Pregenerated sensors for HSPE1 (Homo sapiens)
Ensembl gene IDs: ENSG00000115541Ensembl transcript IDs: ENST00000463841.1, ENST00000465573.1, ENST00000495200.1
Found 14 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS GCA 90 bp | AGCCCTGGGGGAGAAAAGGGTCGGGCGGGCCTTGCCGCTCCAAGGTaGCATCGGGCGCTGGTCACTGAGTGGCCACCAATCCCTCCCGCC | + |
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Preference number: 5 (lower is better) Translates to: SPGGEKGRAGLAAPR*HRALVTEWPPIPPA Trigger: GGCGGGAGGGATTGGTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGCCCGACCCTTTTCTCCCCCAGGGCT 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS TCA 90 bp | TCGGGCGGGCCTTGCCGCTCCAAGGTGCCATCGGGCGCTGGTCACTaGGTGGCCACCAATCCCTCCCGCCCAGCCCAACAAAAGAGGGGC | + |
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Preference number: 5 (lower is better) Translates to: SGGPCRSKVPSGAGH*VATNPSRPAQQKRG Trigger: GCCCCTCTTTTGTTGGGCTGGGCGGGAGGGATTGGTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGCCCGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS CCA 90 bp | GCGGGCCTTGCCGCTCCAAGGTGCCATCGGGCGCTGGTCACTGAGTaGCCACCAATCCCTCCCGCCCAGCCCAACAAAAGAGGGGCGTCA | + |
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Preference number: 5 (lower is better) Translates to: AGLAAPRCHRALVTE*PPIPPAQPNKRGAS Trigger: TGACGCCCCTCTTTTGTTGGGCTGGGCGGGAGGGATTGGTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS CCA 90 bp | AAAAGGGTCGGGCGGGCCTTGCCGCTCCAAGGTGCCATCGGGCGCTaGTCACTGAGTGGCCACCAATCCCTCCCGCCCAGCCCAACAAAA | + |
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Preference number: 5 (lower is better) Translates to: KRVGRALPLQGAIGR*SLSGHQSLPPSPTK Trigger: TTTTGTTGGGCTGGGCGGGAGGGATTGGTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGCCCGACCCTTTT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS TCA 90 bp | AGAAATTTTCAGGAAACGCTGGGTCAAGCTCCCTGCCTGGCACCATaGTTTTTACCCAAGATATTACACATCCACAAAGGCCCTGCAGAA | + |
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Preference number: 5 (lower is better) Translates to: RNFQETLGQAPCLAP*FLPKILHIHKGPAE Trigger: TTCTGCAGGGCCTTTGTGGATGTGTAATATCTTGGGTAAAAATCATGGTGCCAGGCAGGGAGCTTGACCCAGCGTTTCCTGAAAATTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000465573.1 ENST00000495200.1 |
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| CDS TCA 90 bp | AACAGGCAACGCCACCGTGCTATACATCTCAACACGTTTTGGCTTTaGAAGTTAACACCAAACCTCAGCTTATTCGTTAAGGAAGCGCAT | + |
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Preference number: 5 (lower is better) Translates to: NRQRHRAIHLNTFWL*KLTPNLSLFVKEAH Trigger: ATGCGCTTCCTTAACGAATAAGCTGAGGTTTGGTGTTAACTTTCAAAGCCAAAACGTGTTGAGATGTATAGCACGGTGGCGTTGCCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463841.1 |
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| CDS CAA 90 bp | ACGCGCGTGCAAAGAGCCCTGGGGGAGAAAAGGGTCGGGCGGGCCTaGCCGCTCCAAGGTGCCATCGGGCGCTGGTCACTGAGTGGCCAC | + |
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Preference number: 6 (lower is better) Translates to: TRVQRALGEKRVGRA*PLQGAIGRWSLSGH Trigger: GTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGCCCGACCCTTTTCTCCCCCAGGGCTCTTTGCACGCGCGT 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS CCA 72 bp | TTACACACCGGCAGCACACGCGCGTGCAAAGAGCCCTaGGGGAGAAAAGGGTCGGGCGGGCCTTGCCGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LHTGSTRACKEP*GRKGSGGPCRS Trigger: GGAGCGGCAAGGCCCGCCCGACCCTTTTCTCCCCCAGGGCTCTTTGCACGCGCGTGTGCTGCCGGTGTGTAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000465573.1 ENST00000495200.1 |
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| CDS CAA 72 bp | CAAAGAGCCCTGGGGGAGAAAAGGGTCGGGCGGGCCTaGCCGCTCCAAGGTGCCATCGGGCGCTGGTCACTG | + |
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Preference number: 6 (lower is better) Translates to: QRALGEKRVGRA*PLQGAIGRWSL Trigger: CAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGCCCGACCCTTTTCTCCCCCAGGGCTCTTTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000465573.1 ENST00000495200.1 |
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| CDS TCA 72 bp | CCTTGCCGCTCCAAGGTGCCATCGGGCGCTGGTCACTaGGTGGCCACCAATCCCTCCCGCCCAGCCCAACAA | + |
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Preference number: 6 (lower is better) Translates to: PCRSKVPSGAGH*VATNPSRPAQQ Trigger: TTGTTGGGCTGGGCGGGAGGGATTGGTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS GCA 72 bp | GGAGAAAAGGGTCGGGCGGGCCTTGCCGCTCCAAGGTaGCATCGGGCGCTGGTCACTGAGTGGCCACCAATC | + |
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Preference number: 6 (lower is better) Translates to: GEKGRAGLAAPR*HRALVTEWPPI Trigger: GATTGGTGGCCACTCAGTGACCAGCGCCCGATGGCACCTTGGAGCGGCAAGGCCCGCCCGACCCTTTTCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495200.1 |
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| CDS CCA 72 bp | GAAATTTTCAGGAAACGCTGGGTCAAGCTCCCTGCCTaGCACCATGATTTTTACCCAAGATATTACACATCC | + |
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Preference number: 6 (lower is better) Translates to: EIFRKRWVKLPA*HHDFYPRYYTS Trigger: GGATGTGTAATATCTTGGGTAAAAATCATGGTGCCAGGCAGGGAGCTTGACCCAGCGTTTCCTGAAAATTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000465573.1 ENST00000495200.1 |
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| CDS CAA 72 bp | CAGGCAACGCCACCGTGCTATACATCTCAACACGTTTaGGCTTTGAAAGTTAACACCAAACCTCAGCTTATT | + |
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Preference number: 6 (lower is better) Translates to: QATPPCYTSQHV*ALKVNTKPQLI Trigger: AATAAGCTGAGGTTTGGTGTTAACTTTCAAAGCCAAAACGTGTTGAGATGTATAGCACGGTGGCGTTGCCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000463841.1 |
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| CDS TCA 72 bp | CGCCACCGTGCTATACATCTCAACACGTTTTGGCTTTaGAAGTTAACACCAAACCTCAGCTTATTCGTTAAG | + |
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Preference number: 6 (lower is better) Translates to: RHRAIHLNTFWL*KLTPNLSLFVK Trigger: CTTAACGAATAAGCTGAGGTTTGGTGTTAACTTTCAAAGCCAAAACGTGTTGAGATGTATAGCACGGTGGCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463841.1 |
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