Pregenerated sensors for HSPB1 (Homo sapiens)

Ensembl gene IDs: ENSG00000106211

Ensembl transcript IDs: ENST00000429938.1, ENST00000447574.1, ENST00000675417.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	ATTCAGAGTTTTGGGAGGAACGGAGCAGGGCGCGGAGCTGGGGAGTaGGCAGTACGCAGGCGCACTTGGAGCCGCGCACACGCCCACTCA	+
Preference number: 5 (lower is better) Translates to: IQSFGRNGAGRGAGE*AVRRRTWSRAHAHS Trigger: TGAGTGGGCGTGTGCGCGGCTCCAAGTGCGCCTGCGTACTGCTCACTCCCCAGCTCCGCGCCCTGCTCCGTTCCTCCCAAAACTCTGAAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000447574.1 ENST00000675417.1
CDS CCA 90 bp	GGAAGCAGCCAGGACTGCAGGCTGGTAGGGATTAACAGAGGGGGTTaGGGATGGGGGCGTGCCCGCCGGTCTGGGCTCTCAGAAACTTCC	+
Preference number: 5 (lower is better) Translates to: GSSQDCRLVGINRGG*GWGRARRSGLSETS Trigger: GGAAGTTTCTGAGAGCCCAGACCGGCGGGCACGCCCCCATCCCCAACCCCCTCTGTTAATCCCTACCAGCCTGCAGTCCTGGCTGCTTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENST00000429938.1 ENST00000447574.1 ENST00000675417.1
CDS CCA 90 bp	TCTGGGCTCTCAGAAACTTCCGGAAAGTTCTTCGATTCAGAGTTTTaGGAGGAACGGAGCAGGGCGCGGAGCTGGGGAGTGAGCAGTACG	+
Preference number: 5 (lower is better) Translates to: SGLSETSGKFFDSEF*EERSRARSWGVSST Trigger: CGTACTGCTCACTCCCCAGCTCCGCGCCCTGCTCCGTTCCTCCCAAAACTCTGAATCGAAGAACTTTCCGGAAGTTTCTGAGAGCCCAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000447574.1 ENST00000675417.1
CDS CCA 72 bp	TGGAGCCGCGCACACGCCCACTCAGCGGCTAGAAACTaGCACCGCGCCAGGGAACTCCCCGCTTATCTGGGG	+
Preference number: 6 (lower is better) Translates to: WSRAHAHSAARN*HRARELPAYLG Trigger: CCCCAGATAAGCGGGGAGTTCCCTGGCGCGGTGCCAGTTTCTAGCCGCTGAGTGGGCGTGTGCGCGGCTCCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447574.1 ENST00000675417.1
CDS CAA 90 bp	GTCTGGGCTCTCAGAAACTTCCGGAAAGTTCTTCGATTCAGAGTTTaGGGAGGAACGGAGCAGGGCGCGGAGCTGGGGAGTGAGCAGTAC	+
Preference number: 6 (lower is better) Translates to: VWALRNFRKVLRFRV*GGTEQGAELGSEQY Trigger: GTACTGCTCACTCCCCAGCTCCGCGCCCTGCTCCGTTCCTCCCAAAACTCTGAATCGAAGAACTTTCCGGAAGTTTCTGAGAGCCCAGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447574.1 ENST00000675417.1
CDS CCA 72 bp	TCAGAAACTTCCGGAAAGTTCTTCGATTCAGAGTTTTaGGAGGAACGGAGCAGGGCGCGGAGCTGGGGAGTG	+
Preference number: 6 (lower is better) Translates to: SETSGKFFDSEF*EERSRARSWGV Trigger: CACTCCCCAGCTCCGCGCCCTGCTCCGTTCCTCCCAAAACTCTGAATCGAAGAACTTTCCGGAAGTTTCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000447574.1 ENST00000675417.1
CDS CAA 72 bp	CTCAGAAACTTCCGGAAAGTTCTTCGATTCAGAGTTTaGGGAGGAACGGAGCAGGGCGCGGAGCTGGGGAGT	+
Preference number: 6 (lower is better) Translates to: LRNFRKVLRFRV*GGTEQGAELGS Trigger: ACTCCCCAGCTCCGCGCCCTGCTCCGTTCCTCCCAAAACTCTGAATCGAAGAACTTTCCGGAAGTTTCTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000447574.1 ENST00000675417.1

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