RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSPA4L (Homo sapiens)

Ensembl gene IDs: ENSG00000164070

Ensembl transcript IDs: ENST00000296464.9, ENST00000505726.1, ENST00000508549.5, ENST00000508776.5, ENST00000515262.1

Found 323 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp ATTAAGGACATAAGGGCTCATATACTTGTCTATGCTTCTGTCTCTTaGAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGT +
Preference number: 1 (lower is better)
Translates to: IKDIRAHILVYASVS*RLKHHFSLFPYLSS
Trigger: ACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAAGAGACAGAAGCATAGACAAGTATATGAGCCCTTATGTCCTTAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR GCA 90 bp AAGAGGATAATATCAGAATTAAGCTTTATAAGCATATCCCTCTCATaGCACATGAAAAGTCATCAAGGGCTATTTAACCAGTGTTACCAG +
Preference number: 1 (lower is better)
Translates to: KRIISELSFISISLS*HMKSHQGLFNQCYQ
Trigger: CTGGTAACACTGGTTAAATAGCCCTTGATGACTTTTCATGTGGCATGAGAGGGATATGCTTATAAAGCTTAATTCTGATATTATCCTCTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR CAA 90 bp CCTGTAGTCCCAGCTACTCAGGAGAGGTTGAGGCAGAAAAATCGCTaGAACTCAGGTGGTGGAGGCTGCAGTGAGCCTAGATCACCCCAT +
Preference number: 2 (lower is better)
Translates to: PVVPATQERLRQKNR*NSGGGGCSEPRSPH
Trigger: ATGGGGTGATCTAGGCTCACTGCAGCCTCCACCACCTGAGTTCAAGCGATTTTTCTGCCTCAACCTCTCCTGAGTAGCTGGGACTACAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR CAA 90 bp GACATAAGGGCTCATATACTTGTCTATGCTTCTGTCTCTTGCAGGTaGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGG +
Preference number: 2 (lower is better)
Translates to: DIRAHILVYASVSCR*KHHFSLFPYLSSFR
Trigger: CCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAAGAGACAGAAGCATAGACAAGTATATGAGCCCTTATGTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR-3UTR TCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATAGTGGTTAAGAACAACTaGGCGTCTGTTGTGTGTACC +
Preference number: 2 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLIVVKNN*ASVVCT
Trigger: GGTACACACAACAGACGCTCAGTTGTTCTTAACCAC...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR-3UTR TCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTATGCCTTTTATGTGTTTaGGACAGGGCCTCACTCTGT +
Preference number: 2 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLCLLCV*DRASLC
Trigger: ACAGAGTGAGGCCCTGTCTCAAACACATAAAAGGCA...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR-3UTR CCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTACATTGCAATCCAGCCTaGGTAACAAAGCCATACTCT +
Preference number: 2 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLHCNPA*VTKPYS
Trigger: AGAGTATGGCTTTGTTACCCAGGCTGGATTGCAATG...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR-3UTR CCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTAAGCTTTGGATTTCTGTaGTACATCAATGAGATGGAC +
Preference number: 2 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLSFGFL*YINEMD
Trigger: GTCCATCTCATTGATGTACCACAGAAATCCAAAGCT...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR-3UTR CAA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTAGCTACTCAGGAGAGGTaGAGGCAGAAAAATCGCTTG +
Preference number: 3 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLATQER*RQKNRL
Trigger: CAAGCGATTTTTCTGCCTCAACCTCTCCTGAGTAGC...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR TCA 72 bp TGCAAAATGCACTACTCCATACTCTCCATTAAGTGCTaGCTACATTGTAGAAACAAAATCTCTCGTAGAGAA +
Preference number: 3 (lower is better)
Translates to: CKMHYSILSIKC*LHCRNKISRRE
Trigger: TTCTCTACGAGAGATTTTGTTTCTACAATGTAGTCAGCACTTAATGGAGAGTATGGAGTAGTGCATTTTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR-3UTR CAA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTATCCGGAAAGCTTAGATaGTCTTGTAAATCTAATTCG +
Preference number: 3 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLSGKLR*SCKSNS
Trigger: CGAATTAGATTTACAAGACAATCTAAGCTTTCCGGA...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
3UTR CCA 72 bp TACTTAATAGGCAATACTCACAAAATTGACCTCTTTTaGTCCGGAATTAAAGTATTCCAAGGCCAGAATACA +
Preference number: 3 (lower is better)
Translates to: YLIGNTHKIDLF*SGIKVFQGQNT
Trigger: TGTATTCTGGCCTTGGAATACTTTAATTCCGGACCAAAAGAGGTCAATTTTGTGAGTATTGCCTATTAAGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGGCGGTCGGGCTAGGTaGGAGGCAGGCGACCGGCCG +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFGGRAR*EAGDRP
Trigger: CGGCCGGTCGCCTGCCTCTCACCTAGCCCGACCGCC...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR TCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTAGACATCCCGCCGCGTaGTGGTCGGGCTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGRHPAA*WSGCWY
Trigger: GTACCAGCAGCCCGACCATCACGCGGCGGGATGTCT...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCGTCAGCGCCGCAGCCTaGACCGCGTCCCGCAGCCTG +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPVSAAA*TASRSL
Trigger: CAGGCTGCGGGACGCGGTGCAGGCTGCGGCGCTGAC...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCGGATGCTGTCCTGGCTaGCGGGCGCCGCCCCCTCAC +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPGCCPG*RAPPPH
Trigger: GTGAGGGGGCGGCGCCCGCCAGCCAGGACAGCATCC...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR TCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACAGCGATTCTCCTGCCTaGGCCTCCCGGGTAGCTGAG +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHSDSPA*ASRVAE
Trigger: CTCAGCTACCCGGGAGGCTCAGGCAGGAGAATCGCT...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCCTGCCTCAGCCTCCTaGGTAGCTGGGACTACCGGC +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLPASAS*VAGTTG
Trigger: GCCGGTAGTCCCAGCTACTCAGGAGGCTGAGGCAGG...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGCGCCCCCTCACCCCCTaGCCTCAGAAGGGCTCGCCC +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMRPLTP*PQKGSP
Trigger: GGGCGAGCCCTTCTGAGGGCAGGGGGTGAGGGGGCG...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR GCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGCCGGCCCGGGGCTTTaGGAACGTGTTTTGAGGCAC +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHAGPGL*ERVLRH
Trigger: GTGCCTCAAAACACGTTCGCAAAGCCCCGGGCCGGC...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACAGCCTCCTGAGTAGCTaGGACTACCGGCGCCCGCCA +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYSLLSS*DYRRPP
Trigger: TGGCGGGCGCCGGTAGTCCCAGCTACTCAGGAGGCT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTCGGGCTGCTGGTACTaGACCCTTCGGTACGGGAAC +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHSGCWY*TLRYGN
Trigger: GTTCCCGTACCGAAGGGTTCAGTACCAGCAGCCCGA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACCCTGACCTCGTGATCTaGCCGCCTTGGCCTCCCAAA +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHPDLVI*PPWPPK
Trigger: TTTGGGAGGCCAAGGCGGGCAGATCACGAGGTCAGG...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTGCGACTCATTGGCTTaGTCGCCCTCGCTCGGCAGT +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGCDSLA*SPSLGS
Trigger: ACTGCCGAGCGAGGGCGAGCAAGCCAATGAGTCGCA...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR TCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTCGGGCTGCTGGTACTaGACCCTTCGGTACGGGAAC +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLSGCWY*TLRYGN
Trigger: GTTCCCGTACCGAAGGGTTCAGTACCAGCAGCCCGA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTCTGGTCTTGAACTCCTaGGCTCAGGCGATCCACCTG +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGLVLNS*AQAIHL
Trigger: CAGGTGGATCGCCTGAGCTCAGGAGTTCAAGACCAG...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGGCCTGCAACCTGGGCTaGAGCCATCACAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARACNLG*SHHRSS
Trigger: AGAAGATCTGTGATGGCTGCAGCCCAGGTTGCAGGC...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCGATCTCGGCTCACTaGAACCTCCGCCTCCTGGGT +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFAISAH*NLRLLG
Trigger: ACCCAGGAGGCGGAGGTTGCAGTGAGCCGAGATCGC...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCCCAGGCTGGAGTaGAGGAGCACGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYLPRLE*RSTISA
Trigger: AGCTGAGATCGTGCTCCTGCACTCCAGCCTGGGCAA...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTTGCCCAGGCTGGAGTaGAGTGGCGCGATCTCGGCT +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNLPRLE*SGAISA
Trigger: AGCCGAGATCGCGCCACTGCACTCCAGCCTGGGCAA...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAAGCTGGGATTACAGGTaGACGTCACCATGGCCCCGC +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFESWDYR*TSPWPR
Trigger: GCGGGGCCATGGTGACGTGCACCTGTAATCCCAGCT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTGGCAACCGGAGGCGTaGTTGTCACGGCGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNWQPEA*LSRRQD
Trigger: ATCCTGCCGCCGTGACAAGCACGCCTCCGGTTGCCA...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR TCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGAAGACATCCCGCCGCGTaGTGGTCGGGCTGCTGGTAC +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGRHPAA*WSGCWY
Trigger: GTACCAGCAGCCCGACCATCACGCGGCGGGATGTCT...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAGCTAACGGCAGCCTCTaGCTCCTGGGTTCCAGCGAT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELANGSL*LLGSSD
Trigger: ATCGCTGGAACCCAGGAGGCAGAGGCTGCCGTTAGC...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCTGTTACCCCCAGGTTaGAGTGCAGTGGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLLLPPG*SAVAGS
Trigger: AGATCCTGCCACTGCACTCCAACCTGGGGGTAACAG...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAGGGATTGCGACTCATTaGCTTGCTCGCCCTCGCTCG +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELGIATH*LARPRS
Trigger: CGAGCGAGGGCGAGCAAGCCAATGAGTCGCAATCCC...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR GCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGTGGCGATGGTCTCGATaGCGCCACTTCTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMWRWSR*RHFSRQ
Trigger: CTGTCGCGAGAAGTGGCGGCATCGAGACCATCGCCA...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAAGTGAGCAGAGATTGTaGCCTCCAGCCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFESEQRL*PPAWVT
Trigger: TGTCACCCAGGCTGGAGGGCACAATCTCTGCTCACT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATACCCCCAGGTTGGAGTaGAGTGGCAGGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNTPRLE*SGRISA
Trigger: AGCTGAGATCCTGCCACTGCACTCCAACCTGGGGGT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTTTAAGCCTGCAACCTaGGCTGCAGCCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHFKPAT*AAAITD
Trigger: ATCTGTGATGGCTGCAGCCCAGGTTGCAGGCTTAAA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTTTCTGTTGCCCAGGCTaGAGTGCAGGAGCACGATCT +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFFCCPG*SAGARS
Trigger: AGATCGTGCTCCTGCACTCCAGCCTGGGCAACAGAA...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTGCTTCTCAATTACTaGTGCGCTAGCCACACTGAA +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLLLNY*CASHTE
Trigger: TTCAGTGTGGCTAGCGCATCAGTAATTGAGAAGCAA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCTCCCAGGAAGTTTCTaGGGCATAGCTCCTAACCAA +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLLPGSF*GIAPNQ
Trigger: TTGGTTAGGAGCTATGCCTCAGAAACTTCCTGGGAG...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATGAATTGCTTGAGGCTTaGGCCCAGGAGGTGGAGGTT +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNELLEA*AQEVEV
Trigger: AACCTCCACCTCCTGGGCTCAAGCCTCAAGCAATTC...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTATTGCTGCTGGGATTaGGACTCCTACCAGAAGCAA +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHYCCWD*DSYQKQ
Trigger: TTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGATGGCGATGGTCTCGATaGCGCCACTTCTCGCGACAG +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGWRWSR*RHFSRQ
Trigger: CTGTCGCGAGAAGTGGCGGCATCGAGACCATCGCCA...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTATCTGGCTCTTTGCTaGATTTCCAATGGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARYLALC*ISNGSS
Trigger: ACTCGAGCCATTGGAAATGCAGCAAAGAGCCAGATA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTCCTCTTCTGGGCTATTaGTGCTGGGATTGCGACTCA +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFPLLGY*CWDCDS
Trigger: TGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGG...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTTTAAGCCTGCAACCTaGGCTGCAGCCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLFKPAT*AAAITD
Trigger: ATCTGTGATGGCTGCAGCCCAGGTTGCAGGCTTAAA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAGGTGGTTCAACCCTaGCCAAAAGGGAAGCACACA +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLKVVQP*PKGKHT
Trigger: TGTGTGCTTCCCTTTTGGCCAGGGTTGAACCACCTT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTGTTCATAGGGAAGCCTaGTCCTTTCAGTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGVHREA*SFQFAQ
Trigger: TTGTGCAAACTGAAAGGATCAGGCTTCCCTATGAAC...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGTGGTTAAGAACAACTaGGCGTCTGTTGTGTGTACC +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLVVKNN*ASVVCT
Trigger: GGTACACACAACAGACGCTCAGTTGTTCTTAACCAC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTAGCTTTGTTTCTTTaGCTGGAGAGCTCCAAGTCA +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLALFL*LESSKS
Trigger: TGACTTGGAGCTCTCCAGTCAAAGAAACAAAGCTAA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCTTCTGGGCTATTGCTaGTGGGATTGCGACTCCTAC +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPLLGYC*WDCDSY
Trigger: GTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAG...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCCCTCTTCTGGGCTATTaGTGCTGGGATTGCGACTCC +
Preference number: 4 (lower is better)
Translates to: LQVETPFQSVPILKQFQVPLLGY*CWDCDS
Trigger: GGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGG...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCGAAAGCCGAGGTCAATaGCAACCACAGACATCCCGC +
Preference number: 4 (lower is better)
Translates to: LQVETPFQSVPILKQFQVESRGQ*QPQTSR
Trigger: GCGGGATGTCTGTGGTTGGCATTGACCTCGGCTTTC...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGGACTATCTGGCTCTTTaGTGCATTTCCAATGGCTCG +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLDYLAL*CISNGS
Trigger: CGAGCCATTGGAAATGCAGCAAAGAGCCAGATAGTC...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGGCCTGCAACCTGGGCTaGAGCCATCACAGATCTTCT +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMACNLG*SHHRSS
Trigger: AGAAGATCTGTGATGGCTGCAGCCCAGGTTGCAGGC...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGAAGCTCCCAATTCTTaGATCAGGATAAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHEAPNS*IRIRHF
Trigger: GAAGTGCCTTATCCTGATGCAAGAATTGGGAGCTTC...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGGTCTTCAGGAACTTCTaGTTTTGGTTTGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARVFRNF*FWFGLV
Trigger: TACAAGCCCAAACCAAAAGCAGAAGTTCCTGAAGAC...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCACAGGCGTGAGCCACTaGACGGGGCCTCTAATTACA +
Preference number: 4 (lower is better)
Translates to: LQVETPFQSVPILKQFQVTGVSH*TGPLIT
Trigger: TGTAATTAGAGGCCCCGTGCAGTGGCTCACGCCTGT...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTAAGGTGGTTCAACCCTaGCCAAAAGGGAAGCACACA +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFKVVQP*PKGKHT
Trigger: TGTGTGCTTCCCTTTTGGCCAGGGTTGAACCACCTT...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGGAGAATGGGGCAGGATaGTTCTTACAGAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARENGAG*FLQKTS
Trigger: TGAAGTTTTCTGTAAGAACCATCCTGCCCCATTCTC...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGCTGTTGAGAAGATCTTaGCCTAGTTGTCTACATAGG +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLLRRS*PSCLHR
Trigger: CCTATGTAGACAACTAGGCCAAGATCTTCTCAACAG...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAAGTTCAAGACCAGGCTaGCCAACATGGCAAAACTCC +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFESSRPG*PTWQNS
Trigger: GGAGTTTTGCCATGTTGGCCAGCCTGGTCTTGAACT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGTAATCTCAGCACTCTaGCAGGTGGATGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRVISAL*QVDVGG
Trigger: TCCACCCACATCCACCTGCCAGAGTGCTGAGATTAC...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTCAGCAATGTAGCAGTTaGGAAAGCCGAGGTCAATGC +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRQQCSS*ESRGQC
Trigger: GCATTGACCTCGGCTTTCTCAACTGCTACATTGCTG...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGCTTCAAAGCATTTTCTaGAGTCTCTTTAAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLQSIF*SLFKLG
Trigger: GCCAAGCTTAAAGAGACTTCAGAAAATGCTTTGAAG...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGATTGGAGCATCACTGTaGTCGCCTTCCAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLIGASL*SPSKFC
Trigger: GCAAAATTTGGAAGGCGATCACAGTGATGCTCCAAT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGTTTTGGCTCCTGTATaGTCAATTTCCTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHVLAPV*SISSSG
Trigger: TCCAGAAGAGGAAATTGATCATACAGGAGCCAAAAC...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTACCACAGGATCTTaGGTGAGACTTAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARFTTGS*VRLSLF
Trigger: GAACAAACTAAGTCTCACTCAAGATCCTGTGGTAAA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAGTGGTTAAGAACAACTaGGCGTCTGTTGTGTGTACC +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEVVKNN*ASVVCT
Trigger: GGTACACACAACAGACGCTCAGTTGTTCTTAACCAC...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGATCCACCTCAGCCTCCTaGGTAGCTAGGACTACAGGT +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGSTSAS*VARTTG
Trigger: ACCTGTAGTCCTAGCTACTCAGGAGGCTGAGGTGGA...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAGACTATCTGGCTCTTTaGTGCATTTCCAATGGCTCG +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEDYLAL*CISNGS
Trigger: CGAGCCATTGGAAATGCAGCAAAGAGCCAGATAGTC...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCCGCACCTTAACTCCTaGACTTCCATTAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLPHLNS*TSIRHF
Trigger: AAAATGCCTAATGGAAGTGCAGGAGTTAAGGTGCGG...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGAGTAACTTGCTCAATTaGAAAAGGTCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARSNLLN*KRSLFL
Trigger: GAGGAAGAGAGACCTTTTGCAATTGAGCAAGTTACT...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGAAGCTCCCAATTCTTaGATCAGGATAAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLEAPNS*IRIRHF
Trigger: GAAGTGCCTTATCCTGATGCAAGAATTGGGAGCTTC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACGAAGCTCCCAATTCTTaGATCAGGATAAGGCACTTC +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYEAPNS*IRIRHF
Trigger: GAAGTGCCTTATCCTGATGCAAGAATTGGGAGCTTC...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTGTCTTCAGGAACTTCTaGTTTTGGTTTGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGVFRNF*FWFGLV
Trigger: TACAAGCCCAAACCAAAAGCAGAAGTTCCTGAAGAC...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAAGGTGTGAGTCACTGTaGCCAGCCTTGTTATCCTTT +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFERCESL*PALLSF
Trigger: AAAGGATAACAAGGCTGGGCACAGTGACTCACACCT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCTTCTGGGCTATTGCTaGTGGGATTGCGACTCATTG +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPLLGYC*WDCDSL
Trigger: CAATGAGTCGCAATCCCAGCAGCAATAGCCCAGAAG...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGACGTTCGTGACTATCTaGCTCTTTGCTGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLTFVTI*LFAAFP
Trigger: TGGAAATGCAGCAAAGAGCCAGATAGTCACGAACGT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTCACACAGTCAGCCACTaGTTTCTTCAAAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGHTVSH*FLQSIF
Trigger: GAAAATGCTTTGAAGAAACCAGTGGCTGACTGTGTG...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATAAGGTGGTTCAACCCTaGCCAAAAGGGAAGCACACA +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNKVVQP*PKGKHT
Trigger: TGTGTGCTTCCCTTTTGGCCAGGGTTGAACCACCTT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTATTTCTTACGTTCGTaGCTATCTGGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYYFLRS*LSGSLL
Trigger: CAGCAAAGAGCCAGATAGTCACGAACGTAAGAAATA...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTATTTCTTACGTTCGTaGCTATCTGGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLYFLRS*LSGSLL
Trigger: CAGCAAAGAGCCAGATAGTCACGAACGTAAGAAATA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACCTTCAAAGCATTTTCTaGAGTCTCTTTAAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHLQSIF*SLFKLG
Trigger: GCCAAGCTTAAAGAGACTTCAGAAAATGCTTTGAAG...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTAGTTTTTCACATTCCTaGTATAAACGCAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGSFSHS*YKRNKA
Trigger: GGCCTTGTTGCGTTTATATCAGGAATGTGAAAAACT...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTCTTCCACCTTAATGTaGTTGAATAGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGSSTLM*LNREQG
Trigger: ACCTTGTTCCCTATTCAATCACATTAAGGTGGAAGA...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTGTGGAAAAACATTCTaGATAGTGAAGCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARCGKTF*IVKLPI
Trigger: AATTGGGAGCTTCACTATTCAGAATGTTTTTCCACA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGTTTTGGCTCCTGTATaGTCAATTTCCTCTTCTGGA +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLVLAPV*SISSSG
Trigger: TCCAGAAGAGGAAATTGATCATACAGGAGCCAAAAC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGCTAACTTATCTTGCATaGTCATCTTCCCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLTYLA*SSSPHF
Trigger: AAAATGAGGGGAAGATGATCATGCAAGATAAGTTAG...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTTGCCTTTTATGTGTTTaGGACAGGGCCTCACTCTGT +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRCLLCV*DRASLC
Trigger: ACAGAGTGAGGCCCTGTCTCAAACACATAAAAGGCA...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTTTGCGAACGTGTTTTaGGGCACATTTTTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLFANVF*GTFLGC
Trigger: ACAACCCAAAAATGTGCCTCAAAACACGTTCGCAAA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR GCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATATCTGGCTCTTTGCTaGATTTCCAATGGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEYLALC*ISNGSS
Trigger: ACTCGAGCCATTGGAAATGCAGCAAAGAGCCAGATA...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACCGCACCTTAACTCCTaGACTTCCATTAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEPHLNS*TSIRHF
Trigger: AAAATGCCTAATGGAAGTGCAGGAGTTAAGGTGCGG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACAGTAACTTGCTCAATTaGAAAAGGTCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHSNLLN*KRSLFL
Trigger: GAGGAAGAGAGACCTTTTGCAATTGAGCAAGTTACT...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTGCAGGAATTCGTGTTaGTCCTCCTACAATTTCTAT +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHCRNSC*SSYNFY
Trigger: ATAGAAATTGTAGGAGGAGCAACACGAATTCCTGCA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGGTCTTCAGGAACTTCTaGTTTTGGTTTGGGCTTGTA +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLVFRNF*FWFGLV
Trigger: TACAAGCCCAAACCAAAAGCAGAAGTTCCTGAAGAC...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTGCTGCATTTCCAATaGCTCGAGTTCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFELLHFQ*LEFLIP
Trigger: TGGGATCAAGAACTCGAGCCATTGGAAATGCAGCAA...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTTTGCTGCATTTCCAATaGCTCGAGTTCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFLLHFQ*LEFLIP
Trigger: TGGGATCAAGAACTCGAGCCATTGGAAATGCAGCAA...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTTTCAGTTTGCACAATaGGATCATCAAATGATCGCC +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHFQFAQ*DHQMIA
Trigger: GGCGATCATTTGATGATCCCATTGTGCAAACTGAAA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGAGAATGGGGCAGGATaGTTCTTACAGAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLENGAG*FLQKTS
Trigger: TGAAGTTTTCTGTAAGAACCATCCTGCCCCATTCTC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTCTACATAGGCTACTCTaGATCGGTAGATCAATACTT +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGLHRLL*IGRSIL
Trigger: AAGTATTGATCTACCGATCCAGAGTAGCCTATGTAG...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACACTCTGTCCATCCATTaGGCCATTGTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYTLSIH*AIVFTI
Trigger: AATAGTGAACACAATGGCCCAATGGATGGACAGAGT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAAAAAGATGGACCCCGTaGTTACTTGCACGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEKRWTP*LLARFE
Trigger: TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
46% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCAGGCTGGAGTGCAGTaGTATGATTATGGCTCATTG +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPQAGVQ*YDYGSL
Trigger: CAATGAGCCATAATCATACCACTGCACTCCAGCCTG...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTCTGGCAGGTGGATGTaGGTGGATCATTTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNSGRWM*VDHLKS
Trigger: TGACTTCAAATGATCCACCCACATCCACCTGCCAGA...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTATTTTTGGGTTGTTTTaGCAACCGGAGGCGTGCTTG +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRIFGLF*QPEACL
Trigger: CAAGCACGCCTCCGGTTGCCAAAACAACCCAAAAAT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR TCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTTATTTCTTACGTTCGTaGCTATCTGGCTCTTTGCTG +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFYFLRS*LSGSLL
Trigger: CAGCAAAGAGCCAGATAGTCACGAACGTAAGAAATA...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACAATGGGATCATCAAATaGTCGCCCATGAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYNGIIK*SPMKLF
Trigger: AAAAAGCTTCATGGGCGATCATTTGATGATCCCATT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCGTTCATAGGGAAGCCTaGTCCTTTCAGTTTGCACAA +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPVHREA*SFQFAQ
Trigger: TTGTGCAAACTGAAAGGATCAGGCTTCCCTATGAAC...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACAGTTTTTCACATTCCTaGTATAAACGCAACAAGGCC +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYSFSHS*YKRNKA
Trigger: GGCCTTGTTGCGTTTATATCAGGAATGTGAAAAACT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGTCTTCCACCTTAATGTaGTTGAATAGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLSSTLM*LNREQG
Trigger: ACCTTGTTCCCTATTCAATCACATTAAGGTGGAAGA...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTGTGGAAAAACATTCTaGATAGTGAAGCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHCGKTF*IVKLPI
Trigger: AATTGGGAGCTTCACTATTCAGAATGTTTTTCCACA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTTGCTTCTCAATTACTaGTGCGCTAGCCACACTGAA +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNLLLNY*CASHTE
Trigger: TTCAGTGTGGCTAGCGCATCAGTAATTGAGAAGCAA...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTATTGCTTCTCAATTACTaGTGCGCTAGCCACACTGAA +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELLLLNY*CASHTE
Trigger: TTCAGTGTGGCTAGCGCATCAGTAATTGAGAAGCAA...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATTGGAGCATCACTGTaGTCGCCTTCCAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELIGASL*SPSKFC
Trigger: GCAAAATTTGGAAGGCGATCACAGTGATGCTCCAAT...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTATTGGAGCATCACTGTaGTCGCCTTCCAAATTTTGC +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRIGASL*SPSKFC
Trigger: GCAAAATTTGGAAGGCGATCACAGTGATGCTCCAAT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTTTCAATGTAGCTGTTaGGAAGATCTTGGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLFQCSC*EDLGLV
Trigger: AACTAGGCCAAGATCTTCTCAACAGCTACATTGAAA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTCAGTAGGATCCAGATaGTCATATCTTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYSVGSR*SYLSSL
Trigger: CAAGGATGAAAGATATGATCATCTGGATCCTACTGA...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTCTCTCCATTAAGTGCTaGCTACATTGTAGAAACAAA +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGLSIKC*LHCRNK
Trigger: TTTGTTTCTACAATGTAGTCAGCACTTAATGGAGAG...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTGTGGGTGGATCATTTaGAGTCAGGAGTTCAAAACC +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNCGWII*SQEFKT
Trigger: GGTTTTGAACTCCTGACTTCAAATGATCCACCCACA...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTTATCTGGCTCTTTGCTaGATTTCCAATGGCTCGAGT +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRYLALC*ISNGSS
Trigger: ACTCGAGCCATTGGAAATGCAGCAAAGAGCCAGATA...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACAGTAACTTGCTCAATTaGAAAAGGTCTCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYSNLLN*KRSLFL
Trigger: GAGGAAGAGAGACCTTTTGCAATTGAGCAAGTTACT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACAGCATTCCAGTAACTTaGTCAATTGCAAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYSIPVT*SIAKGL
Trigger: GAGACCTTTTGCAATTGAGCAAGTTACTGGAATGCT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACAAAATCCCTGCAAAATaGACTACTCCATACTCTCCA +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYKIPAK*TTPYSP
Trigger: TGGAGAGTATGGAGTAGTGCATTTTGCAGGGATTTT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAGGTGTGCACCACCATaGCTTGCTAAGTTTTTATTT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLRCAPP*LAKFLF
Trigger: AAATAAAAACTTAGCAAGGCATGGTGGTGCACACCT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCTTCAAGCAATTCTCTTaGCTCAGCCTCCCGAATAGC +
Preference number: 4 (lower is better)
Translates to: LQVETPFQSVPILKQFQVFKQFS*LSLPNS
Trigger: GCTATTCGGGAGGCTGAGGCAAGAGAATTGCTTGAA...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGAAACCGTGTCCTCTTCTaGGCTATTGCTGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGNRVLF*AIAAGI
Trigger: AATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTT...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTATTGCTGCATTTCCAATaGCTCGAGTTCTTGATCCCA +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELLLHFQ*LEFLIP
Trigger: TGGGATCAAGAACTCGAGCCATTGGAAATGCAGCAA...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGTTTCAGTTTGCACAATaGGATCATCAAATGATCGCC +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLFQFAQ*DHQMIA
Trigger: GGCGATCATTTGATGATCCCATTGTGCAAACTGAAA...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATCCTGCCACCCAAATATaGATCAAAGGTAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNPATQI*IKGSSQ
Trigger: TTGGCTACTACCTTTGATCCATATTTGGGTGGCAGG...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGACACTGAAGATTCCATaGATGTTAACACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARTLKIP*MLTRTL
Trigger: TAAAGTTCGTGTTAACATCCATGGAATCTTCAGTGT...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACCAGCTGACTTTGTTTTaGCTCCTGTATGATCAATTT +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHQLTLF*LLYDQF
Trigger: AAATTGATCATACAGGAGCCAAAACAAAGTCAGCTG...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTACTCTGTCCATCCATTaGGCCATTGTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFTLSIH*AIVFTI
Trigger: AATAGTGAACACAATGGCCCAATGGATGGACAGAGT...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTAAAAGATGGACCCCGTaGTTACTTGCACGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRKRWTP*LLARFE
Trigger: TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAAAAAGATGGACCCCGTaGTTACTTGCACGGTTTGAA +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELKRWTP*LLARFE
Trigger: TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTT...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTACCAGATGTAAAAGATaGACCCCGTGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRTRCKR*TPWLLA
Trigger: TGCAAGTAACCACGGGGTCCATCTTTTACATCTGGT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAACCAGATGTAAAAGATaGACCCCGTGGTTACTTGCA +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELTRCKR*TPWLLA
Trigger: TGCAAGTAACCACGGGGTCCATCTTTTACATCTGGT...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTATGAAAGTGGAGGAATaGTTGTATGTATTTAGGGTG +
Preference number: 4 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGMKVEE*LYVFRV
Trigger: CACCCTAAATACATACAACCATTCCTCCACTTTCAT...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTTTTCAATGTAGCTGTTaGGAAGATCTTGGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFFQCSC*EDLGLV
Trigger: AACTAGGCCAAGATCTTCTCAACAGCTACATTGAAA...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
43% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACCTAACTTATCTTGCATaGTCATCTTCCCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYLTYLA*SSSPHF
Trigger: AAAATGAGGGGAAGATGATCATGCAAGATAAGTTAG...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTTACCACAGGATCTTaGGTGAGACTTAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEFTTGS*VRLSLF
Trigger: GAACAAACTAAGTCTCACTCAAGATCCTGTGGTAAA...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAGATTTGTTCTTTCACTaGAGGAATTCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELDLFFH*RNSCCS
Trigger: GGAGCAACACGAATTCCTGCAGTGAAAGAACAAATC...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTCCAGAGGATTTAGTATaGTGTGAGCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFPEDLV*CELSFV
Trigger: AACAAAAGACAGCTCACAGCATACTAAATCCTCTGG...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTACTGAGGCAGGAGAATTaGTTGAGGCTTGAGCCCAGG +
Preference number: 4 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLLRQEN*LRLEPR
Trigger: CCTGGGCTCAAGCCTCAAGCAATTCTCCTGCCTCAG...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGACGTTCGTGACTATCTaGCTCTTTGCTGCATTTCCA +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMTFVTI*LFAAFP
Trigger: TGGAAATGCAGCAAAGAGCCAGATAGTCACGAACGT...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTCACACAGTCAGCCACTaGTTTCTTCAAAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRHTVSH*FLQSIF
Trigger: GAAAATGCTTTGAAGAAACCAGTGGCTGACTGTGTG...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTACACACAGTCAGCCACTaGTTTCTTCAAAGCATTTTC +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELHTVSH*FLQSIF
Trigger: GAAAATGCTTTGAAGAAACCAGTGGCTGACTGTGTG...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGCCTGCCACCCAAATATaGATCAAAGGTAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMPATQI*IKGSSQ
Trigger: TTGGCTACTACCTTTGATCCATATTTGGGTGGCAGG...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACACACTGAAGATTCCATaGATGTTAACACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHTLKIP*MLTRTL
Trigger: TAAAGTTCGTGTTAACATCCATGGAATCTTCAGTGT...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCTGTTGAGAAGATCTTaGCCTAGTTGTCTACATAGG +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPLLRRS*PSCLHR
Trigger: CCTATGTAGACAACTAGGCCAAGATCTTCTCAACAG...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAGGAACTTCTGCTTTTaGTTTGGGCTTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLRNFCF*FGLVND
Trigger: ATCATTTACAAGCCCAAACCAAAAGCAGAAGTTCCT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGAGGAACTTCTGCTTTTaGTTTGGGCTTGTAAATGAT +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLRNFCF*FGLVND
Trigger: ATCATTTACAAGCCCAAACCAAAAGCAGAAGTTCCT...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATACTCTGTCCATCCATTaGGCCATTGTGTTCACTATT +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNTLSIH*AIVFTI
Trigger: AATAGTGAACACAATGGCCCAATGGATGGACAGAGT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAAATGGGATCATCAAATaGTCGCCCATGAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELNGIIK*SPMKLF
Trigger: AAAAAGCTTCATGGGCGATCATTTGATGATCCCATT...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTACTTCAAAGCATTTTCTaGAGTCTCTTTAAGCTTGGC +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELLQSIF*SLFKLG
Trigger: GCCAAGCTTAAAGAGACTTCAGAAAATGCTTTGAAG...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACACAGTTGTTCAAATTaGGCCCTGTTCATTTTACTA +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEHSCSN*ALFILL
Trigger: TAGTAAAATGAACAGGGCTCAATTTGAACAACTGTG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTCAGTAGGATCCAGATaGTCATATCTTTCATCCTTG +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNSVGSR*SYLSSL
Trigger: CAAGGATGAAAGATATGATCATCTGGATCCTACTGA...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTTTTACCACAGGATCTTaGGTGAGACTTAGTTTGTTC +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRFTTGS*VRLSLF
Trigger: GAACAAACTAAGTCTCACTCAAGATCCTGTGGTAAA...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTCTTTGCTACTATTTCTaGAACTTTTACCACAGGATC +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFLCYYF*NFYHRI
Trigger: GATCCTGTGGTAAAAGTTTCAGAAATAGTAGCAAAG...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTCTGATCCTTTCAGTTTaGACAATGGGATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFLILSV*TMGSSN
Trigger: ATTTGATGATCCCATTGTGCAAACTGAAAGGATCAG...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATAGCATTCCAGTAACTTaGTCAATTGCAAAAGGTCTC +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNSIPVT*SIAKGL
Trigger: GAGACCTTTTGCAATTGAGCAAGTTACTGGAATGCT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTTGCAGGAATTCGTGTTaGTCCTCCTACAATTTCTAT +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRCRNSC*SSYNFY
Trigger: ATAGAAATTGTAGGAGGAGCAACACGAATTCCTGCA...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTATGCAGGAATTCGTGTTaGTCCTCCTACAATTTCTAT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELCRNSC*SSYNFY
Trigger: ATAGAAATTGTAGGAGGAGCAACACGAATTCCTGCA...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGGATTTGTTCTTTCACTaGAGGAATTCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMDLFFH*RNSCCS
Trigger: GGAGCAACACGAATTCCTGCAGTGAAAGAACAAATC...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTACCAGAGGATTTAGTATaGTGTGAGCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELPEDLV*CELSFV
Trigger: AACAAAAGACAGCTCACAGCATACTAAATCCTCTGG...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGAAACAACAAGGAAGATaGACAACACACATACATAAC +
Preference number: 4 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLKQQGR*TTHIHN
Trigger: GTTATGTATGTGTGTTGTGCATCTTCCTTGTTGTTT...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATGGTTCCTTCTTGTaGAAAGTAATGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLNGSFL*KVMTFE
Trigger: CTCAAAAGTCATTACTTTCCACAAGAAGGAACCATT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACATCACCATCAGACTGTaGAAAAACATTCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYITIRL*KNILNS
Trigger: ACTATTCAGAATGTTTTTCCACAGTCTGATGGTGAT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTCACTATTAGCTTTTaGTTTGTCTTCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYFTISF*FVFRNF
Trigger: GAAGTTCCTGAAGACAAACCAAAAGCTAATAGTGAA...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTTCACTATTAGCTTTTaGTTTGTCTTCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLFTISF*FVFRNF
Trigger: GAAGTTCCTGAAGACAAACCAAAAGCTAATAGTGAA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGTTTGAGGCACATTTTTaGGTTGTTTTGGCAACCGGA +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMFEAHF*VVLATG
Trigger: TCCGGTTGCCAAAACAACCCAAAAATGTGCCTCAAA...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000508776.5
3UTR CAA 72 bp CATAAGGGCTCATATACTTGTCTATGCTTCTGTCTCTaGCAGGTTGAAACACCATTTCAGTCTGTTCCCATA +
Preference number: 4 (lower is better)
Translates to: HKGSYTCLCFCL*QVETPFQSVPI
Trigger: TATGGGAACAGACTGAAATGGTGTTTCAACCTGCAAGAGACAGAAGCATAGACAAGTATATGAGCCCTTATG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGTCTTCCACCTTAATGTaGTTGAATAGGGAACAAGGT +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMSSTLM*LNREQG
Trigger: ACCTTGTTCCCTATTCAATCACATTAAGGTGGAAGA...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCTGTGGAAAAACATTCTaGATAGTGAAGCTCCCAATT +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPCGKTF*IVKLPI
Trigger: AATTGGGAGCTTCACTATTCAGAATGTTTTTCCACA...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATCTAACTTATCTTGCATaGTCATCTTCCCCTCATTTT +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNLTYLA*SSSPHF
Trigger: AAAATGAGGGGAAGATGATCATGCAAGATAAGTTAG...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTCTTTGCTACTATTTCTaGAACTTTTACCACAGGATC +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRLCYYF*NFYHRI
Trigger: GATCCTGTGGTAAAAGTTTCAGAAATAGTAGCAAAG...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTACTTGCCTGACAGACTaGACCAAATGTACATTATTT +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRTCLTD*TKCTLF
Trigger: AAATAATGTACATTTGGTTCAGTCTGTCAGGCAAGT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTACTGATCCTTTCAGTTTaGACAATGGGATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELLILSV*TMGSSN
Trigger: ATTTGATGATCCCATTGTGCAAACTGAAAGGATCAG...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGAGATTTGTTCTTTCACTaGAGGAATTCGTGTTGCTCC +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGDLFFH*RNSCCS
Trigger: GGAGCAACACGAATTCCTGCAGTGAAAGAACAAATC...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTCGGAATAAAAATCCCTaGAAAATGCACTACTCCATA +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRRNKNP*KMHYSI
Trigger: TATGGAGTAGTGCATTTTGCAGGGATTTTTATTCCG...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTAAACCGTGTCCTCTTCTaGGCTATTGCTGCTGGGATT +
Preference number: 4 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLNRVLF*AIAAGI
Trigger: AATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTT...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTATTTAAGCCTGCAACCTaGGCTGCAGCCATCACAGAT +
Preference number: 4 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLFKPAT*AAAITD
Trigger: ATCTGTGATGGCTGCAGCCCAGGTTGCAGGCTTAAA...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CAAAAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATCCTGCCACCCAAATATaGATCAAAGGTAGTAGCCAA +
Preference number: 4 (lower is better)
Translates to: QKWLRTTERLLCVPDVKDPATQI*IKGSSQ
Trigger: TTGGCTACTACCTTTGATCCATATTTGGGTGGCAGG...ATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGAGAGAATGGGGCAGGATaGTTCTTACAGAAAACTTCA +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGENGAG*FLQKTS
Trigger: TGAAGTTTTCTGTAAGAACCATCCTGCCCCATTCTC...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAAATGGTTCCTTCTTGTaGAAAGTAATGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: VVCTRCKRWTPWLLARFENGSFL*KVMTFE
Trigger: CTCAAAAGTCATTACTTTCCACAAGAAGGAACCATT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTACAGCTGACTTTGTTTTaGCTCCTGTATGATCAATTT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELQLTLF*LLYDQF
Trigger: AAATTGATCATACAGGAGCCAAAACAAAGTCAGCTG...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGCTACATAGGCTACTCTaGATCGGTAGATCAATACTT +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMLHRLL*IGRSIL
Trigger: AAGTATTGATCTACCGATCCAGAGTAGCCTATGTAG...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACTGTTGAGAAGATCTTaGCCTAGTTGTCTACATAGG +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGLLRRS*PSCLHR
Trigger: CCTATGTAGACAACTAGGCCAAGATCTTCTCAACAG...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTATGACAGCAAAGCTTTaGATTTCTGTGGTACATCAA +
Preference number: 4 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRMTAKL*ISVVHQ
Trigger: TTGATGTACCACAGAAATCCAAAGCTTTGCTGTCAT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CAAAAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATCATTGCAATCCAGCCTaGGTAACAAAGCCATACTCT +
Preference number: 4 (lower is better)
Translates to: QKWLRTTERLLCVPDVKDHCNPA*VTKPYS
Trigger: AGAGTATGGCTTTGTTACCCAGGCTGGATTGCAATG...ATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATATTTGGGAGTCTGAGGTaGGTGGATTACCTGAGGTCA +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLIFGSLR*VDYLRS
Trigger: TGACCTCAGGTAATCCACCCACCTCAGACTCCCAAA...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGCACAGTTGTTCAAATTaGGCCCTGTTCATTTTACTA +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMHSCSN*ALFILL
Trigger: TAGTAAAATGAACAGGGCTCAATTTGAACAACTGTG...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR TCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGATTTCAATGTAGCTGTTaGGAAGATCTTGGCCTAGTT +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGFQCSC*EDLGLV
Trigger: AACTAGGCCAAGATCTTCTCAACAGCTACATTGAAA...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGCTTTGCTACTATTTCTaGAACTTTTACCACAGGATC +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMLCYYF*NFYHRI
Trigger: GATCCTGTGGTAAAAGTTTCAGAAATAGTAGCAAAG...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR GCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATAGACTATCTGGCTCTTTaGTGCATTTCCAATGGCTCG +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLIDYLAL*CISNGS
Trigger: CGAGCCATTGGAAATGCAGCAAAGAGCCAGATAGTC...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCTCATATACTTGTCTATaGTTCTGTCTCTTGCAGGTT +
Preference number: 4 (lower is better)
Translates to: LQVETPFQSVPILKQFQVSYTCL*FCLLQV
Trigger: AACCTGCAAGAGACAGAAGCATAGACAAGTATATGA...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATAATGGTTCCTTCTTGTaGAAAGTAATGACTTTTGAG +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNNGSFL*KVMTFE
Trigger: CTCAAAAGTCATTACTTTCCACAAGAAGGAACCATT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATCACCATCAGACTGTaGAAAAACATTCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: VCTRCKRWTPWLLARFELITIRL*KNILNS
Trigger: ACTATTCAGAATGTTTTTCCACAGTCTGATGGTGAT...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATACACTGAAGATTCCATaGATGTTAACACGAACTTTA +
Preference number: 4 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNTLKIP*MLTRTL
Trigger: TAAAGTTCGTGTTAACATCCATGGAATCTTCAGTGT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGCAGCTGACTTTGTTTTaGCTCCTGTATGATCAATTT +
Preference number: 4 (lower is better)
Translates to: CTRCKRWTPWLLARFELMQLTLF*LLYDQF
Trigger: AAATTGATCATACAGGAGCCAAAACAAAGTCAGCTG...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACTACATAGGCTACTCTaGATCGGTAGATCAATACTT +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGLHRLL*IGRSIL
Trigger: AAGTATTGATCTACCGATCCAGAGTAGCCTATGTAG...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCTTCACTATTAGCTTTTaGTTTGTCTTCAGGAACTTC +
Preference number: 4 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPFTISF*FVFRNF
Trigger: GAAGTTCCTGAAGACAAACCAAAAGCTAATAGTGAA...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGAAGCTTTGGATTTCTGTaGTACATCAATGAGATGGAC +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGSFGFL*YINEMD
Trigger: GTCCATCTCATTGATGTACCACAGAAATCCAAAGCT...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACACAGTTGTTCAAATTaGGCCCTGTTCATTTTACTA +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGHSCSN*ALFILL
Trigger: TAGTAAAATGAACAGGGCTCAATTTGAACAACTGTG...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR TCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATACTGTCTCTTGCAGGTTaGAACACCATTTCAGTCTGT +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLILSLAG*NTISVC
Trigger: ACAGACTGAAATGGTGTTTCAACCTGCAAGAGACAG...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATACCGCACCTTAACTCCTaGACTTCCATTAGGCATTTT +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLIPHLNS*TSIRHF
Trigger: AAAATGCCTAATGGAAGTGCAGGAGTTAAGGTGCGG...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp CAAAAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATCCAGAGGATTTAGTATaGTGTGAGCTGTCTTTTGTT +
Preference number: 4 (lower is better)
Translates to: QKWLRTTERLLCVPDVKDPEDLV*CELSFV
Trigger: AACAAAAGACAGCTCACAGCATACTAAATCCTCTGG...ATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTTTTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR GCA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGAAATAAGGTAGACTGTTaGCAACTATGTATCCATCCT +
Preference number: 4 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGNKVDC*QLCIHP
Trigger: AGGATGGATACATAGTTGGCAACAGTCTACCTTATT...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTACTGTCTACCCAAAGCTaGATTAAAGAGAGCACTCTC +
Preference number: 4 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLLSTQS*IKESTL
Trigger: GAGAGTGCTCTCTTTAATGCAGCTTTGGGTAGACAG...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATAATGATTATGGCTCATTaGAACCTTGACCTCTCAGGC +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLIMIMAH*NLDLSG
Trigger: GCCTGAGAGGTCAAGGTTGCAATGAGCCATAATCAT...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCATCACCATCAGACTGTaGAAAAACATTCTGAATAGT +
Preference number: 4 (lower is better)
Translates to: LQVETPFQSVPILKQFQVITIRL*KNILNS
Trigger: ACTATTCAGAATGTTTTTCCACAGTCTGATGGTGAT...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTAAATGGGATCATCAAATaGTCGCCCATGAAGCTTTTT +
Preference number: 4 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLNGIIK*SPMKLF
Trigger: AAAAAGCTTCATGGGCGATCATTTGATGATCCCATT...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR TCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATAAAGCCACTTTTCATGTaGGTCTTTTTCCAAGACATT +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLIKPLFM*VFFQDI
Trigger: AATGTCTTGGAAAAAGACTCACATGAAAAGTGGCTT...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR GCA 90 bp GCTTTAAATAAGGTAGACTGTTGCCAACTATGTATCCATCCTGTATGTTTGATACTGATCCTTTCAGTTTaGACAATGGGATCATCAAAT +
Preference number: 4 (lower is better)
Translates to: ALNKVDCCQLCIHPVCLILILSV*TMGSSN
Trigger: ATTTGATGATCCCATTGTGCAAACTGAAAGGATCAG...TATCAAACATACAGGATGGATACATAGTTGGCAACAGTCTACCTTATTTAAAGC
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CCA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTATTTGGTTACAAGCCTTaGTCTTTGATCTGCATTAAA +
Preference number: 4 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLFGYKP*SLICIK
Trigger: TTTAATGCAGATCAAAGACCAAGGCTTGTAACCAAA...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS TCA 90 bp TGCTCGCCCTCGCTCGGCAGTAGGACGTCGGGCGGTCGGGCTAGGTaGGAGGCAGGCGACCGGCCGGCCCGGGGCTTTGCGAACGTGTTT +
Preference number: 5 (lower is better)
Translates to: CSPSLGSRTSGGRAR*EAGDRPARGFANVF
Trigger: AAACACGTTCGCAAAGCCCCGGGCCGGCCGGTCGCCTGCCTCTCACCTAGCCCGACCGCCCGACGTCCTACTGCCGAGCGAGGGCGAGCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS GCA 90 bp CTGAACCCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTaGTGGGATTGCGACTCCTACCAGAAGCAAACGAGAGGGGACCCC +
Preference number: 5 (lower is better)
Translates to: LNPSVREPCPLLGYC*WDCDSYQKQTRGDP
Trigger: GGGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGGTTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS GCA 90 bp TCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTGCTGGGATTaGGACTCCTACCAGAAGCAAACGAGAGGGGACCCCAAGTCGCTA +
Preference number: 5 (lower is better)
Translates to: SVREPCPLLGYCCWD*DSYQKQTRGDPKSL
Trigger: TAGCGACTTGGGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS CCA 90 bp AACCCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTGCTaGGATTGCGACTCCTACCAGAAGCAAACGAGAGGGGACCCCAAG +
Preference number: 5 (lower is better)
Translates to: NPSVREPCPLLGYCC*DCDSYQKQTRGDPK
Trigger: CTTGGGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS GCA 90 bp GTACTGAACCCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTaGTGCTGGGATTGCGACTCCTACCAGAAGCAAACGAGAGGGGAC +
Preference number: 5 (lower is better)
Translates to: VLNPSVREPCPLLGY*CWDCDSYQKQTRGD
Trigger: GTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGGTTCAGTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGGCCGGCCCGGGGCTTaGCGAACGTGTTTTGAGGCA +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLGRPGA*RTCFEA
Trigger: TGCCTCAAAACACGTTCGCAAAGCCCCGGGCCGGCC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACTCTGTTACCCCCAGGTaGGAGTGCAGTGGCAGGATC +
Preference number: 5 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHSVTPR*ECSGRI
Trigger: GATCCTGCCACTGCACTCCAACCTGGGGGTAACAGA...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTCAACCGGAGGCGTGCTaGTCACGGCGGCAGGATGCT +
Preference number: 5 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRQPEAC*SRRQDA
Trigger: AGCATCCTGCCGCCGTGACAAGCACGCCTCCGGTTG...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTGCGACTCATTGGCTaGCTCGCCCTCGCTCGGCAG +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFELRLIG*LALARQ
Trigger: CTGCCGAGCGAGGGCGAGCAAGCCAATGAGTCGCAA...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAGGCAGGAGAATTGCTaGAGGCTTGAGCCCAGGAGG +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLRQENC*RLEPRR
Trigger: CCTCCTGGGCTCAAGCCTCAAGCAATTCTCCTGCCT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACTATTGCTGCTGGGATaGCGACTCCTACCAGAAGCA +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFELLLLG*RLLPEA
Trigger: TGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTTCCTCTTCTGGGCTATaGCTGCTGGGATTGCGACTC +
Preference number: 5 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRSSSGL*LLGLRL
Trigger: GAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGA...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTATCCTCTTCTGGGCTATaGCTGCTGGGATTGCGACTC +
Preference number: 5 (lower is better)
Translates to: VCTRCKRWTPWLLARFELSSSGL*LLGLRL
Trigger: GAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGA...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGCTGAGACAGCTGACTTaGTTTTGGCTCCTGTATGAT +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLRQLT*FWLLYD
Trigger: ATCATACAGGAGCCAAAACAAAGTCAGCTGTCTCAG...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTCTGTCTCTTGCAGGTaGAAACACCATTTCAGTCTG +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARSVSCR*KHHFSL
Trigger: CAGACTGAAATGGTGTTTCAACCTGCAAGAGACAGA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCATTTTTGGGTTGTTTaGGCAACCGGAGGCGTGCTT +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLHFWVV*ATGGVL
Trigger: AAGCACGCCTCCGGTTGCCAAAACAACCCAAAAATG...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACTATTGCTGCTGGGATaGCGACTCATTGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFELLLLG*RLIGLL
Trigger: GAGCAAGCCAATGAGTCGCAATCCCAGCAGCAATAG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACCACTCTGTCCATCCATaGGGCCATTGTGTTCACTAT +
Preference number: 5 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYHSVHP*GHCVHY
Trigger: ATAGTGAACACAATGGCCCAATGGATGGACAGAGTG...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGGATGACAGCAAAGCTTaGGATTTCTGTGGTACATCA +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARDDSKA*DFCGTS
Trigger: TGATGTACCACAGAAATCCAAAGCTTTGCTGTCATC...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCAGGCACATTTTTGGGTaGTTTTGGCAACCGGAGGCG +
Preference number: 5 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPRHIFG*FWQPEA
Trigger: CGCCTCCGGTTGCCAAAACAACCCAAAAATGTGCCT...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp CAAAAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATTGGGATTGCGACTCATaGGCTTGCTCGCCCTCGCTC +
Preference number: 5 (lower is better)
Translates to: QKWLRTTERLLCVPDVKDWDCDS*ACSPSL
Trigger: GAGCGAGGGCGAGCAAGCCAATGAGTCGCAATCCCA...ATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCAATGGCTCGAGTTCTaGATCCCAATGATATACAGG +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLQWLEF*IPMIYR
Trigger: CCTGTATATCATTGGGATCAAGAACTCGAGCCATTG...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGACTTTAACCTTCACTTaGGAACTATCACCATCAGAC +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARTLTFT*ELSPSD
Trigger: GTCTGATGGTGATAGTTCCAAAGTGAAGGTTAAAGT...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACAGTCATTTAAGGCTTTaGGTCTCTCTTCATGCTCCA +
Preference number: 5 (lower is better)
Translates to: ERLLCVPDVKDGPRGYLHSHLRL*VSLHAP
Trigger: TGGAGCATGAAGAGAGACCAAAAGCCTTAAATGACT...GTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGCTATTAGCTTTTGGTTaGTCTTCAGGAACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARLLAFG*SSGTSA
Trigger: AGCAGAAGTTCCTGAAGACAAACCAAAAGCTAATAG...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACACTCTGTCCATCCATaGGGCCATTGTGTTCACTAT +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFEHSVHP*GHCVHY
Trigger: ATAGTGAACACAATGGCCCAATGGATGGACAGAGTG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGCTACTCAGGAGAGGTaGAGGCAGAAAAATCGCTTG +
Preference number: 5 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRATQER*RQKNRL
Trigger: CAAGCGATTTTTCTGCCTCAACCTCTCCTGAGTAGC...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCTTTGCGAACGTGTTTaGAGGCACATTTTTGGGTTG +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLLCERV*RHIFGL
Trigger: CAACCCAAAAATGTGCCTCAAAACACGTTCGCAAAG...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGGAAGATCTGATGCATTaGCACTCATTAGCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLAREDLMH*HSLASL
Trigger: TAAAGAAGCTAATGAGTGCAAATGCATCAGATCTTC...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTCTGAGACAGCTGACTTaGTTTTGGCTCCTGTATGAT +
Preference number: 5 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFLRQLT*FWLLYD
Trigger: ATCATACAGGAGCCAAAACAAAGTCAGCTGTCTCAG...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp CGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTTAATCGGTCTTGTTaGTCTGAGACAGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: RLLCVPDVKDGPRGYLHGFNRSC*SETADF
Trigger: AAAGTCAGCTGTCTCAGACAAACAAGACCGATTAAA...ACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCTCCATGTACTTCATTaGAATAGGCTGGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLLHVLH*NRLAVF
Trigger: AAATACGGCCAGCCTATTCAAATGAAGTACATGGAG...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCCATCCATTGGGCCATaGTGTTCACTATTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLPSIGP*CSLLAF
Trigger: AAAAGCTAATAGTGAACACAATGGCCCAATGGATGG...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGCCATCCATTGGGCCATaGTGTTCACTATTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLPSIGP*CSLLAF
Trigger: AAAAGCTAATAGTGAACACAATGGCCCAATGGATGG...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGTTTCTCAGGCTGGTCTaGAACTCCTGGGTTCAAGTG +
Preference number: 5 (lower is better)
Translates to: CTRCKRWTPWLLARFELMFLRLV*NSWVQV
Trigger: CACTTGAACCCAGGAGTTCAAGACCAGCCTGAGAAA...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp GCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTCTTTTTGCTTGTTTaGGTTACAAGCCTTGGTCTT +
Preference number: 5 (lower is better)
Translates to: ASVVCTRCKRWTPWLLARFFLLV*VTSLGL
Trigger: AAGACCAAGGCTTGTAACCAAAACAAGCAAAAAGAA...CCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGTTATGGATTTGTACTaGCCTGACAGACTGAACCAA +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLVMDLY*PDRLNQ
Trigger: TTGGTTCAGTCTGTCAGGCAAGTACAAATCCATAAC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS TCA 90 bp TGGAGCATCACTGTGATCGCCTTCCAAATTTTGCTTCTCAATTACTaGTGCGCTAGCCACACTGAAGATTCCATGGATGTTAACACGAAC +
Preference number: 5 (lower is better)
Translates to: WSITVIAFQILLLNY*CASHTEDSMDVNTN
Trigger: GTTCGTGTTAACATCCATGGAATCTTCAGTGTGGCTAGCGCATCAGTAATTGAGAAGCAAAATTTGGAAGGCGATCACAGTGATGCTCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS-3UTR CAA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTCAATGGCTCGAGTTCTaGATCCCAATGATATACAGG +
Preference number: 5 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRQWLEF*IPMIYR
Trigger: CCTGTATATCATTGGGATCAAGAACTCGAGCCATTG...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTTGATGCCCTTCTTCTaGATCAACCTGCATTTTATC +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLLMPFF*INLHFI
Trigger: GATAAAATGCAGGTTGATCAAGAAGAAGGGCATCAA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGTTCAGCATGACATTTTaGATGCCCTTCTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLFSMTF*MPFFLI
Trigger: GATCAAGAAGAAGGGCATCAAAAATGTCATGCTGAA...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGTTCAGCATGACATTTTaGATGCCCTTCTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLFSMTF*MPFFLI
Trigger: GATCAAGAAGAAGGGCATCAAAAATGTCATGCTGAA...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp ACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACATAAACTTGTTTAGGTaGGTCCTCTCCGTCTTCATA +
Preference number: 5 (lower is better)
Translates to: TTERLLCVPDVKDGPRGYINLFR*VLSVFI
Trigger: TATGAAGACGGAGAGGACCAACCTAAACAAGTTTAT...GTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACTCCATGTACTTCATTaGAATAGGCTGGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFELHVLH*NRLAVF
Trigger: AAATACGGCCAGCCTATTCAAATGAAGTACATGGAG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCTATTAGCTTTTGGTTaGTCTTCAGGAACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLLLAFG*SSGTSA
Trigger: AGCAGAAGTTCCTGAAGACAAACCAAAAGCTAATAG...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCCACTCTGTCCATCCATaGGGCCATTGTGTTCACTAT +
Preference number: 5 (lower is better)
Translates to: LQVETPFQSVPILKQFQVHSVHP*GHCVHY
Trigger: ATAGTGAACACAATGGCCCAATGGATGGACAGAGTG...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTACAACTGAGCGTCTGTaGTGTGTACCAGATGTAAAA +
Preference number: 5 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFTTERL*CVPDVK
Trigger: TTTTACATCTGGTACACACAACAGACGCTCAGTTGT...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAACTATGCTTCTGTCTCTaGCAGGTTGAAACACCATTT +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFELCFCL*QVETPF
Trigger: AAATGGTGTTTCAACCTGCAAGAGACAGAAGCATAG...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGGAAGATCTGATGCATTaGCACTCATTAGCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLEDLMH*HSLASL
Trigger: TAAAGAAGCTAATGAGTGCAAATGCATCAGATCTTC...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp ACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGGAAGATCTGATGCATTaGCACTCATTAGCTTCTTTA +
Preference number: 5 (lower is better)
Translates to: TERLLCVPDVKDGPRGYLEDLMH*HSLASL
Trigger: TAAAGAAGCTAATGAGTGCAAATGCATCAGATCTTC...CAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp CTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGACACAGTTGTTCAAATaGAGCCCTGTTCATTTTACT +
Preference number: 5 (lower is better)
Translates to: LLCVPDVKDGPRGYLHGLTQLFK*SPVHFT
Trigger: AGTAAAATGAACAGGGCTCAATTTGAACAACTGTGT...CAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp GTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAAACTTTAACCTTCACTTaGGAACTATCACCATCAGAC +
Preference number: 5 (lower is better)
Translates to: VVCTRCKRWTPWLLARFETLTFT*ELSPSD
Trigger: GTCTGATGGTGATAGTTCCAAAGTGAAGGTTAAAGT...TTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTTTGATGCCCTTCTTCTaGATCAACCTGCATTTTATC +
Preference number: 5 (lower is better)
Translates to: SVVCTRCKRWTPWLLARFLMPFF*INLHFI
Trigger: GATAAAATGCAGGTTGATCAAGAAGAAGGGCATCAA...AAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAACAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTACAACTGAGCGTCTGTaGTGTGTACCAGATGTAAAA +
Preference number: 5 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRTTERL*CVPDVK
Trigger: TTTTACATCTGGTACACACAACAGACGCTCAGTTGT...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAGCAATACTCACAAAATaGACCTCTTTTGGTCCGGAA +
Preference number: 5 (lower is better)
Translates to: VCTRCKRWTPWLLARFELAILTK*TSFGPE
Trigger: TTCCGGACCAAAAGAGGTCAATTTTGTGAGTATTGC...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCACTTTAACCTTCACTTaGGAACTATCACCATCAGAC +
Preference number: 5 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPTLTFT*ELSPSD
Trigger: GTCTGATGGTGATAGTTCCAAAGTGAAGGTTAAAGT...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACTGAGACAGCTGACTTaGTTTTGGCTCCTGTATGAT +
Preference number: 5 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGLRQLT*FWLLYD
Trigger: ATCATACAGGAGCCAAAACAAAGTCAGCTGTCTCAG...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCTTTAATCGGTCTTGTTaGTCTGAGACAGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPFNRSC*SETADF
Trigger: AAAGTCAGCTGTCTCAGACAAACAAGACCGATTAAA...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp TTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCCGTTTTAATCGGTCTTGTTaGTCTGAGACAGCTGACTTT +
Preference number: 5 (lower is better)
Translates to: LRTTERLLCVPDVKDGPRFNRSC*SETADF
Trigger: AAAGTCAGCTGTCTCAGACAAACAAGACCGATTAAA...ACGGGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCATAAACTTGTTTAGGTaGGTCCTCTCCGTCTTCATA +
Preference number: 5 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPINLFR*VLSVFI
Trigger: TATGAAGACGGAGAGGACCAACCTAAACAAGTTTAT...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp GTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATAAACTTGTTTAGGTaGGTCCTCTCCGTCTTCATA +
Preference number: 5 (lower is better)
Translates to: VCTRCKRWTPWLLARFELINLFR*VLSVFI
Trigger: TATGAAGACGGAGAGGACCAACCTAAACAAGTTTAT...TAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGAGTCATTTAAGGCTTTaGGTCTCTCTTCATGCTCCA +
Preference number: 5 (lower is better)
Translates to: CTRCKRWTPWLLARFELMSHLRL*VSLHAP
Trigger: TGGAGCATGAAGAGAGACCAAAAGCCTTAAATGACT...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGACAACTGAGCGTCTGTaGTGTGTACCAGATGTAAAA +
Preference number: 5 (lower is better)
Translates to: CTRCKRWTPWLLARFELMTTERL*CVPDVK
Trigger: TTTTACATCTGGTACACACAACAGACGCTCAGTTGT...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCCAACAATGTGAACAAGTaGGGTGATGAAGCACAGATA +
Preference number: 5 (lower is better)
Translates to: WLRTTERLLCVPDVKDGPNNVNK*GDEAQI
Trigger: TATCTGTGCTTCATCACCCAACTTGTTCACATTGTT...GGGTCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TTGTGTGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATACACAGTTGTTCAAATaGAGCCCTGTTCATTTTACT +
Preference number: 5 (lower is better)
Translates to: LCVPDVKDGPRGYLHGLNTQLFK*SPVHFT
Trigger: AGTAAAATGAACAGGGCTCAATTTGAACAACTGTGT...ATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACACACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCTTGATGCCCTTCTTCTaGATCAACCTGCATTTTATC +
Preference number: 5 (lower is better)
Translates to: LQVETPFQSVPILKQFQVLMPFF*INLHFI
Trigger: GATAAAATGCAGGTTGATCAAGAAGAAGGGCATCAA...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS-3UTR CAA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGTTCAGCATGACATTTTaGATGCCCTTCTTCTTGATC +
Preference number: 5 (lower is better)
Translates to: CTRCKRWTPWLLARFELMFSMTF*MPFFLI
Trigger: GATCAAGAAGAAGGGCATCAAAAATGTCATGCTGAA...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACTCCATGTACTTCATTaGAATAGGCTGGCCGTATTT +
Preference number: 5 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGLHVLH*NRLAVF
Trigger: AAATACGGCCAGCCTATTCAAATGAAGTACATGGAG...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS-3UTR CAA 90 bp AAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATGGACCATCCATTGGGCCATaGTGTTCACTATTAGCTTTT +
Preference number: 5 (lower is better)
Translates to: KWLRTTERLLCVPDVKDGPSIGP*CSLLAF
Trigger: AAAAGCTAATAGTGAACACAATGGCCCAATGGATGG...TCCATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508776.5
CDS CCA 90 bp TTTTGCTTCTCAATTACTGATGCGCTAGCCACACTGAAGATTCCATaGATGTTAACACGAACTTTAACCTTCACTTTGGAACTATCACCA +
Preference number: 5 (lower is better)
Translates to: FCFSITDALATLKIP*MLTRTLTFTLELSP
Trigger: TGGTGATAGTTCCAAAGTGAAGGTTAAAGTTCGTGTTAACATCCATGGAATCTTCAGTGTGGCTAGCGCATCAGTAATTGAGAAGCAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS-3UTR CAA 90 bp TGTACCAGATGTAAAAGATGGACCCCGTGGTTACTTGCACGGTTTGAATTAATGACACAGTTGTTCAAATaGAGCCCTGTTCATTTTACT +
Preference number: 5 (lower is better)
Translates to: CTRCKRWTPWLLARFELMTQLFK*SPVHFT
Trigger: AGTAAAATGAACAGGGCTCAATTTGAACAACTGTGT...CATTAATTCAAACCGTGCAAGTAACCACGGGGTCCATCTTTTACATCTGGTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp TTGCAGGTTGAAACACCATTTCAGTCTGTTCCCATACTTAAGCAGTTTCAGGTCGCCTCTAATTACATTTaGACATCTACATTCTGGGTA +
Preference number: 5 (lower is better)
Translates to: LQVETPFQSVPILKQFQVASNYI*TSTFWV
Trigger: TACCCAGAATGTAGATGTCAAAATGTAATTAGAGGC...GACCTGAAACTGCTTAAGTATGGGAACAGACTGAAATGGTGTTTCAACCTGCAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS TCA 90 bp ACAAGGCCCGAGAGTTTTCTTTCACATTTATCTTATATTTGGTCTTaGACTCATCACAGAAGTAGTCTACTAAAGCCTCATCAAAGTTCC +
Preference number: 5 (lower is better)
Translates to: TRPESFLSHLSYIWS*THHRSSLLKPHQSS
Trigger: GGAACTTTGATGAGGCTTTAGTAGACTACTTCTGTGATGAGTTCAAGACCAAATATAAGATAAATGTGAAAGAAAACTCTCGGGCCTTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS-3UTR CAA 90 bp CAAAAGTGGTTAAGAACAACTGAGCGTCTGTTGTGTGTACCAGATGTAAAAGATTCCGGAAAGCTTAGATaGTCTTGTAAATCTAATTCG +
Preference number: 5 (lower is better)
Translates to: QKWLRTTERLLCVPDVKDSGKLR*SCKSNS
Trigger: CGAATTAGATTTACAAGACAATCTAAGCTTTCCGGA...ATCTTTTACATCTGGTACACACAACAGACGCTCAGTTGTTCTTAACCACTTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS TCA 90 bp TCCTTTGACTTTGCTACTATTTCTGAAACTTTTACCACAGGATCTTaGGTGAGACTTAGTTTGTTCTGTGCATTCATCTTACTATTCAGC +
Preference number: 5 (lower is better)
Translates to: SFDFATISETFTTGS*VRLSLFCAFILLFS
Trigger: GCTGAATAGTAAGATGAATGCACAGAACAAACTAAGTCTCACTCAAGATCCTGTGGTAAAAGTTTCAGAAATAGTAGCAAAGTCAAAGGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS-3UTR CAA 90 bp CAACTTAAGATCATAAACCATTCTCATGTCTGCTCATTAAAGCTAAAGGGTCTACTATTAGCTTTTGGTTaGTCTTCAGGAACTTCTGCT +
Preference number: 5 (lower is better)
Translates to: QLKIINHSHVCSLKLKGLLLAFG*SSGTSA
Trigger: AGCAGAAGTTCCTGAAGACAAACCAAAAGCTAATAG...TAGACCCTTTAGCTTTAATGAGCAGACATGAGAATGGTTTATGATCTTAAGTTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000296464.9
CDS GCA 72 bp GCTGTCCTGGCTGGCGGGCGCCGCCCCCTCACCCCCTaGCCTCAGAAGGGCTCGCCCGCAGGCCTCGCCTCC +
Preference number: 6 (lower is better)
Translates to: AVLAGGRRPLTP*PQKGSPAGLAS
Trigger: GGAGGCGAGGCCTGCGGGCGAGCCCTTCTGAGGGCAGGGGGTGAGGGGGCGGCGCCCGCCAGCCAGGACAGC
79% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS TCA 72 bp TCGCTCGGCAGTAGGACGTCGGGCGGTCGGGCTAGGTaGGAGGCAGGCGACCGGCCGGCCCGGGGCTTTGCG +
Preference number: 6 (lower is better)
Translates to: SLGSRTSGGRAR*EAGDRPARGFA
Trigger: CGCAAAGCCCCGGGCCGGCCGGTCGCCTGCCTCTCACCTAGCCCGACCGCCCGACGTCCTACTGCCGAGCGA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS GCA 72 bp TTGGCAACCGGAGGCGTGCTTGTCACGGCGGCAGGATaGTGTCCTGGCTGGCGGGCGCCGCCCCCTCACCCC +
Preference number: 6 (lower is better)
Translates to: LATGGVLVTAAG*CPGWRAPPPHP
Trigger: GGGGTGAGGGGGCGGCGCCCGCCAGCCAGGACAGCATCCTGCCGCCGTGACAAGCACGCCTCCGGTTGCCAA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS CAA 72 bp CACATTTTTGGGTTGTTTTGGCAACCGGAGGCGTGCTaGTCACGGCGGCAGGATGCTGTCCTGGCTGGCGGG +
Preference number: 6 (lower is better)
Translates to: HIFGLFWQPEAC*SRRQDAVLAGG
Trigger: CCCGCCAGCCAGGACAGCATCCTGCCGCCGTGACAAGCACGCCTCCGGTTGCCAAAACAACCCAAAAATGTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS GCA 72 bp AGGCACATTTTTGGGTTGTTTTGGCAACCGGAGGCGTaGTTGTCACGGCGGCAGGATGCTGTCCTGGCTGGC +
Preference number: 6 (lower is better)
Translates to: RHIFGLFWQPEA*LSRRQDAVLAG
Trigger: GCCAGCCAGGACAGCATCCTGCCGCCGTGACAAGCACGCCTCCGGTTGCCAAAACAACCCAAAAATGTGCCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS GCA 72 bp TCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTaGTGGGATTGCGACTCATTGGCTTGCTCGCCCTCG +
Preference number: 6 (lower is better)
Translates to: SVREPCPLLGYC*WDCDSLACSPS
Trigger: CGAGGGCGAGCAAGCCAATGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS GCA 72 bp CCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTaGTGCTGGGATTGCGACTCATTGGCTTGCTCGCCC +
Preference number: 6 (lower is better)
Translates to: PSVREPCPLLGY*CWDCDSLACSP
Trigger: GGGCGAGCAAGCCAATGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS CCA 72 bp GTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTGCTaGGATTGCGACTCATTGGCTTGCTCGCCCTCGCTC +
Preference number: 6 (lower is better)
Translates to: VREPCPLLGYCC*DCDSLACSPSL
Trigger: GAGCGAGGGCGAGCAAGCCAATGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS CAA 72 bp CCCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATaGCTGCTGGGATTGCGACTCATTGGCTTGCTCGCC +
Preference number: 6 (lower is better)
Translates to: PFGTGTVSSSGL*LLGLRLIGLLA
Trigger: GGCGAGCAAGCCAATGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000508776.5
CDS CAA 90 bp TTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTGCTGGGATaGCGACTCCTACCAGAAGCAAACGAGAGGGGACCCCAAGTCGCT +
Preference number: 6 (lower is better)
Translates to: FGTGTVSSSGLLLLG*RLLPEANERGPQVA
Trigger: AGCGACTTGGGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS GCA 72 bp GAACCGTGTCCTCTTCTGGGCTATTGCTGCTGGGATTaGGACTCCTACCAGAAGCAAACGAGAGGGGACCCC +
Preference number: 6 (lower is better)
Translates to: EPCPLLGYCCWD*DSYQKQTRGDP
Trigger: GGGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS CAA 72 bp GGAACCGTGTCCTCTTCTGGGCTATTGCTGCTGGGATaGCGACTCCTACCAGAAGCAAACGAGAGGGGACCC +
Preference number: 6 (lower is better)
Translates to: GTVSSSGLLLLG*RLLPEANERGP
Trigger: GGGTCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS CAA 90 bp GGTACTGAACCCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATaGCTGCTGGGATTGCGACTCCTACCAGAAGCAAACGAGAGGGGA +
Preference number: 6 (lower is better)
Translates to: GTEPFGTGTVSSSGL*LLGLRLLPEANERG
Trigger: TCCCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGGTTCAGTACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS GCA 72 bp CCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTaGTGCTGGGATTGCGACTCCTACCAGAAGCAAACG +
Preference number: 6 (lower is better)
Translates to: PSVREPCPLLGY*CWDCDSYQKQT
Trigger: CGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS CCA 72 bp GTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTGCTaGGATTGCGACTCCTACCAGAAGCAAACGAGAGGG +
Preference number: 6 (lower is better)
Translates to: VREPCPLLGYCC*DCDSYQKQTRG
Trigger: CCCTCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS CAA 72 bp CCCTTCGGTACGGGAACCGTGTCCTCTTCTGGGCTATaGCTGCTGGGATTGCGACTCCTACCAGAAGCAAAC +
Preference number: 6 (lower is better)
Translates to: PFGTGTVSSSGL*LLGLRLLPEAN
Trigger: GTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS TCA 72 bp CGATGCCGCCACTTCTCGCGACAGCAATGTAGCAGTTaGGAAAGCCGAGGTCAATGCCAACCACAGACATCC +
Preference number: 6 (lower is better)
Translates to: RCRHFSRQQCSS*ESRGQCQPQTS
Trigger: GGATGTCTGTGGTTGGCATTGACCTCGGCTTTCTCAACTGCTACATTGCTGTCGCGAGAAGTGGCGGCATCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000508549.5
ENST00000508776.5
CDS GCA 72 bp TCGGTACGGGAACCGTGTCCTCTTCTGGGCTATTGCTaGTGGGATTGCGACTCCTACCAGAAGCAAACGAGA +
Preference number: 6 (lower is better)
Translates to: SVREPCPLLGYC*WDCDSYQKQTR
Trigger: TCTCGTTTGCTTCTGGTAGGAGTCGCAATCCCAGCAGCAATAGCCCAGAAGAGGACACGGTTCCCGTACCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000296464.9
ENST00000508549.5
CDS CAA 72 bp TCTGGCTCTTTGCTGCATTTCCAATGGCTCGAGTTCTaGATCCCAATGATATACAGGCCGGGGTACACCTGT +
Preference number: 6 (lower is better)
Translates to: SGSLLHFQWLEF*IPMIYRPGYTC
Trigger: ACAGGTGTACCCCGGCCTGTATATCATTGGGATCAAGAACTCGAGCCATTGGAAATGCAGCAAAGAGCCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000508549.5
ENST00000508776.5
CDS CCA 72 bp TCATTCATCAACCTTAAACAATTTAAGCCTGCAACCTaGGCTGCAGCCATCACAGATCTTCTCTCGGCATCA +
Preference number: 6 (lower is better)
Translates to: SFINLKQFKPAT*AAAITDLLSAS
Trigger: TGATGCCGAGAGAAGATCTGTGATGGCTGCAGCCCAGGTTGCAGGCTTAAATTGTTTAAGGTTGATGAATGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS CCA 72 bp CTTGTTCCATTACTGCTTTTAAAGGTGGTTCAACCCTaGCCAAAAGGGAAGCACACAGTTGTTCAAATTGAG +
Preference number: 6 (lower is better)
Translates to: LVPLLLLKVVQP*PKGKHTVVQIE
Trigger: CTCAATTTGAACAACTGTGTGCTTCCCTTTTGGCCAGGGTTGAACCACCTTTAAAAGCAGTAATGGAACAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS GCA 72 bp GTCTCTTTAAGCTTGGCTAACAGCATTCCAGTAACTTaGTCAATTGCAAAAGGTCTCTCTTCCTCTAAGTAC +
Preference number: 6 (lower is better)
Translates to: VSLSLANSIPVT*SIAKGLSSSKY
Trigger: GTACTTAGAGGAAGAGAGACCTTTTGCAATTGAGCAAGTTACTGGAATGCTGTTAGCCAAGCTTAAAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS CAA 90 bp GAATCTGATTTAGTTTCAGTTCCACTCTGTCCATCCATTGGGCCATaGTGTTCACTATTAGCTTTTGGTTTGTCTTCAGGAACTTCTGCT +
Preference number: 6 (lower is better)
Translates to: ESDLVSVPLCPSIGP*CSLLAFGLSSGTSA
Trigger: AGCAGAAGTTCCTGAAGACAAACCAAAAGCTAATAGTGAACACAATGGCCCAATGGATGGACAGAGTGGAACTGAAACTAAATCAGATTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS CCA 72 bp TCAATTACTGATGCGCTAGCCACACTGAAGATTCCATaGATGTTAACACGAACTTTAACCTTCACTTTGGAA +
Preference number: 6 (lower is better)
Translates to: SITDALATLKIP*MLTRTLTFTLE
Trigger: TTCCAAAGTGAAGGTTAAAGTTCGTGTTAACATCCATGGAATCTTCAGTGTGGCTAGCGCATCAGTAATTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS CCA 72 bp AGAAGATCTTGGCCTAGTTGTCTACATAGGCTACTCTaGATCGGTAGATCAATACTTTTGACTTTTCCTTTT +
Preference number: 6 (lower is better)
Translates to: RRSWPSCLHRLL*IGRSILLTFPF
Trigger: AAAAGGAAAAGTCAAAAGTATTGATCTACCGATCCAGAGTAGCCTATGTAGACAACTAGGCCAAGATCTTCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5
CDS CAA 72 bp AATTTCCTCTTCTGGAGTGTGTTCAGCATGACATTTTaGATGCCCTTCTTCTTGATCAACCTGCATTTTATC +
Preference number: 6 (lower is better)
Translates to: NFLFWSVFSMTF*MPFFLINLHFI
Trigger: GATAAAATGCAGGTTGATCAAGAAGAAGGGCATCAAAAATGTCATGCTGAACACACTCCAGAAGAGGAAATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
ENST00000515262.1
CDS TCA 72 bp CACTTCCATCTTCAAAAGAGGTCTTCCACCTTAATGTaGTTGAATAGGGAACAAGGTCTGTTATGGAAAATT +
Preference number: 6 (lower is better)
Translates to: HFHLQKRSSTLM*LNREQGLLWKI
Trigger: AATTTTCCATAACAGACCTTGTTCCCTATTCAATCACATTAAGGTGGAAGACCTCTTTTGAAGATGGAAGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS CAA 90 bp TGTATGATCAATTTCCTCTTCTGGAGTGTGTTCAGCATGACATTTTaGATGCCCTTCTTCTTGATCAACCTGCATTTTATCCATATTATC +
Preference number: 6 (lower is better)
Translates to: CMINFLFWSVFSMTF*MPFFLINLHFIHII
Trigger: GATAATATGGATAAAATGCAGGTTGATCAAGAAGAAGGGCATCAAAAATGTCATGCTGAACACACTCCAGAAGAGGAAATTGATCATACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508549.5
ENST00000508776.5
CDS TCA 72 bp TTTGCTACTATTTCTGAAACTTTTACCACAGGATCTTaGGTGAGACTTAGTTTGTTCTGTGCATTCATCTTA +
Preference number: 6 (lower is better)
Translates to: FATISETFTTGS*VRLSLFCAFIL
Trigger: TAAGATGAATGCACAGAACAAACTAAGTCTCACTCAAGATCCTGTGGTAAAAGTTTCAGAAATAGTAGCAAA
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000296464.9
ENST00000505726.1
ENST00000508776.5