Pregenerated sensors for HSPB11 (Homo sapiens)
Ensembl gene IDs: ENSG00000081870Ensembl transcript IDs: ENST00000194214.10, ENST00000371376.1, ENST00000371377.3, ENST00000371378.6, ENST00000489675.1
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGTGCTTTGGAAGGGTTTCGAATTTGCAGTTTGAGAGAGGCCAACTaGGCTCAAGGCATTTACCTCATAATCCCCATCCTTTCACCCCAG | + |
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Preference number: 1 (lower is better) Translates to: CALEGFRICSLREAN*AQGIYLIIPILSPQ Trigger: CTGGGGTGAAAGGATGGGGATTATGAGGTAAATGCCTTGAGCTCAGTTGGCCTCTCTCAAACTGCAAATTCGAAACCCTTCCAAAGCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| 3UTR-3UTR TCA 90 bp | AATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCAAATTGAGAGAGGCCAACTaGGCTCAAGGCATTTACCTC | + |
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Preference number: 2 (lower is better) Translates to: NSVLASWSLMFLIGPFAKLREAN*AQGIYL Trigger: GAGGTAAATGCCTTGAGCTCAGTTGGCCTCTCTCAA...TTTGGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| 3UTR-3UTR TCA 90 bp | TCATGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTTTCGAATTTGCAGTTTaGGAGAGGCCAACTGAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SWNSVLASWSLMFLIGPFFEFAV*ERPTEL Trigger: GAGCTCAGTTGGCCTCTCTCAAACTGCAAATTCGAA...AAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGA 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| 3UTR-3UTR GCA 90 bp | TCATGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGAAGGGTTTCGAATTTaGAGTTTGAGAGAGGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SWNSVLASWSLMFLIGPFEGFRI*SLREAN Trigger: GTTGGCCTCTCTCAAACTGCAAATTCGAAACCCTTC...AAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| 3UTR CAA 90 bp | GTAAATTGCATGGAAATTATTATGTGCTTTGGAAGGGTTTCGAATTaGCAGTTTGAGAGAGGCCAACTGAGCTCAAGGCATTTACCTCAT | + |
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Preference number: 2 (lower is better) Translates to: VNCMEIIMCFGRVSN*QFERGQLSSRHLPH Trigger: ATGAGGTAAATGCCTTGAGCTCAGTTGGCCTCTCTCAAACTGCAAATTCGAAACCCTTCCAAAGCACATAATAATTTCCATGCAATTTAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| 3UTR-3UTR TCA 90 bp | TCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGTTCAGTCCAAATTCATCATTATaGATGACTACTCACCTTCAC | + |
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Preference number: 2 (lower is better) Translates to: SSVTRKYLKACDLAVMFSPNSSL*MTTHLH Trigger: GTGAAGGTGAGTAGTCATTCATAATGATGAATTTGG...ACTGAACATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| 3UTR CCA 72 bp | AGAATAAAGATGTCATGGAATAGTGTTCTAGCAAGCTaGAGTCTTATGTTCCTAATAGGGCCTTTTGCCAAA | + |
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Preference number: 3 (lower is better) Translates to: RIKMSWNSVLAS*SLMFLIGPFAK Trigger: TTTGGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGACATCTTTATTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR TCA 90 bp | CAGTTTGAGAGAGGCCAACTGAGCTCAAGGCATTTACCTCATAATCCCCATCCTTTCGAATTTGCAGTTTaGGAGAGGCCAACTGAGCTC | + |
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Preference number: 4 (lower is better) Translates to: QFERGQLSSRHLPHNPHPFEFAV*ERPTEL Trigger: GAGCTCAGTTGGCCTCTCTCAAACTGCAAATTCGAA...AGGATGGGGATTATGAGGTAAATGCCTTGAGCTCAGTTGGCCTCTCTCAAACTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR TCA 90 bp | CTTCTCAAAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGGGTGGGCAGATCACCTaGGGTCTGGAGTTCGAGACC | + |
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Preference number: 4 (lower is better) Translates to: LLKNLKWFQCYKKIPESLGGQIT*GLEFET Trigger: GGTCTCGAACTCCAGACCTCAGGTGATCTGCCCACC...CAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTTTGAGAAG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CCA 90 bp | TGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCGGGGAAACATTCCTGTaGTGGTCCAAAACGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: WNSVLASWSLMFLIGPFAGETFL*WSKTFL Trigger: CAGAAACGTTTTGGACCACCACAGGAATGTTTCCCC...GGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR TCA 90 bp | AAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAAGACGGAGGTTGCAGTaGGCCAAGATAGCGCCATCC | + |
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Preference number: 4 (lower is better) Translates to: KTLNGSSVTRKYLKACDLRRRLQ*AKIAPS Trigger: GGATGGCGCTATCTTGGCTCACTGCAACCTCCGTCT...TAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR TCA 90 bp | TCATGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTTTGAGAGAGGCCAACTaGGCTCAAGGCATTTACCTC | + |
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Preference number: 4 (lower is better) Translates to: SWNSVLASWSLMFLIGPFLREAN*AQGIYL Trigger: GAGGTAAATGCCTTGAGCTCAGTTGGCCTCTCTCAA...AAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGA 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR GCA 90 bp | TGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCGAAGGGTTTCGAATTTaGAGTTTGAGAGAGGCCAAC | + |
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Preference number: 4 (lower is better) Translates to: WNSVLASWSLMFLIGPFAEGFRI*SLREAN Trigger: GTTGGCCTCTCTCAAACTGCAAATTCGAAACCCTTC...GGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR TCA 90 bp | TGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCCTGGATTCCCATCAATaGTATTTTCAGGTGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: WNSVLASWSLMFLIGPFALDSHQ*YFQVGV Trigger: AACACCCACCTGAAAATATCATTGATGGGAATCCAG...GGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR GCA 90 bp | TCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGTTCAGTTCTCCATTTAAAATTTaGTTTTCCGGGCCGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: SSVTRKYLKACDLAVMFSSPFKI*FSGPGA Trigger: TGCGCCCGGCCCGGAAAAGCAAATTTTAAATGGAGA...ACTGAACATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR TCA 90 bp | GGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGTTCCTGGATTCCCATCAATaGTATTTTCAGGTGGGTGTT | + |
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Preference number: 4 (lower is better) Translates to: GSSVTRKYLKACDLAVMFLDSHQ*YFQVGV Trigger: AACACCCACCTGAAAATATCATTGATGGGAATCCAG...GAACATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CCA 90 bp | TGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCGGTCCAAAACGTTTCTaGATTCCCATCAATGATATT | + |
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Preference number: 4 (lower is better) Translates to: WNSVLASWSLMFLIGPFAGPKRF*IPINDI Trigger: AATATCATTGATGGGAATCCAGAAACGTTTTGGACC...GGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR CCA 90 bp | TCATGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGAAACATTCCTGTGGTaGTCCAAAACGTTTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SWNSVLASWSLMFLIGPFETFLW*SKTFLD Trigger: ATCCAGAAACGTTTTGGACCACCACAGGAATGTTTC...AAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR CCA 90 bp | TCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGTTCAGTTCTGGTATACCAAGGTaGCTTTTGAAATGCCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: SSVTRKYLKACDLAVMFSSGIPR*LLKCLS Trigger: GGAAAGGCATTTCAAAAGCCACCTTGGTATACCAGA...ACTGAACATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR TCA 90 bp | TCATGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTATCCCCCTAAATTCCTaGGAAAATGCCACTAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: SWNSVLASWSLMFLIGPFIPLNS*ENATSN Trigger: ATTACTAGTGGCATTTTCTCAGGAATTTAGGGGGAT...AAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR CCA 90 bp | TGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCAGAATAAAGATGTCATaGAATAGTGTTCTAGCAAGC | + |
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Preference number: 4 (lower is better) Translates to: WNSVLASWSLMFLIGPFARIKMS*NSVLAS Trigger: GCTTGCTAGAACACTATTCCATGACATCTTTATTCT...GGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR TCA 90 bp | CTTCTCAAAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTACCAAGGTGGCTTTTaGAATGCCTTTCCTACTCTT | + |
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Preference number: 4 (lower is better) Translates to: LLKNLKWFQCYKKIPESLYQGGF*NAFPTL Trigger: AAGAGTAGGAAAGGCATTTCAAAAGCCACCTTGGTA...CAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTTTGAGAAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR TCA 90 bp | AATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGCCAAATTCATCATTATaGATGACTACTCACCTTCAC | + |
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Preference number: 4 (lower is better) Translates to: NGSSVTRKYLKACDLAVMPNSSL*MTTHLH Trigger: GTGAAGGTGAGTAGTCATTCATAATGATGAATTTGG...CATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR TCA 90 bp | AAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAATACCTGAAAGCCTGTaGTCTAGCCGTAATGTTCAG | + |
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Preference number: 4 (lower is better) Translates to: KTLNGSSVTRKYLKACDLIPESL*SSRNVQ Trigger: CTGAACATTACGGCTAGATCACAGGCTTTCAGGTAT...TAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CCA 90 bp | TCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGTTCAGTGGTCCAAAACGTTTCTaGATTCCCATCAATGATATT | + |
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Preference number: 4 (lower is better) Translates to: SSVTRKYLKACDLAVMFSGPKRF*IPINDI Trigger: AATATCATTGATGGGAATCCAGAAACGTTTTGGACC...ACTGAACATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CCA 90 bp | AATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTAATAGGGCCTTTTGCCAAAAGTGTTCTAGCAAGCTaGAGTCTTATGTTCCTAATA | + |
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Preference number: 4 (lower is better) Translates to: NSVLASWSLMFLIGPFAKSVLAS*SLMFLI Trigger: TATTAGGAACATAAGACTCCAGCTTGCTAGAACACT...TTTGGCAAAAGGCCCTATTAGGAACATAAGACTCCAGCTTGCTAGAACACTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR TCA 90 bp | AAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAACAATTTCTTCATTTTaGAGCTGCCCCTCTGTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KTLNGSSVTRKYLKACDLTISSF*SCPSVC Trigger: ACACACAGAGGGGCAGCTTCAAAATGAAGAAATTGT...TAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CCA 90 bp | TCAAAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATGAAACATTCCTGTGGTaGTCCAAAACGTTTCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: SKTLNGSSVTRKYLKACDETFLW*SKTFLD Trigger: ATCCAGAAACGTTTTGGACCACCACAGGAATGTTTC...ATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR GCA 90 bp | AGAATAAAGATGTCATGGAATAGTGTTCTAGCAAGCTGGAGTCTTATGTTCCTACCTAATAGGGCCTTTTaGCAAAGACTTTTACATAGT | + |
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Preference number: 4 (lower is better) Translates to: RIKMSWNSVLASWSLMFLPNRAF*QRLLHS Trigger: ACTATGTAAAAGTCTTTGGCAAAAGGCCCTATTAGG...TAGGAACATAAGACTCCAGCTTGCTAGAACACTATTCCATGACATCTTTATTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371376.1 |
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| CDS-3UTR CCA 90 bp | AAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTATTGCTCAAAATCAACTaGCTCTTTAGACGTGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: KTLNGSSVTRKYLKACDLLLKIN*LFRRAF Trigger: AAAAGCACGTCTAAAGAGCCAGTTGATTTTGAGCAA...TAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CCA 90 bp | AAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTATTCACATCTCTTATCTaGTATACCAAGGTGGCTTTT | + |
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Preference number: 4 (lower is better) Translates to: KTLNGSSVTRKYLKACDLFTSLI*YTKVAF Trigger: AAAAGCCACCTTGGTATACCAGATAAGAGATGTGAA...TAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS GCA 90 bp | TGTTTTTGTCCCTATATTTCTTTTTCCCTCTGCCTGAGATTATCATaGACAGTGGAACTACACAGAGCACTGGGATCAGAAACAACATGG | + |
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Preference number: 5 (lower is better) Translates to: CFCPYISFSLCLRLS*TVELHRALGSETTW Trigger: CCATGTTGTTTCTGATCCCAGTGCTCTGTGTAGTTCCACTGTGCATGATAATCTCAGGCAGAGGGAAAAAGAAATATAGGGACAAAAACA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489675.1 |
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| CDS CCA 90 bp | AGCCTTTCAATCCTTACATGTTTGTGGAAACAAATAATGAATTCCTaGGGAAACATTCCTGTGGTGGTCCAAAACGTTTCTGGATTCCCA | + |
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Preference number: 5 (lower is better) Translates to: SLSILTCLWKQIMNS*GNIPVVVQNVSGFP Trigger: TGGGAATCCAGAAACGTTTTGGACCACCACAGGAATGTTTCCCCAGGAATTCATTATTTGTTTCCACAAACATGTAAGGATTGAAAGGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194214.10 ENST00000371376.1 ENST00000371377.3 ENST00000371378.6 |
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| CDS-3UTR CAA 90 bp | TCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATCTAGCCGTAATGTTCAGTATCTTTTTCAATCCATaGCTCAAAATCAACTGGCTC | + |
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Preference number: 5 (lower is better) Translates to: SSVTRKYLKACDLAVMFSIFFNP*LKINWL Trigger: GAGCCAGTTGATTTTGAGCAATGGATTGAAAAAGAT...ACTGAACATTACGGCTAGATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS-3UTR CAA 90 bp | TCAAAAACCTTAAATGGTTCCAGTGTTACAAGAAAATACCTGAAAGCCTGTGATATACCAAGGTGGCTTTaGAAATGCCTTTCCTACTCT | + |
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Preference number: 5 (lower is better) Translates to: SKTLNGSSVTRKYLKACDIPRWL*KCLSYS Trigger: AGAGTAGGAAAGGCATTTCAAAAGCCACCTTGGTAT...ATCACAGGCTTTCAGGTATTTTCTTGTAACACTGGAACCATTTAAGGTTTTTGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS CAA 72 bp | CTCTGGGCGCCGGACCTTCCGGGCTCGAAACCTCCCTaGCGCCCCGCCCCACGCAGAGCGTCCCGACCCGCA | + |
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Preference number: 6 (lower is better) Translates to: LWAPDLPGSKPP*RPAPRRASRPA Trigger: TGCGGGTCGGGACGCTCTGCGTGGGGCGGGGCGCAAGGGAGGTTTCGAGCCCGGAAGGTCCGGCGCCCAGAG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000194214.10 |
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| CDS CAA 72 bp | ATAGCGCCATCCCACTCCGGCCACAATTTCTTCATTTaGAAGCTGCCCCTCTGTGTGTACCAAATCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: IAPSHSGHNFFI*KLPLCVYQIFF Trigger: GAAAAAGATTTGGTACACACAGAGGGGCAGCTTCAAAATGAAGAAATTGTGGCCGGAGTGGGATGGCGCTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000371378.6 |
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| CDS GCA 72 bp | CCCTATATTTCTTTTTCCCTCTGCCTGAGATTATCATaGACAGTGGAACTACACAGAGCACTGGGATCAGAA | + |
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Preference number: 6 (lower is better) Translates to: PYISFSLCLRLS*TVELHRALGSE Trigger: TTCTGATCCCAGTGCTCTGTGTAGTTCCACTGTGCATGATAATCTCAGGCAGAGGGAAAAAGAAATATAGGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000489675.1 |
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| CDS CAA 72 bp | AGTAGCGGAGCCATCATGTGCCACAATTTCTTCATTTaGAAGCTGCCCCTCTGTGTGTACCAAATCTTTTTC | + |
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Preference number: 6 (lower is better) Translates to: SSGAIMCHNFFI*KLPLCVYQIFF Trigger: GAAAAAGATTTGGTACACACAGAGGGGCAGCTTCAAAATGAAGAAATTGTGGCACATGATGGCTCCGCTACT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000194214.10 ENST00000489675.1 |
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| CDS TCA 72 bp | TATGTTTTTGTCCCTATATTTCTTTTTCCCTCTGCCTaGGATTATCATGCACAGTGGAACTACACAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: YVFVPIFLFPSA*DYHAQWNYTEH Trigger: GTGCTCTGTGTAGTTCCACTGTGCATGATAATCTCAGGCAGAGGGAAAAAGAAATATAGGGACAAAAACATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000489675.1 |
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| CDS CCA 72 bp | ATCCTTACATGTTTGTGGAAACAAATAATGAATTCCTaGGGAAACATTCCTGTGGTGGTCCAAAACGTTTCT | + |
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Preference number: 6 (lower is better) Translates to: ILTCLWKQIMNS*GNIPVVVQNVS Trigger: AGAAACGTTTTGGACCACCACAGGAATGTTTCCCCAGGAATTCATTATTTGTTTCCACAAACATGTAAGGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENST00000194214.10 ENST00000371376.1 ENST00000371377.3 ENST00000371378.6 |
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| CDS CAA 72 bp | TTTGTGTGTATGGCGATAATACTACTATTGGTGGTCTaGGTCATAAACATTTATGGAGAGCCTATGATGAGT | + |
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Preference number: 6 (lower is better) Translates to: FVCMAIILLLVV*VINIYGEPMMS Trigger: ACTCATCATAGGCTCTCCATAAATGTTTATGACCAAGACCACCAATAGTAGTATTATCGCCATACACACAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000489675.1 |
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