RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSPB9 (Homo sapiens)

Ensembl gene IDs: ENSG00000260325

Ensembl transcript IDs: ENST00000565659.2

Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS TCA 90 bp GTCCTGTTTGGGCTTCAGGGAGGGCCAGCGCCACACACTGGCCTCTaGCCCACAGCTGCCCGGAGGGGGTCAGGCAGCAGGTCATGGCGG +
Preference number: 5 (lower is better)
Translates to: VLFGLQGGPAPHTGL*PTAARRGSGSRSWR
Trigger: CCGCCATGACCTGCTGCCTGACCCCCTCCGGGCAGCTGTGGGTCAGAGGCCAGTGTGTGGCGCTGGCCCTCCCTGAAGCCCAAACAGGAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 90 bp GAAGCCTTAGAGCCGAGGCTCCCGAGTCTCGGGGACGGTCCTGTTTaGGCTTCAGGGAGGGCCAGCGCCACACACTGGCCTCTGACCCAC +
Preference number: 5 (lower is better)
Translates to: EALEPRLPSLGDGPV*ASGRASATHWPLTH
Trigger: GTGGGTCAGAGGCCAGTGTGTGGCGCTGGCCCTCCCTGAAGCCCAAACAGGACCGTCCCCGAGACTCGGGAGCCTCGGCTCTAAGGCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 90 bp GCACCGGCATTGTGGCCACCCGGTTCCGTTCAGCAAGGCCCACGCTaGGACACCGGGATGCCACCCGGCTCTCGTTGGAGAAGGTGTTAC +
Preference number: 5 (lower is better)
Translates to: APALWPPGSVQQGPR*DTGMPPGSRWRRCY
Trigger: GTAACACCTTCTCCAACGAGAGCCGGGTGGCATCCCGGTGTCCCAGCGTGGGCCTTGCTGAACGGAACCGGGTGGCCACAATGCCGGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 90 bp GGGTCCCTGACGTCCAGTTGCTGCTGTCCGGTCACCATCAGCCATTaGCCATCCACCTGCACCACCAGTTCCTCCGGGGCGAAGCCGTGG +
Preference number: 5 (lower is better)
Translates to: GSLTSSCCCPVTISH*PSTCTTSSSGAKPW
Trigger: CCACGGCTTCGCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGGACGTCAGGGACCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS GCA 90 bp GGCCACCCGGTTCCGTTCAGCAAGGCCCACGCTGGGACACCGGGATaGCACCCGGCTCTCGTTGGAGAAGGTGTTACCGACTCTCTGCAT +
Preference number: 5 (lower is better)
Translates to: GHPVPFSKAHAGTPG*HPALVGEGVTDSLH
Trigger: ATGCAGAGAGTCGGTAACACCTTCTCCAACGAGAGCCGGGTGGCATCCCGGTGTCCCAGCGTGGGCCTTGCTGAACGGAACCGGGTGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS TCA 90 bp CGTCTCTGGCATGGTCATTGTCCTCCTGAGCCGCTGGACTGTCCCTaGGCAGCCGCACCGGCATTGTGGCCACCCGGTTCCGTTCAGCAA +
Preference number: 5 (lower is better)
Translates to: RLWHGHCPPEPLDCP*AAAPALWPPGSVQQ
Trigger: TTGCTGAACGGAACCGGGTGGCCACAATGCCGGTGCGGCTGCTCAGGGACAGTCCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS GCA 90 bp TCCAGTTGCTGCTGTCCGGTCACCATCAGCCATTGGCCATCCACCTaGACCACCAGTTCCTCCGGGGCGAAGCCGTGGGCATCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: SSCCCPVTISHWPST*TTSSSGAKPWASSF
Trigger: GAAGCTGGATGCCCACGGCTTCGCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 90 bp CAGCAAGGCCCACGCTGGGACACCGGGATGCCACCCGGCTCTCGTTaGAGAAGGTGTTACCGACTCTCTGCATCCGAGTCAGCAACTAAC +
Preference number: 5 (lower is better)
Translates to: QQGPRWDTGMPPGSR*RRCYRLSASESATN
Trigger: GTTAGTTGCTGACTCGGATGCAGAGAGTCGGTAACACCTTCTCCAACGAGAGCCGGGTGGCATCCCGGTGTCCCAGCGTGGGCCTTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 90 bp CATTTGGAAACCGTCTCTGGCATGGTCATTGTCCTCCTGAGCCGCTaGACTGTCCCTGAGCAGCCGCACCGGCATTGTGGCCACCCGGTT +
Preference number: 5 (lower is better)
Translates to: HLETVSGMVIVLLSR*TVPEQPHRHCGHPV
Trigger: AACCGGGTGGCCACAATGCCGGTGCGGCTGCTCAGGGACAGTCCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACGGTTTCCAAATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS TCA 90 bp TCCAGCTTCATTTGGAAACCGTCTCTGGCATGGTCATTGTCCTCCTaGGCCGCTGGACTGTCCCTGAGCAGCCGCACCGGCATTGTGGCC +
Preference number: 5 (lower is better)
Translates to: SSFIWKPSLAWSLSS*AAGLSLSSRTGIVA
Trigger: GGCCACAATGCCGGTGCGGCTGCTCAGGGACAGTCCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACGGTTTCCAAATGAAGCTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 90 bp CATTGGCCATCCACCTGCACCACCAGTTCCTCCGGGGCGAAGCCGTaGGCATCCAGCTTCATTTGGAAACCGTCTCTGGCATGGTCATTG +
Preference number: 5 (lower is better)
Translates to: HWPSTCTTSSSGAKP*ASSFIWKPSLAWSL
Trigger: CAATGACCATGCCAGAGACGGTTTCCAAATGAAGCTGGATGCCCACGGCTTCGCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS TCA 90 bp GGTAGGACTCAGGTTGGACGGGAGCATTTTCCGGTGCACCTTCTGTaGCATGCGGTAACTGACCCTTTCCGGGTCCCTGACGTCCAGTTG +
Preference number: 5 (lower is better)
Translates to: GRTQVGREHFPVHLL*HAVTDPFRVPDVQL
Trigger: CAACTGGACGTCAGGGACCCGGAAAGGGTCAGTTACCGCATGTCACAGAAGGTGCACCGGAAAATGCTCCCGTCCAACCTGAGTCCTACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 72 bp GAGCCGAGGCTCCCGAGTCTCGGGGACGGTCCTGTTTaGGCTTCAGGGAGGGCCAGCGCCACACACTGGCCT +
Preference number: 6 (lower is better)
Translates to: EPRLPSLGDGPV*ASGRASATHWP
Trigger: AGGCCAGTGTGTGGCGCTGGCCCTCCCTGAAGCCCAAACAGGACCGTCCCCGAGACTCGGGAGCCTCGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 72 bp AGAGCCGAGGCTCCCGAGTCTCGGGGACGGTCCTGTTaGGGCTTCAGGGAGGGCCAGCGCCACACACTGGCC +
Preference number: 6 (lower is better)
Translates to: RAEAPESRGRSC*GFREGQRHTLA
Trigger: GGCCAGTGTGTGGCGCTGGCCCTCCCTGAAGCCCAAACAGGACCGTCCCCGAGACTCGGGAGCCTCGGCTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 90 bp GGAAGCCTTAGAGCCGAGGCTCCCGAGTCTCGGGGACGGTCCTGTTaGGGCTTCAGGGAGGGCCAGCGCCACACACTGGCCTCTGACCCA +
Preference number: 6 (lower is better)
Translates to: GSLRAEAPESRGRSC*GFREGQRHTLASDP
Trigger: TGGGTCAGAGGCCAGTGTGTGGCGCTGGCCCTCCCTGAAGCCCAAACAGGACCGTCCCCGAGACTCGGGAGCCTCGGCTCTAAGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 90 bp CGGGTCCCTGACGTCCAGTTGCTGCTGTCCGGTCACCATCAGCCATaGGCCATCCACCTGCACCACCAGTTCCTCCGGGGCGAAGCCGTG +
Preference number: 6 (lower is better)
Translates to: RVPDVQLLLSGHHQP*AIHLHHQFLRGEAV
Trigger: CACGGCTTCGCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGGACGTCAGGGACCCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS TCA 72 bp CATGGTCATTGTCCTCCTGAGCCGCTGGACTGTCCCTaGGCAGCCGCACCGGCATTGTGGCCACCCGGTTCC +
Preference number: 6 (lower is better)
Translates to: HGHCPPEPLDCP*AAAPALWPPGS
Trigger: GGAACCGGGTGGCCACAATGCCGGTGCGGCTGCTCAGGGACAGTCCAGCGGCTCAGGAGGACAATGACCATG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS GCA 72 bp TGCTGTCCGGTCACCATCAGCCATTGGCCATCCACCTaGACCACCAGTTCCTCCGGGGCGAAGCCGTGGGCA +
Preference number: 6 (lower is better)
Translates to: CCPVTISHWPST*TTSSSGAKPWA
Trigger: TGCCCACGGCTTCGCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATGGCTGATGGTGACCGGACAGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS GCA 72 bp GTTCCGTTCAGCAAGGCCCACGCTGGGACACCGGGATaGCACCCGGCTCTCGTTGGAGAAGGTGTTACCGAC +
Preference number: 6 (lower is better)
Translates to: VPFSKAHAGTPG*HPALVGEGVTD
Trigger: GTCGGTAACACCTTCTCCAACGAGAGCCGGGTGGCATCCCGGTGTCCCAGCGTGGGCCTTGCTGAACGGAAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 72 bp ACCGTCTCTGGCATGGTCATTGTCCTCCTGAGCCGCTaGACTGTCCCTGAGCAGCCGCACCGGCATTGTGGC +
Preference number: 6 (lower is better)
Translates to: TVSGMVIVLLSR*TVPEQPHRHCG
Trigger: GCCACAATGCCGGTGCGGCTGCTCAGGGACAGTCCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 72 bp ACGTCCAGTTGCTGCTGTCCGGTCACCATCAGCCATTaGCCATCCACCTGCACCACCAGTTCCTCCGGGGCG +
Preference number: 6 (lower is better)
Translates to: TSSCCCPVTISH*PSTCTTSSSGA
Trigger: CGCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGGACGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 72 bp CCCACGCTGGGACACCGGGATGCCACCCGGCTCTCGTaGGAGAAGGTGTTACCGACTCTCTGCATCCGAGTC +
Preference number: 6 (lower is better)
Translates to: PTLGHRDATRLS*EKVLPTLCIRV
Trigger: GACTCGGATGCAGAGAGTCGGTAACACCTTCTCCAACGAGAGCCGGGTGGCATCCCGGTGTCCCAGCGTGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 72 bp GACGTCCAGTTGCTGCTGTCCGGTCACCATCAGCCATaGGCCATCCACCTGCACCACCAGTTCCTCCGGGGC +
Preference number: 6 (lower is better)
Translates to: DVQLLLSGHHQP*AIHLHHQFLRG
Trigger: GCCCCGGAGGAACTGGTGGTGCAGGTGGATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGGACGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 72 bp CCACGCTGGGACACCGGGATGCCACCCGGCTCTCGTTaGAGAAGGTGTTACCGACTCTCTGCATCCGAGTCA +
Preference number: 6 (lower is better)
Translates to: PRWDTGMPPGSR*RRCYRLSASES
Trigger: TGACTCGGATGCAGAGAGTCGGTAACACCTTCTCCAACGAGAGCCGGGTGGCATCCCGGTGTCCCAGCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 90 bp CACCACCAGTTCCTCCGGGGCGAAGCCGTGGGCATCCAGCTTCATTaGGAAACCGTCTCTGGCATGGTCATTGTCCTCCTGAGCCGCTGG +
Preference number: 6 (lower is better)
Translates to: HHQFLRGEAVGIQLH*ETVSGMVIVLLSRW
Trigger: CCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACGGTTTCCAAATGAAGCTGGATGCCCACGGCTTCGCCCCGGAGGAACTGGTGGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS TCA 72 bp ATTTGGAAACCGTCTCTGGCATGGTCATTGTCCTCCTaGGCCGCTGGACTGTCCCTGAGCAGCCGCACCGGC +
Preference number: 6 (lower is better)
Translates to: IWKPSLAWSLSS*AAGLSLSSRTG
Trigger: GCCGGTGCGGCTGCTCAGGGACAGTCCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACGGTTTCCAAAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 72 bp TCCACCTGCACCACCAGTTCCTCCGGGGCGAAGCCGTaGGCATCCAGCTTCATTTGGAAACCGTCTCTGGCA +
Preference number: 6 (lower is better)
Translates to: STCTTSSSGAKP*ASSFIWKPSLA
Trigger: TGCCAGAGACGGTTTCCAAATGAAGCTGGATGCCCACGGCTTCGCCCCGGAGGAACTGGTGGTGCAGGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 72 bp GCGGTAACTGACCCTTTCCGGGTCCCTGACGTCCAGTaGCTGCTGTCCGGTCACCATCAGCCATTGGCCATC +
Preference number: 6 (lower is better)
Translates to: AVTDPFRVPDVQ*LLSGHHQPLAI
Trigger: GATGGCCAATGGCTGATGGTGACCGGACAGCAGCAACTGGACGTCAGGGACCCGGAAAGGGTCAGTTACCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS TCA 72 bp CAGGTTGGACGGGAGCATTTTCCGGTGCACCTTCTGTaGCATGCGGTAACTGACCCTTTCCGGGTCCCTGAC +
Preference number: 6 (lower is better)
Translates to: QVGREHFPVHLL*HAVTDPFRVPD
Trigger: GTCAGGGACCCGGAAAGGGTCAGTTACCGCATGTCACAGAAGGTGCACCGGAAAATGCTCCCGTCCAACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CAA 72 bp TTCCTCCGGGGCGAAGCCGTGGGCATCCAGCTTCATTaGGAAACCGTCTCTGGCATGGTCATTGTCCTCCTG +
Preference number: 6 (lower is better)
Translates to: FLRGEAVGIQLH*ETVSGMVIVLL
Trigger: CAGGAGGACAATGACCATGCCAGAGACGGTTTCCAAATGAAGCTGGATGCCCACGGCTTCGCCCCGGAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000565659.2
CDS CCA 72 bp AGCCGTGGGCATCCAGCTTCATTTGGAAACCGTCTCTaGCATGGTCATTGTCCTCCTGAGCCGCTGGACTGT +
Preference number: 6 (lower is better)
Translates to: SRGHPASFGNRL*HGHCPPEPLDC
Trigger: ACAGTCCAGCGGCTCAGGAGGACAATGACCATGCCAGAGACGGTTTCCAAATGAAGCTGGATGCCCACGGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000565659.2