Pregenerated sensors for HSP90AA1 (Homo sapiens)
Ensembl gene IDs: ENSG00000080824Ensembl transcript IDs: ENST00000334701.11, ENST00000554401.1, ENST00000555662.1, ENST00000557234.1, ENST00000558600.1, ENST00000560130.1
Found 27 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | AAAACATGCGAAAATGGGCTATGTATGACTAAGCTTGAAAGCACCTTAGAAGTAGATCTCCTGACCTTGTaGTCCGCTGCCTCAGCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KTCENGLCMTKLESTLEVDLLTL*SAASAS Trigger: GGAGGCTGAGGCAGCGGATCACAAGGTCAGGAGATC...TACTTCTAAGGTGCTTTCAAGCTTAGTCATACATAGCCCATTTTCGCATGTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554401.1 |
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| CDS-3UTR GCA 90 bp | AAAACATGCGAAAATGGGCTATGTATGACTAAGCTTGAAAGCACCTTAGAAGTATTCAGGCGATTCTCCTaGCTCAGCCTCCCAAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KTCENGLCMTKLESTLEVFRRFS*LSLPSG Trigger: GCCACTTGGGAGGCTGAGGCAGGAGAATCGCCTGAA...TACTTCTAAGGTGCTTTCAAGCTTAGTCATACATAGCCCATTTTCGCATGTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554401.1 |
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| CDS-3UTR TCA 90 bp | AAAACATGCGAAAATGGGCTATGTATGACTAAGCTTGAAAGCACCTTAGAAGTAATGGTCTCGATCTCCTaGCCTTGTGATCCGCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: KTCENGLCMTKLESTLEVMVSIS*PCDPLP Trigger: AGGCAGCGGATCACAAGGTCAGGAGATCGAGACCAT...TACTTCTAAGGTGCTTTCAAGCTTAGTCATACATAGCCCATTTTCGCATGTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000554401.1 |
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| CDS CCA 90 bp | CTTCCTGGGCGGGGATCCAGACGGTCGCGCGGGTATTCAGCACTCTaGGCGGGACAGTCCCTGTCCCGAAGGGAGGGCCCAGGAGGGGTG | + |
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Preference number: 5 (lower is better) Translates to: LPGRGSRRSRGYSAL*AGQSLSRREGPGGV Trigger: CACCCCTCCTGGGCCCTCCCTTCGGGACAGGGACTGTCCCGCCCAGAGTGCTGAATACCCGCGCGACCGTCTGGATCCCCGCCCAGGAAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENST00000334701.11 ENST00000557234.1 ENST00000558600.1 |
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| CDS TCA 90 bp | CGCTGGCCCTGGCGGCTGCGGAACGGTCAACTAGACCCCACTAGCTaGAGCCGGCATCACCTGGGAAGCAGCCATGCCGCCCGGAGGCCA | + |
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Preference number: 5 (lower is better) Translates to: RWPWRLRNGQLDPTS*SRHHLGSSHAARRP Trigger: TGGCCTCCGGGCGGCATGGCTGCTTCCCAGGTGATGCCGGCTTCAGCTAGTGGGGTCTAGTTGACCGTTCCGCAGCCGCCAGGGCCAGCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334701.11 ENST00000558600.1 |
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| CDS CCA 90 bp | CCTGCTTCTCAGAAACGGCGGCGAGGAGGCTTCAGAGGGGCTTCCTaGGCGGGGATCCAGACGGTCGCGCGGGTATTCAGCACTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: PASQKRRRGGFRGAS*AGIQTVARVFSTLG Trigger: GCCCAGAGTGCTGAATACCCGCGCGACCGTCTGGATCCCCGCCCAGGAAGCCCCTCTGAAGCCTCCTCGCCGCCGTTTCTGAGAAGCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000334701.11 |
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| CDS CCA 90 bp | TGCCCTTCTCAGAAACGGCGGCGAGGAGGCTTCAGAGGGGCTTCCTaGGCGGGGATCCAGACGGTCGCGCGGGTATTCAGCACTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: CPSQKRRRGGFRGAS*AGIQTVARVFSTLG Trigger: GCCCAGAGTGCTGAATACCCGCGCGACCGTCTGGATCCCCGCCCAGGAAGCCCCTCTGAAGCCTCCTCGCCGCCGTTTCTGAGAAGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000558600.1 |
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| CDS CCA 90 bp | GCATCTTCTCAGAAACGGCGGCGAGGAGGCTTCAGAGGGGCTTCCTaGGCGGGGATCCAGACGGTCGCGCGGGTATTCAGCACTCTGGGC | + |
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Preference number: 5 (lower is better) Translates to: ASSQKRRRGGFRGAS*AGIQTVARVFSTLG Trigger: GCCCAGAGTGCTGAATACCCGCGCGACCGTCTGGATCCCCGCCCAGGAAGCCCCTCTGAAGCCTCCTCGCCGCCGTTTCTGAGAAGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000557234.1 |
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| CDS CCA 90 bp | GTTTGCCGTTACTACAGATGCAAAGGCCACCACAGCAGAACCTTTTaGGCAAGGTGCCTCGCCCAAAAGAACCGCCCACCAAGTCATGCC | + |
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Preference number: 5 (lower is better) Translates to: VCRYYRCKGHHSRTF*ARCLAQKNRPPSHA Trigger: GGCATGACTTGGTGGGCGGTTCTTTTGGGCGAGGCACCTTGCCCAAAAGGTTCTGCTGTGGTGGCCTTTGCATCTGTAGTAACGGCAAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555662.1 |
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| CDS GCA 90 bp | TACTACAGATGCAAAGGCCACCACAGCAGAACCTTTTGGGCAAGGTaGCTCGCCCAAAAGAACCGCCCACCAAGTCATGCCATTACACTA | + |
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Preference number: 5 (lower is better) Translates to: YYRCKGHHSRTFWAR*LAQKNRPPSHAITL Trigger: TAGTGTAATGGCATGACTTGGTGGGCGGTTCTTTTGGGCGAGGCACCTTGCCCAAAAGGTTCTGCTGTGGTGGCCTTTGCATCTGTAGTA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555662.1 |
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| CDS CCA 90 bp | ATGCAGAGACGTGGAAGGGCTGTTTCCAGAGACAGAGTAGAGTGGTaGATCCAGACACCATCAGATGCCAGAGAAACACTTGGGCCTTTT | + |
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Preference number: 5 (lower is better) Translates to: MQRRGRAVSRDRVEW*IQTPSDARETLGPF Trigger: AAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCCACCACTCTACTCTGTCTCTGGAAACAGCCCTTCCACGTCTCTGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000334701.11 ENST00000558600.1 |
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| CDS CCA 90 bp | AGTAGAGTGGTGGATCCAGACACCATCAGATGCCAGAGAAACACTTaGGCCTTTTCTTGGTACCAGTTAACAGGTGCCCTGCTTCTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SRVVDPDTIRCQRNT*AFSWYQLTGALLLR Trigger: TCTGAGAAGCAGGGCACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCCACCACTCTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334701.11 |
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| CDS CCA 90 bp | AGTAGAGTGGTGGATCCAGACACCATCAGATGCCAGAGAAACACTTaGGCCTTTTCTTGGTACCAGTTAACAGGTGCCCTTCTCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: SRVVDPDTIRCQRNT*AFSWYQLTGALLRN Trigger: GTTTCTGAGAAGGGCACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCCACCACTCTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558600.1 |
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| CDS GCA 90 bp | TGTTTCCAGAGACAGAGTAGAGTGGTGGATCCAGACACCATCAGATaGCAGAGAAACACTTGGGCCTTTTCTTGGTACCAGTTAACAGGT | + |
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Preference number: 5 (lower is better) Translates to: CFQRQSRVVDPDTIR*QRNTWAFSWYQLTG Trigger: ACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCCACCACTCTACTCTGTCTCTGGAAACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334701.11 ENST00000558600.1 |
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| CDS CCA 72 bp | CGGGGATCCAGACGGTCGCGCGGGTATTCAGCACTCTaGGCGGGACAGTCCCTGTCCCGAAGGGAGGGCCCA | + |
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Preference number: 6 (lower is better) Translates to: RGSRRSRGYSAL*AGQSLSRREGP Trigger: TGGGCCCTCCCTTCGGGACAGGGACTGTCCCGCCCAGAGTGCTGAATACCCGCGCGACCGTCTGGATCCCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENST00000334701.11 ENST00000557234.1 ENST00000558600.1 |
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| CDS TCA 72 bp | TGGCGGCTGCGGAACGGTCAACTAGACCCCACTAGCTaGAGCCGGCATCACCTGGGAAGCAGCCATGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: WRLRNGQLDPTS*SRHHLGSSHAA Trigger: GGCGGCATGGCTGCTTCCCAGGTGATGCCGGCTTCAGCTAGTGGGGTCTAGTTGACCGTTCCGCAGCCGCCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334701.11 ENST00000558600.1 |
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| CDS TCA 72 bp | GTGTTGCCCTGCACCTTGGCTCTGTCTGAAGGCCAGTaGCGCGGTGACAGGGAATGCAGAGACGTGGAAGGG | + |
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Preference number: 6 (lower is better) Translates to: VLPCTLALSEGQ*RGDRECRDVEG Trigger: CCCTTCCACGTCTCTGCATTCCCTGTCACCGCGTCACTGGCCTTCAGACAGAGCCAAGGTGCAGGGCAACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000334701.11 |
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| CDS CAA 90 bp | GGTTTGCCGTTACTACAGATGCAAAGGCCACCACAGCAGAACCTTTaGGGCAAGGTGCCTCGCCCAAAAGAACCGCCCACCAAGTCATGC | + |
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Preference number: 6 (lower is better) Translates to: GLPLLQMQRPPQQNL*GKVPRPKEPPTKSC Trigger: GCATGACTTGGTGGGCGGTTCTTTTGGGCGAGGCACCTTGCCCAAAAGGTTCTGCTGTGGTGGCCTTTGCATCTGTAGTAACGGCAAACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555662.1 |
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| CDS CCA 72 bp | TACTACAGATGCAAAGGCCACCACAGCAGAACCTTTTaGGCAAGGTGCCTCGCCCAAAAGAACCGCCCACCA | + |
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Preference number: 6 (lower is better) Translates to: YYRCKGHHSRTF*ARCLAQKNRPP Trigger: TGGTGGGCGGTTCTTTTGGGCGAGGCACCTTGCCCAAAAGGTTCTGCTGTGGTGGCCTTTGCATCTGTAGTA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000555662.1 |
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| CDS CAA 72 bp | TTACTACAGATGCAAAGGCCACCACAGCAGAACCTTTaGGGCAAGGTGCCTCGCCCAAAAGAACCGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: LLQMQRPPQQNL*GKVPRPKEPPT Trigger: GGTGGGCGGTTCTTTTGGGCGAGGCACCTTGCCCAAAAGGTTCTGCTGTGGTGGCCTTTGCATCTGTAGTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000555662.1 |
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| CDS CAA 90 bp | GGATCCAGACACCATCAGATGCCAGAGAAACACTTGGGCCTTTTCTaGGTACCAGTTAACAGGTGCCCTGCTTCTCAGAAACGGCGGCGA | + |
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Preference number: 6 (lower is better) Translates to: GSRHHQMPEKHLGLF*VPVNRCPASQKRRR Trigger: TCGCCGCCGTTTCTGAGAAGCAGGGCACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334701.11 |
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| CDS CAA 90 bp | GGATCCAGACACCATCAGATGCCAGAGAAACACTTGGGCCTTTTCTaGGTACCAGTTAACAGGTGCCCTTCTCAGAAACGGCGGCGAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSRHHQMPEKHLGLF*VPVNRCPSQKRRRG Trigger: TCCTCGCCGCCGTTTCTGAGAAGGGCACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558600.1 |
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| CDS GCA 72 bp | AGACAGAGTAGAGTGGTGGATCCAGACACCATCAGATaGCAGAGAAACACTTGGGCCTTTTCTTGGTACCAG | + |
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Preference number: 6 (lower is better) Translates to: RQSRVVDPDTIR*QRNTWAFSWYQ Trigger: CTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTGTCTGGATCCACCACTCTACTCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000334701.11 ENST00000558600.1 |
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| CDS CAA 72 bp | CACCATCAGATGCCAGAGAAACACTTGGGCCTTTTCTaGGTACCAGTTAACAGGTGCCCTTCTCAGAAACGG | + |
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Preference number: 6 (lower is better) Translates to: HHQMPEKHLGLF*VPVNRCPSQKR Trigger: CCGTTTCTGAGAAGGGCACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000558600.1 |
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| CDS CAA 72 bp | CACCATCAGATGCCAGAGAAACACTTGGGCCTTTTCTaGGTACCAGTTAACAGGTGCCCTGCTTCTCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: HHQMPEKHLGLF*VPVNRCPASQK Trigger: TTTCTGAGAAGCAGGGCACCTGTTAACTGGTACCAAGAAAAGGCCCAAGTGTTTCTCTGGCATCTGATGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000334701.11 |
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| CDS GCA 72 bp | AACCGCCCACCAAGTCATGCCATTACACTAATTAAGTaGTCTAGCTTGTTCCTGATCGTTGGGCAAACACAA | + |
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Preference number: 6 (lower is better) Translates to: NRPPSHAITLIK*SSLFLIVGQTQ Trigger: TTGTGTTTGCCCAACGATCAGGAACAAGCTAGAGCACTTAATTAGTGTAATGGCATGACTTGGTGGGCGGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000555662.1 |
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| CDS CAA 90 bp | AAGATATTTGGGGTGGTGGAGAAAGATGATAATCTAAGGACAAGCTaGAAGCACCCATCAGTCACTCACCTTCACTGCCAAGTGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: KIFGVVEKDDNLRTS*KHPSVTHLHCQVIF Trigger: GAAGATCACTTGGCAGTGAAGGTGAGTGACTGATGGGTGCTTCAAGCTTGTCCTTAGATTATCATCTTTCTCCACCACCCCAAATATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000560130.1 |
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