGTGTGTCCTTCTGAGTGTCAGAGGAACGGCCAGACCCCGCGGGCCGGAGCAGAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000602786.5
CDS TCA 72 bp CTCACTCTGCCGCGGCTCGCACACCGGCGCCGGCGCTaGACTACCGACCCAAAAGGGGAGGTCCCACTTCCT +
Preference number: 6 (lower is better)
Translates to: LTLPRLAHRRRR*TTDPKGEVPLP
Trigger: AGGAAGTGGGACCTCCCCTTTTGGGTCGGTAGTTCAGCGCCGGCGCCGGTGTGCGAGCCGCGGCAGAGTGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000380405.7
ENST00000602786.5
CDS CAA 90 bp AAGATTCTACCCAATGGGCAGCCGGTCCCCGGAGAACGGCCGCCGTaGCCATGGCAGCGACAGGGCCGCTCCCGTGCCATTGGCTCAAAC +
Preference number: 6 (lower is better)
Translates to: KILPNGQPVPGERPP*PWQRQGRSRAIGSN
Trigger: GTTTGAGCCAATGGCACGGGAGCGGCCCTGTCGCTGCCATGGCAACGGCGGCCGTTCTCCGGGGACCGGCTGCCCATTGGGTAGAATCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS CCA 72 bp CCTTCTTCTCGAGCCTTCTGGAAAGATTCTACCCAATaGGCAGCCGGTCCCCGGAGAACGGCCGCCGTTGCC +
Preference number: 6 (lower is better)
Translates to: PSSRAFWKDSTQ*AAGPRRTAAVA
Trigger: GGCAACGGCGGCCGTTCTCCGGGGACCGGCTGCCCATTGGGTAGAATCTTTCCAGAAGGCTCGAGAAGAAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS CCA 72 bp CACGTGCCACTTCCGCTTCCTTCTTCTCGAGCCTTCTaGAAAGATTCTACCCAATGGGCAGCCGGTCCCCGG +
Preference number: 6 (lower is better)
Translates to: HVPLPLPSSRAF*KDSTQWAAGPR
Trigger: CCGGGGACCGGCTGCCCATTGGGTAGAATCTTTCCAGAAGGCTCGAGAAGAAGGAAGCGGAAGTGGCACGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445273.6
ENST00000630972.2
CDS GCA 72 bp AAAGGCTTGTTGCTGACTGATCTCAGCCGGCCACGTTaGTCATACTATAGAGCAAAGACCATGCTGTATTTA +
Preference number: 6 (lower is better)
Translates to: KGLLLTDLSRPR*SYYRAKTMLYL
Trigger: TAAATACAGCATGGTCTTTGCTCTATAGTATGAGCAACGTGGCCGGCTGAGATCAGTCAGCAACAAGCCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000629751.1
CDS TCA 72 bp TCATTTGCATCAGTGTCTGGGTTTTCTGGTGGTCTCTaGTTCAGACACTCCATGTCAGCTTCAGAAGACATT +
Preference number: 6 (lower is better)
Translates to: SFASVSGFSGGL*FRHSMSASEDI
Trigger: AATGTCTTCTGAAGCTGACATGGAGTGTCTGAATCAGAGACCACCAGAAAACCCAGACACTGATGCAAATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000380405.7
CDS GCA 72 bp GTTTCCTTCAGCTTAGTCAACAACATGGCTGTTATCTaGTCCACACTAAATAGATGTTCTTCACCCATGTAC +
Preference number: 6 (lower is better)
Translates to: VSFSLVNNMAVI*STLNRCSSPMY
Trigger: GTACATGGGTGAAGAACATCTATTTAGTGTGGAGCAGATAACAGCCATGTTGTTGACTAAGCTGAAGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000320027.10
ENST00000380405.7
ENST00000445273.6
ENST00000629751.1
ENST00000630972.2
CDS TCA 72 bp AGCTTAAAGTCACAACACTTAACGTGTTTTGGACACTaGGTTCCAATGTATGACTTTACCTTCAATTTTCCC +
Preference number: 6 (lower is better)
Translates to: SLKSQHLTCFGH*VPMYDFTFNFP
Trigger: GGGAAAATTGAAGGTAAAGTCATACATTGGAACTCAGTGTCCAAAACACGTTAAGTGTTGTGACTTTAAGCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000626866.2