RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSPB7 (Homo sapiens)

Ensembl gene IDs: ENSG00000173641

Ensembl transcript IDs: ENST00000311890.14, ENST00000375718.4, ENST00000406363.2, ENST00000411503.5, ENST00000442459.2, ENST00000463576.5, ENST00000487046.1

Found 459 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGGGCTAGAACCTGGGCTGAGATGTCC +
Preference number: 1 (lower is better)
Translates to: ALDRVEGPSLGGWST*GLGCVGARTWAEMS
Trigger: GGACATCTCAGCCCAGGTTCTAGCCCCCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 90 bp CATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGT +
Preference number: 1 (lower is better)
Translates to: HHVSGQGVPGLPWIE*RALVWEDGPPGVWG
Trigger: ACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 90 bp GATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTaGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCT +
Preference number: 1 (lower is better)
Translates to: DGWRADCPEGKVARS*GPTSRTQSPIHALA
Trigger: AGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 90 bp ATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTaGGGTGCGTGGGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCT +
Preference number: 1 (lower is better)
Translates to: IEWRALVWEDGPPGV*GAWGLEPGLRCPGA
Trigger: AGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCCCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 90 bp AAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTaGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGG +
Preference number: 1 (lower is better)
Translates to: KSGHHVSGQGVPGLP*IEWRALVWEDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 90 bp GAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTaGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: EAGVQPRGPKAPSMP*LPSLLGDPVCMGAA
Trigger: GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 90 bp GCCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGG +
Preference number: 1 (lower is better)
Translates to: AKSEIWASCVRPGSP*PALDRVEGPSLGGW
Trigger: CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR GCA 90 bp ACTCCCCTTGGCCAAGAGGGTTCCAGGTCCCTGGTCCCCTTGCCCTaGAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCT +
Preference number: 1 (lower is better)
Translates to: TPLGQEGSRSLVPLP*RDFIDQRVCLSVCP
Trigger: AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTGGAACCCTCTTGGCCAAGGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 90 bp CCCTCCACCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTaGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCC +
Preference number: 1 (lower is better)
Translates to: PSTLLLYVGDETKSH*GQQAFPRVKADGRS
Trigger: GGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGGTGGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 90 bp CTGCTAACTGAGACCCACCCTTCCCCTCCACCCTGCTTCTGTATGTaGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCCCA +
Preference number: 1 (lower is better)
Translates to: LLTETHPSPPPCFCM*ETKPRVIGGSRHFP
Trigger: TGGGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGGTGGAGGGGAAGGGTGGGTCTCAGTTAGCAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCGCTGGGGGCACGGGGTaGGCAGGCAGCCTGCTCGCT +
Preference number: 2 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPAGGTG*AGSLLA
Trigger: AGCGAGCAGGCTGCCTGCCCACCCCGTGCCCCCAGC...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR GCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRGGWST*GLGCVG
Trigger: CCCCACGCACCCCAGACCCCAGGTGGACCATCCTCC...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR GCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR GCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCGATGTGGCATGGCTCTaGCCTGGCACAGCCAGCTGG +
Preference number: 2 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPDVAWL*PGTASW
Trigger: CCAGCTGGCTGTGCCAGGGCAGAGCCATGCCACATC...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGAGGCAGCCTGCTCGCTaGCGTGGGGCTTGGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLRQPAR*RGAWRL
Trigger: CAGCCTCCAAGCCCCACGCCAGCGAGCAGGCTGCCT...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTG +
Preference number: 2 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLRPGSP*PALDRV
Trigger: CACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCT...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCACCCTCCCACTCCCCTTaGCCAAGAGGGTTCCAGGTC +
Preference number: 2 (lower is better)
Translates to: GEVYRHGCLLLALLSPRAPSHSP*PRGFQV
Trigger: GACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGG...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR TCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCTCCTCTTGGCCTTGCTaGGCCCTCGGGCAATTAGTT +
Preference number: 2 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPSSWPC*ALGQLV
Trigger: AACTAATTGCCCGAGGGCTCAGCAAGGCCAAGAGGA...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTCCTAGTTTGGGAGGATaGTCCACCTGGGGTCTGGGG +
Preference number: 2 (lower is better)
Translates to: ARSWGPTSRTQSPIHALAPSLGG*STWGLG
Trigger: CCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGG...AGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCTATACAGATGTGGCATaGCTCTGCCCTGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPYTDVA*LCPGTA
Trigger: GGCTGTGCCAGGGCAGAGCCATGCCACATCTGTATA...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR GCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR GCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCTGGTCCCCTTGCCCTaGAGAGACTTCATAGATCAG +
Preference number: 2 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPLVPLP*RDFIDQ
Trigger: CTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR GCA 90 bp AGAGTCATTGGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCCCAACCCCACTTGGCCTTaGCTGGAGGCCCCAGCAGGC +
Preference number: 2 (lower is better)
Translates to: RVIGGSRHFPGLRLMEGPNPTWP*LEAPAG
Trigger: GCCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTT...GGGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR GCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCTTAGGTGATCCTGTCTaGATGGGAGCAGCCCCAAGA +
Preference number: 2 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPLGDPV*MGAAPR
Trigger: TCTTGGGGCTGCTCCCATGCAGACAGGATCACCTAA...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCAGCCCATATGTCCTGCTaGTCCCATTCCCCTGACCCA +
Preference number: 2 (lower is better)
Translates to: GEVYRHGCLLLALLSPRAAHMSC*SHSPDP
Trigger: TGGGTCAGGGGAATGGGACCAGCAGGACATATGGGC...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGGCCCATATGTCCTGCTaGTCCCATTCCCCTGACCCA +
Preference number: 2 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLAHMSC*SHSPDP
Trigger: TGGGTCAGGGGAATGGGACCAGCAGGACATATGGGC...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCGCCTGCTCGCTGGCGTaGGGCTTGGAGGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAAACSLA*GLEAGR
Trigger: TCTACCAGCCTCCAAGCCCCACGCCAGCGAGCAGGC...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATGCCTGCTCGCTGGCGTaGGGCTTGGAGGCTGGTAGA +
Preference number: 2 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHACSLA*GLEAGR
Trigger: TCTACCAGCCTCCAAGCCCCACGCCAGCGAGCAGGC...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CAA 90 bp CCTCCCACTCCCCTTGGCCAAGAGGGTTCCAGGTCCCTGGTCCCCTaGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTC +
Preference number: 2 (lower is better)
Translates to: PPTPLGQEGSRSLVP*PCRDFIDQRVCLSV
Trigger: GACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR GCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 2 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGG +
Preference number: 2 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAAWRALV*EDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCA...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGGCATGGCTCTGCCCTaGCACAGCCAGCTGGCTGGG +
Preference number: 2 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIGMALP*HSQLAG
Trigger: CCCAGCCAGCTGGCTGTGCCAGGGCAGAGCCATGCC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCGCCCGGAGGGGAAGGTaGCAAGAAGCTGGGGTCCAA +
Preference number: 2 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSARRGR*QEAGVQ
Trigger: TTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGGC...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CCA 90 bp GCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 2 (lower is better)
Translates to: ARSWGPTSRTQSPIHALAWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...AGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGGCCAAATCTGAAATCTaGGCATCATGTGTCAGGCCA +
Preference number: 2 (lower is better)
Translates to: RGMDGELTARRGRWQEAGAKSEI*ASCVRP
Trigger: TGGCCTGACACATGATGCCCAGATTTCAGATTTGGC...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR TCA 90 bp AGAGTCATTGGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCCCTCCTCTTGGCCTTGCTaGGCCCTCGGGCAATTAGTT +
Preference number: 2 (lower is better)
Translates to: RVIGGSRHFPGLRLMEGPSSWPC*ALGQLV
Trigger: AACTAATTGCCCGAGGGCTCAGCAAGGCCAAGAGGA...GGGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CAA 90 bp GTCCCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTaGTCTGTCTGTCTGTCCTGCAGAGCTTGCCCATATGTCCTGCTG +
Preference number: 2 (lower is better)
Translates to: VPGPLALQRLHRSEG*SVCLSCRACPYVLL
Trigger: CAGCAGGACATATGGGCAAGCTCTGCAGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTTATACAGATGTGGCATaGCTCTGCCCTGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIYTDVA*LCPGTA
Trigger: GGCTGTGCCAGGGCAGAGCCATGCCACATCTGTATA...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCTATACAGATGTGGCATaGCTCTGCCCTGGCACAGCC +
Preference number: 2 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFYTDVA*LCPGTA
Trigger: GGCTGTGCCAGGGCAGAGCCATGCCACATCTGTATA...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR TCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTGACGGAGGCCAAATCTaGAATCTGGGCATCATGTGT +
Preference number: 2 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCDGGQI*NLGIMC
Trigger: ACACATGATGCCCAGATTTCAGATTTGGCCTCCGTC...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR TCA 90 bp AGAGTCATTGGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCCCGTACTCTGGATTAAGTaGCGGAGGCCAAATCTGAAA +
Preference number: 2 (lower is better)
Translates to: RVIGGSRHFPGLRLMEGPVLWIK*RRPNLK
Trigger: TTTCAGATTTGGCCTCCGTCACTTAATCCAGAGTAC...GGGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGACGAACCAGCTGTATTaGAAAAACCCCATCTATATA +
Preference number: 2 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLTNQLY*KNPIYI
Trigger: TATATAGATGGGGTTTTTCCAATACAGCTGGTTCGT...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR TCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATGTACTCTGGATTAAGTaGCGGAGGCCAAATCTGAAA +
Preference number: 2 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHVLWIK*RRPNLK
Trigger: TTTCAGATTTGGCCTCCGTCACTTAATCCAGAGTAC...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR TCA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCGTAATGCTGAGTATTTaGAGGACAACGATAGGGGTG +
Preference number: 2 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFVMLSI*RTTIGV
Trigger: CACCCCTATCGTTGTCCTTCAAATACTCAGCATTAC...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CAA 90 bp GAGAAAGCTCTGAATTTGGCCTCAACCAATGGTAATGCTGAGTATTaGAAGGACAACGATAGGGGTGTGTGTGTTACACACACCGAGCCT +
Preference number: 2 (lower is better)
Translates to: EKALNLASTNGNAEY*KDNDRGVCVTHTEP
Trigger: AGGCTCGGTGTGTGTAACACACACACCCCTATCGTTGTCCTTCAAATACTCAGCATTACCATTGGTTGAGGCCAAATTCAGAGCTTTCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: RGMDGELTARRGRWQEAGGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
68% GC, longest homopolymer 7 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
68% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CAA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
68% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CAA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CAA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 3 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 72 bp CCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGG +
Preference number: 3 (lower is better)
Translates to: PGLPWIEWRALV*EDGPPGVWGAW
Trigger: CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CAA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGCAACCCCACTTGGCCTaGCCTGGAGGCCCCAGCAGG +
Preference number: 3 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLQPHLA*PGGPSR
Trigger: CCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTTG...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 72 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGGGCTAGAACCTGGGCT +
Preference number: 3 (lower is better)
Translates to: RVEGPSLGGWST*GLGCVGARTWA
Trigger: AGCCCAGGTTCTAGCCCCCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 72 bp TCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGG +
Preference number: 3 (lower is better)
Translates to: SGQGVPGLPWIE*RALVWEDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGA
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR-3UTR CAA 90 bp GCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 3 (lower is better)
Translates to: ARSWGPTSRTQSPIHALAVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...AGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 72 bp AGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTaGGGTCCAACCTCGAGGACCCAAAGCCCCATCCAT +
Preference number: 3 (lower is better)
Translates to: RADCPEGKVARS*GPTSRTQSPIH
Trigger: ATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 72 bp CATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTaGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGT +
Preference number: 3 (lower is better)
Translates to: HHVSGQGVPGLP*IEWRALVWEDG
Trigger: ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 72 bp GGGTGCGTGGGGGCTAGAACCTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTG +
Preference number: 3 (lower is better)
Translates to: GCVGARTWAEMS*SCCNGVSEALL
Trigger: CAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCCCACGCACCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
3UTR CCA 72 bp GAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTG +
Preference number: 3 (lower is better)
Translates to: EIWASCVRPGSP*PALDRVEGPSL
Trigger: CAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 3 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCACGAACCAGCTGTATaGGAAAAACCCCATCTATAT +
Preference number: 3 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPHEPAV*EKPHLY
Trigger: ATATAGATGGGGTTTTTCCAATACAGCTGGTTCGTG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR GCA 72 bp CTGTCTGTCTGTCCTGCAGAGCTTGCCCATATGTCCTaGTGGTCCCATTCCCCTGACCCACAGTGGGTTCTT +
Preference number: 3 (lower is better)
Translates to: LSVCPAELAHMS*WSHSPDPQWVL
Trigger: AAGAACCCACTGTGGGTCAGGGGAATGGGACCAGCAGGACATATGGGCAAGCTCTGCAGGACAGACAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR GCA 72 bp GGCCAAGAGGGTTCCAGGTCCCTGGTCCCCTTGCCCTaGAGAGACTTCATAGATCAGAGGGTTTGTCTGTCT +
Preference number: 3 (lower is better)
Translates to: GQEGSRSLVPLP*RDFIDQRVCLS
Trigger: AGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTGGAACCCTCTTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCTCTGTCCTGCAGAGCTaGCCCATATGTCCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSSVLQS*PICPAG
Trigger: ACCAGCAGGACATATGGGCAAGCTCTGCAGGACAGA...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCCCCAGAGGTGGGGAGTaGAGAGCAGCAGTTGACACC +
Preference number: 3 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFPRGGE*RAAVDT
Trigger: GGTGTCAACTGCTGCTCTCAACTCCCCACCTCTGGG...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR GCA 72 bp GGAGGCCCCAGCAGGCGCAGGACGGCAGGAGTTTCATaGAGTTTATCACGAACCAGCTGTATTGGAAAAACC +
Preference number: 3 (lower is better)
Translates to: GGPSRRRTAGVS*SLSRTSCIGKT
Trigger: GGTTTTTCCAATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCTGGGGCCTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR TCA 72 bp CCCCTGTACTCTGGATTAAGTGACGGAGGCCAAATCTaGAATCTGGGCATCATGTGTCAGGCCAGGGAGTCC +
Preference number: 3 (lower is better)
Translates to: PLYSGLSDGGQI*NLGIMCQARES
Trigger: GGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGGCCTCCGTCACTTAATCCAGAGTACAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR-3UTR CAA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCTCTGTCCTGCAGAGCTaGCCCATATGTCCTGCTGGT +
Preference number: 3 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFSVLQS*PICPAG
Trigger: ACCAGCAGGACATATGGGCAAGCTCTGCAGGACAGA...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CCA 72 bp CTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTaGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGAT +
Preference number: 3 (lower is better)
Translates to: LLLYVGDETKSH*GQQAFPRVKAD
Trigger: ATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGCCTCTGGGCGAGCGTaGCAGGCTCCGACTGCGGCC +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWASGRA*QAPTAA
Trigger: GGCCGCAGTCGGAGCCTGGCACGCTCGCCCAGAGGC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGTGGGCGCAGGCCTCTaGGCGAGCGTGCCAGGCTCC +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGVGAGL*ASVPGS
Trigger: GGAGCCTGGCACGCTCGCCCAGAGGCCTGCGCCCAC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
69% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000487046.1
CDS-3UTR GCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCGGTCTTGATGTTGCCTaGCCCACCGGGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPGLDVA*PTGAGW
Trigger: CCAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAGGTGGGCAGGCAGCCTaGTCGCTGGCGTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGGGQAA*SLAWGL
Trigger: CAAGCCCCACGCCAGCGAGCAGGCTGCCTGCCCACC...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGGGTGGGCAGGCAGCCTaGTCGCTGGCGTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGGGQAA*SLAWGL
Trigger: CAAGCCCCACGCCAGCGAGCAGGCTGCCTGCCCACC...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGCAGGCGGGCGAGGGCTaGACAGGAGAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGQAGEG*TGEGVG
Trigger: GCCCACACCCTCTCCTGTCCAGCCCTCGCCCGCCTG...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000411503.5
CDS-3UTR CCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWGGWST*GLGCVG
Trigger: CCCCACGCACCCCAGACCCCAGGTGGACCATCCTCC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGCTGGGGGCACGGGGTaGGCAGGCAGCCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCAGGTG*AGSLLA
Trigger: AGCGAGCAGGCTGCCTGCCCACCCCGTGCCCCCAGC...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGCCTGGCACAGCCAGCTaGCTGGGGGCACGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLPGTAS*LGARGG
Trigger: CCCACCCCGTGCCCCCAGCCAGCTGGCTGTGCCAGG...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCCACTTGGCCTTGCCTaGAGGCCCCAGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPPLGLA*RPQQAQ
Trigger: CTGCGCCTGCTGGGGCCTCCAGGCAAGGCCAAGTGG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWMRVTP*PDSEAA
Trigger: GGCAGCCTCACTATCCGGGCACGGCGTCACCCGCAT...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
67% GC, longest homopolymer 8 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
67% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATCAGGCGGGCGAGGGCTaGACAGGAGAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDQAGEG*TGEGVG
Trigger: GCCCACACCCTCTCCTGTCCAGCCCTCGCCCGCCTG...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGTCAGGGCCTTCTCCATaGGCGGGTCCTGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGSGPSP*AGPGPG
Trigger: TCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGA...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTATCAGGGCCTTCTCCATaGGCGGGTCCTGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALSGPSP*AGPGPG
Trigger: TCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGA...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGCCAGGGGCTCCGAGTaGGGCCGCATGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGARGSE*GRMKLP
Trigger: TGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
67% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGCCAGGGGCTCCGAGTaGGGCCGCATGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALARGSE*GRMKLP
Trigger: TGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGC...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGAGGCAGCCTGCTCGCTaGCGTGGGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGRQPAR*RGAWRL
Trigger: CAGCCTCCAAGCCCCACGCCAGCGAGCAGGCTGCCT...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGCATGGCTCTGCCCTaGCACAGCCAGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGMALP*HSQLAG
Trigger: CCCAGCCAGCTGGCTGTGCCAGGGCAGAGCCATGCC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
67% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAGGCATGGCTCTGCCCTaGCACAGCCAGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGGMALP*HSQLAG
Trigger: CCCAGCCAGCTGGCTGTGCCAGGGCAGAGCCATGCC...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CAA 72 bp CCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTG +
Preference number: 4 (lower is better)
Translates to: PWPALDRVEGPS*GGWSTWGLGCV
Trigger: CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCGGATGGATGGAGAGCTaGCTGCCCGGAGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPGWMES*LPGGEG
Trigger: ACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCC...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGGGACCCCTGCTAACTaGGACCCACCCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWGTPAN*DPPFPS
Trigger: GGAGGGGAAGGGTGGGTCTCAGTTAGCAGGGGTCCC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGMRVTP*PDSEAA
Trigger: GGCAGCCTCACTATCCGGGCACGGCGTCACCCGCAT...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGMRVTP*PDSEAA
Trigger: GGCAGCCTCACTATCCGGGCACGGCGTCACCCGCAT...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGAACCCCACTTGGCCTTaGCTGGAGGCCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWNPTWP*LEAPAG
Trigger: GCCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTT...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGCGGCCAGGCCCTCTaGTCTGCCCAGGTTGCAGTT +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGGQAL*SAQVAV
Trigger: AACTGCAACCTGGGCAGAGCAGAGGGCCTGGCCGCC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGTCTTGATGTTGCCTaGCCCACCGGGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGLDVA*PTGAGC
Trigger: ACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
66% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000406363.2
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGGTCTTGATGTTGCCTaGCCCACCGGGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGGLDVA*PTGAGC
Trigger: ACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLGGWST*GLGCVG
Trigger: CCCCACGCACCCCAGACCCCAGGTGGACCATCCTCC...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCGGWST*GLGCVG
Trigger: CCCCACGCACCCCAGACCCCAGGTGGACCATCCTCC...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCGCCTGCTCGCTGGCGTaGGGCTTGGAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGACSLA*GLEAGR
Trigger: TCTACCAGCCTCCAAGCCCCACGCCAGCGAGCAGGC...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGAGGCAGCCTGCTCGCTaGCGTGGGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLRQPAR*RGAWRL
Trigger: CAGCCTCCAAGCCCCACGCCAGCGAGCAGGCTGCCT...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCCCTGGCACAGCCAGCTaGCTGGGGGCACGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPPGTAS*LGARGG
Trigger: CCCACCCCGTGCCCCCAGCCAGCTGGCTGTGCCAGG...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGACCGAGTGGGGCCGCATaGAGCTGCCAAAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGPSGAA*SCQSHR
Trigger: CCGATGACTTTGGCAGCTTCATGCGGCCCCACTCGG...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGCCGAGTGGGGCCGCATaGAGCTGCCAAAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGPSGAA*SCQSHR
Trigger: CCGATGACTTTGGCAGCTTCATGCGGCCCCACTCGG...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCGAGTGGGGCCGCATaGAGCTGCCAAAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGPSGAA*SCQSHR
Trigger: CCGATGACTTTGGCAGCTTCATGCGGCCCCACTCGG...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGRLLGS*CCLPHR
Trigger: CCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACG...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGRLLGS*CCLPHR
Trigger: CCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACG...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWRLLGS*CCLPHR
Trigger: CCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACG...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWERRCS*QCRQPP
Trigger: TGGCGGCTGACGGCACTGTCATGAACACCTTCGCTC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGGATGGATGGAGAGCTaGCTGCCCGGAGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWGWMES*LPGGEG
Trigger: ACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGACCCCTGCTAACTaGGACCCACCCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDGTPAN*DPPFPS
Trigger: GGAGGGGAAGGGTGGGTCTCAGTTAGCAGGGGTCCC...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCAGAGTGGTGGGAGTaGGAGGCCACCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGPEWWE*EATLRH
Trigger: GTGCCTTAGGGTGGCCTCTCACTCCCACCACTCTGG...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDMRVTP*PDSEAA
Trigger: GGCAGCCTCACTATCCGGGCACGGCGTCACCCGCAT...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGATGTGGCATGGCTCTaGCCTGGCACAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWDVAWL*PGTASW
Trigger: CCAGCTGGCTGTGCCAGGGCAGAGCCATGCCACATC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGGATGGAGAGCTGACTaGCCGGAGGGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALGWRAD*PEGKVA
Trigger: TGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCC...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGAGGCCTCTCTGACTaGTCCTGCTCACATGGGCCC +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGGLSD*SCSHGP
Trigger: GGGCCCATGTGAGCAGGAGCAGTCAGAGAGGCCTCC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
64% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp GGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTGGTCTTGATGTTGCCTaGCCCACCGGGGCGGGCTGT +
Preference number: 4 (lower is better)
Translates to: GVPGLPWIEWRALVWEDGGLDVA*PTGAGC
Trigger: ACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC...ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGRPGSP*PALDRV
Trigger: CACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCT...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTG +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGRPGSP*PALDRV
Trigger: CACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCT...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCCTCCCACTCCCCTTaGCCAAGAGGGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGPSHSP*PRGFQV
Trigger: GACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGG...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGCCCTCCCACTCCCCTTaGCCAAGAGGGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVPSHSP*PRGFQV
Trigger: GACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGG...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGCTGGGGGCACGGGGTaGGCAGGCAGCCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWAGGTG*AGSLLA
Trigger: AGCGAGCAGGCTGCCTGCCCACCCCGTGCCCCCAGC...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGCCCGGAGGGGAAGGTaGCAAGAAGCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGARRGR*QEAGVQ
Trigger: TTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGGC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 22 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLRLLGS*CCLPHR
Trigger: CCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACG...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGERRCS*QCRQPP
Trigger: TGGCGGCTGACGGCACTGTCATGAACACCTTCGCTC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGERRCS*QCRQPP
Trigger: TGGCGGCTGACGGCACTGTCATGAACACCTTCGCTC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGERRCS*QCRQPP
Trigger: TGGCGGCTGACGGCACTGTCATGAACACCTTCGCTC...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGCSVCG*RRARIV
Trigger: CACTATCCGGGCACGGCGTCACCCGCATACAGAACA...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTG +
Preference number: 4 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRCSVCG*RRARIV
Trigger: CACTATCCGGGCACGGCGTCACCCGCATACAGAACA...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCAGGATGGATGGAGAGCTaGCTGCCCGGAGGGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GEVYRHGCLLLALLSPRAGWMES*LPGGEG
Trigger: ACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCC...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTACACCCTAAGGCACACTaGCCAGAGAGGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALHPKAH*PERHGG
Trigger: CCCTCCATGCCTCTCTGGTCAGTGTGCCTTAGGGTG...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCCTTCCCCTCCACCCTaGTTCTGTATGTGGGAGACG +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPPSPPP*FCMWET
Trigger: CGTCTCCCACATACAGAAGCAGGGTGGAGGGGAAGG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGCAGGCGGGCGAGGGCTaGACAGGAGAGGGTGTGGGC +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWQAGEG*TGEGVG
Trigger: GCCCACACCCTCTCCTGTCCAGCCCTCGCCCGCCTG...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGTGGAAGAGGTTCTGTaGCTCATCCACGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWVEEVL*LIHGRR
Trigger: GCGCCGTCCGTGGATGAGCCACAGAACCTCTTCCAC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGTGGAAGAGGTTCTGTaGCTCATCCACGGACGGCGC +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGVEEVL*LIHGRR
Trigger: GCGCCGTCCGTGGATGAGCCACAGAACCTCTTCCAC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATGCCAGGGGCTCCGAGTaGGGCCGCATGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: SEIWASCVRPGSPWPALDARGSE*GRMKLP
Trigger: TGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGC...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGCCTAGTTTGGGAGGATaGTCCACCTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRPSLGG*STWGLG
Trigger: CCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGG...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGCCTAGTTTGGGAGGATaGTCCACCTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGPSLGG*STWGLG
Trigger: CCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGG...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWWRALV*EDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCA...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGWRALV*EDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCA...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTG +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLRPGSP*PALDRV
Trigger: CACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCT...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCCCCTCCCACTCCCCTTaGCCAAGAGGGTTCCAGGTC +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCPSHSP*PRGFQV
Trigger: GACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGG...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTCCTGGCACAGCCAGCTaGCTGGGGGCACGGGGTGGG +
Preference number: 4 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEAPGTAS*LGARGG
Trigger: CCCACCCCGTGCCCCCAGCCAGCTGGCTGTGCCAGG...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGGCCCGGAGGGGAAGGTaGCAAGAAGCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLARRGR*QEAGVQ
Trigger: TTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGGC...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCCCAGCTGGAAGACGTaGGGAGGGTTGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPPSWKT*GGLHSL
Trigger: AAGGCTATGCAACCCTCCCCACGTCTTCCAGCTGGG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGAGGCTGACTTGCCCTaGGGACCCCTGCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGEADLP*GPLLTE
Trigger: CTCAGTTAGCAGGGGTCCCCAGGGCAAGTCAGCCTC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLERRCS*QCRQPP
Trigger: TGGCGGCTGACGGCACTGTCATGAACACCTTCGCTC...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCGGGACCCCTGCTAACTaGGACCCACCCTTCCCCTCC +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPGTPAN*DPPFPS
Trigger: GGAGGGGAAGGGTGGGTCTCAGTTAGCAGGGGTCCC...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAAGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGGTTAGCGAGGCTTTaGTGGCAGGCGTGGGGCGGG +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWGLARL*WQAWGG
Trigger: CCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCC...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCTTGCCCATATGTCCTaGTGGTCCCATTCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPLAHMS*WSHSPD
Trigger: GTCAGGGGAATGGGACCAGCAGGACATATGGGCAAG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGCTGTCCTGCAGAGCTTaGCCATATGTCCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWLSCRA*PYVLLV
Trigger: GACCAGCAGGACATATGGGCAAGCTCTGCAGGACAG...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGGCCAGGGGCTCCGAGTaGGGCCGCATGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWARGSE*GRMKLP
Trigger: TGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGC...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGCCCGCACCTCGATGTaGTTGTTGGAGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGARTSM*LLEVVT
Trigger: TGTCACCACCTCCAACAACCACATCGAGGTGCGGGC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000487046.1
CDS-3UTR CCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCCGGAAGGTCTGCTaGACGTGTTCTGTATGCGGG +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGVRKVC*TCSVCG
Trigger: CCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGTCCGGAAGGTCTGCTaGACGTGTTCTGTATGCGGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGVRKVC*TCSVCG
Trigger: CCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
62% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGTCCGGAAGGTCTGCTaGACGTGTTCTGTATGCGGG +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWVRKVC*TCSVCG
Trigger: CCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCCCTAGTTTGGGAGGATaGTCCACCTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCPSLGG*STWGLG
Trigger: CCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGG...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: GVPGLPWIEWRALVWEDGWRALV*EDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCA...ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTGCTGGGGGCACGGGGTaGGCAGGCAGCCTGCTCGCT +
Preference number: 4 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCAGGTG*AGSLLA
Trigger: AGCGAGCAGGCTGCCTGCCCACCCCGTGCCCCCAGC...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGGCATGGCTCTGCCCTaGCACAGCCAGCTGGCTGGG +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAGMALP*HSQLAG
Trigger: CCCAGCCAGCTGGCTGTGCCAGGGCAGAGCCATGCC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCCACTTGGCCTTGCCTaGAGGCCCCAGCAGGCGCAG +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWPLGLA*RPQQAQ
Trigger: CTGCGCCTGCTGGGGCCTCCAGGCAAGGCCAAGTGG...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCAAGAACACAGGCCTGTaGGAGGGAGAAGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGKNTGL*EGEGPA
Trigger: GGCTGGTCCTTCTCCCTCCCACAGGCCTGTGTTCTT...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAAAGAACACAGGCCTGTaGGAGGGAGAAGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALKNTGL*EGEGPA
Trigger: GGCTGGTCCTTCTCCCTCCCACAGGCCTGTGTTCTT...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGAAGGTGGCAAGAAGCTaGGGTCCAACCTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGKVARS*GPTSRT
Trigger: GGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTT...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAAAGCACAGCACTCAGTaGCTCGGGGATGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGKHSTQ*LGDVSP
Trigger: CGGGGAAACATCCCCGAGCCACTGAGTGCTGTGCTT...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCCAGCTGGAAGACGTaGGGAGGGTTGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGPSWKT*GGLHSL
Trigger: AAGGCTATGCAACCCTCCCCACGTCTTCCAGCTGGG...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTGAGGCTGACTTGCCCTaGGGACCCCTGCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: GVPGLPWIEWRALVWEDGEADLP*GPLLTE
Trigger: CTCAGTTAGCAGGGGTCCCCAGGGCAAGTCAGCCTC...ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTATCTTCCCTATCCAACTaGCAGTTCCCACGGGGGCGA +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALSSLSN*QFPRGR
Trigger: TCGCCCCCGTGGGAACTGCCAGTTGGATAGGGAAGA...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR CCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAGCCGCCAGCTCGATGTaGTTGTTGGAGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGAASSM*LLEVVT
Trigger: TGTCACCACCTCCAACAACCACATCGAGCTGGCGGC...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411503.5
ENST00000463576.5
CDS-3UTR TCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGSWHL*AKVFMT
Trigger: TGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
61% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGTCCTCTTGGCCTTGCTaGGCCCTCGGGCAATTAGTT +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGSSWPC*ALGQLV
Trigger: AACTAATTGCCCGAGGGCTCAGCAAGGCCAAGAGGA...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATCCTCTTGGCCTTGCTaGGCCCTCGGGCAATTAGTT +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGSSWPC*ALGQLV
Trigger: AACTAATTGCCCGAGGGCTCAGCAAGGCCAAGAGGA...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCTCCATCTCTGTTAGGTaGTCCTGTCTGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPSISVR*SCLHGS
Trigger: GCTCCCATGCAGACAGGATCACCTAACAGAGATGGA...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCCCAGAGTGGTGGGAGTaGGAGGCCACCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPPEWWE*EATLRH
Trigger: GTGCCTTAGGGTGGCCTCTCACTCCCACCACTCTGG...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTGGTCTTGATGTTGCCTaGCCCACCGGGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEAGLDVA*PTGAGW
Trigger: CCAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARMRVTP*PDSEAA
Trigger: GGCAGCCTCACTATCCGGGCACGGCGTCACCCGCAT...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGTCCGTCCGGAAGGTCTaGTGGACGTGTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGSVRKV*WTCSVC
Trigger: GCATACAGAACACGTCCAGCAGACCTTCCGGACGGA...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGCTTGCCCATATGTCCTaGTGGTCCCATTCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRLAHMS*WSHSPD
Trigger: GTCAGGGGAATGGGACCAGCAGGACATATGGGCAAG...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCAACCCCACTTGGCCTTaGCTGGAGGCCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAANPTWP*LEAPAG
Trigger: GCCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTT...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCGGATGGAGAGCTGACTaGCCGGAGGGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPGWRAD*PEGKVA
Trigger: TGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCC...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTGGCTGTGGGATGGGCTaGTGGGAAGGCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEAGCGMG*WEGQGL
Trigger: GAGCCCCTGGCCTTCCCAGCAGCCCATCCCACAGCC...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CAGGTCCCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTTCAGGGCCTTCTCCATaGGCGGGTCCTGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: QVPGPLALQRLHRSEGLSSGPSP*AGPGPG
Trigger: TCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGA...AGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTCAGGGCCTTCTCCATaGGCGGGTCCTGGGCCGGGA +
Preference number: 4 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHSGPSP*AGPGPG
Trigger: TCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGA...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000411503.5
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTCCGGAAGGTCTGCTaGACGTGTTCTGTATGCGGG +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCVRKVC*TCSVCG
Trigger: CCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCLPWIE*RALVWE
Trigger: CTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAG...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLLPWIE*RALVWE
Trigger: CTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAG...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDLPWIE*RALVWE
Trigger: CTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAG...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTGATCCTGTCTGCATaGGAGCAGCCCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGVILSA*EQPQEH
Trigger: GTGTTCTTGGGGCTGCTCCCATGCAGACAGGATCAC...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCGTGATCCTGTCTGCATaGGAGCAGCCCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGVILSA*EQPQEH
Trigger: GTGTTCTTGGGGCTGCTCCCATGCAGACAGGATCAC...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTAAAGAGGGGGATGGATaGAGAGCTGACTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: GVPGLPWIEWRALVWEDGKEGDG*RADCPE
Trigger: CTCCGGGCAGTCAGCTCTCCATCCATCCCCCTCTTT...ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGAAGCACAGCACTCAGTaGCTCGGGGATGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLKHSTQ*LGDVSP
Trigger: CGGGGAAACATCCCCGAGCCACTGAGTGCTGTGCTT...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCAAAGCACAGCACTCAGTaGCTCGGGGATGTTTCCCCG +
Preference number: 4 (lower is better)
Translates to: GEVYRHGCLLLALLSPRAKHSTQ*LGDVSP
Trigger: CGGGGAAACATCCCCGAGCCACTGAGTGCTGTGCTT...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGTCCCTATCCCAGATaGGAGATGGGGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVGPYPR*EMGAFP
Trigger: AGGAAAAGCCCCCATCTCCCATCTGGGATAGGGACC...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGTGTGGGATGGGCTGCTaGGAAGGCCAGGGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWCGMGC*EGQGLR
Trigger: TCGGAGCCCCTGGCCTTCCCAGCAGCCCATCCCACA...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGCCGAGTGGGGCCGCATaGAGCTGCCAAAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAPSGAA*SCQSHR
Trigger: CCGATGACTTTGGCAGCTTCATGCGGCCCCACTCGG...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDGSWHL*AKVFMT
Trigger: TGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCC...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVEALRF*SPSGRS
Trigger: AGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTC...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGEALRF*SPSGRS
Trigger: AGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
60% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALEALRF*SPSGRS
Trigger: AGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTC...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGACGGAGGCCAAATCTaGAATCTGGGCATCATGTGT +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWDGGQI*NLGIMC
Trigger: ACACATGATGCCCAGATTTCAGATTTGGCCTCCGTC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGTCCATCTCTGTTAGGTaGTCCTGTCTGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGSISVR*SCLHGS
Trigger: GCTCCCATGCAGACAGGATCACCTAACAGAGATGGA...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATCAGCACCTGGCAGTGTaGCATAGTCTTCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDQHLAV*HSLPVC
Trigger: GCACACAGGAAGACTATGTCACACTGCCAGGTGCTG...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR TCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCCAGGGAGGCCTCTCTaGCTGCTCCTGCTCACATGG +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARPGRPL*LLLLTW
Trigger: CCATGTGAGCAGGAGCAGTCAGAGAGGCCTCCCTGG...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTGGTCTTGATGTTGCCTaGCCCACCGGGGCGGGCTGG +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLGLDVA*PTGAGW
Trigger: CCAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCTCCGTCCGGAAGGTCTaGTGGACGTGTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCSVRKV*WTCSVC
Trigger: GCATACAGAACACGTCCAGCAGACCTTCCGGACGGA...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTTCCGTCCGGAAGGTCTaGTGGACGTGTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: GVPGLPWIEWRALVWEDGSVRKV*WTCSVC
Trigger: GCATACAGAACACGTCCAGCAGACCTTCCGGACGGA...ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCCTGTCCTGCAGAGCTTaGCCATATGTCCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCLSCRA*PYVLLV
Trigger: GACCAGCAGGACATATGGGCAAGCTCTGCAGGACAG...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGCTGGTCCCCTTGCCCTaGAGAGACTTCATAGATCAG +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWLVPLP*RDFIDQ
Trigger: CTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAG...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTGGTGGGCAGGCAGCCTaGTCGCTGGCGTGGGGCTTG +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPGGQAA*SLAWGL
Trigger: CAAGCCCCACGCCAGCGAGCAGGCTGCCTGCCCACC...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGATGTGGCATGGCTCTaGCCTGGCACAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQADVAWL*PGTASW
Trigger: CCAGCTGGCTGTGCCAGGGCAGAGCCATGCCACATC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCGATGTGGCATGGCTCTaGCCTGGCACAGCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAADVAWL*PGTASW
Trigger: CCAGCTGGCTGTGCCAGGGCAGAGCCATGCCACATC...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGTTAGGTGATCCTGTCTaGATGGGAGCAGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGLGDPV*MGAAPR
Trigger: TCTTGGGGCTGCTCCCATGCAGACAGGATCACCTAA...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGGGATGGAGAGCTGACTaGCCGGAGGGGAAGGTGGCA +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWGWRAD*PEGKVA
Trigger: TGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCC...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCCTCTCTGACTGCTCCTaGTCACATGGGCCCACACCC +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPLSDCS*SHGPTP
Trigger: GGGTGTGGGCCCATGTGAGCAGGAGCAGTCAGAGAG...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCCAGATCAGCTCCAATaGCTCCTCCCCCAGGGAGGC +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARPDQLQ*LLPQGG
Trigger: GCCTCCCTGGGGGAGGAGGCATTGGAGCTGATCTGG...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTCCATGGGCGGGTCCTTaGCCTGGGCCAGGGTGGAGG +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPPWAGP*PGPGWR
Trigger: CCTCCACCCTGGCCCAGGGCAAGGACCCGCCCATGG...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGGCTGTGGGATGGGCTaGTGGGAAGGCCAGGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALGCGMG*WEGQGL
Trigger: GAGCCCCTGGCCTTCCCAGCAGCCCATCCCACAGCC...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTGCCAGGGGCTCCGAGTaGGGCCGCATGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCARGSE*GRMKLP
Trigger: TGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGC...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGCCAGGGGCTCCGAGTaGGGCCGCATGAAGCTGCCA +
Preference number: 4 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALARGSE*GRMKLP
Trigger: TGGCAGCTTCATGCGGCCCCACTCGGAGCCCCTGGC...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CAGGTCCCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGCCTGCTCGCTGGCGTaGGGCTTGGAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: QVPGPLALQRLHRSEGLSACSLA*GLEAGR
Trigger: TCTACCAGCCTCCAAGCCCCACGCCAGCGAGCAGGC...AGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTAGGCAGCCTGCTCGCTaGCGTGGGGCTTGGAGGCTG +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLRQPAR*RGAWRL
Trigger: CAGCCTCCAAGCCCCACGCCAGCGAGCAGGCTGCCT...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCTATACAGATGTGGCATaGCTCTGCCCTGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCYTDVA*LCPGTA
Trigger: GGCTGTGCCAGGGCAGAGCCATGCCACATCTGTATA...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGGCCCGGAGGGGAAGGTaGCAAGAAGCTGGGGTCCAA +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARARRGR*QEAGVQ
Trigger: TTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGGC...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCCTATCCCAGATaGGAGATGGGGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDGPYPR*EMGAFP
Trigger: AGGAAAAGCCCCCATCTCCCATCTGGGATAGGGACC...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGGGGGATGGATGGAGAGCTGACTGCCCGGAGGGGAAGGTGGCAAGAAGCTGGGGAAACCAAGAGTCATTaGGGGCAGCAGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: RGMDGELTARRGRWQEAGETKSH*GQQAFP
Trigger: GGGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTC...CCCAGCTTCTTGCCACCTTCCCCTCCGGGCAGTCAGCTCTCCATCCATCCCCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTCAGGGCCTTCTCCATaGGCGGGTCCTTGCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHSGPSP*AGPCPG
Trigger: CCCAGGGCAAGGACCCGCCCATGGAGAAGGCCCTGA...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR TCA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCCCGAGTGGGGCCGCATaGAGCTGCCAAAGTCATCGG +
Preference number: 4 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSPSGAA*SCQSHR
Trigger: CCGATGACTTTGGCAGCTTCATGCGGCCCCACTCGG...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEARLLGS*CCLPHR
Trigger: CCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACG...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTG +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSECSVCG*RRARIV
Trigger: CACTATCCGGGCACGGCGTCACCCGCATACAGAACA...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTG +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARCSVCG*RRARIV
Trigger: CACTATCCGGGCACGGCGTCACCCGCATACAGAACA...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGCACCCTAAGGCACACTaGCCAGAGAGGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWHPKAH*PERHGG
Trigger: CCCTCCATGCCTCTCTGGTCAGTGTGCCTTAGGGTG...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGAGTTTCTCTTTTGTCTaGGCCCCCTACAACCCAGTC +
Preference number: 4 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRSFSFV*APYNPV
Trigger: GACTGGGTTGTAGGGGGCTCAGACAAAAGAGAAACT...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGAGTCATCGGAAAACATaGTCAGGGCCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGSHRKT*SGPSPW
Trigger: CCATGGAGAAGGCCCTGAGCATGTTTTCCGATGACT...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000487046.1
CDS-3UTR GCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAAGTCATCGGAAAACATaGTCAGGGCCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALSHRKT*SGPSPW
Trigger: CCATGGAGAAGGCCCTGAGCATGTTTTCCGATGACT...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000487046.1
CDS-3UTR GCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAAGTCATCGGAAAACATaGTCAGGGCCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGSHRKT*SGPSPW
Trigger: CCATGGAGAAGGCCCTGAGCATGTTTTCCGATGACT...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000487046.1
CDS-3UTR GCA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGTCTGTCTGTCTGTCCTaGAGAGCTTGCCCATATGTC +
Preference number: 4 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRSVCLS*RACPYV
Trigger: GACATATGGGCAAGCTCTGCAGGACAGACAGACAGA...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGCTGGTCCCCTTGCCCTaGAGAGACTTCATAGATCAG +
Preference number: 4 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLLVPLP*RDFIDQ
Trigger: CTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAG...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCATTAGGTGATCCTGTCTaGATGGGAGCAGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GEVYRHGCLLLALLSPRALGDPV*MGAAPR
Trigger: TCTTGGGGCTGCTCCCATGCAGACAGGATCACCTAA...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGAAGAGGAAGAGGAATaGAAACTTCTCTCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGEEEEE*KLLSAR
Trigger: CCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
59% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAGAAGAGGAAGAGGAATaGAAACTTCTCTCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGEEEEE*KLLSAR
Trigger: CCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTC...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATGCCCGCACCTCGATGTaGTTGTTGGAGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: SEIWASCVRPGSPWPALDARTSM*LLEVVT
Trigger: TGTCACCACCTCCAACAACCACATCGAGGTGCGGGC...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000375718.4
CDS-3UTR CCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCGTCCGGAAGGTCTGCTaGACGTGTTCTGTATGCGGG +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPVRKVC*TCSVCG
Trigger: CCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTATGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFGGWST*GLGCVG
Trigger: CCCCACGCACCCCAGACCCCAGGTGGACCATCCTCC...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGGAGGATGGTCCACCTaGGGTCTGGGGTGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIGGWST*GLGCVG
Trigger: CCCCACGCACCCCAGACCCCAGGTGGACCATCCTCC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGCCTAGTTTGGGAGGATaGTCCACCTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAPSLGG*STWGLG
Trigger: CCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGG...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGCCTAGTTTGGGAGGATaGTCCACCTGGGGTCTGGGG +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSEPSLGG*STWGLG
Trigger: CCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGG...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWWRALV*EDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCA...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CAGGTCCCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTAGGCCAGGGAGTCCCTaGCCTGCCCTGGATAGAGTG +
Preference number: 4 (lower is better)
Translates to: QVPGPLALQRLHRSEGLSRPGSP*PALDRV
Trigger: CACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCT...AGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGCCAAATCTGAAATCTaGGCATCATGTGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWAKSEI*ASCVRP
Trigger: TGGCCTGACACATGATGCCCAGATTTCAGATTTGGC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCAAAGAGGGGGATGGATaGAGAGCTGACTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPKEGDG*RADCPE
Trigger: CTCCGGGCAGTCAGCTCTCCATCCATCCCCCTCTTT...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGCCCTGCTTCTGTATGTaGGAGACGAAACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVPCFCM*ETKPRV
Trigger: GACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGTGGGATGGGCTGCTaGGAAGGCCAGGGGCTCCGA +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLCGMGC*EGQGLR
Trigger: TCGGAGCCCCTGGCCTTCCCAGCAGCCCATCCCACA...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPGSWHL*AKVFMT
Trigger: TGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCC...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTG +
Preference number: 4 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHCSVCG*RRARIV
Trigger: CACTATCCGGGCACGGCGTCACCCGCATACAGAACA...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCAGATCTAACCTTCAGTaGCAAAGCACAGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPRSNLQ*QSTALS
Trigger: ACTGAGTGCTGTGCTTTGTCACTGAAGGTTAGATCT...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCCAGAGTGGTGGGAGTaGGAGGCCACCCTAAGGCAC +
Preference number: 4 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCPEWWE*EATLRH
Trigger: GTGCCTTAGGGTGGCCTCTCACTCCCACCACTCTGG...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCC +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPMRVTP*PDSEAA
Trigger: GGCAGCCTCACTATCCGGGCACGGCGTCACCCGCAT...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATTCCGTCCGGAAGGTCTaGTGGACGTGTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: SEIWASCVRPGSPWPALDSVRKV*WTCSVC
Trigger: GCATACAGAACACGTCCAGCAGACCTTCCGGACGGA...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATCTTGCCCATATGTCCTaGTGGTCCCATTCCCCTGAC +
Preference number: 4 (lower is better)
Translates to: SEIWASCVRPGSPWPALDLAHMS*WSHSPD
Trigger: GTCAGGGGAATGGGACCAGCAGGACATATGGGCAAG...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGTCTGTCTGTCTGTCCTaGAGAGCTTGCCCATATGTC +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLSVCLS*RACPYV
Trigger: GACATATGGGCAAGCTCTGCAGGACAGACAGACAGA...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTAACCCCACTTGGCCTTaGCTGGAGGCCCCAGCAGGC +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCINPTWP*LEAPAG
Trigger: GCCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTT...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp AGAGTCATTGGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCCCCCTTCCCCTCCACCCTaGTTCTGTATGTGGGAGACG +
Preference number: 4 (lower is better)
Translates to: RVIGGSRHFPGLRLMEGPPSPPP*FCMWET
Trigger: CGTCTCCCACATACAGAAGCAGGGTGGAGGGGAAGG...GGGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGCCCGCACCTCGATGTaGTTGTTGGAGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAARTSM*LLEVVT
Trigger: TGTCACCACCTCCAACAACCACATCGAGGTGCGGGC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000487046.1
CDS-3UTR CCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGTCCGGAAGGTCTGCTaGACGTGTTCTGTATGCGGG +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAVRKVC*TCSVCG
Trigger: CCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQALPWIE*RALVWE
Trigger: CTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAG...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGCTGCCCTGGATAGAGTaGAGGGCCCTAGTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSELPWIE*RALVWE
Trigger: CTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAG...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGCCAAATCTGAAATCTaGGCATCATGTGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGAKSEI*ASCVRP
Trigger: TGGCCTGACACATGATGCCCAGATTTCAGATTTGGC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCCCATATGTCCTGCTaGTCCCATTCCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSEAHMSC*SHSPDP
Trigger: TGGGTCAGGGGAATGGGACCAGCAGGACATATGGGC...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTGCCTGCTCGCTGGCGTaGGGCTTGGAGGCTGGTAGA +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPACSLA*GLEAGR
Trigger: TCTACCAGCCTCCAAGCCCCACGCCAGCGAGCAGGC...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATTATACAGATGTGGCATaGCTCTGCCCTGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: SEIWASCVRPGSPWPALDYTDVA*LCPGTA
Trigger: GGCTGTGCCAGGGCAGAGCCATGCCACATCTGTATA...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAATCTATATACAGATGTaGCATGGCTCTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGIYIQM*HGSALA
Trigger: TGCCAGGGCAGAGCCATGCCACATCTGTATATAGAT...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGATCTATATACAGATGTaGCATGGCTCTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: RVEGPSLGGWSTWGLGCVIYIQM*HGSALA
Trigger: TGCCAGGGCAGAGCCATGCCACATCTGTATATAGAT...CACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGAAGAACACAGGCCTGTaGGAGGGAGAAGGACCAGCC +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWKNTGL*EGEGPA
Trigger: GGCTGGTCCTTCTCCCTCCCACAGGCCTGTGTTCTT...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGAAGGTGGCAAGAAGCTaGGGTCCAACCTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWKVARS*GPTSRT
Trigger: GGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTT...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCAAGGTGGCAAGAAGCTaGGGTCCAACCTCGAGGACC +
Preference number: 4 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAAKVARS*GPTSRT
Trigger: GGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTT...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAGTCATTGGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCCCAAAGAGGGGGATGGATaGAGAGCTGACTGCCCGGAG +
Preference number: 4 (lower is better)
Translates to: RVIGGSRHFPGLRLMEGPKEGDG*RADCPE
Trigger: CTCCGGGCAGTCAGCTCTCCATCCATCCCCCTCTTT...GGGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCCCCTGCTTCTGTATGTaGGAGACGAAACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCPCFCM*ETKPRV
Trigger: GACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATGAGGCTGACTTGCCCTaGGGACCCCTGCTAACTGAG +
Preference number: 4 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHEADLP*GPLLTE
Trigger: CTCAGTTAGCAGGGGTCCCCAGGGCAAGTCAGCCTC...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGG +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIRLLGS*CCLPHR
Trigger: CCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACG...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCA +
Preference number: 4 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALERRCS*QCRQPP
Trigger: TGGCGGCTGACGGCACTGTCATGAACACCTTCGCTC...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSEGSWHL*AKVFMT
Trigger: TGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCC...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAGSWHL*AKVFMT
Trigger: TGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACA +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARGSWHL*AKVFMT
Trigger: TGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCC...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGTAATGCTGAGTATTTaGAGGACAACGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWVMLSI*RTTIGV
Trigger: CACCCCTATCGTTGTCCTTCAAATACTCAGCATTAC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGCTTAGAGAGGTAGAATaGGGGGAAATACTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWLREVE*GEILLS
Trigger: ACTGAGGAGTATTTCCCCTCATTCTACCTCTCTAAG...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTCACCCTAAGGCACACTaGCCAGAGAGGCATGGAGGG +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLHPKAH*PERHGG
Trigger: CCCTCCATGCCTCTCTGGTCAGTGTGCCTTAGGGTG...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGCTGTCCTGCAGAGCTTaGCCATATGTCCTGCTGGTC +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQALSCRA*PYVLLV
Trigger: GACCAGCAGGACATATGGGCAAGCTCTGCAGGACAG...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTCATAGTCTTCCTGTGTaGTGTGACTCTCTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: ARSWGPTSRTQSPIHALAHSLPV*CDSLLC
Trigger: ACACAGCAGAGAGTCACAGCACACAGGAAGACTATG...AGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR CCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGAGGGCCCTAGTTTaGGAGGATGGTCCACCTGGG +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLWRALV*EDGPPG
Trigger: CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCA...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CAGGTCCCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTCCCAGCTGGAAGACGTaGGGAGGGTTGCATAGCCTT +
Preference number: 4 (lower is better)
Translates to: QVPGPLALQRLHRSEGLSPSWKT*GGLHSL
Trigger: AAGGCTATGCAACCCTCCCCACGTCTTCCAGCTGGG...AGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCGAAACCAAGAGTCATTaGGGGCAGCAGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPETKSH*GQQAFP
Trigger: GGGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTC...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTG +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCICSVCG*RRARIV
Trigger: CACTATCCGGGCACGGCGTCACCCGCATACAGAACA...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAEALRF*SPSGRS
Trigger: AGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSEEALRF*SPSGRS
Trigger: AGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTC...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGTCCATCTCTGTTAGGTaGTCCTGTCTGCATGGGAGC +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSESISVR*SCLHGS
Trigger: GCTCCCATGCAGACAGGATCACCTAACAGAGATGGA...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGAGATCTAACCTTCAGTaGCAAAGCACAGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLRSNLQ*QSTALS
Trigger: ACTGAGTGCTGTGCTTTGTCACTGAAGGTTAGATCT...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCTTAGAGAGGTAGAATaGGGGGAAATACTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: GVPGLPWIEWRALVWEDGLREVE*GEILLS
Trigger: ACTGAGGAGTATTTCCCCTCATTCTACCTCTCTAAG...ACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGCTTAGAGAGGTAGAATaGGGGGAAATACTCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLLREVE*GEILLS
Trigger: ACTGAGGAGTATTTCCCCTCATTCTACCTCTCTAAG...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGTTAGGTGATCCTGTCTaGATGGGAGCAGCCCCAAGA +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARLGDPV*MGAAPR
Trigger: TCTTGGGGCTGCTCCCATGCAGACAGGATCACCTAA...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAGTCATTGGGGGCAGCAGGCATTTCCCAGGGTTAAGGCTGATGGAAGGTCCCGAAACCAAGAGTCATTaGGGGCAGCAGGCATTTCCC +
Preference number: 4 (lower is better)
Translates to: RVIGGSRHFPGLRLMEGPETKSH*GQQAFP
Trigger: GGGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTC...GGGACCTTCCATCAGCCTTAACCCTGGGAAATGCCTGCTGCCCCCAATGACTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGGACGGAGGCCAAATCTaGAATCTGGGCATCATGTGT +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARDGGQI*NLGIMC
Trigger: ACACATGATGCCCAGATTTCAGATTTGGCCTCCGTC...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTTCCTCTTGGCCTTGCTaGGCCCTCGGGCAATTAGTT +
Preference number: 4 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCSSWPC*ALGQLV
Trigger: AACTAATTGCCCGAGGGCTCAGCAAGGCCAAGAGGA...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCTCTTCCTGTGTGCTGTaGCTCTCTGCTGTGTCCCTT +
Preference number: 4 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSSSCVL*LSAVSL
Trigger: AAGGGACACAGCAGAGAGTCACAGCACACAGGAAGA...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR TCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTAGATGCCCCCAGCACTaGCTGTCTTTGTCCTCCCAC +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIRCPQH*LSLSSH
Trigger: GTGGGAGGACAAAGACAGTCAGTGCTGGGGGCATCT...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGAGTCATCGGAAAACATaGTCAGGGCCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: GARTWAEMSWSCCNGVSESHRKT*SGPSPW
Trigger: CCATGGAGAAGGCCCTGAGCATGTTTTCCGATGACT...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000487046.1
CDS-3UTR GCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTCCTTCCCCTCCACCCTaGTTCTGTATGTGGGAGACG +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPPSPPP*FCMWET
Trigger: CGTCTCCCACATACAGAAGCAGGGTGGAGGGGAAGG...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGTGTGCTGTGACTCTCTaGTGTGTCCCTTCTTCCCTA +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWCAVTL*CVPSSL
Trigger: TAGGGAAGAAGGGACACAGCAGAGAGTCACAGCACA...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR CCA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGAAGAGGAAGAGGAATaGAAACTTCTCTCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWEEEEE*KLLSAR
Trigger: CCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTC...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000411503.5
ENST00000487046.1
CDS-3UTR CCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTGCCCGCACCTCGATGTaGTTGTTGGAGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPARTSM*LLEVVT
Trigger: TGTCACCACCTCCAACAACCACATCGAGGTGCGGGC...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000375718.4
CDS-3UTR CCA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCGCCCATATGTCCTGCTaGTCCCATTCCCCTGACCCA +
Preference number: 4 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFAHMSC*SHSPDP
Trigger: TGGGTCAGGGGAATGGGACCAGCAGGACATATGGGC...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCATCTATATACAGATGTaGCATGGCTCTGCCCTGGCA +
Preference number: 4 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPIYIQM*HGSALA
Trigger: TGCCAGGGCAGAGCCATGCCACATCTGTATATAGAT...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTGCCGCCAGCTCGATGTaGTTGTTGGAGGTGGTGACA +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPAASSM*LLEVVT
Trigger: TGTCACCACCTCCAACAACCACATCGAGCTGGCGGC...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000411503.5
CDS-3UTR TCA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCT +
Preference number: 4 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALEALRF*SPSGRS
Trigger: AGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTC...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR TCA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTGTCTCCCCATTAGATTaGAGGTTCTTGAAGACGGGC +
Preference number: 4 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEAVSPLD*RFLKTG
Trigger: GCCCGTCTTCAAGAACCTTCAATCTAATGGGGAGAC...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR GCA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCAGTCATCGGAAAACATaGTCAGGGCCTTCTCCATGG +
Preference number: 4 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSSHRKT*SGPSPW
Trigger: CCATGGAGAAGGCCCTGAGCATGTTTTCCGATGACT...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp TGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTTCTCCGTCCGGAAGGTCTaGTGGACGTGTTCTGTATGC +
Preference number: 4 (lower is better)
Translates to: CFCMWETKPRVIGGSRHFSVRKV*WTCSVC
Trigger: GCATACAGAACACGTCCAGCAGACCTTCCGGACGGA...GAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATTCTGTCTGTCTGTCCTaGAGAGCTTGCCCATATGTC +
Preference number: 4 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHSVCLS*RACPYV
Trigger: GACATATGGGCAAGCTCTGCAGGACAGACAGACAGA...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR GCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTCTGGTCCCCTTGCCCTaGAGAGACTTCATAGATCAG +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLLVPLP*RDFIDQ
Trigger: CTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAG...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATGAAGAGGAAGAGGAATaGAAACTTCTCTCCGCTCGG +
Preference number: 4 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHEEEEE*KLLSAR
Trigger: CCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTC...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTTATACAGATGTGGCATaGCTCTGCCCTGGCACAGCC +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPYTDVA*LCPGTA
Trigger: GGCTGTGCCAGGGCAGAGCCATGCCACATCTGTATA...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGTGATCCTGTCTGCATaGGAGCAGCCCCAAGAACAC +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIVILSA*EQPQEH
Trigger: GTGTTCTTGGGGCTGCTCCCATGCAGACAGGATCAC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGGTCCCTATCCCAGATaGGAGATGGGGGCTTTTCCT +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIGPYPR*EMGAFP
Trigger: AGGAAAAGCCCCCATCTCCCATCTGGGATAGGGACC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTCTGTCCTCCCTACAACCCAGTCTaGAGCTTCATCCTGGAGAGC +
Preference number: 4 (lower is better)
Translates to: PLPCRDFIDQRVCLSVCPPYNPV*SFILES
Trigger: GCTCTCCAGGATGAAGCTCCAGACTGGGTTGTAGGG...AGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375718.4
3UTR CAA 72 bp CCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTaGTCTGTCTGTCTGTCCTGCAGAGCTTGCCCATAT +
Preference number: 4 (lower is better)
Translates to: PLALQRLHRSEG*SVCLSCRACPY
Trigger: ATATGGGCAAGCTCTGCAGGACAGACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGACGGAGGCCAAATCTaGAATCTGGGCATCATGTGT +
Preference number: 4 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALDGGQI*NLGIMC
Trigger: ACACATGATGCCCAGATTTCAGATTTGGCCTCCGTC...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGTACTCTGGATTAAGTaGCGGAGGCCAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAVLWIK*RRPNLK
Trigger: TTTCAGATTTGGCCTCCGTCACTTAATCCAGAGTAC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCGTACTCTGGATTAAGTaGCGGAGGCCAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAAVLWIK*RRPNLK
Trigger: TTTCAGATTTGGCCTCCGTCACTTAATCCAGAGTAC...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGGTAATGCTGAGTATTTaGAGGACAACGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARVMLSI*RTTIGV
Trigger: CACCCCTATCGTTGTCCTTCAAATACTCAGCATTAC...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATGATTTGAGAAAGCTCTaGATTTGGCCTCAACCAATG +
Preference number: 4 (lower is better)
Translates to: SEIWASCVRPGSPWPALDDLRKL*IWPQPM
Trigger: CATTGGTTGAGGCCAAATTCAGAGCTTTCTCAAATC...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGGGCTGAGATGTCCTaGAGCTGTTGTAATGGGGTT +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLWAEMS*SCCNGV
Trigger: AACCCCATTACAACAGCTCCAGGACATCTCAGCCCA...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CCA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCAACGAACCAGCTGTATTaGAAAAACCCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: GEVYRHGCLLLALLSPRATNQLY*KNPIYI
Trigger: TATATAGATGGGGTTTTTCCAATACAGCTGGTTCGT...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATACGAACCAGCTGTATTaGAAAAACCCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDTNQLY*KNPIYI
Trigger: TATATAGATGGGGTTTTTCCAATACAGCTGGTTCGT...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCCCTGCTTCTGTATGTaGGAGACGAAACCAAGAGTC +
Preference number: 4 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALPCFCM*ETKPRV
Trigger: GACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGGATTTGAGAAAGCTCTaGATTTGGCCTCAACCAATG +
Preference number: 4 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWDLRKL*IWPQPM
Trigger: CATTGGTTGAGGCCAAATTCAGAGCTTTCTCAAATC...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCGATTTGAGAAAGCTCTaGATTTGGCCTCAACCAATG +
Preference number: 4 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAADLRKL*IWPQPM
Trigger: CATTGGTTGAGGCCAAATTCAGAGCTTTCTCAAATC...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTGCCAAATCTGAAATCTaGGCATCATGTGTCAGGCCA +
Preference number: 4 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLAKSEI*ASCVRP
Trigger: TGGCCTGACACATGATGCCCAGATTTCAGATTTGGC...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTGTACTCTGGATTAAGTaGCGGAGGCCAAATCTGAAA +
Preference number: 4 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCVLWIK*RRPNLK
Trigger: TTTCAGATTTGGCCTCCGTCACTTAATCCAGAGTAC...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp CCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTGTCTGTAGATCTAACCTTCAGTaGCAAAGCACAGCACTCAGT +
Preference number: 4 (lower is better)
Translates to: PGPLALQRLHRSEGLSVCRSNLQ*QSTALS
Trigger: ACTGAGTGCTGTGCTTTGTCACTGAAGGTTAGATCT...ACAGACAGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR TCA 90 bp AGCAGGCGCAGGACGGCAGGAGTTTCATGCAGTTTATCACGAACCAGCTGTATTGTAATGCTGAGTATTTaGAGGACAACGATAGGGGTG +
Preference number: 4 (lower is better)
Translates to: SRRRTAGVSCSLSRTSCIVMLSI*RTTIGV
Trigger: CACCCCTATCGTTGTCCTTCAAATACTCAGCATTAC...AATACAGCTGGTTCGTGATAAACTGCATGAAACTCCTGCCGTCCTGCGCCTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CCA 90 bp CAGGTCCCTGGTCCCCTTGCCCTGCAGAGACTTCATAGATCAGAGGGTTTGTCTACGAACCAGCTGTATTaGAAAAACCCCATCTATATA +
Preference number: 4 (lower is better)
Translates to: QVPGPLALQRLHRSEGLSTNQLY*KNPIYI
Trigger: TATATAGATGGGGTTTTTCCAATACAGCTGGTTCGT...AGACAAACCCTCTGATCTATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
3UTR CAA 72 bp CTGAATTTGGCCTCAACCAATGGTAATGCTGAGTATTaGAAGGACAACGATAGGGGTGTGTGTGTTACACAC +
Preference number: 4 (lower is better)
Translates to: LNLASTNGNAEY*KDNDRGVCVTH
Trigger: GTGTGTAACACACACACCCCTATCGTTGTCCTTCAAATACTCAGCATTACCATTGGTTGAGGCCAAATTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS GCA 90 bp GGTCTTGATGTTGCCTGCCCCACCGGGGCGGGCTGTGGGATGGGCTaGTGTGAGCGAGGCATGGAGCAGGCCTTGCATGCAGATCCGGGG +
Preference number: 5 (lower is better)
Translates to: GLDVACPTGAGCGMG*CERGMEQALHADPG
Trigger: CCCCGGATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCCACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
68% GC, longest homopolymer 9 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS GCA 90 bp CGTCCGGAAGGTCTGCTGGACGTGTTCTGTATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCCGTCCTCCCGCAGAGCCGAGGTCAC +
Preference number: 5 (lower is better)
Translates to: RPEGLLDVFCMRVTP*PDSEAAVLPQSRGH
Trigger: GTGACCTCGGCTCTGCGGGAGGACGGCAGCCTCACTATCCGGGCACGGCGTCACCCGCATACAGAACACGTCCAGCAGACCTTCCGGACG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGCCTAGGGTCTTGATGTaGCCTGCCCCACCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGPRVLM*PAPPGR
Trigger: CCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGG...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGACCTAGGGTCTTGATGTaGCCTGCCCCACCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGPRVLM*PAPPGR
Trigger: CCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGG...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGCAACCCCACTTGGCCTaGCCTGGAGGCCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGQPHLA*PGGPSR
Trigger: CCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTTG...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGCAACCCCACTTGGCCTaGCCTGGAGGCCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRQPHLA*PGGPSR
Trigger: CCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTTG...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCATCCATGGGCGGGTCCTaGCCCTGGGCCAGGGTGGAG +
Preference number: 5 (lower is better)
Translates to: GEVYRHGCLLLALLSPRASMGGS*PWARVE
Trigger: CTCCACCCTGGCCCAGGGCAAGGACCCGCCCATGGA...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS GCA 90 bp CCCTGGGCCAGGGTGGAGGCCATTCTGAGAGGCGGCCAGGCCCTCTaGTCTGCCCAGGTTGCAGTTAAGGGCCTCTGCTGTCCTCTCCAA +
Preference number: 5 (lower is better)
Translates to: PWARVEAILRGGQAL*SAQVAVKGLCCPLQ
Trigger: TTGGAGAGGACAGCAGAGGCCCTTAACTGCAACCTGGGCAGAGCAGAGGGCCTGGCCGCCTCTCAGAATGGCCTCCACCCTGGCCCAGGG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS GCA 90 bp CGGGCTGTGGGATGGGCTGCTGTGAGCGAGGCATGGAGCAGGCCTTaGATGCAGATCCGGGGGTTCTGGCTCCTTCTCTTGGGGCAAGGG +
Preference number: 5 (lower is better)
Translates to: RAVGWAAVSEAWSRP*MQIRGFWLLLLGQG
Trigger: CCCTTGCCCCAAGAGAAGGAGCCAGAACCCCCGGATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCCACAGCCCG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS CCA 90 bp CCTAGGGTCTTGATGTTGCCTGCCCCACCGGGGCGGGCTGTGGGATaGGCTGCTGTGAGCGAGGCATGGAGCAGGCCTTGCATGCAGATC +
Preference number: 5 (lower is better)
Translates to: PRVLMLPAPPGRAVG*AAVSEAWSRPCMQI
Trigger: GATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCCACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS-3UTR CAA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATCCTAGGGTCTTGATGTaGCCTGCCCCACCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDPRVLM*PAPPGR
Trigger: CCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGG...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCGCGTCTCCTAGGGTCTaGATGTTGCCTGCCCCACCG +
Preference number: 5 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPASPRV*MLPAPP
Trigger: CGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGC...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS TCA 90 bp TTGATCTCCGTCCGGAAGGTCTGCTGGACGTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTGAGGCTGCCGTCCTCCCGCAGAGCC +
Preference number: 5 (lower is better)
Translates to: LISVRKVCWTCSVCG*RRARIVRLPSSRRA
Trigger: GGCTCTGCGGGAGGACGGCAGCCTCACTATCCGGGCACGGCGTCACCCGCATACAGAACACGTCCAGCAGACCTTCCGGACGGAGATCAA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS TCA 90 bp GAGGTCACCGACGTCGGGTCCACGTCCTCCGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACAGTGCCGTCAGCCGCCAGCTCGATG +
Preference number: 5 (lower is better)
Translates to: EVTDVGSTSSGSWHL*AKVFMTVPSAASSM
Trigger: CATCGAGCTGGCGGCTGACGGCACTGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCCGGAGGACGTGGACCCGACGTCGGTGACCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411503.5
ENST00000463576.5
CDS CCA 90 bp TGGGCGGGTCCTGGGCCGGGAGAGCACGGGAGGCCGAGGAGGAGGTaGAAGAGGAGGAGGAAGAGGAAGAGGAATGGAAACTTCTCTCCG +
Preference number: 5 (lower is better)
Translates to: WAGPGPGEHGRPRRR*KRRRKRKRNGNFSP
Trigger: CGGAGAGAAGTTTCCATTCCTCTTCCTCTTCCTCCTCCTCTTCCACCTCCTCCTCGGCCTCCCGTGCTCTCCCGGCCCAGGACCCGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS CCA 90 bp AAGTCATCGGAAAACATGCTCAGGGCCTTCTCCATGGGCGGGTCCTaGGCCGGGAGAGCACGGGAGGCCGAGGAGGAGGTGGAAGAGGAG +
Preference number: 5 (lower is better)
Translates to: KSSENMLRAFSMGGS*AGRAREAEEEVEEE
Trigger: CTCCTCTTCCACCTCCTCCTCGGCCTCCCGTGCTCTCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGAGCATGTTTTCCGATGACTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGCGTCTCCTAGGGTCTaGATGTTGCCTGCCCCACCG +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGASPRV*MLPAPP
Trigger: CGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
64% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp CCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGAGCGTCTCCTAGGGTCTaGATGTTGCCTGCCCCACCG +
Preference number: 5 (lower is better)
Translates to: PGSPWPALDRVEGPSLGGASPRV*MLPAPP
Trigger: CGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGC...TCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp GGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: GLPWIEWRALVWEDGPPGVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...CCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCTCCCTCCCACTCCCCTaGGCCAAGAGGGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGSLPLP*AKRVPG
Trigger: ACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGGA...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS TCA 90 bp GAGGTCACCGACGTCGGGTCCACGTCCTCCGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACAGTGCCGTCAGCCGCCAGCTTCTCA +
Preference number: 5 (lower is better)
Translates to: EVTDVGSTSSGSWHL*AKVFMTVPSAASFS
Trigger: TGAGAAGCTGGCGGCTGACGGCACTGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCCGGAGGACGTGGACCCGACGTCGGTGACCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000442459.2
ENST00000487046.1
CDS TCA 90 bp AGTCTCTCACGTCCACCGCAAACTCATAGGCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGGGGCGGGCTGTGGGATGGGCTGGGA +
Preference number: 5 (lower is better)
Translates to: SLSRPPQTHRRLLGS*CCLPHRGGLWDGLG
Trigger: TCCCAGCCCATCCCACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGCCTATGAGTTTGCGGTGGACGTGAGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406363.2
CDS TCA 90 bp AGTCTCTCACGTCCACCGCAAACTCATAGGCGTCTCCTAGGGTCTTaGTGTTGCCTGCCCCACCGGGGCGGGCTGTGGGATGGGCTGCTG +
Preference number: 5 (lower is better)
Translates to: SLSRPPQTHRRLLGS*CCLPHRGGLWDGLL
Trigger: CAGCAGCCCATCCCACAGCCCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGCCTATGAGTTTGCGGTGGACGTGAGAGACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS GCA 90 bp GGCGGCCAGGCCCTCTGCTCTGCCCAGGTTGCAGTTAAGGGCCTCTaGTGTCCTCTCCAAATCCGTCCCTTCCGTCCCAGATCAGCTCCA +
Preference number: 5 (lower is better)
Translates to: GGQALCSAQVAVKGL*CPLQIRPFRPRSAP
Trigger: TGGAGCTGATCTGGGACGGAAGGGACGGATTTGGAGAGGACAGCAGAGGCCCTTAACTGCAACCTGGGCAGAGCAGAGGGCCTGGCCGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR CAA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATTCCCTCCCACTCCCCTaGGCCAAGAGGGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDSLPLP*AKRVPG
Trigger: ACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGGA...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCCTAGGGTCTTGATGTaGCCTGCCCCACCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWPRVLM*PAPPGR
Trigger: CCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGG...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp CCCGGAGGGGAAGGTGGCAAGAAGCTGGGGTCCAACCTCGAGGACCCAAAGCCCCGCACCTCGATGTGGTaGTTGGAGGTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: PGGEGGKKLGSNLEDPKPRTSMW*LEVVTM
Trigger: CATTGTCACCACCTCCAACAACCACATCGAGGTGCG...GGGCTTTGGGTCCTCGAGGTTGGACCCCAGCTTCTTGCCACCTTCCCCTCCGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000311890.14
ENST00000375718.4
CDS-3UTR CAA 90 bp GAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCGTGGCGCACCTCGATGTGGTaGTTGGAGGTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: EWRALVWEDGPPGVWGAWRTSMW*LEVVTM
Trigger: CATTGTCACCACCTCCAACAACCACATCGAGGTGCG...CCACGCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000487046.1
CDS-3UTR CAA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCGGGGTTAGCGAGGCTTaGCTGGCAGGCGTGGGGCGG +
Preference number: 5 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSGVSEA*LAGVGR
Trigger: CCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCC...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGTGTCTCCTCTTGGCCTaGCTGAGCCCTCGGGCAATT +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGCLLLA*LSPRAI
Trigger: AATTGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACA...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGGAAGTTTACCGTCACGGCTGTCTCCTCTTGGCCTTGCTGAGCCCTCGGGCACCCAGAGGTGGGGAGTaGAGAGCAGCAGTTGACACC +
Preference number: 5 (lower is better)
Translates to: GEVYRHGCLLLALLSPRAPRGGE*RAAVDT
Trigger: GGTGTCAACTGCTGCTCTCAACTCCCCACCTCTGGG...TGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACAGCCGTGACGGTAAACTTCCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCCCCAGAGGTGGGGAGTaGAGAGCAGCAGTTGACACC +
Preference number: 5 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCPRGGE*RAAVDT
Trigger: GGTGTCAACTGCTGCTCTCAACTCCCCACCTCTGGG...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS CCA 90 bp AGGAGGAAGAGGAAGAGGAATGGAAACTTCTCTCCGCTCGGAAGGTaGAAGAGGTTCTGTGGCTCATCCACGGACGGCGCCGGGCCCTGC +
Preference number: 5 (lower is better)
Translates to: RRKRKRNGNFSPLGR*KRFCGSSTDGAGPC
Trigger: GCAGGGCCCGGCGCCGTCCGTGGATGAGCCACAGAACCTCTTCCACCTTCCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTCCTCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS-3UTR CAA 90 bp CCCTGCTTCTGTATGTGGGAGACGAAACCAAGAGTCATTGGGGGCAGCAGGCATCCTAGGGTCTTGATGTaGCCTGCCCCACCGGGGCGG +
Preference number: 5 (lower is better)
Translates to: PCFCMWETKPRVIGGSRHPRVLM*PAPPGR
Trigger: CCGCCCCGGTGGGGCAGGCAACATCAAGACCCTAGG...ATGCCTGCTGCCCCCAATGACTCTTGGTTTCGTCTCCCACATACAGAAGCAGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGCGCACCTCGATGTGGTaGTTGGAGGTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGRTSMW*LEVVTM
Trigger: CATTGTCACCACCTCCAACAACCACATCGAGGTGCG...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000487046.1
CDS-3UTR CAA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: SEIWASCVRPGSPWPALDVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTCAACCCCACTTGGCCTaGCCTGGAGGCCCCAGCAGG +
Preference number: 5 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEAQPHLA*PGGPSR
Trigger: CCTGCTGGGGCCTCCAGGCAAGGCCAAGTGGGGTTG...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGCGAAACCAAGAGTCATaGGGGGCAGCAGGCATTTCC +
Preference number: 5 (lower is better)
Translates to: GSPWPALDRVEGPSLGGWRNQES*GAAGIS
Trigger: GGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCG...CCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTACGAAACCAAGAGTCATaGGGGGCAGCAGGCATTTCC +
Preference number: 5 (lower is better)
Translates to: HVSGQGVPGLPWIEWRALRNQES*GAAGIS
Trigger: GGAAATGCCTGCTGCCCCCAATGACTCTTGGTTTCG...TAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGGCGTCTCCTAGGGTCTaGATGTTGCCTGCCCCACCG +
Preference number: 5 (lower is better)
Translates to: LRCPGAVVMGLARLCWQAASPRV*MLPAPP
Trigger: CGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGC...CGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGRGTQI*ISVRKV
Trigger: GACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCT...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGTGGAGGGCCCTAGTTaGGGAGGATGGTCCACCTGG +
Preference number: 5 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWVEGPS*GGWSTW
Trigger: CCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCAC...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGTCCCTCCCACTCCCCTaGGCCAAGAGGGTTCCAGGT +
Preference number: 5 (lower is better)
Translates to: GARTWAEMSWSCCNGVSESLPLP*AKRVPG
Trigger: ACCTGGAACCCTCTTGGCCAAGGGGAGTGGGAGGGA...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCGCGTCTCCTAGGGTCTaGATGTTGCCTGCCCCACCG +
Preference number: 5 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSASPRV*MLPAPP
Trigger: CGGTGGGGCAGGCAACATCAAGACCCTAGGAGACGC...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: QGVPGLPWIEWRALVWEDRGTQI*ISVRKV
Trigger: GACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCT...ATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCRGTQI*ISVRKV
Trigger: GACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCT...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCCATAGATCAGAGGGTTaGTCTGTCTGTCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGHRSEG*SVCLSC
Trigger: GCAGGACAGACAGACAGACAAACCCTCTGATCTATG...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGTCTCCTCTTGGCCTaGCTGAGCCCTCGGGCAATT +
Preference number: 5 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPCLLLA*LSPRAI
Trigger: AATTGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACA...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCCCAGAGGTGGGGAGTaGAGAGCAGCAGTTGACACC +
Preference number: 5 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWPRGGE*RAAVDT
Trigger: GGTGTCAACTGCTGCTCTCAACTCCCCACCTCTGGG...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGGGGTGCAAGACGTGGGGAGGGTaGCATAGCCTTAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: DRVEGPSLGGWSTWGLGCKTWGG*HSLREV
Trigger: TACCTCTCTAAGGCTATGCAACCCTCCCCACGTCTT...GCACCCCAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS CCA 90 bp GAGGCCGAGGAGGAGGTGGAAGAGGAGGAGGAAGAGGAAGAGGAATaGAAACTTCTCTCCGCTCGGAAGGTGGAAGAGGTTCTGTGGCTC +
Preference number: 5 (lower is better)
Translates to: EAEEEVEEEEEEEEE*KLLSARKVEEVLWL
Trigger: GAGCCACAGAACCTCTTCCACCTTCCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTCCTCCTCCTCTTCCACCTCCTCCTCGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS-3UTR CAA 90 bp GGGGTCCAACCTCGAGGACCCAAAGCCCCATCCATGCCCTGGCTTCCATCTCTGCATAGATCAGAGGGTTaGTCTGTCTGTCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: GVQPRGPKAPSMPWLPSLHRSEG*SVCLSC
Trigger: GCAGGACAGACAGACAGACAAACCCTCTGATCTATG...CAGAGATGGAAGCCAGGGCATGGATGGGGCTTTGGGTCCTCGAGGTTGGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCAGGTCCCTGGTCCCCTaGCCCTGCAGAGACTTCATA +
Preference number: 5 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAARSLVP*PCRDFI
Trigger: TATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCT...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGTCTGCTCTGCCCAGGTaGCAGTTAAGGGCCTCTGCT +
Preference number: 5 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWSALPR*QLRASA
Trigger: AGCAGAGGCCCTTAACTGCAACCTGGGCAGAGCAGA...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR CAA 90 bp AGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGCGCACCTCGATGTGGTaGTTGGAGGTGGTGACAATG +
Preference number: 5 (lower is better)
Translates to: RCPGAVVMGLARLCWQAWRTSMW*LEVVTM
Trigger: CATTGTCACCACCTCCAACAACCACATCGAGGTGCG...CCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000487046.1
CDS-3UTR CAA 90 bp CCAAATCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: PNLKSGHHVSGQGVPGLPRGTQI*ISVRKV
Trigger: GACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCT...GGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGATTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGTCTGTCCTGCAGAGCTaGCCCATATGTCCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWSVLQS*PICPAG
Trigger: ACCAGCAGGACATATGGGCAAGCTCTGCAGGACAGA...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp AGGGTTAAGGCTGATGGAAGGTCCCTATCCCAGATGGGAGATGGGGGCTTTTCCAGGTCCCTGGTCCCCTaGCCCTGCAGAGACTTCATA +
Preference number: 5 (lower is better)
Translates to: RVKADGRSLSQMGDGGFSRSLVP*PCRDFI
Trigger: TATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCT...GGAAAAGCCCCCATCTCCCATCTGGGATAGGGACCTTCCATCAGCCTTAACCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTGTCTCCTCTTGGCCTaGCTGAGCCCTCGGGCAATT +
Preference number: 5 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEACLLLA*LSPRAI
Trigger: AATTGCCCGAGGGCTCAGCAAGGCCAAGAGGAGACA...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGGTAATGCTGAGTATTaGAAGGACAACGATAGGGGT +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGGNAEY*KDNDRG
Trigger: ACCCCTATCGTTGTCCTTCAAATACTCAGCATTACC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
57% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGGTAATGCTGAGTATTaGAAGGACAACGATAGGGGT +
Preference number: 5 (lower is better)
Translates to: GHHVSGQGVPGLPWIEWRGNAEY*KDNDRG
Trigger: ACCCCTATCGTTGTCCTTCAAATACTCAGCATTACC...CCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATAGAGTGGAGGGCGGTAATGCTGAGTATTaGAAGGACAACGATAGGGGT +
Preference number: 5 (lower is better)
Translates to: ASCVRPGSPWPALDRVEGGNAEY*KDNDRG
Trigger: ACCCCTATCGTTGTCCTTCAAATACTCAGCATTACC...GCCCTCCACTCTATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GCCCTGGATAGAGTGGAGGGCCCTAGTTTGGGAGGATGGTCCACCTGGGGTCTGTGTCTCCCCATTAGATaGAAGGTTCTTGAAGACGGG +
Preference number: 5 (lower is better)
Translates to: ALDRVEGPSLGGWSTWGLCLPIR*KVLEDG
Trigger: CCCGTCTTCAAGAACCTTCAATCTAATGGGGAGACA...CAGACCCCAGGTGGACCATCCTCCCAAACTAGGGCCCTCCACTCTATCCAGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS-3UTR CAA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTCTGTCCTGCAGAGCTaGCCCATATGTCCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEASVLQS*PICPAG
Trigger: ACCAGCAGGACATATGGGCAAGCTCTGCAGGACAGA...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGAGGTCCCTGGTCCCCTaGCCCTGCAGAGACTTCATA +
Preference number: 5 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALRSLVP*PCRDFI
Trigger: TATGAAGTCTCTGCAGGGCAAGGGGACCAGGGACCT...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCAGGCGTGGGGCGGGGGGAGAAAGCTCTGAATTaGGCCTCAACCAATGGTAAT +
Preference number: 5 (lower is better)
Translates to: WSCCNGVSEALLAGVGRGEKALN*ASTNGN
Trigger: ATTACCATTGGTTGAGGCCAAATTCAGAGCTTTCTC...CCCCCGCCCCACGCCTGCCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCA
56% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGAAGACGTGGGGAGGGTaGCATAGCCTTAGAGAGGTA +
Preference number: 5 (lower is better)
Translates to: GLEPGLRCPGAVVMGLARKTWGG*HSLREV
Trigger: TACCTCTCTAAGGCTATGCAACCCTCCCCACGTCTT...CCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: ARTWAEMSWSCCNGVSEARGTQI*ISVRKV
Trigger: GACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCT...AGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTCTGTCCTGCAGAGCTaGCCCATATGTCCTGCTGGT +
Preference number: 5 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLSVLQS*PICPAG
Trigger: ACCAGCAGGACATATGGGCAAGCTCTGCAGGACAGA...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTC +
Preference number: 5 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALRGTQI*ISVRKV
Trigger: GACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCT...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
ENST00000463576.5
ENST00000487046.1
CDS-3UTR CAA 90 bp AGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCATAGATCAGAGGGTTaGTCTGTCTGTCTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: RTWAEMSWSCCNGVSEALHRSEG*SVCLSC
Trigger: GCAGGACAGACAGACAGACAAACCCTCTGATCTATG...CAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TCTGAAATCTGGGCATCATGTGTCAGGCCAGGGAGTCCCTGGCCTGCCCTGGATGAGAAAGCTCTGAATTaGGCCTCAACCAATGGTAAT +
Preference number: 5 (lower is better)
Translates to: SEIWASCVRPGSPWPALDEKALN*ASTNGN
Trigger: ATTACCATTGGTTGAGGCCAAATTCAGAGCTTTCTC...ATCCAGGGCAGGCCAGGGACTCCCTGGCCTGACACATGATGCCCAGATTTCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp TCCATGCCCTGGCTTCCATCTCTGTTAGGTGATCCTGTCTGCATGGGAGCAGCCCACGAACCAGCTGTATaGGAAAAACCCCATCTATAT +
Preference number: 5 (lower is better)
Translates to: SMPWLPSLLGDPVCMGAAHEPAV*EKPHLY
Trigger: ATATAGATGGGGTTTTTCCAATACAGCTGGTTCGTG...GGCTGCTCCCATGCAGACAGGATCACCTAACAGAGATGGAAGCCAGGGCATGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp GGGGCTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGCACGAACCAGCTGTATaGGAAAAACCCCATCTATAT +
Preference number: 5 (lower is better)
Translates to: GARTWAEMSWSCCNGVSEHEPAV*EKPHLY
Trigger: ATATAGATGGGGTTTTTCCAATACAGCTGGTTCGTG...CTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAGCCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTTGCTGGCACGAACCAGCTGTATaGGAAAAACCCCATCTATAT +
Preference number: 5 (lower is better)
Translates to: PGLRCPGAVVMGLARLCWHEPAV*EKPHLY
Trigger: ATATAGATGGGGTTTTTCCAATACAGCTGGTTCGTG...CCAGCAAAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS-3UTR CAA 90 bp CTAGAACCTGGGCTGAGATGTCCTGGAGCTGTTGTAATGGGGTTAGCGAGGCTTGAGAAAGCTCTGAATTaGGCCTCAACCAATGGTAAT +
Preference number: 5 (lower is better)
Translates to: LEPGLRCPGAVVMGLARLEKALN*ASTNGN
Trigger: ATTACCATTGGTTGAGGCCAAATTCAGAGCTTTCTC...AAGCCTCGCTAACCCCATTACAACAGCTCCAGGACATCTCAGCCCAGGTTCTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000411503.5
CDS CCA 72 bp GGCCGACCGGCAGCCACAGCGCCTTCGGTGGCGCCCTaGAGCAGACGTCCCCTCCCTGTGCACCTCCCCTCC +
Preference number: 6 (lower is better)
Translates to: GRPAATAPSVAP*SRRPLPVHLPS
Trigger: GGAGGGGAGGTGCACAGGGAGGGGACGTCTGCTCCAGGGCGCCACCGAAGGCGCTGTGGCTGCCGGTCGGCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS CCA 72 bp CTGTTCCAGGCCGACCGGCAGCCACAGCGCCTTCGGTaGCGCCCTGGAGCAGACGTCCCCTCCCTGTGCACC +
Preference number: 6 (lower is better)
Translates to: LFQADRQPQRLR*RPGADVPSLCT
Trigger: GGTGCACAGGGAGGGGACGTCTGCTCCAGGGCGCCACCGAAGGCGCTGTGGCTGCCGGTCGGCCTGGAACAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS CCA 72 bp GAGGGCTGGACAGGAGAGGGTGTGGGCGCAGGCCTCTaGGCGAGCGTGCCAGGCTCCGACTGCGGCCGCTTT +
Preference number: 6 (lower is better)
Translates to: EGWTGEGVGAGL*ASVPGSDCGRF
Trigger: AAAGCGGCCGCAGTCGGAGCCTGGCACGCTCGCCCAGAGGCCTGCGCCCACACCCTCTCCTGTCCAGCCCTC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000487046.1
CDS GCA 72 bp GTTGCCTGCCCCACCGGGGCGGGCTGTGGGATGGGCTaGTGTGAGCGAGGCATGGAGCAGGCCTTGCATGCA +
Preference number: 6 (lower is better)
Translates to: VACPTGAGCGMG*CERGMEQALHA
Trigger: TGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCCACAGCCCGCCCCGGTGGGGCAGGCAAC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS CCA 72 bp GAAAACATGCTCAGGGCCTTCTCCATGGGCGGGTCCTaGGCCGGGAGAGCACGGGAGGCCGAGGAGGAGGTG +
Preference number: 6 (lower is better)
Translates to: ENMLRAFSMGGS*AGRAREAEEEV
Trigger: CACCTCCTCCTCGGCCTCCCGTGCTCTCCCGGCCCAGGACCCGCCCATGGAGAAGGCCCTGAGCATGTTTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS CCA 72 bp GGGCGGGCTGTGGGATGGGCTGCTGTGAGCGAGGCATaGAGCAGGCCTTGCATGCAGATCCGGGGGTTCTGG +
Preference number: 6 (lower is better)
Translates to: GRAVGWAAVSEA*SRPCMQIRGFW
Trigger: CCAGAACCCCCGGATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCCACAGCCCGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS GCA 72 bp GGTCTGCTGGACGTGTTCTGTATGCGGGTGACGCCGTaGCCGGATAGTGAGGCTGCCGTCCTCCCGCAGAGC +
Preference number: 6 (lower is better)
Translates to: GLLDVFCMRVTP*PDSEAAVLPQS
Trigger: GCTCTGCGGGAGGACGGCAGCCTCACTATCCGGGCACGGCGTCACCCGCATACAGAACACGTCCAGCAGACC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS CAA 90 bp GCGGGCTGTGGGATGGGCTGCTGTGAGCGAGGCATGGAGCAGGCCTaGCATGCAGATCCGGGGGTTCTGGCTCCTTCTCTTGGGGCAAGG +
Preference number: 6 (lower is better)
Translates to: AGCGMGCCERGMEQA*HADPGVLAPSLGAR
Trigger: CCTTGCCCCAAGAGAAGGAGCCAGAACCCCCGGATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCCACAGCCCGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS TCA 72 bp GACGTCGGGTCCACGTCCTCCGGCAGCTGGCACTTGTaGGCGAAGGTGTTCATGACAGTGCCGTCAGCCGCC +
Preference number: 6 (lower is better)
Translates to: DVGSTSSGSWHL*AKVFMTVPSAA
Trigger: GGCGGCTGACGGCACTGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCCGGAGGACGTGGACCCGACGTC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS TCA 72 bp GTCCGGAAGGTCTGCTGGACGTGTTCTGTATGCGGGTaGCGCCGTGCCCGGATAGTGAGGCTGCCGTCCTCC +
Preference number: 6 (lower is better)
Translates to: VRKVCWTCSVCG*RRARIVRLPSS
Trigger: GGAGGACGGCAGCCTCACTATCCGGGCACGGCGTCACCCGCATACAGAACACGTCCAGCAGACCTTCCGGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS CCA 72 bp AAACTTCTCTCCGCTCGGAAGGTGGAAGAGGTTCTGTaGCTCATCCACGGACGGCGCCGGGCCCTGCCCAGG +
Preference number: 6 (lower is better)
Translates to: KLLSARKVEEVL*LIHGRRRALPR
Trigger: CCTGGGCAGGGCCCGGCGCCGTCCGTGGATGAGCCACAGAACCTCTTCCACCTTCCGAGCGGAGAGAAGTTT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS TCA 72 bp CCTCCGGCAGCTGGCACTTGTGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCAGCTTCTCAGCCCGCA +
Preference number: 6 (lower is better)
Translates to: PPAAGTCERRCS*QCRQPPASQPA
Trigger: TGCGGGCTGAGAAGCTGGCGGCTGACGGCACTGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCCGGAGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000442459.2
ENST00000487046.1
CDS GCA 72 bp GGATGGGCTGCTGTGAGCGAGGCATGGAGCAGGCCTTaGATGCAGATCCGGGGGTTCTGGCTCCTTCTCTTG +
Preference number: 6 (lower is better)
Translates to: GWAAVSEAWSRP*MQIRGFWLLLL
Trigger: CAAGAGAAGGAGCCAGAACCCCCGGATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS CAA 72 bp GGGATGGGCTGCTGTGAGCGAGGCATGGAGCAGGCCTaGCATGCAGATCCGGGGGTTCTGGCTCCTTCTCTT +
Preference number: 6 (lower is better)
Translates to: GMGCCERGMEQA*HADPGVLAPSL
Trigger: AAGAGAAGGAGCCAGAACCCCCGGATCTGCATGCAAGGCCTGCTCCATGCCTCGCTCACAGCAGCCCATCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS TCA 72 bp CCTCCGGCAGCTGGCACTTGTGAGCGAAGGTGTTCATaGCAGTGCCGTCAGCCGCCAGCTCGATGTGGTTGT +
Preference number: 6 (lower is better)
Translates to: PPAAGTCERRCS*QCRQPPARCGC
Trigger: ACAACCACATCGAGCTGGCGGCTGACGGCACTGTCATGAACACCTTCGCTCACAAGTGCCAGCTGCCGGAGG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000411503.5
ENST00000463576.5
CDS GCA 72 bp GCCCTCTGCTCTGCCCAGGTTGCAGTTAAGGGCCTCTaGTGTCCTCTCCAAATCCGTCCCTTCCGTCCCAGA +
Preference number: 6 (lower is better)
Translates to: ALCSAQVAVKGL*CPLQIRPFRPR
Trigger: TCTGGGACGGAAGGGACGGATTTGGAGAGGACAGCAGAGGCCCTTAACTGCAACCTGGGCAGAGCAGAGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000375718.4
CDS CCA 72 bp CATCCAGCCCTCCAGGGCTCCAGCTGGGATTGGCTGTaGTTACAGAGCATGGGTGGCCATGGAACCATGTCC +
Preference number: 6 (lower is better)
Translates to: HPALQGSSWDWL*LQSMGGHGTMS
Trigger: GGACATGGTTCCATGGCCACCCATGCTCTGTAACCACAGCCAATCCCAGCTGGAGCCCTGGAGGGCTGGATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000442459.2
CDS CCA 72 bp AGGAAGAGGAATGGAAACTTCTCTCCGCTCGGAAGGTaGAAGAGGTTCTGTGGCTCATCCACGGACGGCGCC +
Preference number: 6 (lower is better)
Translates to: RKRNGNFSPLGR*KRFCGSSTDGA
Trigger: GGCGCCGTCCGTGGATGAGCCACAGAACCTCTTCCACCTTCCGAGCGGAGAGAAGTTTCCATTCCTCTTCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS CCA 72 bp CCGTCAGCCGCCAGCTTCTCAGCCCGCACCTCGATGTaGTTGTTGGAGGTGGTGACAATGATGTCTTCAGGT +
Preference number: 6 (lower is better)
Translates to: PSAASFSARTSM*LLEVVTMMSSG
Trigger: ACCTGAAGACATCATTGTCACCACCTCCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCGGCTGACGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000442459.2
ENST00000487046.1
CDS CAA 90 bp ACAGTGCCGTCAGCCGCCAGCTTCTCAGCCCGCACCTCGATGTGGTaGTTGGAGGTGGTGACAATGATGTCTTCAGGTGAGAAGTCTCTC +
Preference number: 6 (lower is better)
Translates to: TVPSAASFSARTSMW*LEVVTMMSSGEKSL
Trigger: GAGAGACTTCTCACCTGAAGACATCATTGTCACCACCTCCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCGGCTGACGGCACTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000442459.2
ENST00000487046.1
CDS TCA 72 bp GGGACAGGGAAAGGGAAGGGAGAGGCACTCAGATTTTaGTCTCCGTCCGGAAGGTCTGCTGGACGTGTTCTG +
Preference number: 6 (lower is better)
Translates to: GTGKGKGEALRF*SPSGRSAGRVL
Trigger: CAGAACACGTCCAGCAGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCTCCCTTCCCTTTCCCTGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS CAA 72 bp TCAGCCGCCAGCTTCTCAGCCCGCACCTCGATGTGGTaGTTGGAGGTGGTGACAATGATGTCTTCAGGTGAG +
Preference number: 6 (lower is better)
Translates to: SAASFSARTSMW*LEVVTMMSSGE
Trigger: CTCACCTGAAGACATCATTGTCACCACCTCCAACAACCACATCGAGGTGCGGGCTGAGAAGCTGGCGGCTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000442459.2
ENST00000487046.1
CDS CAA 72 bp GGGGACAGGGAAAGGGAAGGGAGAGGCACTCAGATTTaGATCTCCGTCCGGAAGGTCTGCTGGACGTGTTCT +
Preference number: 6 (lower is better)
Translates to: GDREREGRGTQI*ISVRKVCWTCS
Trigger: AGAACACGTCCAGCAGACCTTCCGGACGGAGATCAAAATCTGAGTGCCTCTCCCTTCCCTTTCCCTGTCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1
CDS CCA 72 bp GAGGAGGTGGAAGAGGAGGAGGAAGAGGAAGAGGAATaGAAACTTCTCTCCGCTCGGAAGGTGGAAGAGGTT +
Preference number: 6 (lower is better)
Translates to: EEVEEEEEEEEE*KLLSARKVEEV
Trigger: AACCTCTTCCACCTTCCGAGCGGAGAGAAGTTTCCATTCCTCTTCCTCTTCCTCCTCCTCTTCCACCTCCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000311890.14
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000487046.1
CDS TCA 72 bp GTGGTTGTTGGAGGTGGTGACAATGATGTCTTCAGGTaGGAAGTCTCTCACGTCCACCGCAAACTCATAGGC +
Preference number: 6 (lower is better)
Translates to: VVVGGGDNDVFR*EVSHVHRKLIG
Trigger: GCCTATGAGTTTGCGGTGGACGTGAGAGACTTCTCACCTGAAGACATCATTGTCACCACCTCCAACAACCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENST00000311890.14
ENST00000375718.4
ENST00000406363.2
ENST00000411503.5
ENST00000442459.2
ENST00000463576.5
ENST00000487046.1