Pregenerated sensors for HSPB3 (Homo sapiens)
Ensembl gene IDs: ENSG00000169271Ensembl transcript IDs: ENST00000302005.3
Found 52 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | ATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATCACTTCCCCATGTCATCTaGACAGGAACCGATACGATG | + |
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Preference number: 2 (lower is better) Translates to: ISNVGNTNILVVPVAEPSLPHVI*TGTDTM Trigger: CATCGTATCGGTTCCTGTTCAGATGACATGGGGAAG...TGATGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | GTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACTCCACTGGAGGAGACTaGGCTGCCCTGGTTTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: VPVAEPSSSPCHLNRNRYSTGGD*AALVFL Trigger: GAGGAAAACCAGGGCAGCGCAGTCTCCTCCAGTGGA...GTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | GTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACTCCTCAGGTCCACGATaGTTGGCCCAGGCAGTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VPVAEPSSSPCHLNRNRYSSGPR*LAQAVH Trigger: ATGCACTGCCTGGGCCAACCATCGTGGACCTGAGGA...GTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | GTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACGAGACTGCGCTGCCCTaGTTTTCCTCAGGTCCACGA | + |
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Preference number: 4 (lower is better) Translates to: VPVAEPSSSPCHLNRNRYETALP*FSSGPR Trigger: TCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTC...GTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | GTAGTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATCTTCAGGGAGGAACTaGACCACGTCCAGCAGGATC | + |
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Preference number: 4 (lower is better) Translates to: VVPVAEPSSSPCHLNRNRSSGRN*TTSSRI Trigger: GATCCTGCTGGACGTGGTCCAGTTCCTCCCTGAAGA...TCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | GTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACAGGCAAAAACAGCCTTaGACAGCCTCCTTCTGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VPVAEPSSSPCHLNRNRYRQKQP*TASFCQ Trigger: TTGGCAGAAGGAGGCTGTTCAAGGCTGTTTTTGCCT...GTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | CCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACGATCAGCCTTCGAAGGTCTaGATGATGATGTCTTCAGGG | + |
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Preference number: 4 (lower is better) Translates to: PVAEPSSSPCHLNRNRYDQPSKV*MMMSSG Trigger: CCCTGAAGACATCATCATTCAGACCTTCGAAGGCTG...ATCGTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATGGCGTCTCTGCCGCTaGGTCCACTGGAGGAGACTG | + |
|
Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPWRLCR*VHWRRL Trigger: CAGTCTCCTCCAGTGGACTCAGCGGCAGAGACGCCA...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | GTAGTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGAAGTGCATATAAAGCATaGTCCAGCCTGCAGTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VVPVAEPSSSPCHLNRNRSAYKA*SSLQSS Trigger: AGAAGACTGCAGGCTGGATCATGCTTTATATGCACT...TCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCAACTGCCTTCAGTCAGTaGCGAGCCCCTGCAGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPTAFSQ*RAPAVA Trigger: GGCAACTGCAGGGGCTCGCCACTGACTGAAGGCAGT...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | GTAGTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATCACTTAGTCCCAACTaGATCCTTTACTTCCACCAC | + |
|
Preference number: 4 (lower is better) Translates to: VVPVAEPSSSPCHLNRNRSLSPN*ILYFHH Trigger: GTGGTGGAAGTAAAGGATCCAGTTGGGACTAAGTGA...TCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTACTAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | GTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACCTGCAGACAAATCTTTaGTTTCCACACCATCTGGTA | + |
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Preference number: 4 (lower is better) Translates to: VPVAEPSSSPCHLNRNRYLQTNL*FPHHLV Trigger: TACCAGATGGTGTGGAAATCAAAGATTTGTCTGCAG...GTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | CCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACGATACCAAAATTCCATCATaGCAGAGGACTGCAGACAAA | + |
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Preference number: 4 (lower is better) Translates to: PVAEPSSSPCHLNRNRYDTKIPS*QRTADK Trigger: TTTGTCTGCAGTCCTCTGTCATGATGGAATTTTGGT...ATCGTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | ATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATCACTGCCAACCTTCCACTaGCTTCAGTCAGTGGCGAGC | + |
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Preference number: 4 (lower is better) Translates to: ISNVGNTNILVVPVAEPSLPTFH*LQSVAS Trigger: GCTCGCCACTGACTGAAGGCAGTGGAAGGTTGGCAG...TGATGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATGGAGGAGACTGCGCTaGCCTGGTTTTCCTCAGGTC | + |
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Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPWRRLR*PGFPQV Trigger: GACCTGAGGAAAACCAGGGCAGCGCAGTCTCCTCCA...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | ATTCTCGTAGTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGCTTGAGATAAAACCGTaGTCATCCATTCTGGTTCCG | + |
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Preference number: 4 (lower is better) Translates to: ILVVPVAEPSSSPCHLNRLEIKP*SSILVP Trigger: CGGAACCAGAATGGATGAGCACGGTTTTATCTCAAG...CCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTACTACGAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCACGTAGTACCAGTGGCTaGACCATCATCTTCCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPRSTSG*TIIFPM Trigger: CATGGGGAAGATGATGGTTCAGCCACTGGTACTACG...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | TCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATCATCTAAGCATGATCCAGCCTaGAGTCTTCTAGACCTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SNVGNTNILVVPVAEPSSKHDPA*SLLDLE Trigger: CTCGAGGTCTAGAAGACTGCAGGCTGGATCATGCTT...AGATGATGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | ATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATCATCTGAAAGTGGGATTTaGCTTCTCGGGGTGGCGTCT | + |
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Preference number: 4 (lower is better) Translates to: ISNVGNTNILVVPVAEPSSESGI*LLGVAS Trigger: AGACGCCACCCCGAGAAGGCAAATCCCACTTTCAGA...TGATGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | TCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATCATCTTCTGGTTCCGTGTTGTaGTTTTATCAGCAGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: SNVGNTNILVVPVAEPSSSGSVL*FYQQPA Trigger: GGCTGGCTGCTGATAAAAGCACAACACGGAACCAGA...AGATGATGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | CCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACGATATCATGACAGAGGACTaGAGACAAATCTTTGATTTC | + |
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Preference number: 4 (lower is better) Translates to: PVAEPSSSPCHLNRNRYDIMTED*RQIFDF Trigger: GAAATCAAAGATTTGTCTGCAGTCCTCTGTCATGAT...ATCGTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | CAAATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAAACGTCCAGCAGGATCTaGAAGTGGGATTTGCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: QIISNVGNTNILVVPVAETSSRI*KWDLPS Trigger: AGAAGGCAAATCCCACTTTCAGATCCTGCTGGACGT...TTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGATTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCATTCCTGGTAACGCACTaGAATCTCTATGAGGTGCCT | + |
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Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPFLVTH*NLYEVP Trigger: AGGCACCTCATAGAGATTCCAGTGCGTTACCAGGAA...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR TCA 90 bp | CAAATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAATCGGGTGAAGCTTCTTaGGATAAAACCGTGCTCATC | + |
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Preference number: 4 (lower is better) Translates to: QIISNVGNTNILVVPVAESGEAS*DKTVLI Trigger: GATGAGCACGGTTTTATCTCAAGAAGCTTCACCCGA...TTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCACGTGCTCATCCATTCTaGTTCCGTGTTGTGCTTTTA | + |
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Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPRAHPF*FRVVLL Trigger: TAAAAGCACAACACGGAACCAGAATGGATGAGCACG...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR GCA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCAGGAATCTCTATGAGGTaGCTCAAAATGATTTTTGCC | + |
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Preference number: 4 (lower is better) Translates to: IISNVGNTNILVVPVAEPGISMR*LKMIFA Trigger: GGCAAAAATCATTTTGAGGCACCTCATAGAGATTCC...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 90 bp | CCTTCTCGGGGTGGCGTCTCTGCCGCTGAGTCCACTGGAGGAGACTaGGCTGCCCTGGTTTTCCTCAGGTCCACGATGGTTGGCCCAGGC | + |
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Preference number: 5 (lower is better) Translates to: PSRGGVSAAESTGGD*AALVFLRSTMVGPG Trigger: GCCTGGGCCAACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTCCTCCAGTGGACTCAGCGGCAGAGACGCCACCCCGAGAAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 90 bp | CAGGGAGGAACTGGACCACGTCCAGCAGGATCTGAAAGTGGGATTTaGCTTCTCGGGGTGGCGTCTCTGCCGCTGAGTCCACTGGAGGAG | + |
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Preference number: 5 (lower is better) Translates to: QGGTGPRPAGSESGI*LLGVASLPLSPLEE Trigger: CTCCTCCAGTGGACTCAGCGGCAGAGACGCCACCCCGAGAAGGCAAATCCCACTTTCAGATCCTGCTGGACGTGGTCCAGTTCCTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS CCA 90 bp | GTGGCGTCTCTGCCGCTGAGTCCACTGGAGGAGACTGCGCTGCCCTaGTTTTCCTCAGGTCCACGATGGTTGGCCCAGGCAGTGCATATA | + |
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Preference number: 5 (lower is better) Translates to: VASLPLSPLEETALP*FSSGPRWLAQAVHI Trigger: TATATGCACTGCCTGGGCCAACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTCCTCCAGTGGACTCAGCGGCAGAGACGCCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 90 bp | ATGATGATGTCTTCAGGGAGGAACTGGACCACGTCCAGCAGGATCTaGAAGTGGGATTTGCCTTCTCGGGGTGGCGTCTCTGCCGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: MMMSSGRNWTTSSRI*KWDLPSRGGVSAAE Trigger: CTCAGCGGCAGAGACGCCACCCCGAGAAGGCAAATCCCACTTTCAGATCCTGCTGGACGTGGTCCAGTTCCTCCCTGAAGACATCATCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 90 bp | CTGGTTCCGTGTTGTGCTTTTATCAGCAGCCAGCCTTCGAAGGTCTaGATGATGATGTCTTCAGGGAGGAACTGGACCACGTCCAGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LVPCCAFISSQPSKV*MMMSSGRNWTTSSR Trigger: CCTGCTGGACGTGGTCCAGTTCCTCCCTGAAGACATCATCATTCAGACCTTCGAAGGCTGGCTGCTGATAAAAGCACAACACGGAACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 90 bp | TTCCTCAGGTCCACGATGGTTGGCCCAGGCAGTGCATATAAAGCATaGTCCAGCCTGCAGTCTTCTAGACCTCGAGCTTCAAACTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: FLRSTMVGPGSAYKA*SSLQSSRPRASNSS Trigger: GGAAGAGTTTGAAGCTCGAGGTCTAGAAGACTGCAGGCTGGATCATGCTTTATATGCACTGCCTGGGCCAACCATCGTGGACCTGAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 90 bp | CCACGATGGTTGGCCCAGGCAGTGCATATAAAGCATGATCCAGCCTaGAGTCTTCTAGACCTCGAGCTTCAAACTCTTCCTGGTAACGCA | + |
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Preference number: 5 (lower is better) Translates to: PRWLAQAVHIKHDPA*SLLDLELQTLPGNA Trigger: TGCGTTACCAGGAAGAGTTTGAAGCTCGAGGTCTAGAAGACTGCAGGCTGGATCATGCTTTATATGCACTGCCTGGGCCAACCATCGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CAA 90 bp | GTACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTGAACAGGAACCGATACTCAGGTCCACGATGGTaGGCCCAGGCAGTGCATATA | + |
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Preference number: 5 (lower is better) Translates to: VPVAEPSSSPCHLNRNRYSGPRW*AQAVHI Trigger: TATATGCACTGCCTGGGCCAACCATCGTGGACCTGA...GTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CAA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCAAAGGCAAAAACAGCCTaGAACAGCCTCCTTCTGCCA | + |
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Preference number: 5 (lower is better) Translates to: IISNVGNTNILVVPVAEPKAKTA*NSLLLP Trigger: TGGCAGAAGGAGGCTGTTCAAGGCTGTTTTTGCCTT...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CAA 90 bp | CAAATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACATTCTGGTTCCGTGTaGTGCTTTTATCAGCAGCCA | + |
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Preference number: 5 (lower is better) Translates to: QIISNVGNTNILVVPVAEHSGSV*CFYQQP Trigger: TGGCTGCTGATAAAAGCACAACACGGAACCAGAATG...TTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CAA 90 bp | CAAATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAAACACCATCTGGTAGTTaGTACTGTCGGGTGAAGCTT | + |
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Preference number: 5 (lower is better) Translates to: QIISNVGNTNILVVPVAETPSGS*YCRVKL Trigger: AAGCTTCACCCGACAGTACAAACTACCAGATGGTGT...TTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGATTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS-3UTR CAA 90 bp | ATCATTTCAAATGTGGGTAATACAAACATTCTCGTAGTACCAGTGGCTGAACCAACTGCAGACAAATCTTaGATTTCCACACCATCTGGT | + |
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Preference number: 5 (lower is better) Translates to: IISNVGNTNILVVPVAEPTADKS*ISTPSG Trigger: ACCAGATGGTGTGGAAATCAAAGATTTGTCTGCAGT...TGGTTCAGCCACTGGTACTACGAGAATGTTTGTATTACCCACATTTGAAATGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS CCA 72 bp | CTGCCGCTGAGTCCACTGGAGGAGACTGCGCTGCCCTaGTTTTCCTCAGGTCCACGATGGTTGGCCCAGGCA | + |
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Preference number: 6 (lower is better) Translates to: LPLSPLEETALP*FSSGPRWLAQA Trigger: TGCCTGGGCCAACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTCCTCCAGTGGACTCAGCGGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 72 bp | GTGGGATTTGCCTTCTCGGGGTGGCGTCTCTGCCGCTaGGTCCACTGGAGGAGACTGCGCTGCCCTGGTTTT | + |
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Preference number: 6 (lower is better) Translates to: VGFAFSGWRLCR*VHWRRLRCPGF Trigger: AAAACCAGGGCAGCGCAGTCTCCTCCAGTGGACTCAGCGGCAGAGACGCCACCCCGAGAAGGCAAATCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 72 bp | GGTGGCGTCTCTGCCGCTGAGTCCACTGGAGGAGACTaGGCTGCCCTGGTTTTCCTCAGGTCCACGATGGTT | + |
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Preference number: 6 (lower is better) Translates to: GGVSAAESTGGD*AALVFLRSTMV Trigger: AACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTCCTCCAGTGGACTCAGCGGCAGAGACGCCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS CAA 90 bp | CTGGAGGAGACTGCGCTGCCCTGGTTTTCCTCAGGTCCACGATGGTaGGCCCAGGCAGTGCATATAAAGCATGATCCAGCCTGCAGTCTT | + |
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Preference number: 6 (lower is better) Translates to: LEETALPWFSSGPRW*AQAVHIKHDPACSL Trigger: AAGACTGCAGGCTGGATCATGCTTTATATGCACTGCCTGGGCCAACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTCCTCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 72 bp | TCTTCAGGGAGGAACTGGACCACGTCCAGCAGGATCTaGAAGTGGGATTTGCCTTCTCGGGGTGGCGTCTCT | + |
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Preference number: 6 (lower is better) Translates to: SSGRNWTTSSRI*KWDLPSRGGVS Trigger: AGAGACGCCACCCCGAGAAGGCAAATCCCACTTTCAGATCCTGCTGGACGTGGTCCAGTTCCTCCCTGAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS CAA 72 bp | ACTGCGCTGCCCTGGTTTTCCTCAGGTCCACGATGGTaGGCCCAGGCAGTGCATATAAAGCATGATCCAGCC | + |
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Preference number: 6 (lower is better) Translates to: TALPWFSSGPRW*AQAVHIKHDPA Trigger: GGCTGGATCATGCTTTATATGCACTGCCTGGGCCAACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS CCA 72 bp | GAGACTGCGCTGCCCTGGTTTTCCTCAGGTCCACGATaGTTGGCCCAGGCAGTGCATATAAAGCATGATCCA | + |
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Preference number: 6 (lower is better) Translates to: ETALPWFSSGPR*LAQAVHIKHDP Trigger: TGGATCATGCTTTATATGCACTGCCTGGGCCAACCATCGTGGACCTGAGGAAAACCAGGGCAGCGCAGTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 72 bp | TCCACGATGGTTGGCCCAGGCAGTGCATATAAAGCATaGTCCAGCCTGCAGTCTTCTAGACCTCGAGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: STMVGPGSAYKA*SSLQSSRPRAS Trigger: TGAAGCTCGAGGTCTAGAAGACTGCAGGCTGGATCATGCTTTATATGCACTGCCTGGGCCAACCATCGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 72 bp | TGTTGTGCTTTTATCAGCAGCCAGCCTTCGAAGGTCTaGATGATGATGTCTTCAGGGAGGAACTGGACCACG | + |
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Preference number: 6 (lower is better) Translates to: CCAFISSQPSKV*MMMSSGRNWTT Trigger: CGTGGTCCAGTTCCTCCCTGAAGACATCATCATTCAGACCTTCGAAGGCTGGCTGCTGATAAAAGCACAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 72 bp | TTGGCCCAGGCAGTGCATATAAAGCATGATCCAGCCTaGAGTCTTCTAGACCTCGAGCTTCAAACTCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LAQAVHIKHDPA*SLLDLELQTLP Trigger: AGGAAGAGTTTGAAGCTCGAGGTCTAGAAGACTGCAGGCTGGATCATGCTTTATATGCACTGCCTGGGCCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS TCA 72 bp | TACCAGTGGCTGAACCATCATCTTCCCCATGTCATCTaGACAGGAACCGATACGATGTCACTTAGTCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: YQWLNHHLPHVI*TGTDTMSLSPN Trigger: GTTGGGACTAAGTGACATCGTATCGGTTCCTGTTCAGATGACATGGGGAAGATGATGGTTCAGCCACTGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 72 bp | GATAAAACCGTGCTCATCCATTCTGGTTCCGTGTTGTaGTTTTATCAGCAGCCAGCCTTCGAAGGTCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: DKTVLIHSGSVL*FYQQPAFEGLN Trigger: ATTCAGACCTTCGAAGGCTGGCTGCTGATAAAAGCACAACACGGAACCAGAATGGATGAGCACGGTTTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS GCA 72 bp | TTGTACTGTCGGGTGAAGCTTCTTGAGATAAAACCGTaGTCATCCATTCTGGTTCCGTGTTGTGCTTTTATC | + |
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Preference number: 6 (lower is better) Translates to: LYCRVKLLEIKP*SSILVPCCAFI Trigger: GATAAAAGCACAACACGGAACCAGAATGGATGAGCACGGTTTTATCTCAAGAAGCTTCACCCGACAGTACAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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| CDS CAA 72 bp | GCAGACAAATCTTTGATTTCCACACCATCTGGTAGTTaGTACTGTCGGGTGAAGCTTCTTGAGATAAAACCG | + |
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Preference number: 6 (lower is better) Translates to: ADKSLISTPSGS*YCRVKLLEIKP Trigger: CGGTTTTATCTCAAGAAGCTTCACCCGACAGTACAAACTACCAGATGGTGTGGAAATCAAAGATTTGTCTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000302005.3 |
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