Pregenerated sensors for HSPA8 (Homo sapiens)
Ensembl gene IDs: ENSG00000109971Ensembl transcript IDs: ENST00000453788.6, ENST00000525624.5, ENST00000526686.1, ENST00000527983.5, ENST00000530391.1, ENST00000531063.1, ENST00000532091.1, ENST00000532182.5, ENST00000532636.5, ENST00000534319.5
Found 28 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CACGGTGGGACTGGACTAAGCAGGGAACTGGGTGAAAGAAAACGCTaGCTCCACTTCCCCGCGCGCCAGGCAAACCGATGCAGCAACCCT | + |
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Preference number: 5 (lower is better) Translates to: HGGTGLSRELGERKR*LHFPARQANRCSNP Trigger: AGGGTTGCTGCATCGGTTTGCCTGGCGCGCGGGGAAGTGGAGCCAGCGTTTTCTTTCACCCAGTTCCCTGCTTAGTCCAGTCCCACCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530391.1 |
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| CDS TCA 90 bp | AGCTCTGAAGAACCACGGTGGGACTGGACTAAGCAGGGAACTGGGTaGAAGAAAACGCTGGCTCCACTTCCCCGCGCGCCAGGCAAACCG | + |
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Preference number: 5 (lower is better) Translates to: SSEEPRWDWTKQGTG*KKTLAPLPRAPGKP Trigger: CGGTTTGCCTGGCGCGCGGGGAAGTGGAGCCAGCGTTTTCTTTCACCCAGTTCCCTGCTTAGTCCAGTCCCACCGTGGTTCTTCAGAGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530391.1 |
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| CDS TCA 90 bp | TGGATCCCTCCGCGGAAAAGAAGGCGAAACCGCTTCTCTGAGCCCTaGCCGTTAGGCCCCTTCCCACCTCCGTCTAGAACAGATTCGGCT | + |
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Preference number: 5 (lower is better) Translates to: WIPPRKRRRNRFSEP*PLGPFPPPSRTDSA Trigger: AGCCGAATCTGTTCTAGACGGAGGTGGGAAGGGGCCTAACGGTCAGGGCTCAGAGAAGCGGTTTCGCCTTCTTTTCCGCGGAGGGATCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS GCA 90 bp | GGTCCCTTGGACATGGTTGCTTCGTGTTCCAGACGGGCCTCTAAGTaGCCCGGGTTTCGCGAATCTGTATTTCATAGCGTGGCTTTGGAC | + |
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Preference number: 5 (lower is better) Translates to: GPLDMVASCSRRASK*PGFRESVFHSVALD Trigger: GTCCAAAGCCACGCTATGAAATACAGATTCGCGAAACCCGGGGCACTTAGAGGCCCGTCTGGAACACGAAGCAACCATGTCCAAGGGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS GCA 90 bp | TACGAATGTTTAACAATCACTCATCACAGCGAGTCACCTTGGGCCTaGCTGCCTTTAGGGTTAATTGAGATACCATTGTTACCTGCACCA | + |
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Preference number: 5 (lower is better) Translates to: YECLTITHHSESPWA*LPLGLIEIPLLPAP Trigger: TGGTGCAGGTAACAATGGTATCTCAATTAACCCTAAAGGCAGGCAGGCCCAAGGTGACTCGCTGTGATGAGTGATTGTTAAACATTCGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527983.5 |
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| CDS CCA 90 bp | GCTCAAACATCCAAGGAAGGAACTGGCCAACATAAGACTTTCTGGTaGAAACTACGAATGGTTTTGGAATCCATCATCATAGCGAGTCAG | + |
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Preference number: 5 (lower is better) Translates to: AQTSKEGTGQHKTFW*KLRMVLESIIIASQ Trigger: CTGACTCGCTATGATGATGGATTCCAAAACCATTCGTAGTTTCCACCAGAAAGTCTTATGTTGGCCAGTTCCTTCCTTGGATGTTTGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526686.1 ENST00000532091.1 |
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| CDS CCA 90 bp | GTCGCTCAAACATCCAAGGAAGGAACTGGCCAACATAAGACTTTCTaGTGGAAACTACGAATGGTTTTGGAATCCATCATCATAGCGAGT | + |
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Preference number: 5 (lower is better) Translates to: VAQTSKEGTGQHKTF*WKLRMVLESIIIAS Trigger: ACTCGCTATGATGATGGATTCCAAAACCATTCGTAGTTTCCACCAGAAAGTCTTATGTTGGCCAGTTCCTTCCTTGGATGTTTGAGCGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526686.1 ENST00000532091.1 |
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| CDS CCA 90 bp | GGAAACTACGAATGTTTAACAATCACTCATCACAGCGAGTCACCTTaGGCCTGCCTGCCTTTAGGGTTAATTGAGATACCATTGTTACCT | + |
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Preference number: 5 (lower is better) Translates to: GNYECLTITHHSESP*ACLPLGLIEIPLLP Trigger: AGGTAACAATGGTATCTCAATTAACCCTAAAGGCAGGCAGGCCCAAGGTGACTCGCTGTGATGAGTGATTGTTAAACATTCGTAGTTTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527983.5 |
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| CDS TCA 90 bp | GCAAAGGTTCAAACTTCAACCTCCTACGTTATCCAGATTTCAGCCTaGAAGGTTTCTACAACCTGTTTTATAACAGACTTGATAACAAGT | + |
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Preference number: 5 (lower is better) Translates to: AKVQTSTSYVIQISA*KVSTTCFITDLITS Trigger: ACTTGTTATCAAGTCTGTTATAAAACAGGTTGTAGAAACCTTTCAGGCTGAAATCTGGATAACGTAGGAGGTTGAAGTTTGAACCTTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531063.1 |
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| CDS GCA 72 bp | CGCTGGCTCCACTTCCCCGCGCGCCAGGCAAACCGATaGAGCAACCCTCCCCCGCCACGCGGCCGCCGGGCG | + |
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Preference number: 6 (lower is better) Translates to: RWLHFPARQANR*SNPPPPRGRRA Trigger: CGCCCGGCGGCCGCGTGGCGGGGGAGGGTTGCTGCATCGGTTTGCCTGGCGCGCGGGGAAGTGGAGCCAGCG 78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000530391.1 |
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| CDS TCA 72 bp | GATCCCTCCGCGGAAAAGAAGGCGAAACCGCTTCTCTaGGCCCTGACCGTTAGGCCCCTTCCCACCTCCGTC | + |
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Preference number: 6 (lower is better) Translates to: DPSAEKKAKPLL*ALTVRPLPTSV Trigger: GACGGAGGTGGGAAGGGGCCTAACGGTCAGGGCTCAGAGAAGCGGTTTCGCCTTCTTTTCCGCGGAGGGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS TCA 72 bp | GAACCACGGTGGGACTGGACTAAGCAGGGAACTGGGTaGAAGAAAACGCTGGCTCCACTTCCCCGCGCGCCA | + |
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Preference number: 6 (lower is better) Translates to: EPRWDWTKQGTG*KKTLAPLPRAP Trigger: TGGCGCGCGGGGAAGTGGAGCCAGCGTTTTCTTTCACCCAGTTCCCTGCTTAGTCCAGTCCCACCGTGGTTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000530391.1 ENST00000532636.5 |
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| CDS CCA 72 bp | CGGCTTTTCAGAACCGCCTCAGGACGCGGTCGTGTCTaGATCCCTCCGCGGAAAAGAAGGCGAAACCGCTTC | + |
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Preference number: 6 (lower is better) Translates to: RLFRTASGRGRV*IPPRKRRRNRF Trigger: GAAGCGGTTTCGCCTTCTTTTCCGCGGAGGGATCCAGACACGACCGCGTCCTGAGGCGGTTCTGAAAAGCCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS TCA 72 bp | CCGCGGAAAAGAAGGCGAAACCGCTTCTCTGAGCCCTaGCCGTTAGGCCCCTTCCCACCTCCGTCTAGAACA | + |
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Preference number: 6 (lower is better) Translates to: PRKRRRNRFSEP*PLGPFPPPSRT Trigger: TGTTCTAGACGGAGGTGGGAAGGGGCCTAACGGTCAGGGCTCAGAGAAGCGGTTTCGCCTTCTTTTCCGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS CCA 72 bp | ACTGGACTAAGCAGGGAACTGGGTGAAAGAAAACGCTaGCTCCACTTCCCCGCGCGCCAGGCAAACCGATGC | + |
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Preference number: 6 (lower is better) Translates to: TGLSRELGERKR*LHFPARQANRC Trigger: GCATCGGTTTGCCTGGCGCGCGGGGAAGTGGAGCCAGCGTTTTCTTTCACCCAGTTCCCTGCTTAGTCCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000530391.1 |
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| CDS GCA 72 bp | GGTCCCTTGGACATGGTTGATTTCCGTCCTGCCGGCTaGAACCAAATACCGCTGCCATCCCACCGAAAACTG | + |
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Preference number: 6 (lower is better) Translates to: GPLDMVDFRPAG*NQIPLPSHRKL Trigger: CAGTTTTCGGTGGGATGGCAGCGGTATTTGGTTGCAGCCGGCAGGACGGAAATCAACCATGTCCAAGGGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000532182.5 |
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| CDS CCA 72 bp | CCCTTCCCACCTCCGTCTAGAACAGATTCGGCTTCTTaGCTCAGTCCTTCCCCAACTAGCCCAAGCCCTACA | + |
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Preference number: 6 (lower is better) Translates to: PFPPPSRTDSAS*LSPSPTSPSPT Trigger: TGTAGGGCTTGGGCTAGTTGGGGAAGGACTGAGCCAAGAAGCCGAATCTGTTCTAGACGGAGGTGGGAAGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS GCA 72 bp | GGCGAGTTCAATGAGACCGGTTTCCGCCCGCCACCCTaGCTCTTATACCCTATCTTAGAACCTTCCAGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GEFNETGFRPPP*LLYPILEPSRR Trigger: CCTTCTGGAAGGTTCTAAGATAGGGTATAAGAGGCAGGGTGGCGGGCGGAAACCGGTCTCATTGAACTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000453788.6 ENST00000527983.5 |
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| CDS GCA 72 bp | GACATGGTTGCTTCGTGTTCCAGACGGGCCTCTAAGTaGCCCGGGTTTCGCGAATCTGTATTTCATAGCGTG | + |
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Preference number: 6 (lower is better) Translates to: DMVASCSRRASK*PGFRESVFHSV Trigger: CACGCTATGAAATACAGATTCGCGAAACCCGGGGCACTTAGAGGCCCGTCTGGAACACGAAGCAACCATGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525624.5 |
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| CDS TCA 72 bp | CGAGTCACCTTGGGCCTGCCTGCCTTTAGGGTTAATTaGGATACCATTGTTACCTGCACCATAAGCAACAGC | + |
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Preference number: 6 (lower is better) Translates to: RVTLGLPAFRVN*DTIVTCTISNS Trigger: GCTGTTGCTTATGGTGCAGGTAACAATGGTATCTCAATTAACCCTAAAGGCAGGCAGGCCCAAGGTGACTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527983.5 |
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| CDS CCA 72 bp | GAATGTTTAACAATCACTCATCACAGCGAGTCACCTTaGGCCTGCCTGCCTTTAGGGTTAATTGAGATACCA | + |
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Preference number: 6 (lower is better) Translates to: ECLTITHHSESP*ACLPLGLIEIP Trigger: TGGTATCTCAATTAACCCTAAAGGCAGGCAGGCCCAAGGTGACTCGCTGTGATGAGTGATTGTTAAACATTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000527983.5 |
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| CDS CAA 90 bp | GGAACTGGCCAACATAAGACTTTCTGGTGGAAACTACGAATGGTTTaGGAATCCATCATCATAGCGAGTCAGTCAAGACTTCCCTTTATC | + |
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Preference number: 6 (lower is better) Translates to: GTGQHKTFWWKLRMV*ESIIIASQSRLPFI Trigger: GATAAAGGGAAGTCTTGACTGACTCGCTATGATGATGGATTCCAAAACCATTCGTAGTTTCCACCAGAAAGTCTTATGTTGGCCAGTTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000526686.1 ENST00000532091.1 |
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| CDS CCA 72 bp | ACATCCAAGGAAGGAACTGGCCAACATAAGACTTTCTaGTGGAAACTACGAATGGTTTTGGAATCCATCATC | + |
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Preference number: 6 (lower is better) Translates to: TSKEGTGQHKTF*WKLRMVLESII Trigger: GATGATGGATTCCAAAACCATTCGTAGTTTCCACCAGAAAGTCTTATGTTGGCCAGTTCCTTCCTTGGATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526686.1 ENST00000532091.1 |
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| CDS CCA 72 bp | TCCAAGGAAGGAACTGGCCAACATAAGACTTTCTGGTaGAAACTACGAATGGTTTTGGAATCCATCATCATA | + |
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Preference number: 6 (lower is better) Translates to: SKEGTGQHKTFW*KLRMVLESIII Trigger: TATGATGATGGATTCCAAAACCATTCGTAGTTTCCACCAGAAAGTCTTATGTTGGCCAGTTCCTTCCTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000526686.1 ENST00000532091.1 |
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| CDS TCA 72 bp | CAAACTTCAACCTCCTACGTTATCCAGATTTCAGCCTaGAAGGTTTCTACAACCTGTTTTATAACAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: QTSTSYVIQISA*KVSTTCFITDL Trigger: CAAGTCTGTTATAAAACAGGTTGTAGAAACCTTTCAGGCTGAAATCTGGATAACGTAGGAGGTTGAAGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000531063.1 |
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| CDS CCA 72 bp | AACTATTATACTTACATATATGCAAACTCCAGCAAATaGATTAATGCTGGTGAAAGAACAGCTGGAGCACCC | + |
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Preference number: 6 (lower is better) Translates to: NYYTYIYANSSK*INAGERTAGAP Trigger: GGGTGCTCCAGCTGTTCTTTCACCAGCATTAATCCATTTGCTGGAGTTTGCATATATGTAAGTATAATAGTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000532091.1 ENST00000534319.5 |
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| CDS GCA 72 bp | TCAAAAAGTTCCCTCCTCACGTTTCATAAACTTTTGTaGTTCCTAGCCCTGTTATATTTGTTCTGTCATTTA | + |
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Preference number: 6 (lower is better) Translates to: SKSSLLTFHKLL*FLALLYLFCHL Trigger: TAAATGACAGAACAAATATAACAGGGCTAGGAAGCACAAAAGTTTATGAAACGTGAGGAGGGAACTTTTTGA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000531063.1 |
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| CDS CAA 72 bp | AAATCAAAAAGTTCCCTCCTCACGTTTCATAAACTTTaGTGCTTCCTAGCCCTGTTATATTTGTTCTGTCAT | + |
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Preference number: 6 (lower is better) Translates to: KSKSSLLTFHKL*CFLALLYLFCH Trigger: ATGACAGAACAAATATAACAGGGCTAGGAAGCACAAAAGTTTATGAAACGTGAGGAGGGAACTTTTTGATTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000531063.1 |
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