Pregenerated sensors for HSPA13 (Homo sapiens)
Ensembl gene IDs: ENSG00000155304Ensembl transcript IDs: ENST00000285667.4, ENST00000478035.1
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAACCACTGTAAATACCTaGCATCAACACGGTCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: LNSMLYSPGLTENINKETTTVNT*HQHGPS Trigger: TGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGT...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACCCTGTATCTAAATGTTaGCCTCTAGGTAAATCTGTG | + |
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Preference number: 2 (lower is better) Translates to: QHFNILSNSAMDKAEILYPVSKC*PLGKSV Trigger: CACAGATTTACCTAGAGGGCAACATTTAGATACAGG...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR TCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAAATCCAAGCAGAGAATaGTGTACAGGACATAAAGGA | + |
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Preference number: 2 (lower is better) Translates to: LNSMLYSPGLTENINKETNPSRE*CTGHKG Trigger: TCCTTTATGTCCTGTACATCATTCTCTGCTTGGATT...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACCTTTCTTGGTCCCTGTaGTTTTTCTTAAAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: QHFNILSNSAMDKAEILYLSWSL*FFLKET Trigger: TGTTTCCTTTAAGAAAAACCACAGGGACCAAGAAAG...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR GCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAAAAACAAACAACTCTaGTCCAAATGCCGATTTGTA | + |
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Preference number: 2 (lower is better) Translates to: QHFNILSNSAMDKAEILYKNKQL*SKCRFV Trigger: TACAAATCGGCATTTGGAGCAGAGTTGTTTGTTTTT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAATGTTAAGTGCATATaGTTATCAACCTCCAGAATC | + |
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Preference number: 2 (lower is better) Translates to: QHFNILSNSAMDKAEILYNVKCI*LSTSRI Trigger: GATTCTGGAGGTTGATAACCATATGCACTTAACATT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR GCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAAAAACTCCTGGAGAATaGAGATTACAAGAATATGAC | + |
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Preference number: 2 (lower is better) Translates to: LNSMLYSPGLTENINKETKTPGE*RLQEYD Trigger: GTCATATTCTTGTAATCTGCATTCTCCAGGAGTTTT...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR-3UTR CAA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACCGATTTGTAGAAACCTaGCCACAATGGCTTCCACAT | + |
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Preference number: 3 (lower is better) Translates to: QHFNILSNSAMDKAEILYRFVET*PQWLPH Trigger: ATGTGGAAGCCATTGTGGCAAGGTTTCTACAAATCG...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR GCA 72 bp | GAAACAAACAACAAAAACAAACAACTCTGCTCCAAATaGCGATTTGTAGAAACCTTGCCACAATGGCTTCCA | + |
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Preference number: 3 (lower is better) Translates to: ETNNKNKQLCSK*RFVETLPQWLP Trigger: TGGAAGCCATTGTGGCAAGGTTTCTACAAATCGGCATTTGGAGCAGAGTTGTTTGTTTTTGTTGTTTGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| 3UTR GCA 72 bp | TTCTTAAAGGAAACAAACAACAAAAACAAACAACTCTaGTCCAAATGCCGATTTGTAGAAACCTTGCCACAA | + |
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Preference number: 3 (lower is better) Translates to: FLKETNNKNKQL*SKCRFVETLPQ Trigger: TTGTGGCAAGGTTTCTACAAATCGGCATTTGGAGCAGAGTTGTTTGTTTTTGTTGTTTGTTTCCTTTAAGAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAGATCGTCATCTCTCTaGCCATCACAGTCCCGCCGA | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYRSSSL*PSQSRR Trigger: TCGGCGGGACTGTGATGGCCAGAGAGATGACGATCT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATGGTTCCTTCCTGTCCTaGTCCTCCACCGTTAGTAAT | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNGSFLS*SSTVSN Trigger: ATTACTAACGGTGGAGGAGCAGGACAGGAAGGAACC...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAGCCTCCATCAATCCCTaGTTGGATAGCCACTCCCGT | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETASINP*LDSHSR Trigger: ACGGGAGTGGCTATCCAAGCAGGGATTGATGGAGGC...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATTCTATCACCAAGACGTaGAAGACGTCAGCCTTGTGG | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNSITKT*KTSALW Trigger: CCACAAGGCTGACGTCTTCCACGTCTTGGTGATAGA...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATCCATCAATCCCTGCTTaGATAGCCACTCCCGTTACT | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNPSIPA*IATPVT Trigger: AGTAACGGGAGTGGCTATCCAAGCAGGGATTGATGG...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATCCATGCTGGGTATGCTaGTATGCCCATTTTCATCTG | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNPCWVC*YAHFHL Trigger: CAGATGAAAATGGGCATATCAGCATACCCAGCATGG...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACCTTCAGGACATGAGATaGGCTGCCTGCCCTATTTTG | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYLQDMR*AACPIL Trigger: CAAAATAGGGCAGGCAGCTCATCTCATGTCCTGAAG...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACCCACTGTTCACGCGATaGTCATCTGCTGAGGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYPLFTR*SSAEES Trigger: ACTTTCCTCAGCAGATGACCATCGCGTGAACAGTGG...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATATTCTGGGGACACTGTaGTGGTCTCATTACTTGTCA | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNILGTL*WSHYLS Trigger: TGACAAGTAATGAGACCATCACAGTGTCCCCAGAAT...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGCGATGGTCATCTGCTaGGGAAAGTTTGTCTTTTGG | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYAMVIC*GKFVFW Trigger: CCAAAAGACAAACTTTCCTCAGCAGATGACCATCGC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGAATTTCTAAAGCACTaGCTTGGAGAGGCCAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYEFLKH*LGEAKS Trigger: GCTCTTGGCCTCTCCAAGTCAGTGCTTTAGAAATTC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATACCACTGTAAATACCTaGCATCAACACGGTCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNTTVNT*HQHGPS Trigger: TGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGT...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAGAGCCAACATATTCTaGGGACACTGTGATGGTCTC | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYRANIF*GHCDGL Trigger: GAGACCATCACAGTGTCCCCAGAATATGTTGGCTCT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGACAGCATTGGCAACTaGCATTCCAAGATATGCCTC | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYDSIGN*HSKICL Trigger: GAGGCATATCTTGGAATGCCAGTTGCCAATGCTGTC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACATCCGAGGAATACGAGTaGAGCCCCCAACTAAAACCA | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETSEEYE*SPQLKP Trigger: TGGTTTTAGTTGGGGGCTCCACTCGTATTCCTCGGA...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACCAAAGAACTCTTGAATaGCTTGACGGATCCGAGGAA | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYQRTLE*LDGSEE Trigger: TTCCTCGGATCCGTCAAGTCATTCAAGAGTTCTTTG...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACACCATAGGCCATAGCTaGTGCTGTGGGTTCATTTAT | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYTIGHS*CCGFIY Trigger: ATAAATGAACCCACAGCAGCAGCTATGGCCTATGGT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATTCAGTCTTTTCCAGGTaGCCTTCTTTCAATACTTGC | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNSVFSR*PSFNTC Trigger: GCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGA...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACATAGGCCATAGCTGCTaGTGTGGGTTCATTTATTAC | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYIGHSC*CGFIYY Trigger: GTAATAAATGAACCCACAGCAGCAGCTATGGCCTAT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATCCTGTATCTAAATGTTaGCCTCTAGGTAAATCTGTG | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNPVSKC*PLGKSV Trigger: CACAGATTTACCTAGAGGGCAACATTTAGATACAGG...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAGTAGCTCAATTCCATaGTATATTCCCCAGGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYSSSIP*YIPQGL Trigger: TAAGCCCTGGGGAATATAGCATGGAATTGAGCTACT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAGGACATGAGATGAGCTaGCTGCCCTATTTTGTCAAT | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETGHEMS*LPYFVN Trigger: ATTGACAAAATAGGGCAGGCAGCTCATCTCATGTCC...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATAATATGCTCAACTACTaGCTCCAAATTCCAACACTG | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNNMLNY*LQIPTL Trigger: CAGTGTTGGAATTTGGAGGCAGTAGTTGAGCATATT...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGGTACCAGTATTTTCTaGAAGAGGTCTTCATTAAGG | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYGTSIF*KRSSLR Trigger: CCTTAATGAAGACCTCTTTCAGAAAATACTGGTACC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACACAACTCTGCTCCAAATaGCGATTTGTAGAAACCTTG | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETQLCSK*RFVETL Trigger: CAAGGTTTCTACAAATCGGCATTTGGAGCAGAGTTG...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGGAAAGTTTGTCTTTTaGCAGTTCAGTGTCACTACT | + |
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Preference number: 4 (lower is better) Translates to: QHFNILSNSAMDKAEILYGKFVF*QFSVTT Trigger: AGTAGTGACACTGAACTGCCAAAAGACAAACTTTCC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAGAGTCAGATTTAATTTaGCCATTTCCACAGCTTGTC | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETESDLI*PFPQLV Trigger: GACAAGCTGTGGAAATGGTCAAATTAAATCTGACTC...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAGTTAAGTCAGTGGTTTaGGTGAAAACACAGTACCAA | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETVKSVV*VKTQYQ Trigger: TTGGTACTGTGTTTTCACTCAAACCACTGACTTAAC...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR GCA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATAAAACTCCTGGAGAATaGAGATTACAAGAATATGAC | + |
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Preference number: 4 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNKTPGE*RLQEYD Trigger: GTCATATTCTTGTAATCTGCATTCTCCAGGAGTTTT...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAGGTCTACAGATGTGTTaGGATCTTTTCCAAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETGLQMC*DLFQRT Trigger: AGTTCTTTGGAAAAGATCCCAACACATCTGTAGACC...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR TCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACATCTTTCAATACTTGCTaGATGGGTACCAGTATTTTC | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETSFNTC*MGTSIF Trigger: GAAAATACTGGTACCCATTCAGCAAGTATTGAAAGA...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CCA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAAATGTTAAGTGCATATaGTTATCAACCTCCAGAATC | + |
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Preference number: 4 (lower is better) Translates to: LNSMLYSPGLTENINKETNVKCI*LSTSRI Trigger: GATTCTGGAGGTTGATAACCATATGCACTTAACATT...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 90 bp | TCCGTGAGGGCGCGGGGCAAAGAGCCTCCATTCAACCGCTGCCAGTaGCGACTGAGTCCCCCTTCCACGCAACGGCCGGCAGGACCAGTG | + |
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Preference number: 5 (lower is better) Translates to: SVRARGKEPPFNRCQ*RLSPPSTQRPAGPV Trigger: CACTGGTCCTGCCGGCCGTTGCGTGGAAGGGGGACTCAGTCGTCACTGGCAGCGGTTGAATGGAGGCTCTTTGCCCCGCGCCCTCACGGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478035.1 |
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| CDS CCA 90 bp | AAAGCACTGACTTGGAGAGGCCAAGAGCCTCCATCAATCCCTGCTTaGATAGCCACTCCCGTTACTACTGCTAGGTCAGGGTCTACAGAT | + |
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Preference number: 5 (lower is better) Translates to: KALTWRGQEPPSIPA*IATPVTTARSGSTD Trigger: ATCTGTAGACCCTGACCTAGCAGTAGTAACGGGAGTGGCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGTCAGTGCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 90 bp | AGAAAGGCCACGTCCAAACCCACTGTTCACGCGATGGTCATCTGCTaGGGAAAGTTTGTCTTTTGGCAGTTCAGTGTCACTACTGTGAGG | + |
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Preference number: 5 (lower is better) Translates to: RKATSKPTVHAMVIC*GKFVFWQFSVTTVR Trigger: CCTCACAGTAGTGACACTGAACTGCCAAAAGACAAACTTTCCTCAGCAGATGACCATCGCGTGAACAGTGGGTTTGGACGTGGCCTTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 90 bp | CAGGGTCTACAGATGTGTTGGGATCTTTTCCAAAGAACTCTTGAATaGCTTGACGGATCCGAGGAATACGAGTGGAGCCCCCAACTAAAA | + |
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Preference number: 5 (lower is better) Translates to: QGLQMCWDLFQRTLE*LDGSEEYEWSPQLK Trigger: TTTTAGTTGGGGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAGTTCTTTGGAAAAGATCCCAACACATCTGTAGACCCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATGAACTCTTGAATGACTaGACGGATCCGAGGAATACG | + |
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Preference number: 5 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNELLND*TDPRNT Trigger: CGTATTCCTCGGATCCGTCAAGTCATTCAAGAGTTC...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACATCCATCAATCCCTGCTaGGATAGCCACTCCCGTTAC | + |
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Preference number: 5 (lower is better) Translates to: LNSMLYSPGLTENINKETSINPC*DSHSRY Trigger: GTAACGGGAGTGGCTATCCAAGCAGGGATTGATGGA...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATGGGTCTACAGATGTGTaGGGATCTTTTCCAAAGAAC | + |
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Preference number: 5 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNGSTDV*GSFPKN Trigger: GTTCTTTGGAAAAGATCCCAACACATCTGTAGACCC...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATCGATTTGTAGAAACCTaGCCACAATGGCTTCCACAT | + |
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Preference number: 5 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNRFVET*PQWLPH Trigger: ATGTGGAAGCCATTGTGGCAAGGTTTCTACAAATCG...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | TCCAACCACTGTAAATACCTGACATCAACACGGTCCTTCAAGTATAGTTCAAATGCTGCCTGCCCTATTTaGTCAATTGTTTCCAAAAGC | + |
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Preference number: 5 (lower is better) Translates to: SNHCKYLTSTRSFKYSSNAACPI*SIVSKS Trigger: GCTTTTGGAAACAATTGACAAAATAGGGCAGGCAGC...ATTTGAACTATACTTGAAGGACCGTGTTGATGTCAGGTATTTACAGTGGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACAACAGAAATGACAGCATaGGCAACTGGCATTCCAAGA | + |
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Preference number: 5 (lower is better) Translates to: LNSMLYSPGLTENINKETTEMTA*ATGIPR Trigger: TCTTGGAATGCCAGTTGCCAATGCTGTCATTTCTGT...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAGGAAAGTTTGTCTTTaGGCAGTTCAGTGTCACTAC | + |
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Preference number: 5 (lower is better) Translates to: QHFNILSNSAMDKAEILYRKVCL*AVQCHY Trigger: GTAGTGACACTGAACTGCCAAAAGACAAACTTTCCT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGCCTTCTTTCAATACTaGCTGAATGGGTACCAGTAT | + |
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Preference number: 5 (lower is better) Translates to: QHFNILSNSAMDKAEILYAFFQY*LNGYQY Trigger: ATACTGGTACCCATTCAGCAAGTATTGAAAGAAGGC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACGCTATTTGCCAATGTTaGCAAAGGTCTCGGATAACA | + |
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Preference number: 5 (lower is better) Translates to: QHFNILSNSAMDKAEILYAICQC*QRSRIT Trigger: TGTTATCCGAGACCTTTGCAAACATTGGCAAATAGC...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 90 bp | ATGTTTGATAGATCTGTTTATATAAGTACTGAAGCAATCTCTGATTaGAGTCCTGTCCTCCAAGTTTATTGTTTCCAGACATTGCTCGGG | + |
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Preference number: 5 (lower is better) Translates to: MFDRSVYISTEAISD*SPVLQVYCFQTLLG Trigger: CCCGAGCAATGTCTGGAAACAATAAACTTGGAGGACAGGACTTCAATCAGAGATTGCTTCAGTACTTATATAAACAGATCTATCAAACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACTCTGCGGTAAAAATCTaGCCTATGAATCTTTTGGCA | + |
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Preference number: 5 (lower is better) Translates to: QHFNILSNSAMDKAEILYSAVKI*PMNLLA Trigger: TGCCAAAAGATTCATAGGCAAGATTTTTACCGCAGA...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACATATTGTTTCCAGACATaGCTCGGGTTAGAAACATCC | + |
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Preference number: 5 (lower is better) Translates to: LNSMLYSPGLTENINKETYCFQT*LGLETS Trigger: GGATGTTTCTAACCCGAGCAATGTCTGGAAACAATA...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACATTTTCCAAAGAACTCTaGAATGACTTGACGGATCCG | + |
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Preference number: 5 (lower is better) Translates to: LNSMLYSPGLTENINKETFSKEL*NDLTDP Trigger: CGGATCCGTCAAGTCATTCAAGAGTTCTTTGGAAAA...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CTCAATTCCATGCTATATTCCCCAGGGCTTACTGAAAATATAAACAAAGAAACACCCACATATACATCATaGTCAGTAAAAGACACCATG | + |
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Preference number: 5 (lower is better) Translates to: LNSMLYSPGLTENINKETPTYTS*SVKDTM Trigger: CATGGTGTCTTTTACTGACAATGATGTATATGTGGG...TGTTTCTTTGTTTATATTTTCAGTAAGCCCTGGGGAATATAGCATGGAATTGAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS-3UTR CAA 90 bp | CAGCATTTCAACATCCTATCGAATTCAGCAATGGATAAAGCAGAGATACTTTACAGAGTCAGATTTAATTaGACCATTTCCACAGCTTGT | + |
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Preference number: 5 (lower is better) Translates to: QHFNILSNSAMDKAEILYRVRFN*TISTAC Trigger: ACAAGCTGTGGAAATGGTCAAATTAAATCTGACTCT...GTAAAGTATCTCTGCTTTATCCATTGCTGAATTCGATAGGATGTTGAAATGCTG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 72 bp | GCGCGGGGCAAAGAGCCTCCATTCAACCGCTGCCAGTaGCGACTGAGTCCCCCTTCCACGCAACGGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: ARGKEPPFNRCQ*RLSPPSTQRPA Trigger: TGCCGGCCGTTGCGTGGAAGGGGGACTCAGTCGTCACTGGCAGCGGTTGAATGGAGGCTCTTTGCCCCGCGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000478035.1 |
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| CDS TCA 72 bp | GCAAAGAGCCTCCATTCAACCGCTGCCAGTGACGACTaGGTCCCCCTTCCACGCAACGGCCGGCAGGACCAG | + |
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Preference number: 6 (lower is better) Translates to: AKSLHSTAASDD*VPLPRNGRQDQ Trigger: CTGGTCCTGCCGGCCGTTGCGTGGAAGGGGGACTCAGTCGTCACTGGCAGCGGTTGAATGGAGGCTCTTTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000478035.1 |
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| CDS CCA 72 bp | ACTTGGAGAGGCCAAGAGCCTCCATCAATCCCTGCTTaGATAGCCACTCCCGTTACTACTGCTAGGTCAGGG | + |
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Preference number: 6 (lower is better) Translates to: TWRGQEPPSIPA*IATPVTTARSG Trigger: CCCTGACCTAGCAGTAGTAACGGGAGTGGCTATCCAAGCAGGGATTGATGGAGGCTCTTGGCCTCTCCAAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CCA 72 bp | TCAGAAAGGCCACGTCCAAACCCACTGTTCACGCGATaGTCATCTGCTGAGGAAAGTTTGTCTTTTGGCAGT | + |
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Preference number: 6 (lower is better) Translates to: SERPRPNPLFTR*SSAEESLSFGS Trigger: ACTGCCAAAAGACAAACTTTCCTCAGCAGATGACCATCGCGTGAACAGTGGGTTTGGACGTGGCCTTTCTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 72 bp | ACGTCCAAACCCACTGTTCACGCGATGGTCATCTGCTaGGGAAAGTTTGTCTTTTGGCAGTTCAGTGTCACT | + |
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Preference number: 6 (lower is better) Translates to: TSKPTVHAMVIC*GKFVFWQFSVT Trigger: AGTGACACTGAACTGCCAAAAGACAAACTTTCCTCAGCAGATGACCATCGCGTGAACAGTGGGTTTGGACGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 72 bp | CAGATGTGTTGGGATCTTTTCCAAAGAACTCTTGAATaGCTTGACGGATCCGAGGAATACGAGTGGAGCCCC | + |
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Preference number: 6 (lower is better) Translates to: QMCWDLFQRTLE*LDGSEEYEWSP Trigger: GGGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAGTTCTTTGGAAAAGATCCCAACACATCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CAA 72 bp | TGTGTTGGGATCTTTTCCAAAGAACTCTTGAATGACTaGACGGATCCGAGGAATACGAGTGGAGCCCCCAAC | + |
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Preference number: 6 (lower is better) Translates to: CVGIFSKELLND*TDPRNTSGAPN Trigger: GTTGGGGGCTCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAGTTCTTTGGAAAAGATCCCAACACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CAA 72 bp | GTCTACAGATGTGTTGGGATCTTTTCCAAAGAACTCTaGAATGACTTGACGGATCCGAGGAATACGAGTGGA | + |
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Preference number: 6 (lower is better) Translates to: VYRCVGIFSKEL*NDLTDPRNTSG Trigger: TCCACTCGTATTCCTCGGATCCGTCAAGTCATTCAAGAGTTCTTTGGAAAAGATCCCAACACATCTGTAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS TCA 72 bp | ACAATAGTCGAGAGCCAACATATTCTGGGGACACTGTaGTGGTCTCATTACTTGTCACAGAAAACTCAACCA | + |
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Preference number: 6 (lower is better) Translates to: TIVESQHILGTL*WSHYLSQKTQP Trigger: TGGTTGAGTTTTCTGTGACAAGTAATGAGACCATCACAGTGTCCCCAGAATATGTTGGCTCTCGACTATTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CAA 72 bp | GCCAGCTCTACGCTTTCATATCCCACATATACATCATaGTCAGTAAAAGACACCATGCTGGGTATGCTGATA | + |
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Preference number: 6 (lower is better) Translates to: ASSTLSYPTYTS*SVKDTMLGMLI Trigger: TATCAGCATACCCAGCATGGTGTCTTTTACTGACAATGATGTATATGTGGGATATGAAAGCGTAGAGCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285667.4 ENST00000478035.1 |
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| CDS GCA 72 bp | AAATGGGTATCTGCCAATTTCAGCCTCCAACTCTTCTaGGGTAAAAATCTTGCCTATGAATCTTTTGGCATC | + |
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Preference number: 6 (lower is better) Translates to: KWVSANFSLQLF*GKNLAYESFGI Trigger: GATGCCAAAAGATTCATAGGCAAGATTTTTACCGCAGAAGAGTTGGAGGCTGAAATTGGCAGATACCCATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285667.4 ENST00000478035.1 |
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| CDS CAA 72 bp | TTTAGATCAAATTCTGCTGGTACAGAAATGACAGCATaGGCAACTGGCATTCCAAGATATGCCTCTGCCATT | + |
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Preference number: 6 (lower is better) Translates to: FRSNSAGTEMTA*ATGIPRYASAI Trigger: AATGGCAGAGGCATATCTTGGAATGCCAGTTGCCAATGCTGTCATTTCTGTACCAGCAGAATTTGATCTAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CAA 72 bp | AATCTCAGTCTTTTCCAGGTGGCCTTCTTTCAATACTaGCTGAATGGGTACCAGTATTTTCTGAAAGAGGTC | + |
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Preference number: 6 (lower is better) Translates to: NLSLFQVAFFQY*LNGYQYFLKEV Trigger: GACCTCTTTCAGAAAATACTGGTACCCATTCAGCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGAGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CAA 90 bp | TTTGAATCTGCCAGCTCTACGCTTTCATATCCCACATATACATCATaGTCAGTAAAAGACACCATGCTGGGTATGCTGATATGCCCATTT | + |
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Preference number: 6 (lower is better) Translates to: FESASSTLSYPTYTS*SVKDTMLGMLICPF Trigger: AAATGGGCATATCAGCATACCCAGCATGGTGTCTTTTACTGACAATGATGTATATGTGGGATATGAAAGCGTAGAGCTGGCAGATTCAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000285667.4 ENST00000478035.1 |
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| CDS CAA 90 bp | CACCTCATCAATCTCAGTCTTTTCCAGGTGGCCTTCTTTCAATACTaGCTGAATGGGTACCAGTATTTTCTGAAAGAGGTCTTCATTAAG | + |
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Preference number: 6 (lower is better) Translates to: HLINLSLFQVAFFQY*LNGYQYFLKEVFIK Trigger: CTTAATGAAGACCTCTTTCAGAAAATACTGGTACCCATTCAGCAAGTATTGAAAGAAGGCCACCTGGAAAAGACTGAGATTGATGAGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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| CDS CAA 72 bp | CCAATTTCAGCCTCCAACTCTTCTGCGGTAAAAATCTaGCCTATGAATCTTTTGGCATCATATATTGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: PISASNSSAVKI*PMNLLASYIVF Trigger: AAACACAATATATGATGCCAAAAGATTCATAGGCAAGATTTTTACCGCAGAAGAGTTGGAGGCTGAAATTGG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000285667.4 ENST00000478035.1 |
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| CDS TCA 72 bp | AGATCTGTTTATATAAGTACTGAAGCAATCTCTGATTaGAGTCCTGTCCTCCAAGTTTATTGTTTCCAGACA | + |
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Preference number: 6 (lower is better) Translates to: RSVYISTEAISD*SPVLQVYCFQT Trigger: TGTCTGGAAACAATAAACTTGGAGGACAGGACTTCAATCAGAGATTGCTTCAGTACTTATATAAACAGATCT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000285667.4 |
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