Pregenerated sensors for HSFY1 (Homo sapiens)
Ensembl gene IDs: ENSG00000172468Ensembl transcript IDs: ENST00000338876.8
Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR-3UTR TCA 90 bp | TATCTTCTTGCTCCATCCTTCAGTCTTATGTTTGCTTTATATATATCACGCACGGATGAAGAACGTCCGTaGTGTTCCAAATCCACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLLAPSFSLMFALYISRTDEERP*CSKSTV Trigger: CACTGTGGATTTGGAACATCACGGACGTTCTTCATC...CGTGCGTGATATATATAAAGCAAACATAAGACTGAAGGATGGAGCAAGAAGATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338876.8 |
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| 3UTR-3UTR GCA 90 bp | GCTCCCTATAGACATGCTTCAATCAGTTTATCTTCTTGCTCCATCCTTCAGTCTCGCACGGATATTAATTaGATTTATGTGAGGGAGAAA | + |
|
Preference number: 2 (lower is better) Translates to: APYRHASISLSSCSILQSRTDIN*IYVREK Trigger: TTTCTCCCTCACATAAATGCAATTAATATCCGTGCG...AGACTGAAGGATGGAGCAAGAAGATAAACTGATTGAAGCATGTCTATAGGGAGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338876.8 |
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| CDS-3UTR GCA 90 bp | ATCTTCTTGCTCCATCCTTCAGTCTTATGTTTGCTTTATATATATCACGCACGGCGCACGGATATTAATTaGATTTATGTGAGGGAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: IFLLHPSVLCLLYIYHARRTDIN*IYVREK Trigger: TTTCTCCCTCACATAAATGCAATTAATATCCGTGCG...CCGTGCGTGATATATATAAAGCAAACATAAGACTGAAGGATGGAGCAAGAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000338876.8 |
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