RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSH2D (Homo sapiens)

Ensembl gene IDs: ENSG00000196684

Ensembl transcript IDs: ENST00000535834.1, ENST00000586872.5, ENST00000591154.1, ENST00000593031.1, ENST00000613195.4, ENST00000613986.4, ENST00000616070.4, ENST00000616645.4

Found 621 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGGGCGTCCAGCGAGGTGTGGGCCACC +
Preference number: 1 (lower is better)
Translates to: LQGCVSSSLRGSIGF*WWKVTRASSEVWAT
Trigger: GGTGGCCCACACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp GGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCCAGCGAGGTGTGGGCCACCTTCTCC +
Preference number: 1 (lower is better)
Translates to: GCVSSSLRGSIGFCW*KVTRASSEVWATFS
Trigger: GGAGAAGGTGGCCCACACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCGTCCAGCGAGGTGTGGGCCACCTTC +
Preference number: 1 (lower is better)
Translates to: QGCVSSSLRGSIGFC*WKVTRASSEVWATF
Trigger: GAAGGTGGCCCACACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR GCA 90 bp GGCCTCCTCAGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGG +
Preference number: 1 (lower is better)
Translates to: GLLRGRHRAGSFLGH*VGVEEEILVIHVCG
Trigger: CCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp ATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTaGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGTTG +
Preference number: 1 (lower is better)
Translates to: IQECGSPWQRVPEPG*TCSLAVPRGKGWRL
Trigger: CAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR GCA 90 bp CGTCTCCTCAGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGG +
Preference number: 1 (lower is better)
Translates to: RLLRGRHRAGSFLGH*VGVEEEILVIHVCG
Trigger: CCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGACG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591154.1
3UTR CCA 90 bp TGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCCCTaGTGCTCTGGCTTGGACTCCTGGGAGGATAGGGCTCTCACTACC +
Preference number: 1 (lower is better)
Translates to: WYSSGSWSFSGSAKP*CSGLDSWEDRALTT
Trigger: GGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp GAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTaGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTC +
Preference number: 1 (lower is better)
Translates to: EPGWTCSLAVPRGKG*RLLVLLRELVVLRL
Trigger: GAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR GCA 90 bp GGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATaGAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTAC +
Preference number: 1 (lower is better)
Translates to: GPAASLLQPDYPRFP*RLLHSLAMQHPAGY
Trigger: GTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR GCA 90 bp TACCTCCTCAGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGG +
Preference number: 1 (lower is better)
Translates to: YLLRGRHRAGSFLGH*VGVEEEILVIHVCG
Trigger: CCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR GCA 90 bp AAGCTGTTGACCACCTCCACTCCTGCCCCTCAGCCAGGTGGGAGGTaGCAGCCTCCTGTCATATACATACCTCCTCAGGGGCAGACACCG +
Preference number: 1 (lower is better)
Translates to: KLLTTSTPAPQPGGR*QPPVIYIPPQGQTP
Trigger: CGGTGTCTGCCCCTGAGGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGGGCAGGAGTGGAGGTGGTCAACAGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR CCA 90 bp CCTCAGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCT +
Preference number: 1 (lower is better)
Translates to: PQGQTPGRQLPRPLR*SRGRDPRNPRLRDP
Trigger: AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp GTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTaGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCCCC +
Preference number: 1 (lower is better)
Translates to: VPSSKSFTMKWQQLL*ALRRHCGGWDILLP
Trigger: GGGGAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 90 bp CCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTC +
Preference number: 1 (lower is better)
Translates to: PWCGAMEEMLRHSGV*QPLAASPRARVDLF
Trigger: GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR CCA 90 bp GATCTCCGGACATCCAAGAGTGACGACAAGTTCACAGTGGCGAGGTaGCTTTTTAGCTGCTGCCGGACCCTCTGGCCTCTCTCGGGGAGC +
Preference number: 1 (lower is better)
Translates to: DLRTSKSDDKFTVAR*LFSCCRTLWPLSGS
Trigger: GCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR GCA 90 bp TCTGGCTTGGACTCCTGGGAGGATAGGGCTCTCACTACCATTTGGTaGCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCTGACCGAC +
Preference number: 1 (lower is better)
Translates to: SGLDSWEDRALTTIW*QLLSPGVTSMQLTD
Trigger: GTCGGTCAGCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp CCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCTCTGCGGAGACACTGCGGGGGCTGG +
Preference number: 1 (lower is better)
Translates to: PGIMKVPSSKSFTMK*QQLLWALRRHCGGW
Trigger: CCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 90 bp TGCTCTGGCTTGGACTCCTGGGAGGATAGGGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCTGACC +
Preference number: 1 (lower is better)
Translates to: CSGLDSWEDRALTTI*CQLLSPGVTSMQLT
Trigger: GGTCAGCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGAGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp CACCAAGCTGTAGGATCGCATTCTCATTCTAGAAGGAGCCTCCTCTaGAAGCTGTTGACCACCTCCACTCCTGCCCCTCAGCCAGGTGGG +
Preference number: 1 (lower is better)
Translates to: HQAVGSHSHSRRSLL*KLLTTSTPAPQPGG
Trigger: CCCACCTGGCTGAGGGGCAGGAGTGGAGGTGGTCAACAGCTTCCAGAGGAGGCTCCTTCTAGAATGAGAATGCGATCCTACAGCTTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR CCA 90 bp TACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTaGCCATGCAACACCCAGCAGGTTACTAACCTCGCTGTGCCTCAG +
Preference number: 1 (lower is better)
Translates to: YSQTTPGSHAGFFTH*PCNTQQVTNLAVPQ
Trigger: CTGAGGCACAGCGAGGTTAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 90 bp AGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTaGATCTCCGGACATCCAAGAGTGACGACAAGTTCACAGTGGCGA +
Preference number: 1 (lower is better)
Translates to: SDLGCLFRSQGLRSP*ISGHPRVTTSSQWR
Trigger: TCGCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 90 bp TTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCC +
Preference number: 1 (lower is better)
Translates to: LFHFPGSRRPPDAMV*GHGRNVKAFRSVAA
Trigger: GGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR GCA 90 bp TTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTACTGCTaGTTTCTGAGAAGCTATGACATGAAGCACCCCTTGCCCCCTCCA +
Preference number: 1 (lower is better)
Translates to: LASSSRSQIHSLSYC*FLRSYDMKHPLPPP
Trigger: TGGAGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR GCA 90 bp TGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTACTaGTGCTTTCTGAGAAGCTATGACATGAAGCACCCCTTGCCCCCT +
Preference number: 1 (lower is better)
Translates to: CLASSSRSQIHSLSY*CFLRSYDMKHPLPP
Trigger: AGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR TCA 90 bp TTCTCAGATCCACAGCCTCAGTTACTGCTGCTTTCTGAGAAGCTATaGCATGAAGCACCCCTTGCCCCCTCCAAGGAAACCCAAGAGCCC +
Preference number: 1 (lower is better)
Translates to: FSDPQPQLLLLSEKL*HEAPLAPSKETQEP
Trigger: GGGCTCTTGGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTGGATCTGAGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 90 bp CATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGG +
Preference number: 1 (lower is better)
Translates to: HLYSISRVPEDPRMP*CGAMEEMLRHSGVW
Trigger: CCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR CCA 90 bp GGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTaGCCTTGGTCACGCCTCTTATCCTCTCTGAACCTCAGTCTCTTC +
Preference number: 1 (lower is better)
Translates to: GFTWLQILVLTPIAL*PWSRLLSSLNLSLF
Trigger: GAAGAGACTGAGGTTCAGAGAGGATAAGAGGCGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR TCA 90 bp CACATGGCTGTGACTGACCCTGATGAGAAAGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGCATCCCTGTATGCTCAGATGCATTC +
Preference number: 1 (lower is better)
Translates to: HMAVTDPDEKGSQWL*LQQVLSIPVCSDAF
Trigger: GAATGCATCTGAGCATACAGGGATGCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCCTTTCTCATCAGGGTCAGTCACAGCCATGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR GCA 90 bp TGGCCTCAGATAAAACATGCCACTACGGACAAAAGCTTCACTCATTaGTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTAC +
Preference number: 1 (lower is better)
Translates to: WPQIKHATTDKSFTH*LASSSRSQIHSLSY
Trigger: GTAACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 90 bp ACAACAGAACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTaGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGG +
Preference number: 1 (lower is better)
Translates to: TTEQTDDMGKGLGFT*LQILVLTPIALWPW
Trigger: CCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTTCTGTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR TCA 90 bp CTGAGCCCGGCTTGCAGTGTGCTTTTAGACAACAGAACAAACAGATaGTATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGT +
Preference number: 1 (lower is better)
Translates to: LSPACSVLLDNRTNR*YGKRARIHLASNPG
Trigger: ACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTTCTGTTGTCTAAAAGCACACTGCAAGCCGGGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR GCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR TCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 2 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGCAAGTCCCCAGCCCTTaGGCCGGCAGCGTCACTGCT +
Preference number: 2 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKQVPSP*AGSVTA
Trigger: AGCAGTGACGCTGCCGGCCCAAGGGCTGGGGACTTG...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp CCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCTCTGCCAAGCCCTaGTGCTCTGGCTTGGACTCC +
Preference number: 2 (lower is better)
Translates to: PWQRVPEPGWTCSLAVPRGSAKP*CSGLDS
Trigger: GGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCC...CCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCAGGCTGGACTGCAGTaGTGCGATCTCGGCTCACTG +
Preference number: 2 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKQAGLQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCATCACTGCAGTCCAGCCTG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR TCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGTCCGGTCCCAGGGCCTaGGATCACCGTGGATCTCCG +
Preference number: 2 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWSGPRA*DHRGSP
Trigger: CGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGA...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGATCACCTCAATGCAGCTaGCCGACCTCTCGGCCTTCC +
Preference number: 2 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGSPQCS*PTSRPS
Trigger: GGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGA...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGATCTGCCAAGCCCTGGTaGTCTGGCTTGGACTCCTGG +
Preference number: 2 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGSAKPW*SGLDSW
Trigger: CCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGA...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGCAGCAGCTGCTTTaGGCTCTGCGGAGACACTGC +
Preference number: 2 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWWQQLL*ALRRHC
Trigger: GCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCA...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp GAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGTTGACACAGGACTGGCTTTaGGGAGGCCTCCTCAGGGGC +
Preference number: 2 (lower is better)
Translates to: EPGWTCSLAVPRGKGWRLTQDWL*GGLLRG
Trigger: GCCCCTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGT...CAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCTGGTCTCGAACTCCTaGCCTCAAGCGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKLVSNS*PQAICL
Trigger: CAGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR GCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGTTGCGGGATCCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKLRDPA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGGATCCCGCAA...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591154.1
ENST00000613195.4
3UTR-3UTR GCA 90 bp GCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCCCTTTGCGGGATCCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 2 (lower is better)
Translates to: AVVGTPPGAGRSQALPSPLRDPA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGGATCCCGCAA...AGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613195.4
3UTR-3UTR GCA 90 bp AGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGATCTCCCCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: SDLGCLFRSQGLRSPWISPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...GGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 2 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp CCCCTGAGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGAAGGGTGGCGGTTGTTaGTACTCCTCCGGGAGCTGG +
Preference number: 2 (lower is better)
Translates to: PLSDLGCLFRSQGLRSPWKGGGC*YSSGSW
Trigger: CCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTT...CCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CAA 90 bp TGGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGTTGTaGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCC +
Preference number: 2 (lower is better)
Translates to: WTCSLAVPRGKGWRL*VLLRELVVLRLCQA
Trigger: GGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CAA 90 bp GGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAA +
Preference number: 2 (lower is better)
Translates to: GWTCSLAVPRGKGWR*LVLLRELVVLRLCQ
Trigger: TTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp CCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGCCGGACATCCAAGAGTaGCGACAAGTTCACAGTGGC +
Preference number: 2 (lower is better)
Translates to: PWQRVPEPGWTCSLAVPRPDIQE*RQVHSG
Trigger: GCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGG...CCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGGGCTTCTTCACTCACTaGCCATGCAACACCCAGCAG +
Preference number: 2 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWGFFTH*PCNTQQ
Trigger: CTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCC...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp CCCCTGAGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGCTCTGTCCCCCGAGGTaGGATCCCCTGAGTGATCTT +
Preference number: 2 (lower is better)
Translates to: PLSDLGCLFRSQGLRSPWLCPPR*DPLSDL
Trigger: AAGATCACTCAGGGGATCCCACCTCGGGGGACAGAG...CCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGTACTCCTCCGGGAGCTaGTCGTTCTCAGGCTCTGCC +
Preference number: 2 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWYSSGS*SFSGSA
Trigger: GGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTA...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 2 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGCGGCTTCCTTTCCTTTaGTTGGTGACACAGGACTGG +
Preference number: 2 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWRLPFL*LVTQDW
Trigger: CCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCG...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp CTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGATCTCCGGACATCCAAGGTGGGATCCCCTGAGTaGTCTTGGCTGCCTTTTCCG +
Preference number: 2 (lower is better)
Translates to: LPFPVPGPEITVDLRTSKVGSPE*SWLPFP
Trigger: CGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCAC...CTTGGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp ATATACATACCTCCTCAGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTGGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: IYIPPQGQTPGRQLPRPLVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...CAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGTATGTATAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR GCA 90 bp CTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGATCTCCGGACATCCAAGTGGCTTTTTAGCTGCTaGCGGACCCTCTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: LPFPVPGPEITVDLRTSKWLFSC*RTLWPL
Trigger: GAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCA...CTTGGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAGGTGGCTTTTTAGCTaGTGCCGGACCCTCTGGCCT +
Preference number: 2 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVRWLFS*CRTLWP
Trigger: AGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCT...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 2 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp GCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCCCTGGGGGCAGGAGGAAGTaGCTTCCTTGGTGGTTATTC +
Preference number: 2 (lower is better)
Translates to: AVVGTPPGAGRSQALPSPGGRRK*LPWWLF
Trigger: GAATAACCACCAAGGAAGCCACTTCCTCCTGCCCCC...AGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CAA 90 bp AGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTaGGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCCC +
Preference number: 2 (lower is better)
Translates to: SPIIQELHHEMAAAA*GSAETLRGLGHPTP
Trigger: GGGAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CAA 90 bp GTAGGATCGCATTCTCATTCTAGAAGGAGCCTCCTCTGGAAGCTGTaGACCACCTCCACTCCTGCCCCTCAGCCAGGTGGGAGGTGCCAG +
Preference number: 2 (lower is better)
Translates to: VGSHSHSRRSLLWKL*TTSTPAPQPGGRCQ
Trigger: CTGGCACCTCCCACCTGGCTGAGGGGCAGGAGTGGAGGTGGTCAACAGCTTCCAGAGGAGGCTCCTTCTAGAATGAGAATGCGATCCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR TCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGCTTTCTGAGAAGCTATaGCATGAAGCACCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWLSEKL*HEAPLA
Trigger: GGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAG...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR TCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTTCTCGGGGAGCATTTTaGGGCTCCTCCAGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSSRGAF*GSSRVS
Trigger: AGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGA...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 2 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp CCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGCTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: PEPGWTCSLAVPRGKGWRLMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...CCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CCCCTCAGCCAGGTGGGAGGTGCCAGCCTCCTGTCATATACATACCTCCTCAGGCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 2 (lower is better)
Translates to: PLSQVGGASLLSYTYLLRPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...CCTGAGGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR CCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: HLASNPGADTHSSVALVTRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: HLASNPGADTHSSVALVTDPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp GCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCCCTTCTCGGCCTTCCTGGTaGGGACCTTTCTGTCTTTTG +
Preference number: 2 (lower is better)
Translates to: AVVGTPPGAGRSQALPSPSRPSW*GPFCLL
Trigger: CAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGA...AGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CCCCTGAGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: PLSDLGCLFRSQGLRSPWALTTI*CQLLSP
Trigger: AGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGC...CCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp GGGGTCACCTCAATGCAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCT +
Preference number: 2 (lower is better)
Translates to: GVTSMQLTDLSAFLVGTFALTTI*CQLLSP
Trigger: AGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGC...AAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCCCCAGGGGCAAAGGGTaGCGGTTGTTGGTACTCCTC +
Preference number: 2 (lower is better)
Translates to: LSLPFGANSCPLGSPQCSPRGKG*RLLVLL
Trigger: GAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGG...GCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAAGCTCACCCCATGGGTaGGTGCAGGAACAGACCCCA +
Preference number: 2 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLASSPHG*VQEQTP
Trigger: TGGGGTCTGTTCCTGCACTCACCCATGGGGTGAGCT...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR TCA 90 bp CCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTAGCTCACCCCATGGGTaGGTGCAGGAACAGACCCCA +
Preference number: 2 (lower is better)
Translates to: PPDAMVWGHGRNVKAFRSSSPHG*VQEQTP
Trigger: TGGGGTCTGTTCCTGCACTCACCCATGGGGTGAGCT...ACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR TCA 90 bp TTTGGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCCCCCTCATCCGCCTCTTATCCTCTCTaGACCTCAGTCTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: FGLCGDTAGAGTSYSPSSASYPL*TSVSSS
Trigger: TGAAGAAGAGACTGAGGTTCAGAGAGGATAAGAGGC...GGATGAGGGGGAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR TCA 90 bp AGGGCTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCGAGGTGGGATCCCCTaGGTGATCTTGGCTGCCTTT +
Preference number: 2 (lower is better)
Translates to: RALTTIWCQLLSPGVTSMRGGIP*VILAAF
Trigger: AAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCG...CATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTCCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLADPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR TCA 90 bp CCCTCAGCCAGGTGGGAGGTGCCAGCCTCCTGTCATATACATACCTCCTCAGGGCTTTCTGAGAAGCTATaGCATGAAGCACCCCTTGCC +
Preference number: 2 (lower is better)
Translates to: PSARWEVPASCHIHTSSGLSEKL*HEAPLA
Trigger: GGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAG...CCCTGAGGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR GCA 90 bp GTCCCCAGCCCTTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTGCCTCAGATAAAACATaGCACTACGGACAAAAGCTT +
Preference number: 2 (lower is better)
Translates to: VPSPWAGSVTATARLPQVASDKT*HYGQKL
Trigger: AAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGC...AACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAAGGGCTGGGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR GCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGACCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 2 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR GCA 90 bp AGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGATCTCCCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 2 (lower is better)
Translates to: SDLGCLFRSQGLRSPWISHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...GGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp GTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTAGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 2 (lower is better)
Translates to: VPMQASSLTGHATPSRLLDPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...TAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR CCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCTCTTCTTCAAAACATaGAGGATGACCCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSLFFKT*RMTLPE
Trigger: CTCAGGGAGGGTCATCCTCCATGTTTTGAAGAAGAG...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp GCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACAGCTTCACTCATTGCTTaGCTAGCAGCTCCCGTTCTC +
Preference number: 2 (lower is better)
Translates to: ARLPQVPMQASSLTGHATASLIA*LAAPVL
Trigger: GAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGC...TGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp CCCTCAGCCAGGTGGGAGGTGCCAGCCTCCTGTCATATACATACCTCCTCAGGGCAGGAGTACAAAGGCTaGCCTCAGATAAAACATGCC +
Preference number: 2 (lower is better)
Translates to: PSARWEVPASCHIHTSSGQEYKG*PQIKHA
Trigger: GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTG...CCCTGAGGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR GCA 90 bp ATATACATACCTCCTCAGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTGAGCCTCAGTTACTGCTaGTTTCTGAGAAGCTATGAC +
Preference number: 2 (lower is better)
Translates to: IYIPPQGQTPGRQLPRPLSLSYC*FLRSYD
Trigger: GTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCT...CAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCTGAGGAGGTATGTATAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR GCA 90 bp CCCCTCAGCCAGGTGGGAGGTGCCAGCCTCCTGTCATATACATACCTCCTCAGGTTACTAACCTCGCTGTaGCTCAGTTTCCCCCATTTA +
Preference number: 2 (lower is better)
Translates to: PLSQVGGASLLSYTYLLRLLTSL*LSFPHL
Trigger: TAAATGGGGGAAACTGAGGCACAGCGAGGTTAGTAA...CCTGAGGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR-3UTR GCA 90 bp CCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTGCGTACCCCAGGTTCCCATaGAGGCTTCTTCACTCACTG +
Preference number: 2 (lower is better)
Translates to: PIIQELHHEMAAAALGSAYPRFP*RLLHSL
Trigger: CAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTA...CGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR GCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 2 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR GCA 90 bp TCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTGCGGAGACACCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 2 (lower is better)
Translates to: SKSFTMKWQQLLWALRRHHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...GTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR GCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCTCAAGCGATCTGCCTaGCTCGGCCCCACAGAGTGC +
Preference number: 2 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDLKRSA*LGPTEC
Trigger: GCACTCTGTGGGGCCGAGGCAGGCAGATCGCTTGAG...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR TCA 90 bp GCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGCCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 2 (lower is better)
Translates to: ATFSPGIMKVPSSKSFTMPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...CATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR GCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCCTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPLMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 2 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSSIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp AGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: SAGTDPKNIFIPFPGFPKRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...CTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp CATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 2 (lower is better)
Translates to: HESPIIQELHHEMAAAALRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...CAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR CCA 90 bp CTCTGGCCTCTCTCGGGGAGCATTTTGAGGCTCCTCCAGAGTTTCTGGCGGGTCAGGAAGTGGCTTCCTTaGTGGTTATTCTGTTCATCT +
Preference number: 2 (lower is better)
Translates to: LWPLSGSILRLLQSFWRVRKWLP*WLFCSS
Trigger: AGATGAACAGAATAACCACCAAGGAAGCCACTTCCT...GACCCGCCAGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAGAGGCCAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 2 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR TCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAACTGGTCTCGAACTCCTaGCCTCAAGCGATCTGCCTG +
Preference number: 2 (lower is better)
Translates to: ECRNRPQKHLYSISRVPELVSNS*PQAICL
Trigger: CAGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAG...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR GCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAAAAAGCTTCACTCATTaGTTGGCTAGCAGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAKSFTH*LASSSR
Trigger: ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTT...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR GCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 2 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR GCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACTGGCTTTTTAGCTGCTaGCGGACCCTCTGGCCTCTC +
Preference number: 2 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDWLFSC*RTLWPL
Trigger: GAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCA...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTCCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTT +
Preference number: 2 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSPDAMV*GHGRNV
Trigger: AACATTTCTTCCATGGCCCCACACCATGGCATCCGG...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR CCA 90 bp AGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGATCTCCAGGAAGTGGCTTCCTTaGTGGTTATTCTGTTCATCT +
Preference number: 2 (lower is better)
Translates to: SDLGCLFRSQGLRSPWISRKWLP*WLFCSS
Trigger: AGATGAACAGAATAACCACCAAGGAAGCCACTTCCT...GGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTGCCTCTTATCCTCTCTaGACCTCAGTCTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPASYPL*TSVSSS
Trigger: TGAAGAAGAGACTGAGGTTCAGAGAGGATAAGAGGC...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR TCA 90 bp ACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATCTCGGGGAGCATTTTaGGGCTCCTCCAGAGTTTCT +
Preference number: 2 (lower is better)
Translates to: TFSPGIMKVPSSKSFTMKSRGAF*GSSRVS
Trigger: AGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGA...TTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR GCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATCTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 2 (lower is better)
Translates to: YGKRARIHLASNPGADTHLMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp AGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTCAGGAGTACAAAGGCTaGCCTCAGATAAAACATGCC +
Preference number: 2 (lower is better)
Translates to: SFTHCLASSSRSQIHSLSQEYKG*PQIKHA
Trigger: GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTG...ACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CAA 90 bp CCTCAGATAAAACATGCCACTACGGACAAAAGCTTCACTCATTGCTaGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTACTGC +
Preference number: 2 (lower is better)
Translates to: PQIKHATTDKSFTHC*ASSSRSQIHSLSYC
Trigger: GCAGTAACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR TCA 90 bp CCCATTTATAACACAGGAGTACAAAGGCTGGCCTCAGATAAAACATGCCACTACGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGC +
Preference number: 2 (lower is better)
Translates to: PIYNTGVQRLASDKTCHYGSQWL*LQQVLS
Trigger: GCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCC...GTAGTGGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTGTGTTATAAATGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR GCA 90 bp AGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTCACAGCCTCAGTTACTaGTGCTTTCTGAGAAGCTAT +
Preference number: 2 (lower is better)
Translates to: SFTHCLASSSRSQIHSLSHSLSY*CFLRSY
Trigger: ATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTG...ACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAACCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTT +
Preference number: 2 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEPDAMV*GHGRNV
Trigger: AACATTTCTTCCATGGCCCCACACCATGGCATCCGG...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCCTCTTCTTCAAAACATaGAGGATGACCCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGLFFKT*RMTLPE
Trigger: CTCAGGGAGGGTCATCCTCCATGTTTTGAAGAAGAG...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCCTCTTCTTCAAAACATaGAGGATGACCCTCCCTGAG +
Preference number: 2 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPLFFKT*RMTLPE
Trigger: CTCAGGGAGGGTCATCCTCCATGTTTTGAAGAAGAG...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CCA 90 bp CTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCAACAAACAGATGATATaGGAAAAGGGCTCGGATTCA +
Preference number: 2 (lower is better)
Translates to: LSLPFGANSCPLGSPQCSNKQMI*EKGSDS
Trigger: TGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT...GCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR CCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 2 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDSFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR-3UTR GCA 90 bp CCCATTTATAACACAGGAGTACAAAGGCTGGCCTCAGATAAAACATGCCACTACAAAAGCTTCACTCATTaGTTGGCTAGCAGCTCCCGT +
Preference number: 2 (lower is better)
Translates to: PIYNTGVQRLASDKTCHYKSFTH*LASSSR
Trigger: ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTT...GTAGTGGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTGTGTTATAAATGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAAACAAACAGATGATATaGGAAAAGGGCTCGGATTCA +
Preference number: 2 (lower is better)
Translates to: ECRNRPQKHLYSISRVPENKQMI*EKGSDS
Trigger: TGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CAA 90 bp TTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCCCAAGTCCCCAGCCCTaGGGCCGGCAGCGTCACTGC +
Preference number: 3 (lower is better)
Translates to: LGRQRHCYSQTTPGSHAGPSPQP*GRQRHC
Trigger: GCAGTGACGCTGCCGGCCCAAGGGCTGGGGACTTGG...GCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp AGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCCAGCGAGGTGTGGGCC +
Preference number: 3 (lower is better)
Translates to: SSSLRGSIGFCW*KVTRASSEVWA
Trigger: GGCCCACACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp GTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCGTCCAGCGAGGTGTGG +
Preference number: 3 (lower is better)
Translates to: VSSSLRGSIGFC*WKVTRASSEVW
Trigger: CCACACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGAC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp TGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTaGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGG +
Preference number: 3 (lower is better)
Translates to: CGSPWQRVPEPG*TCSLAVPRGKG
Trigger: CCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR GCA 72 bp TGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGGGCGTCCAGCGAGGTG +
Preference number: 3 (lower is better)
Translates to: CVSSSLRGSIGF*WWKVTRASSEV
Trigger: CACCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR GCA 72 bp GGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCCCTGGTaGTCTGGCTTGGACTCCTGGGAGGATAGGGCTCTC +
Preference number: 3 (lower is better)
Translates to: GSWSFSGSAKPW*SGLDSWEDRAL
Trigger: GAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CAA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGATGGCAGCAGCTGCTTaGGGCTCTGCGGAGACACTG +
Preference number: 3 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWMAAAA*GSAETL
Trigger: CAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCAT...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CAA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAG +
Preference number: 3 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWGKGWR*LVLLRE
Trigger: CTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCC...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR GCA 72 bp TTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTaGCAAGCCCTGGTGCTCTGGCTTGGACTCCTGGGA +
Preference number: 3 (lower is better)
Translates to: LVLLRELVVLRL*QALVLWLGLLG
Trigger: TCCCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp GCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTaGTCGTTCTCAGGCTCTGCCAAGCCCTGGTGCTCT +
Preference number: 3 (lower is better)
Translates to: AKGGGCWYSSGS*SFSGSAKPWCS
Trigger: AGAGCACCAGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CAA 90 bp CCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGCTCTCGGGGAGCATTTaGAGGCTCCTCCAGAGTTTC +
Preference number: 3 (lower is better)
Translates to: PWQRVPEPGWTCSLAVPRLSGSI*RLLQSF
Trigger: GAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAG...CCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR GCA 72 bp AGGGGCAGACACCGGGCAGGCAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAGATCCTCGTAATCCAC +
Preference number: 3 (lower is better)
Translates to: RGRHRAGSFLGH*VGVEEEILVIH
Trigger: GTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCTGCCTGCCCGGTGTCTGCCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp GCTGTTGACCACCTCCACTCCTGCCCCTCAGCCAGGTaGGAGGTGCCAGCCTCCTGTCATATACATACCTCC +
Preference number: 3 (lower is better)
Translates to: AVDHLHSCPSAR*EVPASCHIHTS
Trigger: GGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGGGCAGGAGTGGAGGTGGTCAACAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR CCA 72 bp GGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTG +
Preference number: 3 (lower is better)
Translates to: GAMEEMLRHSGV*QPLAASPRARV
Trigger: CACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR GCA 72 bp AGACATGGGAAATCTAGGGGCAGGGCACACAGTTTGTaGAAAGGACCTGAGGTGGGGCCGGCACACGCAGAG +
Preference number: 3 (lower is better)
Translates to: RHGKSRGRAHSL*KGPEVGPAHAE
Trigger: CTCTGCGTGTGCCGGCCCCACCTCAGGTCCTTTGCACAAACTGTGTGCCCTGCCCCTAGATTTCCCATGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586872.5
3UTR GCA 72 bp GACGACAAGTTCACAGTGGCGAGGTGGCTTTTTAGCTaGTGCCGGACCCTCTGGCCTCTCTCGGGGAGCATT +
Preference number: 3 (lower is better)
Translates to: DDKFTVARWLFS*CRTLWPLSGSI
Trigger: AATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp TCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTaGGCTCTGCGGAGACACTGCGGGGGCTGGGACATC +
Preference number: 3 (lower is better)
Translates to: SKSFTMKWQQLL*ALRRHCGGWDI
Trigger: GATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp GGCTCTGCCAAGCCCTGGTGCTCTGGCTTGGACTCCTaGGAGGATAGGGCTCTCACTACCATTTGGTGCCAA +
Preference number: 3 (lower is better)
Translates to: GSAKPWCSGLDS*EDRALTTIWCQ
Trigger: TTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CAA 90 bp TACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCGACATGAAGCACCCCTaGCCCCCTCCAAGGAAACCC +
Preference number: 3 (lower is better)
Translates to: YSQTTPGSHAGFFTHWPCDMKHP*PPPRKP
Trigger: GGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTC...GCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CAA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CAA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTCCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 3 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CAA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACCTCGTAATCCACGTTaGCGGGATCCTGCCTGCAGG +
Preference number: 3 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAPRNPR*RDPACR
Trigger: CCTGCAGGCAGGATCCCGCAAACGTGGATTACGAGG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613195.4
3UTR GCA 72 bp GCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATaGAGGCTTCTTCACTCACTGGCCATGCAACACCCA +
Preference number: 3 (lower is better)
Translates to: ASLLQPDYPRFP*RLLHSLAMQHP
Trigger: TGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR GCA 72 bp AACCTGGGAGGCGGAGGTTGCAGCGAGCCTAGACTGTaGCATTCCACTCCAGCTTGGTCGACAAAGCAAGAC +
Preference number: 3 (lower is better)
Translates to: NLGGGGCSEPRL*HSTPAWSTKQD
Trigger: GTCTTGCTTTGTCGACCAAGCTGGAGTGGAATGGCACAGTCTAGGCTCGCTGCAACCTCCGCCTCCCAGGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591154.1
3UTR GCA 72 bp GACTCCTGGGAGGATAGGGCTCTCACTACCATTTGGTaGCAACTCCTGTCCCCTGGGGTCACCTCAATGCAG +
Preference number: 3 (lower is better)
Translates to: DSWEDRALTTIW*QLLSPGVTSMQ
Trigger: CTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp TGCAGCGAGCCTAGACTGTGCCATTCCACTCCAGCTTaGTCGACAAAGCAAGACTCCGTCTCCTCAGGGGCA +
Preference number: 3 (lower is better)
Translates to: CSEPRLCHSTPA*STKQDSVSSGA
Trigger: TGCCCCTGAGGAGACGGAGTCTTGCTTTGTCGACCAAGCTGGAGTGGAATGGCACAGTCTAGGCTCGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591154.1
3UTR CCA 72 bp GGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTaGATCTCCGGACATCCAAGAGTGACGACAAGTTCA +
Preference number: 3 (lower is better)
Translates to: GCLFRSQGLRSP*ISGHPRVTTSS
Trigger: TGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR-3UTR CAA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTGACACAGGACTGGCTTaGGGGAGGCCTGTAGTCCCA +
Preference number: 3 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPDTGLA*GRPVVP
Trigger: TGGGACTACAGGCCTCCCCAAAGCCAGTCCTGTGTC...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591154.1
3UTR GCA 72 bp CCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATaGAACACCCAGCAGGTTACTAACCTCGCTGTGCCT +
Preference number: 3 (lower is better)
Translates to: PGSHAGFFTHWP*NTQQVTNLAVP
Trigger: AGGCACAGCGAGGTTAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp TTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGT +
Preference number: 3 (lower is better)
Translates to: FPGSRRPPDAMV*GHGRNVKAFRS
Trigger: ACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR CCA 72 bp ACATCCAAGAGTGACGACAAGTTCACAGTGGCGAGGTaGCTTTTTAGCTGCTGCCGGACCCTCTGGCCTCTC +
Preference number: 3 (lower is better)
Translates to: TSKSDDKFTVAR*LFSCCRTLWPL
Trigger: GAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGTCACTCTTGGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp TTGGACTCCTGGGAGGATAGGGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATG +
Preference number: 3 (lower is better)
Translates to: LDSWEDRALTTI*CQLLSPGVTSM
Trigger: CATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCTATCCTCCCAGGAGTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
3UTR CCA 72 bp ACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTaGCCATGCAACACCCAGCAGGTTACTAACCTCGCT +
Preference number: 3 (lower is better)
Translates to: TTPGSHAGFFTH*PCNTQQVTNLA
Trigger: AGCGAGGTTAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp TCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCA +
Preference number: 3 (lower is better)
Translates to: SISRVPEDPRMP*CGAMEEMLRHS
Trigger: TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR-3UTR CAA 90 bp CCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTGCGGAGCTTCACTCATTGCTaGGCTAGCAGCTCCCGTTCT +
Preference number: 3 (lower is better)
Translates to: PSSKSFTMKWQQLLWALRSFTHC*ASSSRS
Trigger: AGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT...CCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR TCA 72 bp CCACAGCCTCAGTTACTGCTGCTTTCTGAGAAGCTATaGCATGAAGCACCCCTTGCCCCCTCCAAGGAAACC +
Preference number: 3 (lower is better)
Translates to: PQPQLLLLSEKL*HEAPLAPSKET
Trigger: GGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp TGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTaGCCTTGGTCACGCCTCTTATCCTCTCTGAACCTC +
Preference number: 3 (lower is better)
Translates to: WLQILVLTPIAL*PWSRLLSSLNL
Trigger: GAGGTTCAGAGAGGATAAGAGGCGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR CCA 72 bp ATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCTCTGCGGAGACACTGC +
Preference number: 3 (lower is better)
Translates to: MKVPSSKSFTMK*QQLLWALRRHC
Trigger: GCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR-3UTR CAA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTAGCTTCACTCATTGCTaGGCTAGCAGCTCCCGTTCT +
Preference number: 3 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWASFTHC*ASSSRS
Trigger: AGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp AACATGCCACTACGGACAAAAGCTTCACTCATTGCTTaGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCA +
Preference number: 3 (lower is better)
Translates to: NMPLRTKASLIA*LAAPVLRSTAS
Trigger: TGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR CCA 72 bp CAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTaGCTTCAAATCCTGGTGCTGACACCCATAGCTCTG +
Preference number: 3 (lower is better)
Translates to: QTDDMGKGLGFT*LQILVLTPIAL
Trigger: CAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR GCA 72 bp ATAAAACATGCCACTACGGACAAAAGCTTCACTCATTaGTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGC +
Preference number: 3 (lower is better)
Translates to: IKHATTDKSFTH*LASSSRSQIHS
Trigger: GCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR GCA 72 bp AACACAGGAGTACAAAGGCTGGCCTCAGATAAAACATaGCACTACGGACAAAAGCTTCACTCATTGCTTGGC +
Preference number: 3 (lower is better)
Translates to: NTGVQRLASDKT*HYGQKLHSLLG
Trigger: GCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTGTGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
3UTR TCA 72 bp GCTTGCAGTGTGCTTTTAGACAACAGAACAAACAGATaGTATGGGAAAAGGGCTCGGATTCACCTGGCTTCA +
Preference number: 3 (lower is better)
Translates to: ACSVLLDNRTNR*YGKRARIHLAS
Trigger: TGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTTCTGTTGTCTAAAAGCACACTGCAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCGCGTCCAGCGAGGTGTaGGCCACCTTCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTASSEV*ATFSPG
Trigger: CCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGC...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTGCGTCCAGCGAGGTGTaGGCCACCTTCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WAGSVTATARLPQVPMQAASSEV*ATFSPG
Trigger: CCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGC...AGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGCGTCCAGCGAGGTGTaGGCCACCTTCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKASSEV*ATFSPG
Trigger: CCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGC...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTTGCGGGATCCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTLRDPA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGGATCCCGCAA...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR GCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTCTGCCAAGCCCTGGTaGTCTGGCTTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTSAKPW*SGLDSW
Trigger: CCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGA...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTCTGCCAAGCCCTTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: AVVGTPPGAGRSQALPSPSGTPS*ASWPIW
Trigger: CCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGA...AGGGCTTGGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCCCCAGGGGCAAAGGGTaGCGGTTGTTGGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTPRGKG*RLLVLL
Trigger: GAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGG...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GTCCCCAGCCCTTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCTGGCGCTGGGTAGGTaGCAGGCAGAAAGAGGACCT +
Preference number: 4 (lower is better)
Translates to: VPSPWAGSVTATARLPQVLALGR*QAERGP
Trigger: AGGTCCTCTTTCTGCCTGTCACCTACCCAGCGCCAG...AACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAAGGGCTGGGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR GCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTGACCACCTCCACTCCTaGCCCTCAGCCAGGTGGGAG +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGDHLHS*PSARWE
Trigger: CTCCCACCTGGCTGAGGGGCAGGAGTGGAGGTGGTC...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR GCA 90 bp CGGGATCCTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTTGCGGGATCCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: RDPACRAVSAAPCAAQLALRDPA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGGATCCCGCAA...AGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGGATCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591154.1
ENST00000613195.4
CDS-3UTR GCA 90 bp CCCTGGGGTCACCTCAATGCAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTCGGCCCCACAGAGTaGTGGGACTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: PWGHLNAADRPLGLPGGDLGPTE*WDYRHE
Trigger: CTCATGCCTGTAGTCCCAGCACTCTGTGGGGCCGAG...GTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCTCAAGCGATCTGCCTaGCTCGGCCCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKLKRSA*LGPTEC
Trigger: GCACTCTGTGGGGCCGAGGCAGGCAGATCGCTTGAG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACGCGTCCAGCGAGGTGTaGGCCACCTTCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: AASLLQPDYPRFPCRLLHASSEV*ATFSPG
Trigger: CCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGC...GTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTCCGTCTTGGGCCAGCTaGCCCATCTGGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSPSWAS*PIWVCT
Trigger: TGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGG...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVSGTPS*ASWPIW
Trigger: CCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGA...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTTGCTGCCGGACCCTCTaGCCTCTCTCGGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSCCRTL*PLSGSI
Trigger: AATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCA...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGGGCTCTGCCAAGCCCTaGTGCTCTGGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: PEPGWTCSLAVPRGKGWRGSAKP*CSGLDS
Trigger: GGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCC...CCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCCTGGGGTCACCTCAATGCAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCCCAGGGGCAAAGGGTaGCGGTTGTTGGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: PWGHLNAADRPLGLPGGDPRGKG*RLLVLL
Trigger: GAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGG...GTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCCAGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGTTTGTGCAAAGGACCTaGGGTGGGGCCGGCACACGC +
Preference number: 4 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKFVQRT*GGAGTR
Trigger: GCGTGTGCCGGCCCCACCTCAGGTCCTTTGCACAAA...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR TCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCCGAGGTGGGATCCCCTaGGTGATCTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFRGGIP*VILAAF
Trigger: AAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCG...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCGCTGTGAGGGGCTTTTaGGAGATGTGGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFAVRGF*EMWPHR
Trigger: CCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGC...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTAGCTCACCCCATGGGTaGGTGCAGGAACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: WAGSVTATARLPQVPMQASSPHG*VQEQTP
Trigger: TGGGGTCTGTTCCTGCACTCACCCATGGGGTGAGCT...AGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR TCA 90 bp TTTGGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCCCCCTCATCCCAGGCTGGACTGCAGTaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: FGLCGDTAGAGTSYSPSSQAGLQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCATCACTGCAGTCCAGCCTG...GGATGAGGGGGAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGCGGGATCCTTCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWRDPSA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGAAGGATCCCG...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTGGCCCATCTGGGTGTaGACAAACCAGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFWPIWV*TNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCA...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCGGGATCCTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: AGSCLQGCVSSSLRGSIGSIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...GCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGGATCCCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591154.1
ENST00000613195.4
CDS-3UTR CCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCCCTGCGCGGCTCAATTaGCTTCTGCTGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFPARLN*LLLVEG
Trigger: ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGG...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCGAACAACAGACGGTATaGCAGCAGGGCTGGCGCTGG +
Preference number: 4 (lower is better)
Translates to: LGRQRHCYSQTTPGSHAGEQQTV*QQGWRW
Trigger: CCAGCGCCAGCCCTGCTGCCATACCGTCTGTTGTTC...GCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGAAAGGGTGGCGGTTGTTaGTACTCCTCCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGKGGGC*YSSGSW
Trigger: CCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTT...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWGSQWL*LQQVLS
Trigger: GCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCC...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: LPAGLCQQLPARLNWLLLGSQWL*LQQVLS
Trigger: GCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCC...CAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp GAGGTGTGGGCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: EVWATFSPGIMKVPSSKSSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...GCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACGAGGTGGGATCCCCTaGGTGATCTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGRGGIP*VILAAF
Trigger: AAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCG...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGGCTGTGAGGGGCTTTTaGGAGATGTGGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKAVRGF*EMWPHR
Trigger: CCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGC...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCGGGATCCTTCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSRDPSA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGAAGGATCCCG...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGTTTGCGGGATCCTTCTaGCTGCAGGGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWFAGSF*LQGCVS
Trigger: GCTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAA...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTTTTGCGGGATCCTTCTaGCTGCAGGGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSFAGSF*LQGCVS
Trigger: GCTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAA...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGCCCATCTGGGTGTaGACAAACCAGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWWPIWV*TNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCA...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGTGGCTTTTTAGCTGCTaGCGGACCCTCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWWLFSC*RTLWPL
Trigger: GAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCA...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGAGGTGGCTTTTTAGCTaGTGCCGGACCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWRWLFS*CRTLWP
Trigger: AGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCT...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCTGAGTGATCTTGGCTaGCTTTTCCGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKLSDLG*LFRSQG
Trigger: GCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGTGGGGCGGGGCTGGCTaGCCCGAGGCAGTTCCTGTT +
Preference number: 4 (lower is better)
Translates to: HLASNPGADTHSSVALVTWGGAG*PEAVPV
Trigger: AACAGGAACTGCCTCGGGGCAGCCAGCCCCGCCCCA...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCGCTTCACTCATTGCTTaGCTAGCAGCTCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTASLIA*LAAPVL
Trigger: GAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGC...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCGCGTCCAGCGAGGTGTaGGCCACCTTCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: GHCVGVEEEILVIHVCGIASSEV*ATFSPG
Trigger: CCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGC...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCGTCCAGCGAGGTGTaGGCCACCTTCTCCCCGGGG +
Preference number: 4 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLASSEV*ATFSPG
Trigger: CCCCGGGGAGAAGGTGGCCCACACCTCGCTGGACGC...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGCCTGCGCGGCTCAATTaGCTTCTGCTGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: LPAGLCQQLPARLNWLLLPARLN*LLLVEG
Trigger: ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGG...CAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CGGGATCCTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: RDPACRAVSAAPCAAQLAPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...AGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGGATCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591154.1
ENST00000613195.4
CDS-3UTR CCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTCATAGCTTCCTGGGGTaGAGGGAAGGTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSHSFLG*REGHLG
Trigger: TCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATG...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTGTCATAGCTTCCTaGGGTGGAGGGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFSVIAS*GGGKVT
Trigger: GGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGA...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCTTGAGATTGCACCATaGAACCACTCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKLEIAP*NHSGTP
Trigger: CGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCACACAGGACTGGCTTTaGGGAGGCCTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: QLTDLSAFLVGTFLSFGATQDWL*GGLLRG
Trigger: GCCCCTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGT...GGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp ATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGACACAGGACTGGCTTTaGGGAGGCCTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: MLRHSGVWQPLAASPRARTQDWL*GGLLRG
Trigger: GCCCCTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGT...CCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCGGGGGCAGGAGGAAGTaGCTTCCTTGGTGGTTATTC +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFGGRRK*LPWWLF
Trigger: GAATAACCACCAAGGAAGCCACTTCCTCCTGCCCCC...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCCTGGGGTCACCTCAATGCAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACACCTCTCGGCCTTCCTaGTGGGGACCTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PWGHLNAADRPLGLPGGDTSRPS*WGPFCL
Trigger: AAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGT...GTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: FHFPGSRRPPDAMVWGHGRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...TCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGTCCGGTCCCAGGGCCTaGGATCACCGTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQSGPRA*DHRGSP
Trigger: CGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGA...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTAGCTGTGCCAGTGCCTaGAGGAGCCTGGGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSSCASA*RSLGFD
Trigger: ATCGAAACCCAGGCTCCTGCAGGCACTGGCACAGCT...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGCTCACTACCATTTGGTaGCAACTCCTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PWQRVPEPGWTCSLAVPRLTTIW*QLLSPG
Trigger: CCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAG...CCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGCCTGCGCGGCTCAATTaGCTTCTGCTGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKPARLN*LLLVEG
Trigger: ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGG...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTGGCTTGGACTCCTaGGAGGATAGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: WAGSVTATARLPQVPMQASGLDS*EDRALT
Trigger: AGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGA...AGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp CTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGATCTCCGGACATCCAAGTACTCCTCCGGGAGCTaGTCGTTCTCAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LPFPVPGPEITVDLRTSKYSSGS*SFSGSA
Trigger: GGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTA...CTTGGATGTCCGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGAAGGGTGGCGGTTGTTaGTACTCCTCCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWKGGGC*YSSGSW
Trigger: CCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTT...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCCTGTCTGGTTGCCTCTaGACTTCACTCTGCATGCCT +
Preference number: 4 (lower is better)
Translates to: SGVWQPLAASPRARVDLFLSGCL*TSLCMP
Trigger: AGGCATGCAGAGTGAAGTCCAGAGGCAACCAGACAG...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGGTCTGCACGTCAATaGGGCGGGGCTGGCTGCCCC +
Preference number: 4 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPRSARQ*GGAGCP
Trigger: GGGGCAGCCAGCCCCGCCCCATTGACGTGCAGACCT...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616645.4
3UTR CAA 72 bp TCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGTTGTaGGTACTCCTCCGGGAGCTGGTCGTTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: SLAVPRGKGWRL*VLLRELVVLRL
Trigger: GAGCCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CAGCAGCTGCTTTGGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: QQLLWALRRHCGGWDILLSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...GAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGATCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCGGCTTCCTTTCCTTTaGTTGGTGACACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKRLPFL*LVTQDW
Trigger: CCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGATCTCGGGGAGCATTTTaGGGCTCCTCCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGSRGAF*GSSRVS
Trigger: AGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGA...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGACCGGACATCCAAGAGTaGCGACAAGTTCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: FHFPGSRRPPDAMVWGHGPDIQE*RQVHSG
Trigger: GCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGG...TCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTTCCGGTCCCAGGGCCTaGGATCACCGTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: PPDAMVWGHGRNVKAFRSSGPRA*DHRGSP
Trigger: CGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGA...ACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCATCCGGTCCCAGGGCCTaGGATCACCGTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLASGPRA*DHRGSP
Trigger: CGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGA...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCGCCTCTTATCCTCTCTaGACCTCAGTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTASYPL*TSVSSS
Trigger: TGAAGAAGAGACTGAGGTTCAGAGAGGATAAGAGGC...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp ATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: MLRHSGVWQPLAASPRARVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...CCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGTGGCTTTTTAGCTGCTaGCGGACCCTCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWWLFSC*RTLWPL
Trigger: GAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCA...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp ATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGAGGTGGCTTTTTAGCTaGTGCCGGACCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: MLRHSGVWQPLAASPRARRWLFS*CRTLWP
Trigger: AGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCT...CCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTCTGAGTGATCTTGGCTaGCTTTTCCGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVLSDLG*LFRSQG
Trigger: GCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAG...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GCTTCCTTTCCTTTGATTGGTGACACAGGACTGGCTTTGGGGAGGCCTCCTCAGCCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: ASFPLIGDTGLALGRPPQPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...CTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGGCTTCACTCATTGCTTaGCTAGCAGCTCCCGTTCTC +
Preference number: 4 (lower is better)
Translates to: CLQGCVSSSLRGSIGFCWASLIA*LAAPVL
Trigger: GAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGC...CCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTCAAGTCCCCAGCCCTTaGGCCGGCAGCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: GSHAGFFTHWPCNTQQVTQVPSP*AGSVTA
Trigger: AGCAGTGACGCTGCCGGCCCAAGGGCTGGGGACTTG...AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACGGAGGGAAGGTCACCTaGGAGACCCTTGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: PDYPRFPCRLLHSLAMQHGGKVT*ETLGWP
Trigger: CGGCCATCCAAGGGTCTCCCAGGTGACCTTCCCTCC...GTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGTCTGTCATAGCTTCCTaGGGTGGAGGGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKSVIAS*GGGKVT
Trigger: GGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGA...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp AGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: SFTHCLASSSRSQIHSLSSGTPS*ASWPIW
Trigger: CCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGA...ACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCCTTGAGATTGCACCATaGAACCACTCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: QLTDLSAFLVGTFLSFGALEIAP*NHSGTP
Trigger: CGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAG...GGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCACACAGGACTGGCTTTaGGGAGGCCTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: LSLPFGANSCPLGSPQCSTQDWL*GGLLRG
Trigger: GCCCCTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGT...GCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACTGCTGCCGGACCCTCTaGCCTCTCTCGGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: PDYPRFPCRLLHSLAMQHCCRTL*PLSGSI
Trigger: AATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCA...GTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp GCGGGATCCTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCACGACAAGTTCACAGTaGCGAGGTGGCTTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: AGSCLQGCVSSSLRGSIGTTSSQ*RGGFLA
Trigger: AGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGT...GCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGGATCCCGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR CCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTTCTGGCTTGGACTCCTaGGAGGATAGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGSGLDS*EDRALT
Trigger: AGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGA...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGCTCTGTCATCCAGGCTaGACTGCAGTGATGCGATCT +
Preference number: 4 (lower is better)
Translates to: PWQRVPEPGWTCSLAVPRLCHPG*TAVMRS
Trigger: AGATCGCATCACTGCAGTCCAGCCTGGATGACAGAG...CCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
3UTR CAA 72 bp TGTTCTCTAGCAGTACCCAGGGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAGCTGGTCGTTCTCAGG +
Preference number: 4 (lower is better)
Translates to: CSLAVPRGKGWR*LVLLRELVVLR
Trigger: CCTGAGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGTACTGCTAGAGAACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp TGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTCTTTCTGAGAAGCTATaGCATGAAGCACCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: WAGSVTATARLPQVPMQALSEKL*HEAPLA
Trigger: GGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAG...AGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp TTTGGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCCCCCTCATCCCTTTCTGAGAAGCTATaGCATGAAGCACCCCTTGCC +
Preference number: 4 (lower is better)
Translates to: FGLCGDTAGAGTSYSPSSLSEKL*HEAPLA
Trigger: GGCAAGGGGTGCTTCATGTCATAGCTTCTCAGAAAG...GGATGAGGGGGAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGCCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCCCTGAGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGCGGCTTCCTTTCCTTTaGTTGGTGACACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PLSDLGCLFRSQGLRSPWRLPFL*LVTQDW
Trigger: CCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCG...CCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCATCCGGTCCCAGGGCCTaGGATCACCGTGGATCTCCG +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSSGPRA*DHRGSP
Trigger: CGGAGATCCACGGTGATCTCAGGCCCTGGGACCGGA...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GAGGTGTGGGCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: EVWATFSPGIMKVPSSKSVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...GCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTCTCGTAATCCACGTTTaGGGGATCCTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGLVIHV*GILLPA
Trigger: TGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAG...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCTCGGCCCCACAGAGTaGTGGGACTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRLGPTE*WDYRHE
Trigger: CTCATGCCTGTAGTCCCAGCACTCTGTGGGGCCGAG...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCCCTCAGCCAGGTGGGAGGTGCCAGCCTCCTGTCATATACATACCTCCTCAGGGGCTTCTTCACTCACTaGCCATGCAACACCCAGCAG +
Preference number: 4 (lower is better)
Translates to: PLSQVGGASLLSYTYLLRGFFTH*PCNTQQ
Trigger: CTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCC...CCTGAGGAGGTATGTATATGACAGGAGGCTGGCACCTCCCACCTGGCTGAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp TTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: LGRQRHCYSQTTPGSHAGSFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...GCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CTCTGGCCTCTCTCGGGGAGCATTTTGAGGCTCCTCCAGAGTTTCTGGCGGGTCTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: LWPLSGSILRLLQSFWRVSIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...GACCCGCCAGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAGAGGCCAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGGAGGGAAGGTCACCTaGGAGACCCTTGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLGGKVT*ETLGWP
Trigger: CGGCCATCCAAGGGTCTCCCAGGTGACCTTCCCTCC...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGAGGGAAGGTCACCTaGGAGACCCTTGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWGGKVT*ETLGWP
Trigger: CGGCCATCCAAGGGTCTCCCAGGTGACCTTCCCTCC...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGSGTPS*ASWPIW
Trigger: CCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGA...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACCTTGAGATTGCACCATaGAACCACTCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: AASLLQPDYPRFPCRLLHLEIAP*NHSGTP
Trigger: CGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAG...GTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTGCCCCTCAGCCAGGTaGGAGGTGCCAGCCTCCTGT +
Preference number: 4 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPCPSAR*EVPASC
Trigger: ACAGGAGGCTGGCACCTCCCACCTGGCTGAGGGGCA...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp CTGAGAAGCTATGACATGAAGCACCCCTTGCCCCCTCCAAGGAAACCCAAGAGCGCAAAGGACCTGAGGTaGGGCCGGCACACGCAGAGA +
Preference number: 4 (lower is better)
Translates to: LRSYDMKHPLPPPRKPKSAKDLR*GRHTQR
Trigger: TCTCTGCGTGTGCCGGCCCCACCTCAGGTCCTTTGC...GCTCTTGGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAACACAGGACTGGCTTTaGGGAGGCCTCCTCAGGGGC +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLATQDWL*GGLLRG
Trigger: GCCCCTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGT...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGATCTCGGCCTTCCTGGTaGGGACCTTTCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: FHFPGSRRPPDAMVWGHGSRPSW*GPFCLL
Trigger: CAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGA...TCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTACCTCTCGGCCTTCCTaGTGGGGACCTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVTSRPS*WGPFCL
Trigger: AAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGT...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGGCTCTGCCAAGCCCTaGTGCTCTGGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLGSAKP*CSGLDS
Trigger: GGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCC...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCAAGGGTGGCGGTTGTTaGTACTCCTCCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: LSLPFGANSCPLGSPQCSKGGGC*YSSGSW
Trigger: CCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTT...GCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCCCTGAGTGATCTTGGCTGCCTTTTCCGGTCCCAGGGCCTGAGATCACCGTGGCCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: PLSDLGCLFRSQGLRSPWPDAMV*GHGRNV
Trigger: AACATTTCTTCCATGGCCCCACACCATGGCATCCGG...CCACGGTGATCTCAGGCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTCCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGPDAMV*GHGRNV
Trigger: AACATTTCTTCCATGGCCCCACACCATGGCATCCGG...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTCCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVSPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CATTGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTACTGCTGCTCCTCTGGAAGCTGTTaGCCACCTCCACTCCTGCCC +
Preference number: 4 (lower is better)
Translates to: HCLASSSRSQIHSLSYCCSSGSC*PPPLLP
Trigger: GGGCAGGAGTGGAGGTGGTCAACAGCTTCCAGAGGA...GCAGCAGTAACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR TCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTCGGCTTCCTTTCCTTTaGTTGGTGACACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVRLPFL*LVTQDW
Trigger: CCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCG...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCGAGGTGGGATCCCCTaGGTGATCTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRRGGIP*VILAAF
Trigger: AAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCG...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GCTTCCTTTCCTTTGATTGGTGACACAGGACTGGCTTTGGGGAGGCCTCCTCAGTCACCTCAATGCAGCTaGCCGACCTCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: ASFPLIGDTGLALGRPPQSPQCS*PTSRPS
Trigger: GGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGA...CTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGTCACCTCAATGCAGCTaGCCGACCTCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLSPQCS*PTSRPS
Trigger: GGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGA...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGGCCTCTTATCCTCTCTaGACCTCAGTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKASYPL*TSVSSS
Trigger: TGAAGAAGAGACTGAGGTTCAGAGAGGATAAGAGGC...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGCAGGCTGGACTGCAGTaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWQAGLQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCATCACTGCAGTCCAGCCTG...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CAGCAGCTGCTTTGGGCTCTGCGGAGACACTGCGGGGGCTGGGACATCCTACTCAAAAGCTTCACTCATTaGTTGGCTAGCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: QQLLWALRRHCGGWDILLKSFTH*LASSSR
Trigger: ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTT...GAGTAGGATGTCCCAGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp GAGGTGTGGGCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: EVWATFSPGIMKVPSSKSSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...GCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCTGGCCCATCTGGGTGTaGACAAACCAGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: LSLPFGANSCPLGSPQCSWPIWV*TNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCA...GCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAGCTGCTTTGGGCTCTaGGGAGACATTGTAGGAGAG +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVSCFGL*GDIVGE
Trigger: CTCTCCTACAATGTCTCCGCAGAGCCCAAAGCAGCT...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR GCA 90 bp GGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTGTCGTTCTCAGGCTCTaGCAAGCCCTGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: GSHAGFFTHWPCNTQQVTVVLRL*QALVLW
Trigger: CCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGAC...AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GGGGTCACCTCAATGCAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: GVTSMQLTDLSAFLVGTFLMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...AAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGSFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCCTGCGCGGCTCAATTaGCTTCTGCTGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: QTTPGSHAGFFTHWPCNTPARLN*LLLVEG
Trigger: ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGG...GGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGCCTGCGCGGCTCAATTaGCTTCTGCTGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQPARLN*LLLVEG
Trigger: ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGG...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: AASLLQPDYPRFPCRLLHPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...GTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp ACCGTGGATCTCCGGACATCCAAGAGTGACGACAAGTTCACAGTGGCGAGGTGGCATAGCTTCCTGGGGTaGAGGGAAGGTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: TVDLRTSKSDDKFTVARWHSFLG*REGHLG
Trigger: TCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATG...CCACCTCGCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGGAGATCCACGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCGCCAGCTGGCCCATCTaGGTGTGCACAAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: GHCVGVEEEILVIHVCGIASWPI*VCTNQS
Trigger: GGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGC...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTCCGTCTTGGGCCAGCTaGCCCATCTGGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPPSWAS*PIWVCT
Trigger: TGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGG...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp AGGGCTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGTTGGTGACACAGGACTaGCTTTGGGGAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: RALTTIWCQLLSPGVTSMLVTQD*LWGGLL
Trigger: GAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAA...CATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGCTCTGTCCCCCGAGGTaGGATCCCCTGAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQLCPPR*DPLSDL
Trigger: AAGATCACTCAGGGGATCCCACCTCGGGGGACAGAG...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTTCTCGGCCTTCCTGGTaGGGACCTTTCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVSRPSW*GPFCLL
Trigger: CAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGA...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGTACTCCTCCGGGAGCTaGTCGTTCTCAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWYSSGS*SFSGSA
Trigger: GGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTA...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTTACTCCTCCGGGAGCTaGTCGTTCTCAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GSHAGFFTHWPCNTQQVTYSSGS*SFSGSA
Trigger: GGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTA...AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGTACTCCTCCGGGAGCTaGTCGTTCTCAGGCTCTGCC +
Preference number: 4 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLYSSGS*SFSGSA
Trigger: GGCAGAGCCTGAGAACGACCAGCTCCCGGAGGAGTA...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAAGGGTGGCGGTTGTTaGTACTCCTCCGGGAGCTGG +
Preference number: 4 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPKGGGC*YSSGSW
Trigger: CCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTT...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACCCAGGGGCAAAGGGTaGCGGTTGTTGGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAPRGKG*RLLVLL
Trigger: GAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWDPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPDPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACTCTTCTTCAAAACATaGAGGATGACCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGLFFKT*RMTLPE
Trigger: CTCAGGGAGGGTCATCCTCCATGTTTTGAAGAAGAG...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGCCACACAGGGATCCGTGTAGCCTCTGTCCCCCGAGGTGGGATCCCCTGAGTCTCTTCTTCAAAACATaGAGGATGACCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: WPHRDPCSLCPPRWDPLSLFFKT*RMTLPE
Trigger: CTCAGGGAGGGTCATCCTCCATGTTTTGAAGAAGAG...ACTCAGGGGATCCCACCTCGGGGGACAGAGGCTACACGGATCCCTGTGTGGCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp GCTTCCTTTCCTTTGATTGGTGACACAGGACTGGCTTTGGGGAGGCCTCCTCAGGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: ASFPLIGDTGLALGRPPQGSQWL*LQQVLS
Trigger: GCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCC...CTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGCTCAGCATCCTCTCTTaGGATTGCACCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWLSILS*DCTMEP
Trigger: TGGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAG...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR GCA 90 bp TGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTTACTAACCTCGCTGTaGCTCAGTTTCCCCCATTTA +
Preference number: 4 (lower is better)
Translates to: WAGSVTATARLPQVPMQALLTSL*LSFPHL
Trigger: TAAATGGGGGAAACTGAGGCACAGCGAGGTTAGTAA...AGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp CCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: PPDAMVWGHGRNVKAFRSVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...ACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTGAGTGATCTTGGCTaGCTTTTCCGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: GHCVGVEEEILVIHVCGILSDLG*LFRSQG
Trigger: GCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAG...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGCTGAGTGATCTTGGCTaGCTTTTCCGGTCCCAGGGC +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWLSDLG*LFRSQG
Trigger: GCCCTGGGACCGGAAAAGGCAGCCAAGATCACTCAG...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTCTCACTACCATTTGGTaGCAACTCCTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: PGSHAGFFTHWPCNTQQVLTTIW*QLLSPG
Trigger: CCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAG...AACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp GGTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCCCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: GECRNRPQKHLYSISRVPPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...GGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GAGGTGTGGGCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: EVWATFSPGIMKVPSSKSHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...GCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCCTCAAGCGATCTGCCTaGCTCGGCCCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPLKRSA*LGPTEC
Trigger: GCACTCTGTGGGGCCGAGGCAGGCAGATCGCTTGAG...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GHCVGVEEEILVIHVCGIIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: GSHAGFFTHWPCNTQQVTIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACCTGCGCGGCTCAATTaGCTTCTGCTGGTGGAAGGT +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAPARLN*LLLVEG
Trigger: ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: HLASNPGADTHSSVALVTPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACGTGCCTGCAGGAGCCTaGGTTTCGATTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: PDYPRFPCRLLHSLAMQHVPAGA*VSIQGL
Trigger: CAGACCTTGAATCGAAACCCAGGCTCCTGCAGGCAC...GTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGGTGCCTGCAGGAGCCTaGGTTTCGATTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: HLASNPGADTHSSVALVTVPAGA*VSIQGL
Trigger: CAGACCTTGAATCGAAACCCAGGCTCCTGCAGGCAC...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGGTGCCTGCAGGAGCCTaGGTTTCGATTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRVPAGA*VSIQGL
Trigger: CAGACCTTGAATCGAAACCCAGGCTCCTGCAGGCAC...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGTCTGTCATAGCTTCCTaGGGTGGAGGGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQSVIAS*GGGKVT
Trigger: GGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGA...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGCCAGCTGGCCCATCTaGGTGTGCACAAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSASWPI*VCTNQS
Trigger: GGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGC...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGGGGGGCAGGAGGAAGTaGCTTCCTTGGTGGTTATTC +
Preference number: 4 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRGGRRK*LPWWLF
Trigger: GAATAACCACCAAGGAAGCCACTTCCTCCTGCCCCC...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGGGGGGCAGGAGGAAGTaGCTTCCTTGGTGGTTATTC +
Preference number: 4 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQGGRRK*LPWWLF
Trigger: GAATAACCACCAAGGAAGCCACTTCCTCCTGCCCCC...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTCTCTGTCCCCCGAGGTaGGATCCCCTGAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: PPDAMVWGHGRNVKAFRSLCPPR*DPLSDL
Trigger: AAGATCACTCAGGGGATCCCACCTCGGGGGACAGAG...ACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGCTCTGTCCCCCGAGGTaGGATCCCCTGAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: ATFSPGIMKVPSSKSFTMLCPPR*DPLSDL
Trigger: AAGATCACTCAGGGGATCCCACCTCGGGGGACAGAG...CATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCACCCAGGGGCAAAGGGTaGCGGTTGTTGGTACTCCTC +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSPRGKG*RLLVLL
Trigger: GAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGG...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GAGGTGTGGGCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCCCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: EVWATFSPGIMKVPSSKSPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...GCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR TCA 90 bp CTGGCCTCAGATAAAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: LASDKTCHYGQKLHSLLGSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...GCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp AGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGTCTGCTGGTGGAAGGTaGCCAGGGCGTCCAGCGAGG +
Preference number: 4 (lower is better)
Translates to: SAGTDPKNIFIPFPGFPKSAGGR*PGRPAR
Trigger: CCTCGCTGGACGCCCTGGTCACCTTCCACCAGCAGA...CTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGTCTCGGGGAGCATTTTaGGGCTCCTCCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: HLASNPGADTHSSVALVTSRGAF*GSSRVS
Trigger: AGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGA...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTACGAGGTGGGATCCCCTaGGTGATCTTGGCTGCCTTT +
Preference number: 4 (lower is better)
Translates to: VPMQASSLTGHATPSRLLRGGIP*VILAAF
Trigger: AAAGGCAGCCAAGATCACTCAGGGGATCCCACCTCG...TAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR TCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCAGCTCACCCCATGGGTaGGTGCAGGAACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPSSPHG*VQEQTP
Trigger: TGGGGTCTGTTCCTGCACTCACCCATGGGGTGAGCT...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCCAGGCTGGACTGCAGTaGTGCGATCTCGGCTCACTG +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPQAGLQ*CDLGSL
Trigger: CAGTGAGCCGAGATCGCATCACTGCAGTCCAGCCTG...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGAGCTGCTTTGGGCTCTaGGGAGACACTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: GIMKVPSSKSFTMKWQQLSCFGL*GDTAGA
Trigger: AGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCT...CAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATCGGGATCCTTCTGCCTaGAGGGCTGTGTCAGCAGCT +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHRDPSA*RAVSAA
Trigger: AGCTGCTGACACAGCCCTGCAGGCAGAAGGATCCCG...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCATTTGCGGGATCCTTCTaGCTGCAGGGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSFAGSF*LQGCVS
Trigger: GCTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAA...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTATGGCCCATCTGGGTGTaGACAAACCAGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: VPMQASSLTGHATPSRLLWPIWV*TNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCA...TAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATTCTGCCAAGCCCTGGTaGTCTGGCTTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHSAKPW*SGLDSW
Trigger: CCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGA...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCGTCGTTCTCAGGCTCTaGCAAGCCCTGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGVVLRL*QALVLW
Trigger: CCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGAC...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGTCGTTCTCAGGCTCTaGCAAGCCCTGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHVVLRL*QALVLW
Trigger: CCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGAC...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTACTGCAGTCTTGAACTaGTGGACTCAAGTGATCCTC +
Preference number: 4 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVTAVLN*WTQVIL
Trigger: GAGGATCACTTGAGTCCAGCAGTTCAAGACTGCAGT...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp AGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTGCGGAGACACTGCGGGAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: SFTMKWQQLLWALRRHCGSFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...CCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: PPDAMVWGHGRNVKAFRSSIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...ACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCATCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLASIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCTTCCTTTCCTTTGATTGGTGACACAGGACTGGCTTTGGGGAGGCCTCCTCAGCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: ASFPLIGDTGLALGRPPQPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...CTGAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAGGAGGGAAGGTCACCTaGGAGACCCTTGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRGGKVT*ETLGWP
Trigger: CGGCCATCCAAGGGTCTCCCAGGTGACCTTCCCTCC...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATGCCAGCTGGCCCATCTaGGTGTGCACAAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHASWPI*VCTNQS
Trigger: GGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGC...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCGTCTTGGGCCAGCTaGCCCATCTGGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTPSWAS*PIWVCT
Trigger: TGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGG...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGTGCTGCCGGACCCTCTaGCCTCTCTCGGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPCCRTL*PLSGSI
Trigger: AATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCA...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCGGCCTGAGATCACCGTaGATCTCCGGACATCCAAGA +
Preference number: 4 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPGLRSP*ISGHPR
Trigger: TCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCC...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AGGGCTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGTCTCGGCCTTCCTGGTaGGGACCTTTCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: RALTTIWCQLLSPGVTSMSRPSW*GPFCLL
Trigger: CAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGA...CATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGTCTGGCTTGGACTCCTaGGAGGATAGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWSGLDS*EDRALT
Trigger: AGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGA...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAGGCTCTGCCAAGCCCTaGTGCTCTGGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRGSAKP*CSGLDS
Trigger: GGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCC...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHDPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCGACCCCCGGATGCCATaGTGTGGGGCCATGGAAGAA +
Preference number: 4 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGDPRMP*CGAMEE
Trigger: TTCTTCCATGGCCCCACACCATGGCATCCGGGGGTC...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
3UTR CAA 72 bp CGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTaGCGGGATCCTTCTGCCTGCAGGGCTGTGTCAGCA +
Preference number: 4 (lower is better)
Translates to: RWSRGRDPRNPR*RDPSACRAVSA
Trigger: TGCTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGCCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CTCACTGGCCATGCAACACCCAGCAGGTTACTAACCTCGCTGTGCCTCAGTTTCCGGCTTCCTTTCCTTTaGTTGGTGACACAGGACTGG +
Preference number: 4 (lower is better)
Translates to: LTGHATPSRLLTSLCLSFRLPFL*LVTQDW
Trigger: CCAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCG...GAAACTGAGGCACAGCGAGGTTAGTAACCTGCTGGGTGTTGCATGGCCAGTGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR TCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCTCTCGGGGAGCATTTTaGGGCTCCTCCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPSRGAF*GSSRVS
Trigger: AGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGA...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGCTGTGAGGGGCTTTTaGGAGATGTGGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHAVRGF*EMWPHR
Trigger: CCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGC...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGATCACCTCAATGCAGCTaGCCGACCTCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRSPQCS*PTSRPS
Trigger: GGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGA...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCCTGGTCTCGAACTCCTaGCCTCAAGCGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGLVSNS*PQAICL
Trigger: CAGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAG...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp ATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGACACACCACCACACCTaGCTGTTGTTACAACTCATT +
Preference number: 4 (lower is better)
Translates to: MLRHSGVWQPLAASPRARTHHHT*LLLQLI
Trigger: AATGAGTTGTAACAACAGTCAGGTGTGGTGGTGTGT...CCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR GCA 90 bp GGAAATCTAGGGGCAGGGCACACAGTTTGTGCAAAGGACCTGAGGTGGGGCCGGAGCCTCAGTTACTGCTaGTTTCTGAGAAGCTATGAC +
Preference number: 4 (lower is better)
Translates to: GNLGAGHTVCAKDLRWGRSLSYC*FLRSYD
Trigger: GTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCT...CCGGCCCCACCTCAGGTCCTTTGCACAAACTGTGTGCCCTGCCCCTAGATTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR GCA 90 bp CTGAGAAGCTATGACATGAAGCACCCCTTGCCCCCTCCAAGGAAACCCAAGAGCTACCCCAGGTTCCCATaGAGGCTTCTTCACTCACTG +
Preference number: 4 (lower is better)
Translates to: LRSYDMKHPLPPPRKPKSYPRFP*RLLHSL
Trigger: CAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTA...GCTCTTGGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp CCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTGCGGTACCCCAGGTTCCCATaGAGGCTTCTTCACTCACTG +
Preference number: 4 (lower is better)
Translates to: PSSKSFTMKWQQLLWALRYPRFP*RLLHSL
Trigger: CAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTA...CCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACAGCTGCTTTGGGCTCTaGGGAGACACTGCGGGGGCT +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDSCFGL*GDTAGA
Trigger: AGCCCCCGCAGTGTCTCCGCAGAGCCCAAAGCAGCT...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATTTTGCGGGATCCTTCTaGCTGCAGGGCTGTGTCAGC +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHFAGSF*LQGCVS
Trigger: GCTGACACAGCCCTGCAGGCAGAAGGATCCCGCAAA...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACTCGTAATCCACGTTTaGGGGATCCTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLALVIHV*GILLPA
Trigger: TGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATTGGCCCATCTGGGTGTaGACAAACCAGTCCAGCCGT +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHWPIWV*TNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCA...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATTGGCTTTTTAGCTGCTaGCGGACCCTCTGGCCTCTC +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHWLFSC*RTLWPL
Trigger: GAGAGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCA...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGTCTGCCAAGCCCTGGTaGTCTGGCTTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPSAKPW*SGLDSW
Trigger: CCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGA...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCGTCGTTCTCAGGCTCTaGCAAGCCCTGGTGCTCTGG +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTVVLRL*QALVLW
Trigger: CCAGAGCACCAGGGCTTGGCAGAGCCTGAGAACGAC...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCTCGGCCCCACAGAGTaGTGGGACTACAGGCATGAG +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTLGPTE*WDYRHE
Trigger: CTCATGCCTGTAGTCCCAGCACTCTGTGGGGCCGAG...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp AGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGCTCAAGCGATCTGCCTaGCTCGGCCCCACAGAGTGC +
Preference number: 4 (lower is better)
Translates to: SAGTDPKNIFIPFPGFPKLKRSA*LGPTEC
Trigger: GCACTCTGTGGGGCCGAGGCAGGCAGATCGCTTGAG...CTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGCAAGTCCCCAGCCCTTaGGCCGGCAGCGTCACTGCT +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWQVPSP*AGSVTA
Trigger: AGCAGTGACGCTGCCGGCCCAAGGGCTGGGGACTTG...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp ACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTaGGCTCTGCGGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: TFSPGIMKVPSSKSFTMKWQQLL*ALRRHC
Trigger: GCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCA...TTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: HLASNPGADTHSSVALVTSFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: SFTHCLASSSRSQIHSLSSIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...ACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTACCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: VPMQASSLTGHATPSRLLPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...TAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGGCCAGCTGGCCCATCTaGGTGTGCACAAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPASWPI*VCTNQS
Trigger: GGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGC...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCGTCTTGGGCCAGCTaGCCCATCTGGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDPSWAS*PIWVCT
Trigger: TGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGG...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TTTCCCCCATTTATAACACAGGAGTACAAAGGCTGGCCTCAGATAAAACATGCCTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGG +
Preference number: 4 (lower is better)
Translates to: FPPFITQEYKGWPQIKHASGTPS*ASWPIW
Trigger: CCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGA...GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTGTGTTATAAATGGGGGAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTCTTGAGATTGCACCATaGAACCACTCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSLEIAP*NHSGTP
Trigger: CGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAG...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTAGAAGGAGCCTCCTCTaGAAGCTGTTGACCACCTCC +
Preference number: 4 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPRRSLL*KLLTTS
Trigger: GGAGGTGGTCAACAGCTTCCAGAGGAGGCTCCTTCT...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp CAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGAAGTGGCTTCCTTGGTaGTTATTCTGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QGCVSSSLRGSIGFCWWKKWLPW*LFCSSL
Trigger: CAGAGATGAACAGAATAACCACCAAGGAAGCCACTT...CTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp ACCCAGGGGCAAAGGGTGGCGGTTGTTGGTACTCCTCCGGGAGCTGGTCGTTCTAGGAAGTGGCTTCCTTaGTGGTTATTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: TQGQRVAVVGTPPGAGRSRKWLP*WLFCSS
Trigger: AGATGAACAGAATAACCACCAAGGAAGCCACTTCCT...AGAACGACCAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCCCCTGGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp AGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGTGCTGCCGGACCCTCTaGCCTCTCTCGGGGAGCATT +
Preference number: 4 (lower is better)
Translates to: SAGTDPKNIFIPFPGFPKCCRTL*PLSGSI
Trigger: AATGCTCCCCGAGAGAGGCCAGAGGGTCCGGCAGCA...CTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CTCACTGGCCATGCAACACCCAGCAGGTTACTAACCTCGCTGTGCCTCAGTTTCTCTCGGCCTTCCTGGTaGGGACCTTTCTGTCTTTTG +
Preference number: 4 (lower is better)
Translates to: LTGHATPSRLLTSLCLSFSRPSW*GPFCLL
Trigger: CAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGA...GAAACTGAGGCACAGCGAGGTTAGTAACCTGCTGGGTGTTGCATGGCCAGTGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGGCTCTGCCAAGCCCTaGTGCTCTGGCTTGGACTCC +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEGSAKP*CSGLDS
Trigger: GGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGAGCC...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: KHATTDKSFTHCLASSSRRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp GGTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCAGGCATTCAGGAGTGTaGCAGCCCCTGGCAGCGAGT +
Preference number: 4 (lower is better)
Translates to: GECRNRPQKHLYSISRVPRHSGV*QPLAAS
Trigger: ACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCT...GGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCACC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAPDAMV*GHGRNV
Trigger: AACATTTCTTCCATGGCCCCACACCATGGCATCCGG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCCTCTGTCATCCAGGCTaGACTGCAGTGATGCGATCT +
Preference number: 4 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPLCHPG*TAVMRS
Trigger: AGATCGCATCACTGCAGTCCAGCCTGGATGACAGAG...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWAGSQWL*LQQVLS
Trigger: GCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCC...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp GGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTCTCAGCATCCTCTCTTaGGATTGCACCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: GSHAGFFTHWPCNTQQVTLSILS*DCTMEP
Trigger: TGGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAG...AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR TCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACTCAGCATCCTCTCTTaGGATTGCACCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLALSILS*DCTMEP
Trigger: TGGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGGTGGGATCCCCTGAGTaGTCTTGGCTGCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPVGSPE*SWLPFP
Trigger: CGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCAC...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCGTGGGATCCCCTGAGTaGTCTTGGCTGCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTVGSPE*SWLPFP
Trigger: CGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCAC...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCGCTGTGAGGGGCTTTTaGGAGATGTGGCCACACAGG +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTAVRGF*EMWPHR
Trigger: CCTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGC...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACAGCTCACCCCATGGGTaGGTGCAGGAACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDSSPHG*VQEQTP
Trigger: TGGGGTCTGTTCCTGCACTCACCCATGGGGTGAGCT...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACAGCCTCTTATCCTCTCTaGACCTCAGTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: ARLPQVPMQASSLTGHATASYPL*TSVSSS
Trigger: TGAAGAAGAGACTGAGGTTCAGAGAGGATAAGAGGC...TGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR TCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGCTGGTCTCGAACTCCTaGCCTCAAGCGATCTGCCTG +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPLVSNS*PQAICL
Trigger: CAGGCAGATCGCTTGAGGTCAGGAGTTCGAGACCAG...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTAGCTGTGCCAGTGCCTaGAGGAGCCTGGGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWASCASA*RSLGFD
Trigger: ATCGAAACCCAGGCTCCTGCAGGCACTGGCACAGCT...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGCTGTGCCAGTGCCTaGAGGAGCCTGGGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRSCASA*RSLGFD
Trigger: ATCGAAACCCAGGCTCCTGCAGGCACTGGCACAGCT...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCAGCTGTGCCAGTGCCTaGAGGAGCCTGGGTTTCGAT +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTSCASA*RSLGFD
Trigger: ATCGAAACCCAGGCTCCTGCAGGCACTGGCACAGCT...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp GGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGGTGTCAGCAGCTCCCTaGGCGGCTCAATTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GIMKVPSSKSFTMKWQQLVSAAP*AAQLAS
Trigger: AGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACAC...CAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTTCCTCGGCCACTaGGTTGGAGTAGAGGAAGAG +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHSFLGH*VGVEEE
Trigger: CTCTTCCTCTACTCCAACGCAGTGGCCGAGGAAGCT...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTGGCTTTTTAGCTaGTGCCGGACCCTCTGGCCT +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRRWLFS*CRTLWP
Trigger: AGGCCAGAGGGTCCGGCAGCAGCTAAAAAGCCACCT...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACTCTGCCAAGCCCTGGTaGTCTGGCTTGGACTCCTGG +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDSAKPW*SGLDSW
Trigger: CCAGGAGTCCAAGCCAGAGCACCAGGGCTTGGCAGA...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp CTTCCTTGGTGGTTATTCTGTTCATCTCTGCTGACGGCTTCCTTTCCTTTGATTCCGAAGACCCCCGGATaGCATGGTGTGGGGCCATGG +
Preference number: 4 (lower is better)
Translates to: LPWWLFCSSLLTASFPLIPKTPG*HGVGPW
Trigger: CCATGGCCCCACACCATGGCATCCGGGGGTCTTCGG...AATCAAAGGAAAGGAAGCCGTCAGCAGAGATGAACAGAATAACCACCAAGGAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR GCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLALMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCTCAGATAAAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTAGCGGAGGGAAGGTCACCTaGGAGACCCTTGGATGGCCG +
Preference number: 4 (lower is better)
Translates to: PQIKHATTDKSFTHCLASGGKVT*ETLGWP
Trigger: CGGCCATCCAAGGGTCTCCCAGGTGACCTTCCCTCC...GCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCTCTGTCATAGCTTCCTaGGGTGGAGGGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPSVIAS*GGGKVT
Trigger: GGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGA...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGCCAGCTGGCCCATCTaGGTGTGCACAAACCAGTCC +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEASWPI*VCTNQS
Trigger: GGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGC...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGCCGTCTTGGGCCAGCTaGCCCATCTGGGTGTGCACA +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWPSWAS*PIWVCT
Trigger: TGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGG...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTTTGGTGACACAGGACTaGCTTTGGGGAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWALVTQD*LWGGLL
Trigger: GAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAA...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGCCTGAGATCACCGTaGATCTCCGGACATCCAAGA +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHGLRSP*ISGHPR
Trigger: TCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCC...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTTCTACCTCTCGGCCTTCCTaGTGGGGACCTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: LRWSRGRDPRNPRLRDPSTSRPS*WGPFCL
Trigger: AAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGT...AGAAGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATTCTGGCTTGGACTCCTaGGAGGATAGGGCTCTCACT +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHSGLDS*EDRALT
Trigger: AGTGAGAGCCCTATCCTCCCAGGAGTCCAAGCCAGA...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGTCCTAGGGAATGACTaGACCTGGGTGTGGTCTTGG +
Preference number: 4 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHVLGND*TWVWSW
Trigger: CCAAGACCACACCCAGGTCCAGTCATTCCCTAGGAC...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR TCA 90 bp AAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTCCGGACATCCAAGAGTaGCGACAAGTTCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: KHATTDKSFTHCLASSSRPDIQE*RQVHSG
Trigger: GCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGG...ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR TCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGTGGGATCCCCTGAGTaGTCTTGGCTGCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEVGSPE*SWLPFP
Trigger: CGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCAC...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACGTGGGATCCCCTGAGTaGTCTTGGCTGCCTTTTCCG +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDVGSPE*SWLPFP
Trigger: CGGAAAAGGCAGCCAAGATCACTCAGGGGATCCCAC...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGAGCTCACCCCATGGGTaGGTGCAGGAACAGACCCCA +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWSSPHG*VQEQTP
Trigger: TGGGGTCTGTTCCTGCACTCACCCATGGGGTGAGCT...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCATCCAAGGCTGTCTCTTaGGATTGCACCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSSKAVS*DCTMEP
Trigger: TGGTTCCATGGTGCAATCTCAAGAGACAGCCTTGGA...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGTTACTAACCTCGCTGTaGCTCAGTTTCCCCCATTTA +
Preference number: 4 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRLLTSL*LSFPHL
Trigger: TAAATGGGGGAAACTGAGGCACAGCGAGGTTAGTAA...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCTCACTACCATTTGGTaGCAACTCCTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTLTTIW*QLLSPG
Trigger: CCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAG...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCCACCCCATGGGTGAGTaGAGGAACAGACCCCAAAAA +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPHPMGE*RNRPQK
Trigger: TTTTTGGGGTCTGTTCCTGCACTCACCCATGGGGTG...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 23 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCACTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSLMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CATTGCTTGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTCAGTTACTGCTGCCAGGAGTACAAAGGCTaGCCTCAGATAAAACATGCC +
Preference number: 4 (lower is better)
Translates to: HCLASSSRSQIHSLSYCCQEYKG*PQIKHA
Trigger: GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTG...GCAGCAGTAACTGAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCACAGGAGTACAAAGGCTaGCCTCAGATAAAACATGCC +
Preference number: 4 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAQEYKG*PQIKHA
Trigger: GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTG...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGGCAGCAGCTGCTTTaGGCTCTGCGGAGACACTGC +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWWQQLL*ALRRHC
Trigger: GCAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCA...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPSFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000591154.1
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp GGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGTCAATTGGCTTCTGCTaGTGGAAGGTGACCAGGGCG +
Preference number: 4 (lower is better)
Translates to: GIMKVPSSKSFTMKWQQLSIGFC*WKVTRA
Trigger: CGCCCTGGTCACCTTCCACCAGCAGAAGCCAATTGA...CAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGCCTCGGCCACTGCGTTaGAGTAGAGGAAGAGATCCT +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPPRPLR*SRGRDP
Trigger: AGGATCTCTTCCTCTACTCCAACGCAGTGGCCGAGG...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGCATAGCTTCCTGGGGTaGAGGGAAGGTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: HESPIIQELHHEMAAAALHSFLG*REGHLG
Trigger: TCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATG...CAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGACGACAAGTTCACAGTaGCGAGGTGGCTTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWTTSSQ*RGGFLA
Trigger: AGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGT...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAACCTCTCGGCCTTCCTaGTGGGGACCTTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRTSRPS*WGPFCL
Trigger: AAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGT...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPALTTI*CQLLSP
Trigger: AGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGC...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGALTTI*CQLLSP
Trigger: AGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGC...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATCCGGATGCCATGGTGTaGGGCCATGGAAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHPDAMV*GHGRNV
Trigger: AACATTTCTTCCATGGCCCCACACCATGGCATCCGG...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCAACAAACAGATGATATaGGAAAAGGGCTCGGATTCA +
Preference number: 4 (lower is better)
Translates to: QLTDLSAFLVGTFLSFGANKQMI*EKGSDS
Trigger: TGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT...GGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CCA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGGGGAATGACTGGACCTaGGTGTGGTCTTGGGAAGGA +
Preference number: 4 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPGNDWT*VWSWEG
Trigger: TCCTTCCCAAGACCACACCCAGGTCCAGTCATTCCC...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCACTGGATGCTTCTGTCTaGTTGCCTCTGGACTTCACT +
Preference number: 4 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSLDASV*LPLDFT
Trigger: AGTGAAGTCCAGAGGCAACCAGACAGAAGCATCCAG...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGACTGTGAGAGGATTCTaGATGCTTCTGTCTGGTTGC +
Preference number: 4 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWTVRGF*MLLSGC
Trigger: GCAACCAGACAGAAGCATCCAGAATCCTCTCACAGT...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR TCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCCCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
51% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTTCTCCCCGGGGATCATaGAAGTCCCATCATCCAAGA +
Preference number: 4 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWASPRGS*KSHHPR
Trigger: TCTTGGATGATGGGACTTTCATGATCCCCGGGGAGA...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp TTTCCCCCATTTATAACACAGGAGTACAAAGGCTGGCCTCAGATAAAACATGCCTCACCTCAATGCAGCTaGCCGACCTCTCGGCCTTCC +
Preference number: 4 (lower is better)
Translates to: FPPFITQEYKGWPQIKHASPQCS*PTSRPS
Trigger: GGAAGGCCGAGAGGTCGGTCAGCTGCATTGAGGTGA...GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTGTGTTATAAATGGGGGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR GCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGGCTCAATTGGCTTCTaGTGGTGGAAGGTGACCAGG +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEGSIGF*WWKVTR
Trigger: CCTGGTCACCTTCCACCAGCAGAAGCCAATTGAGCC...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGACTCGTAATCCACGTTTaGGGGATCCTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRLVIHV*GILLPA
Trigger: TGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAG...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGATTGGCTTCTGCTGGTaGAAGGTGACCAGGGCGTCC +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWIGFCW*KVTRAS
Trigger: GGACGCCCTGGTCACCTTCCACCAGCAGAAGCCAAT...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGTGCCTGCAGGAGCCTaGGTTTCGATTCAAGGTCTG +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEVPAGA*VSIQGL
Trigger: CAGACCTTGAATCGAAACCCAGGCTCCTGCAGGCAC...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGCATAGCTTCCTGGGGTaGAGGGAAGGTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWHSFLG*REGHLG
Trigger: TCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATG...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGTTTAAAGCACCAAGCTGTAGGATCGCATTCTCATTCTAGAAGGAGCCTCCTCTCTGTCATAGCTTCCTaGGGTGGAGGGAAGGTCACC +
Preference number: 4 (lower is better)
Translates to: GLKHQAVGSHSHSRRSLLSVIAS*GGGKVT
Trigger: GGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGA...GAGGAGGCTCCTTCTAGAATGAGAATGCGATCCTACAGCTTGGTGCTTTAAACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTTGGTGACACAGGACTaGCTTTGGGGAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWLVTQD*LWGGLL
Trigger: GAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAA...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGAGGAAGTGGCTTCCTTaGTGGTTATTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: HLASNPGADTHSSVALVTRKWLP*WLFCSS
Trigger: AGATGAACAGAATAACCACCAAGGAAGCCACTTCCT...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGAGGAAGTGGCTTCCTTaGTGGTTATTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRRKWLP*WLFCSS
Trigger: AGATGAACAGAATAACCACCAAGGAAGCCACTTCCT...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAATGGCAGCAGCTGCTTTaGGCTCTGCGGAGACATTGT +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEWQQLL*ALRRHC
Trigger: ACAATGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCA...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR CCA 90 bp AGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGGGCCTGAGATCACCGTaGATCTCCGGACATCCAAGA +
Preference number: 4 (lower is better)
Translates to: SAGTDPKNIFIPFPGFPKGLRSP*ISGHPR
Trigger: TCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCC...CTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCCTCTGTCATCCAGGCTaGACTGCAGTGATGCGATCT +
Preference number: 4 (lower is better)
Translates to: GECRNRPQKHLYSISRVPLCHPG*TAVMRS
Trigger: AGATCGCATCACTGCAGTCCAGCCTGGATGACAGAG...GGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATGCAGTCTTGAACTGCTaGACTCAAGTGATCCTCCTG +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHAVLNC*TQVILL
Trigger: CAGGAGGATCACTTGAGTCCAGCAGTTCAAGACTGC...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616645.4
3UTR CAA 72 bp AAACATGCCACTACGGACAAAAGCTTCACTCATTGCTaGGCTAGCAGCTCCCGTTCTCAGATCCACAGCCTC +
Preference number: 4 (lower is better)
Translates to: KHATTDKSFTHC*ASSSRSQIHSL
Trigger: GAGGCTGTGGATCTGAGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR TCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATGGATCCCAGTGGCTGTaGCTCCAGCAAGTTCTCAGC +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHGSQWL*LQQVLS
Trigger: GCTGAGAACTTGCTGGAGTCACAGCCACTGGGATCC...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGACCAAGAGCTTCACCATaGAATGGCAGCAGCTGCTTT +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRPRASP*NGSSCF
Trigger: AAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGG...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GGTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCCTCAGCATCCTCTCTTaGGATTGCACCATGGAACCA +
Preference number: 4 (lower is better)
Translates to: GECRNRPQKHLYSISRVPLSILS*DCTMEP
Trigger: TGGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAG...GGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR TCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGCCGGACATCCAAGAGTaGCGACAAGTTCACAGTGGC +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWPDIQE*RQVHSG
Trigger: GCCACTGTGAACTTGTCGTCACTCTTGGATGTCCGG...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGCCTCTTATCCTCTCTaGACCTCAGTCTCTTCTTCA +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPASYPL*TSVSSS
Trigger: TGAAGAAGAGACTGAGGTTCAGAGAGGATAAGAGGC...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp AAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTTTCACTCACTGGCCATaGAACACCCAGCAGGTTACT +
Preference number: 4 (lower is better)
Translates to: KHATTDKSFTHCLASSSRFTHWP*NTQQVT
Trigger: AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAA...ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTTTCACTCACTGGCCATaGAACACCCAGCAGGTTACT +
Preference number: 4 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWAFTHWP*NTQQVT
Trigger: AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAA...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGCTCACTACCATTTGGTaGCAACTCCTGTCCCCTGGG +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWLTTIW*QLLSPG
Trigger: CCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAG...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTTTCGATTCAAGGTCTaGACGTCAATGGGGCGGGGC +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWFRFKV*TSMGRG
Trigger: GCCCCGCCCCATTGACGTGCAGACCTTGAATCGAAA...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCATAGCTTCCTGGGGTaGAGGGAAGGTCACCTGGGA +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHHSFLG*REGHLG
Trigger: TCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCTTGAGATTGCACCATaGAACCACTCGGGGACCCCG +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHLEIAP*NHSGTP
Trigger: CGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATTTGGTGACACAGGACTaGCTTTGGGGAGGCCTCCTC +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHLVTQD*LWGGLL
Trigger: GAGGAGGCCTCCCCAAAGCCAGTCCTGTGTCACCAA...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCACGACAAGTTCACAGTaGCGAGGTGGCTTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPTTSSQ*RGGFLA
Trigger: AGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGT...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCTCTGTCCCCCGAGGTaGGATCCCCTGAGTGATCTT +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHLCPPR*DPLSDL
Trigger: AAGATCACTCAGGGGATCCCACCTCGGGGGACAGAG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACGCTCTCACTACCATTTaGTGCCAACTCCTGTCCCCT +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDALTTI*CQLLSP
Trigger: AGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGC...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp AAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTAGCAGCTCCCGTAAAAGCTTCACTCATTaGTTGGCTAGCAGCTCCCGT +
Preference number: 4 (lower is better)
Translates to: KHATTDKSFTHCLASSSRKSFTH*LASSSR
Trigger: ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTT...ACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp GTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTAGCCTCAGATAAAACATaGCACTACGGACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: VPMQASSLTGHATPSRLLASDKT*HYGQKL
Trigger: AAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGC...TAGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCT +
Preference number: 4 (lower is better)
Translates to: ECRNRPQKHLYSISRVPESFTMK*QQLLWA
Trigger: AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCT...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCGTGTTGCAAAAGCACTaGAAAGGTTTAAAGCACCAA +
Preference number: 4 (lower is better)
Translates to: GHCVGVEEEILVIHVCGIVLQKH*KGLKHQ
Trigger: TTGGTGCTTTAAACCTTTCCAGTGCTTTTGCAACAC...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTAGGAAGTGGCTTCCTTaGTGGTTATTCTGTTCATCT +
Preference number: 4 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPRKWLP*WLFCSS
Trigger: AGATGAACAGAATAACCACCAAGGAAGCCACTTCCT...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAACGACAAGTTCACAGTaGCGAGGTGGCTTTTTAGCT +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRTTSSQ*RGGFLA
Trigger: AGCTAAAAAGCCACCTCGCCACTGTGAACTTGTCGT...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATGGCCTGAGATCACCGTaGATCTCCGGACATCCAAGA +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHGLRSP*ISGHPR
Trigger: TCTTGGATGTCCGGAGATCCACGGTGATCTCAGGCC...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATTCTCGGGGAGCATTTTaGGGCTCCTCCAGAGTTTCT +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHSRGAF*GSSRVS
Trigger: AGAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGA...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp ACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAACACAGCCTCAGTTACTaGTGCTTTCTGAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: TFSPGIMKVPSSKSFTMKHSLSY*CFLRSY
Trigger: ATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTG...TTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCTCGTAATCCACGTTTaGGGGATCCTTCTGCCTGCA +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHLVIHV*GILLPA
Trigger: TGCAGGCAGAAGGATCCCGCAAACGTGGATTACGAG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACTCACTCAGGCTGGAGTaGAGTGGTATGATCATAGCT +
Preference number: 4 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDSLRLE*SGMIIA
Trigger: AGCTATGATCATACCACTGCACTCCAGCCTGAGTGA...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CCA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATAAGTGGCTTCCTTGGTaGTTATTCTGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: YGKRARIHLASNPGADTHKWLPW*LFCSSL
Trigger: CAGAGATGAACAGAATAACCACCAAGGAAGCCACTT...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR TCA 90 bp CCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCTCCTCAGATTGTAGTTTaGATTTTAATCTCGGTGTTG +
Preference number: 4 (lower is better)
Translates to: PLRWSRGRDPRNPRLRDPPQIVV*ILISVL
Trigger: CAACACCGAGATTAAAATTCAAACTACAATCTGAGG...AGGATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR GCA 90 bp CAGATCCACAGCCTCAGTTACTGCTGCTTTCTGAGAAGCTATGACATGAAGCACCACAGCCTCAGTTACTaGTGCTTTCTGAGAAGCTAT +
Preference number: 4 (lower is better)
Translates to: QIHSLSYCCFLRSYDMKHHSLSY*CFLRSY
Trigger: ATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTG...GTGCTTCATGTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTGGATCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR GCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCTGATGTATAGCTGGTaGCCCAAACCATCAGCGTCA +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHLMYSW*PKPSAS
Trigger: TGACGCTGATGGTTTGGGGCACCAGCTATACATCAG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCAACAAACAGATGATATaGGAAAAGGGCTCGGATTCA +
Preference number: 4 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPNKQMI*EKGSDS
Trigger: TGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCTCTTCTTCAAAACATaGAGGATGACCCTCCCTGAG +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHLFFKT*RMTLPE
Trigger: CTCAGGGAGGGTCATCCTCCATGTTTTGAAGAAGAG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAACAAACAGATGATATaGGAAAAGGGCTCGGATTCA +
Preference number: 4 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRNKQMI*EKGSDS
Trigger: TGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CCA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGAAGTGGCTTCCTTGGTaGTTATTCTGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWKWLPW*LFCSSL
Trigger: CAGAGATGAACAGAATAACCACCAAGGAAGCCACTT...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR GCA 90 bp TTTCCCCCATTTATAACACAGGAGTACAAAGGCTGGCCTCAGATAAAACATGCCGCCTCAGATAAAACATaGCACTACGGACAAAAGCTT +
Preference number: 4 (lower is better)
Translates to: FPPFITQEYKGWPQIKHAASDKT*HYGQKL
Trigger: AAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGC...GGCATGTTTTATCTGAGGCCAGCCTTTGTACTCCTGTGTTATAAATGGGGGAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CCA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATAAGTGGCTTCCTTGGTaGTTATTCTGTTCATCTCTG +
Preference number: 4 (lower is better)
Translates to: QTISVTLMIVAKITSSPHKWLPW*LFCSSL
Trigger: CAGAGATGAACAGAATAACCACCAAGGAAGCCACTT...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CGGGATCCTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTCCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: RDPACRAVSAAPCAAQLAPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...AGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGGATCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591154.1
ENST00000613195.4
CDS-3UTR CAA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: SGVWQPLAASPRARVDLFGKGWR*LVLLRE
Trigger: CTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCC...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS CCA 90 bp ATGGCCGAGGCCCTCGCTGTAGCTGTGCCAGTGCCTGCAGGAGCCTaGGTTTCGATTCAAGGTCTGCACGTCAATGGGGCGGGGCTGGCT +
Preference number: 5 (lower is better)
Translates to: MAEALAVAVPVPAGA*VSIQGLHVNGAGLA
Trigger: AGCCAGCCCCGCCCCATTGACGTGCAGACCTTGAATCGAAACCCAGGCTCCTGCAGGCACTGGCACAGCTACAGCGAGGGCCTCGGCCAT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CAA 90 bp CTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGATGGCAGCAGCTGCTTaGGGCTCTGCGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: LPAGLCQQLPARLNWLLLMAAAA*GSAETL
Trigger: CAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCAT...CAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp CTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCAGCCTCGGGGACCCCGTCTaGGGCCAGCTGGCCCATCTG +
Preference number: 5 (lower is better)
Translates to: LSLPFGANSCPLGSPQCSLGDPV*GQLAHL
Trigger: CAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAG...GCTGCATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CAA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCTCGGGGACCCCGTCTaGGGCCAGCTGGCCCATCTG +
Preference number: 5 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRLGDPV*GQLAHL
Trigger: CAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAG...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGCCTCGTAATCCACGTTaGCGGGATCCTGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: LQGCVSSSLRGSIGFCWWPRNPR*RDPACR
Trigger: CCTGCAGGCAGGATCCCGCAAACGTGGATTACGAGG...CCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000591154.1
ENST00000613195.4
CDS GCA 90 bp AGACCCTTGGATGGCCGAGGCCCTCGCTGTAGCTGTGCCAGTGCCTaGAGGAGCCTGGGTTTCGATTCAAGGTCTGCACGTCAATGGGGC +
Preference number: 5 (lower is better)
Translates to: RPLDGRGPRCSCASA*RSLGFDSRSARQWG
Trigger: GCCCCATTGACGTGCAGACCTTGAATCGAAACCCAGGCTCCTGCAGGCACTGGCACAGCTACAGCGAGGGCCTCGGCCATCCAAGGGTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CAA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCCCAAGTCCCCAGCCCTaGGGCCGGCAGCGTCACTGC +
Preference number: 5 (lower is better)
Translates to: GHCVGVEEEILVIHVCGIPSPQP*GRQRHC
Trigger: GCAGTGACGCTGCCGGCCCAAGGGCTGGGGACTTGG...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp GGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGGTGGAAGGTATGGCAGCAGCTGCTTaGGGCTCTGCGGAGACACTG +
Preference number: 5 (lower is better)
Translates to: GLCQQLPARLNWLLLVEGMAAAA*GSAETL
Trigger: CAGTGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCAT...ACCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGTCACCTGGGAGACCCTaGGATGGCCGAGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRSPGRP*DGRGPR
Trigger: GCGAGGGCCTCGGCCATCCAAGGGTCTCCCAGGTGA...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGGGCTGTGAGGGGCTTTaGAGAGATGTGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: PFPGFPKTPGCHGVGPWKGCEGL*RDVATQ
Trigger: CTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCC...CTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp AAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGAGGCTCTCACTACCATTaGGTGCCAACTCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: KAFRSVAAPGSESQSQGGGSHYH*VPTPVP
Trigger: GGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCC...TCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp TTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCGGCTCTCACTACCATTaGGTGCCAACTCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: LGRQRHCYSQTTPGSHAGGSHYH*VPTPVP
Trigger: GGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCC...GCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CAA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCGCCACTGAGCCCGGCTaGCAGTGTGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: SGVWQPLAASPRARVDLFATEPG*QCAFRQ
Trigger: TTGTCTAAAAGCACACTGCAAGCCGGGCTCAGTGGC...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS CCA 90 bp TCCTCTCTTGAGATTGCACCATGGAACCACTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGGGTGTGCACAAACCAGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: SSLEIAPWNHSGTPS*ASWPIWVCTNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS CCA 90 bp CTGTCTCTTGAGATTGCACCATGGAACCACTCGGGGACCCCGTCTTaGGCCAGCTGGCCCATCTGGGTGTGCACAAACCAGTCCAGCCGT +
Preference number: 5 (lower is better)
Translates to: LSLEIAPWNHSGTPS*ASWPIWVCTNQSSR
Trigger: ACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGACAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CAA 90 bp GTCCCCAGCCCTTGGGCCGGCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTAGCTTCACTCATTGCTaGGCTAGCAGCTCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: VPSPWAGSVTATARLPQVSFTHC*ASSSRS
Trigger: AGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT...AACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGCCGGCCCAAGGGCTGGGGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp CTGAGAAGCTATGACATGAAGCACCCCTTGCCCCCTCCAAGGAAACCCAAGAGCTCACCTGGGAGACCCTaGGATGGCCGAGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: LRSYDMKHPLPPPRKPKSSPGRP*DGRGPR
Trigger: GCGAGGGCCTCGGCCATCCAAGGGTCTCCCAGGTGA...GCTCTTGGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTCATAGCTTCTCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp TGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGTCACCTGGGAGACCCTaGGATGGCCGAGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: WCGAMEEMLRHSGVWQPLSPGRP*DGRGPR
Trigger: GCGAGGGCCTCGGCCATCCAAGGGTCTCCCAGGTGA...CAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACACCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTCTCAGCATCCTCTCTaGAGATTGCACCATGGAACC +
Preference number: 5 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTSQHPL*RLHHGT
Trigger: GGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAGA...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CGGGATCCTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTATGGCAGCAGCTGCTTaGGGCTTTGTAGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: RDPACRAVSAAPCAAQLAMAAAA*GFVGEC
Trigger: ACACTCTCCTACAAAGCCCAAAGCAGCTGCTGCCAT...AGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAGGATCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000591154.1
CDS-3UTR CAA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCATGGCAGCAGCTGCTTaGGGCTTTGTAGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: SGVWQPLAASPRARVDLFMAAAA*GFVGEC
Trigger: ACACTCTCCTACAAAGCCCAAAGCAGCTGCTGCCAT...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCACGGCTTCCTTTCCTTaGATTGGTGACACAGGACTG +
Preference number: 5 (lower is better)
Translates to: GIQECGSPWQRVPEPGWTTASFP*IGDTGL
Trigger: CAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCGT...GGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp TTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAGGCTGTGAGGGGCTTTaGAGAGATGTGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: FHFPGSRRPPDAMVWGHGGCEGL*RDVATQ
Trigger: CTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCC...TCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCATTCATCACCTGGGAGACCCTaGGATGGCCGAGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: EDPRMPWCGAMEEMLRHSSPGRP*DGRGPR
Trigger: GCGAGGGCCTCGGCCATCCAAGGGTCTCCCAGGTGA...TGAATGCCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp TGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTAGCAGTACCCAGGGGCCATCCTCTCTTGAGATaGCACCATGGAACCACTCGG +
Preference number: 5 (lower is better)
Translates to: WQRVPEPGWTCSLAVPRGHPLLR*HHGTTR
Trigger: CCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATG...GCCCCTGGGTACTGCTAGAGAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR CAA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCTCTCAGCATCCTCTCTaGAGATTGCACCATGGAACC +
Preference number: 5 (lower is better)
Translates to: SGVWQPLAASPRARVDLFSQHPL*RLHHGT
Trigger: GGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAGA...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp TCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGGTGGACCTGTTCACGGCTTCCTTTCCTTaGATTGGTGACACAGGACTG +
Preference number: 5 (lower is better)
Translates to: SGVWQPLAASPRARVDLFTASFP*IGDTGL
Trigger: CAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCGT...GAACAGGTCCACCCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCTGGATGGCAGCAGCTGCTTaGGGCTCTGCGGAGACATTG +
Preference number: 5 (lower is better)
Translates to: LTDLSAFLVGTFLSFGAWMAAAA*GSAETL
Trigger: CAATGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCAT...CCAGGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR CAA 90 bp CAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCGGCTGTGAGGGGCTTTaGAGAGATGTGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: QLTDLSAFLVGTFLSFGAGCEGL*RDVATQ
Trigger: CTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCC...GGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CAA 90 bp GGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACCCAGCAGGTTACTCCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: GSHAGFFTHWPCNTQQVTPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...AGTAACCTGCTGGGTGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp ATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCCCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: MEEMLRHSGVWQPLAASPPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...GGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCAT
59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp AAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTCGGGGACCCCGTCTaGGGCCAGCTGGCCCATCTG +
Preference number: 5 (lower is better)
Translates to: KVPSSKSFTMKWQQLLWALGDPV*GQLAHL
Trigger: CAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAG...AGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGACTCGGGGACCCCGTCTaGGGCCAGCTGGCCCATCTG +
Preference number: 5 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRLGDPV*GQLAHL
Trigger: CAGATGGGCCAGCTGGCCCAAGACGGGGTCCCCGAG...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp AGGGCTCTCACTACCATTTGGTGCCAACTCCTGTCCCCTGGGGTCACCTCAATGCCTCGTAATCCACGTTaGCGGGATCCTGCCTGCAGG +
Preference number: 5 (lower is better)
Translates to: RALTTIWCQLLSPGVTSMPRNPR*RDPACR
Trigger: CCTGCAGGCAGGATCCCGCAAACGTGGATTACGAGG...CATTGAGGTGACCCCAGGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR CAA 90 bp GAGGTGTGGGCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCGGCTCTCACTACCATTaGGTGCCAACTCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: EVWATFSPGIMKVPSSKSGSHYH*VPTPVP
Trigger: GGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCC...GCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGCCCACACCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CAA 90 bp TGTGGGGCCATGGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: CGAMEEMLRHSGVWQPLAGKGWR*LVLLRE
Trigger: CTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCC...TGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCCATGGCCCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTGCCACTGAGCCCGGCTaGCAGTGTGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: PGSRRPPDAMVWGHGRNVATEPG*QCAFRQ
Trigger: TTGTCTAAAAGCACACTGCAAGCCGGGCTCAGTGGC...AACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAACCCGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCTCACCTGGGAGACCCTaGGATGGCCGAGGCCCTCGC +
Preference number: 5 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTSPGRP*DGRGPR
Trigger: GCGAGGGCCTCGGCCATCCAAGGGTCTCCCAGGTGA...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACAGGCAGGGCACACAGTTaGTGCAAAGGACCTGAGGTG +
Preference number: 5 (lower is better)
Translates to: ARLPQVPMQASSLTGHATGRAHS*CKGPEV
Trigger: CACCTCAGGTCCTTTGCACAAACTGTGTGCCCTGCC...TGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CAA 90 bp ATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGAGCCAGGATGGCAGCAGCTGCTTaGGGCTTTGTAGGAGAGTGT +
Preference number: 5 (lower is better)
Translates to: MLRHSGVWQPLAASPRARMAAAA*GFVGEC
Trigger: ACACTCTCCTACAAAGCCCAAAGCAGCTGCTGCCAT...CCTGGCTCTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GGCCACTGCGTTGGAGTAGAGGAAGAGATCCTCGTAATCCACGTTTGCGGGATCGACACAGGACTGGCTTaGGGGAGGCCTGTAGTCCCA +
Preference number: 5 (lower is better)
Translates to: GHCVGVEEEILVIHVCGIDTGLA*GRPVVP
Trigger: TGGGACTACAGGCCTCCCCAAAGCCAGTCCTGTGTC...GATCCCGCAAACGTGGATTACGAGGATCTCTTCCTCTACTCCAACGCAGTGGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000591154.1
CDS-3UTR CAA 90 bp ACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGTGTGGAAAGGGTGGCGGTTGTaGGTACTCCTCCGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: TSLFHFPGSRRPPDAMVWKGWRL*VLLREL
Trigger: CAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTT...CCACACCATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTGGGCTCTGCGGAAAGGGTGGCGGTTGTaGGTACTCCTCCGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: PSSKSFTMKWQQLLWALRKGWRL*VLLREL
Trigger: CAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTT...CCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CAA 90 bp GCCACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGCCTCGTAATCCACGTTaGCGGGATCCTTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: ATFSPGIMKVPSSKSFTMPRNPR*RDPSAC
Trigger: GCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGG...CATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp CAGCTGACCGACCTCTCGGCCTTCCTGGTGGGGACCTTTCTGTCTTTTGGTGCCACGGCTTCCTTTCCTTaGATTGGTGACACAGGACTG +
Preference number: 5 (lower is better)
Translates to: QLTDLSAFLVGTFLSFGATASFP*IGDTGL
Trigger: CAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCGT...GGCACCAAAAGACAGAAAGGTCCCCACCAGGAAGGCCGAGAGGTCGGTCAGCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CAA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGCTCTCGGGGAGCATTTaGAGGCTCCTCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRLSGSI*RLLQSF
Trigger: GAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAG...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHGKGWR*LVLLRE
Trigger: CTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCC...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp TATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGTGCTGACACCCATGGCAAAGGGTGGCGGTaGTTGGTACTCCTCCGGGAG +
Preference number: 5 (lower is better)
Translates to: YGKRARIHLASNPGADTHGKGWR*LVLLRE
Trigger: CTCCCGGAGGAGTACCAACAACCGCCACCCTTTGCC...ATGGGTGTCAGCACCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CACCTGGCTTCAAATCCTGGTGCTGACACCCATAGCTCTGTGGCCTTGGTCACGGCCACTGAGCCCGGCTaGCAGTGTGCTTTTAGACAA +
Preference number: 5 (lower is better)
Translates to: HLASNPGADTHSSVALVTATEPG*QCAFRQ
Trigger: TTGTCTAAAAGCACACTGCAAGCCGGGCTCAGTGGC...CGTGACCAAGGCCACAGAGCTATGGGTGTCAGCACCAGGATTTGAAGCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGCCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCACTGGCCATGCAACACATCCTCTCTTGAGATaGCACCATGGAACCACTCGG +
Preference number: 5 (lower is better)
Translates to: ARLPQVPMQASSLTGHATHPLLR*HHGTTR
Trigger: CCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATG...TGTTGCATGGCCAGTGAGTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CAA 90 bp GGAAGAAATGTTAAGGCATTCAGGAGTGTGGCAGCCCCTGGCAGCGAGTCCCAGCATCCTCTCTTGAGATaGCACCATGGAACCACTCGG +
Preference number: 5 (lower is better)
Translates to: GRNVKAFRSVAAPGSESQHPLLR*HHGTTR
Trigger: CCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATG...CTGGGACTCGCTGCCAGGGGCTGCCACACTCCTGAATGCCTTAACATTTCTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GCAGCGTCACTGCTACAGCCAGACTACCCCAGGTTCCCATGCAGGCTTCTTCACTCTCAGCATCCTCTCTaGAGATTGCACCATGGAACC +
Preference number: 5 (lower is better)
Translates to: AASLLQPDYPRFPCRLLHSQHPL*RLHHGT
Trigger: GGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAGA...GTGAAGAAGCCTGCATGGGAACCTGGGGTAGTCTGGCTGTAGCAGTGACGCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CAA 90 bp GAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAACCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: ECRNRPQKHLYSISRVPEPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...TTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCCCTCGTAATCCACGTTaGCGGGATCCTTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPPRNPR*RDPSAC
Trigger: GCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGG...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
54% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CTGCCTGCAGGGCTGTGTCAGCAGCTCCCTGCGCGGCTCAATTGGCTTCTGCTGATTTTAATCTCGGTGTaGCAAAAGCACTGGAAAGGT +
Preference number: 5 (lower is better)
Translates to: LPAGLCQQLPARLNWLLLILISV*QKHWKG
Trigger: ACCTTTCCAGTGCTTTTGCAACACCGAGATTAAAAT...CAGCAGAAGCCAATTGAGCCGCGCAGGGAGCTGCTGACACAGCCCTGCAGGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000586872.5
CDS-3UTR CAA 90 bp GTTCCCGAAGACCCCCGGATGCCATGGTGTGGGGCCATGGAAGAAATGTTAAGGACGGCTTCCTTTCCTTaGATTGGTGACACAGGACTG +
Preference number: 5 (lower is better)
Translates to: VPEDPRMPWCGAMEEMLRTASFP*IGDTGL
Trigger: CAGTCCTGTGTCACCAATCAAAGGAAAGGAAGCCGT...CCTTAACATTTCTTCCATGGCCCCACACCATGGCATCCGGGGGTCTTCGGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGATGCCATGGCTGTGAGGGGCTTTaGAGAGATGTGGCCACACAG +
Preference number: 5 (lower is better)
Translates to: PKNIFIPFPGFPKTPGCHGCEGL*RDVATQ
Trigger: CTGTGTGGCCACATCTCTCAAAAGCCCCTCACAGCC...ATGGCATCCGGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS CCA 90 bp CCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCTCTGCGGAGACATTGTAGGAGAGTG +
Preference number: 5 (lower is better)
Translates to: PGIMKVPSSKSFTMK*QQLLWALRRHCRRV
Trigger: CACTCTCCTACAATGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS-3UTR CAA 90 bp CAGATCCACAGCCTCAGTTACTGCTGCTTTCTGAGAAGCTATGACATGAAGCACGACATGAAGCACCCCTaGCCCCCTCCAAGGAAACCC +
Preference number: 5 (lower is better)
Translates to: QIHSLSYCCFLRSYDMKHDMKHP*PPPRKP
Trigger: GGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTC...GTGCTTCATGTCATAGCTTCTCAGAAAGCAGCAGTAACTGAGGCTGTGGATCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp GGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCCTCGTAATCCACGTTaGCGGGATCCTTCTGCCTGC +
Preference number: 5 (lower is better)
Translates to: GIMKVPSSKSFTMKWQQLPRNPR*RDPSAC
Trigger: GCAGGCAGAAGGATCCCGCAAACGTGGATTACGAGG...CAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp GTGAGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGGGCTCTCACTACCATTaGGTGCCAACTCCTGTCCCC +
Preference number: 5 (lower is better)
Translates to: VSAGTDPKNIFIPFPGFPGSHYH*VPTPVP
Trigger: GGGGACAGGAGTTGGCACCAAATGGTAGTGAGAGCC...CGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp GGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCCCGGCTGTCTCTTGAGATaGCACCATGGAACCACTCGG +
Preference number: 5 (lower is better)
Translates to: GTDPKNIFIPFPGFPKTPGCLLR*HHGTTR
Trigger: CCGAGTGGTTCCATGGTGCAATCTCAAGAGACAGCC...GGGGGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CAA 90 bp CCTCAGATAAAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTAGCGACATGAAGCACCCCTaGCCCCCTCCAAGGAAACCC +
Preference number: 5 (lower is better)
Translates to: PQIKHATTDKSFTHCLASDMKHP*PPPRKP
Trigger: GGGTTTCCTTGGAGGGGGCAAGGGGTGCTTCATGTC...GCTAGCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000586872.5
ENST00000616070.4
CDS-3UTR CAA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATCCCTGCGCGGCTCAATaGGCTTCTGCTGGTGGAAGG +
Preference number: 5 (lower is better)
Translates to: QTISVTLMIVAKITSSPHPCAAQ*ASAGGR
Trigger: CCTTCCACCAGCAGAAGCCAATTGAGCCGCGCAGGG...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp ACCTTCTCCCCGGGGATCATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAACTCTCGGGGAGCATTTaGAGGCTCCTCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: TFSPGIMKVPSSKSFTMKLSGSI*RLLQSF
Trigger: GAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAG...TTTCATGGTGAAGCTCTTGGATGATGGGACTTTCATGATCCCCGGGGAGAAGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CAA 90 bp AACAAACAGATGATATGGGAAAAGGGCTCGGATTCACCTGGCTTCAAATCCTGGAAAGGGTGGCGGTTGTaGGTACTCCTCCGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: NKQMIWEKGSDSPGFKSWKGWRL*VLLREL
Trigger: CAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTT...CCAGGATTTGAAGCCAGGTGAATCCGAGCCCTTTTCCCATATCATCTGTTTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS TCA 90 bp GATGCATTCGAGTTCATAACCCAGCTCTACTGTCCATCAGCTGTGTaGCCTCAGGCAATCGTCTCTCCCTTTCTGACCTTCAGCTTCCTC +
Preference number: 5 (lower is better)
Translates to: DAFEFITQLYCPSAV*PQAIVSPFLTFSFL
Trigger: GAGGAAGCTGAAGGTCAGAAAGGGAGAGACGATTGCCTGAGGTCACACAGCTGATGGACAGTAGAGCTGGGTTATGAACTCGAATGCATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535834.1
ENST00000616070.4
CDS GCA 90 bp GTGGCTGTGACTCCAGCAAGTTCTCAGCATCCCTGTATGCTCAGATaGATTCGAGTTCATAACCCAGCTCTACTGTCCATCAGCTGTGTG +
Preference number: 5 (lower is better)
Translates to: VAVTPASSQHPCMLR*IRVHNPALLSISCV
Trigger: CACACAGCTGATGGACAGTAGAGCTGGGTTATGAACTCGAATGCATCTGAGCATACAGGGATGCTGAGAACTTGCTGGAGTCACAGCCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000535834.1
ENST00000616070.4
CDS-3UTR CAA 90 bp GCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCCATCCTCTCTTGAGATaGCACCATGGAACCACTCGG +
Preference number: 5 (lower is better)
Translates to: AGTDPKNIFIPFPGFPKTHPLLR*HHGTTR
Trigger: CCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATG...GGTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp TGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGACCTCTCGGGGAGCATTTaGAGGCTCCTCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: CRNRPQKHLYSISRVPEDLSGSI*RLLQSF
Trigger: GAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAG...GTCTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp AGTGCAGGAACAGACCCCAAAAACATCTTTATTCCATTTCCCGGGTTCCCGAAGCTCTCGGGGAGCATTTaGAGGCTCCTCCAGAGTTTC +
Preference number: 5 (lower is better)
Translates to: SAGTDPKNIFIPFPGFPKLSGSI*RLLQSF
Trigger: GAAACTCTGGAGGAGCCTCAAAATGCTCCCCGAGAG...CTTCGGGAACCCGGGAAATGGAATAAAGATGTTTTTGGGGTCTGTTCCTGCACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS-3UTR CAA 90 bp CTTCCTTGGTGGTTATTCTGTTCATCTCTGCTGACGGCTTCCTTTCCTTTGATTAAAGGGTGGCGGTTGTaGGTACTCCTCCGGGAGCTG +
Preference number: 5 (lower is better)
Translates to: LPWWLFCSSLLTASFPLIKGWRL*VLLREL
Trigger: CAGCTCCCGGAGGAGTACCAACAACCGCCACCCTTT...AATCAAAGGAAAGGAAGCCGTCAGCAGAGATGAACAGAATAACCACCAAGGAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000613195.4
ENST00000616070.4
CDS-3UTR CAA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAGATGCTTCTGTCTGGTaGCCTCTGGACTTCACTCTG +
Preference number: 5 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRDASVW*PLDFTL
Trigger: CAGAGTGAAGTCCAGAGGCAACCAGACAGAAGCATC...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CAA 90 bp TGGAGGATGACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGATCTCAGCATCCTCTCTaGAGATTGCACCATGGAACC +
Preference number: 5 (lower is better)
Translates to: WRMTLPEGLALRRKIMNRSQHPL*RLHHGT
Trigger: GGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAGA...TCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGTCATCCTCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS-3UTR CAA 90 bp ACCCTCCCTGAGGGCCTTGCTCTGAGGCGTAAAATAATGAATAGAAGGTCTGGCGATTTTGCTGTGATCTaGGCTGTGAGTACAGCTCTC +
Preference number: 5 (lower is better)
Translates to: TLPEGLALRRKIMNRRSGDFAVI*AVSTAL
Trigger: GAGAGCTGTACTCACAGCCAAGATCACAGCAAAATC...GCCAGACCTTCTATTCATTATTTTACGCCTCAGAGCAAGGCCCTCAGGGAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616645.4
CDS-3UTR CAA 90 bp CTGGCCTCAGATAAAACATGCCACTACGGACAAAAGCTTCACTCATTGCTTGGCTTCCAAGGCTGTCTCTaGAGATTGCACCATGGAACC +
Preference number: 5 (lower is better)
Translates to: LASDKTCHYGQKLHSLLGFQGCL*RLHHGT
Trigger: GGTTCCATGGTGCAATCTCAAGAGACAGCCTTGGAA...GCCAAGCAATGAGTGAAGCTTTTGTCCGTAGTGGCATGTTTTATCTGAGGCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS-3UTR CAA 90 bp CAAACCATCAGCGTCACTCTGATGATTGTTGCTAAAATAACCAGCTCACCCCATAGCTTCACTCATTGCTaGGCTAGCAGCTCCCGTTCT +
Preference number: 5 (lower is better)
Translates to: QTISVTLMIVAKITSSPHSFTHC*ASSSRS
Trigger: AGAACGGGAGCTGCTAGCCAAGCAATGAGTGAAGCT...ATGGGGTGAGCTGGTTATTTTAGCAACAATCATCAGAGTGACGCTGATGGTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS GCA 72 bp GGGACCCCGTCTTGGGCCAGCTGGCCCATCTGGGTGTaGACAAACCAGTCCAGCCGTGGGGGTAGCGGTAGG +
Preference number: 6 (lower is better)
Translates to: GTPSWASWPIWV*TNQSSRGGSGR
Trigger: CCTACCGCTACCCCCACGGCTGGACTGGTTTGTGCACACCCAGATGGGCCAGCTGGCCCAAGACGGGGTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS CCA 72 bp GGGCAGCTTCCCGGCCTCTGTCATAGCTTCCTGGGGTaGAGGGAAGGTCACCTGGGAGACCCTTGGATGGCC +
Preference number: 6 (lower is better)
Translates to: GQLPGLCHSFLG*REGHLGDPWMA
Trigger: GGCCATCCAAGGGTCTCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGAGGCCGGGAAGCTGCCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586872.5
ENST00000593031.1
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS CCA 72 bp GGTAGGGGCAGCTTCCCGGCCTCTGTCATAGCTTCCTaGGGTGGAGGGAAGGTCACCTGGGAGACCCTTGGA +
Preference number: 6 (lower is better)
Translates to: GRGSFPASVIAS*GGGKVTWETLG
Trigger: TCCAAGGGTCTCCCAGGTGACCTTCCCTCCACCCCAGGAAGCTATGACAGAGGCCGGGAAGCTGCCCCTACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000586872.5
ENST00000593031.1
ENST00000613195.4
ENST00000613986.4
ENST00000616070.4
ENST00000616645.4
CDS CCA 72 bp ACTCCACTTCCAAGGCTGTCTCTTGAGATTGCACCATaGAACCACTCGGGGACCCCGTCTTGGGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: TPLPRLSLEIAP*NHSGTPSWASW
Trigger: CCAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGACAGCCTTGGAAGTGGAGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS CAA 72 bp AGAGTAAACTCCACTTCCAAGGCTGCTGGGAGACCCTaGGATGGCCGAGGCCCTCGCTGTAGCTGTGCCAGT +
Preference number: 6 (lower is better)
Translates to: RVNSTSKAAGRP*DGRGPRCSCAS
Trigger: ACTGGCACAGCTACAGCGAGGGCCTCGGCCATCCAAGGGTCTCCCAGCAGCCTTGGAAGTGGAGTTTACTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000535834.1
CDS CCA 72 bp AGCAAGTTCTCAGCATCCTCTCTTGAGATTGCACCATaGAACCACTCGGGGACCCCGTCTTGGGCCAGCTGG +
Preference number: 6 (lower is better)
Translates to: SKFSASSLEIAP*NHSGTPSWASW
Trigger: CCAGCTGGCCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGAGGATGCTGAGAACTTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000586872.5
ENST00000613195.4
ENST00000613986.4
ENST00000616645.4
CDS CAA 72 bp GAGAGTAAACTCCACTTCCAAGGCTGTCTCTTGAGATaGCACCATGGAACCACTCGGGGACCCCGTCTTGGG +
Preference number: 6 (lower is better)
Translates to: ESKLHFQGCLLR*HHGTTRGPRLG
Trigger: CCCAAGACGGGGTCCCCGAGTGGTTCCATGGTGCAATCTCAAGAGACAGCCTTGGAAGTGGAGTTTACTCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616070.4
CDS CCA 72 bp TCCAAGAGCTTCACCATGAAATGGCAGCAGCTGCTTTaGGCTCTGCGGAGACATTGTAGGAGAGTGTGTAGC +
Preference number: 6 (lower is better)
Translates to: SKSFTMKWQQLL*ALRRHCRRVCS
Trigger: GCTACACACTCTCCTACAATGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613195.4
CDS CCA 72 bp ATGAAAGTCCCATCATCCAAGAGCTTCACCATGAAATaGCAGCAGCTGCTTTGGGCTCTGCGGAGACATTGT +
Preference number: 6 (lower is better)
Translates to: MKVPSSKSFTMK*QQLLWALRRHC
Trigger: ACAATGTCTCCGCAGAGCCCAAAGCAGCTGCTGCCATTTCATGGTGAAGCTCTTGGATGATGGGACTTTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000613195.4