RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSF4 (Homo sapiens)

Ensembl gene IDs: ENSG00000102878

Ensembl transcript IDs: ENST00000434833.6, ENST00000517680.5, ENST00000517685.5, ENST00000517729.5, ENST00000517750.5, ENST00000517867.2, ENST00000519105.5, ENST00000519224.5, ENST00000520304.5, ENST00000520528.1, ENST00000520833.5, ENST00000521314.5, ENST00000521374.6, ENST00000521624.5, ENST00000521916.1, ENST00000522023.1, ENST00000522027.5, ENST00000522295.5, ENST00000522870.5, ENST00000523077.2, ENST00000523562.5, ENST00000584272.5, ENST00000682526.1, ENST00000683295.1, ENST00000684701.1

Found 657 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGCACGCGCTCCAGTAGCTGCTCGCGGCCGCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCGCGCTCCGGCCTAAGCAGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: RTRSSSCSRPRTKLG*WNSTWSRSGLSRPP
Trigger: GGGCGGCCTGCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGTGCG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR GCA 90 bp TCCCGCAGCCGCGCCTCGGTGCTCTCCTGCACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGACCCAGGTCCTCCGGGCGCCAGCGG +
Preference number: 1 (lower is better)
Translates to: SRSRASVLSCTPRKA*TSPSSRPRSSGRQR
Trigger: CCGCTGGCGCCCGGAGGACCTGGGTCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGCGGGA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CCA 90 bp GCCCAGGGCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTCCTTCCCAAGGACAGCTCCATGTCC +
Preference number: 1 (lower is better)
Translates to: AQGWASQGRLDIQQE*GPERGVLPKDSSMS
Trigger: GGACATGGAGCTGTCCTTGGGAAGGACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGCCCTGGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520528.1
ENST00000521624.5
3UTR TCA 90 bp ATCAGGGACAGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACACTGGATCAGCTTGCCAATGACCCGG +
Preference number: 1 (lower is better)
Translates to: IRDSFLLPPALLGPA*SGPKRHWISLPMTR
Trigger: CCGGGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR GCA 90 bp TCCCCTCATCCAGCATCAGGGACAGCTTTCTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTGGCCCAAAGAGACACTGGATCAGCT +
Preference number: 1 (lower is better)
Translates to: SPHPASGTAFSCLLH*SAPPEVAQRDTGSA
Trigger: AGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGATGCTGGATGAGGGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR GCA 90 bp TCGCCCAATGGTGAGGGCATGGGTGGCTCAAGGAACGCTCTGCAGTaGAGCCTGAACTCAGGATTTCCCTGCAAATTGCAGATTGCCCCC +
Preference number: 1 (lower is better)
Translates to: SPNGEGMGGSRNALQ*SLNSGFPCKLQIAP
Trigger: GGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTCCTTGAGCCACCCATGCCCTCACCATTGGGCGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR GCA 90 bp GGCTCAAGGAACGCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTaGAAATTGCAGATTGCCCCCTCACTCAATCAAGGTAGCTCAGCC +
Preference number: 1 (lower is better)
Translates to: GSRNALQCSLNSGFP*KLQIAPSLNQGSSA
Trigger: GGCTGAGCTACCTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTCCTTGAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR GCA 90 bp GGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 2 (lower is better)
Translates to: GPPKAAWTSSRSGAPSVGASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...CCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR CCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: WASQGRLDIQQEWGPERGVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 2 (lower is better)
Translates to: WASQGRLDIQQEWGPERGCAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR GCA 90 bp GTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 2 (lower is better)
Translates to: VSPWDPLVQAVGHSWAPRAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...CCGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 2 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR GCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: PVRYLPGIPWFRLLGIPGRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp TTCCCTGGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: FPGLGEFNPLTASSGSPRRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...GCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCCAGGGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAGTGGGGCCCCGAGCGTaGGGTCCTTCCCAAGGACAG +
Preference number: 2 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIVGPRA*GPSQGQ
Trigger: CTGTCCTTGGGAAGGACCCCACGCTCGGGGCCCCAC...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520528.1
ENST00000521624.5
3UTR-3UTR TCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 2 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp GGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: GISLGSPGSGCWAFLGPSLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR GCA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCG +
Preference number: 2 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIRTKLG*WNSTWS
Trigger: CGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCG...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR GCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGAGGAACGCTCTGCAGTaGAGCCTGAACTCAGGATTT +
Preference number: 2 (lower is better)
Translates to: WASQGRLDIQQEWGPERGRNALQ*SLNSGF
Trigger: AAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTCCT...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CCA 90 bp CTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LDRQLRLTPLWNQGLHQGPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...TCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp GCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: ALEPRAASRTAPCPSPSGRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CAGGCCCAGAGGCCCCCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGGGCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: QAQRPPVRYLPGIPWFRLGSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCC...CAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGGGGGCCTCTGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000520528.1
ENST00000522295.5
3UTR-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp TTCCTGGGCCCCTCGGGGCTGAAGCTCCCTTTCCCTTCCAGGATGGCCTGCACCGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: FLGPSGLKLPFPSRMACTVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...GGTGCAGGCCATCCTGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp GCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: APAITGGRKPGPLRGWRVLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...GACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000520528.1
ENST00000522295.5
3UTR-3UTR TCA 90 bp CAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: QVSPWDPLVQAVGHSWAPLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...AGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR GCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 2 (lower is better)
Translates to: WASQGRLDIQQEWGPERGSGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR GCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGACGCGCTCCAGTAGCTaGTCGCGGCCGCGCACGAAG +
Preference number: 2 (lower is better)
Translates to: EGESLVPSGDGESSGMSETRSSS*SRPRTK
Trigger: CTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGT...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR GCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGATTTCCCTGCAAATTaGAGATTGCCCCCTCACTCA +
Preference number: 2 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVDFPAN*RLPPHS
Trigger: TGAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATC...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 2 (lower is better)
Translates to: EGCAAADWFQAPSEARGLLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 2 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR TCA 90 bp CTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 2 (lower is better)
Translates to: LSGISLGSPGSGCWAFLGMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...GCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR GCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATACCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 2 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 2 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGGTGGGGCCCCGAGCGTaGGGTCCTTCCCTGGGCTTG +
Preference number: 2 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKVGPRA*GPSLGL
Trigger: CAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCAC...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 2 (lower is better)
Translates to: PPAQAHPALEPRAASRTAGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 2 (lower is better)
Translates to: GISLGSPGSGCWAFLGPSLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 2 (lower is better)
Translates to: GSPRSGTKGCIKDSSMSKPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...CTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 2 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCRPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR TCA 90 bp GGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 2 (lower is better)
Translates to: GISLGSPGSGCWAFLGPSENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTCTCTGCAGTGCAGCCTaGACTCAGGATTTCCCTGCA +
Preference number: 2 (lower is better)
Translates to: EGCAAADWFQAPSEARGLLCSAA*TQDFPA
Trigger: TGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAG...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CCA 90 bp GATGATGGGGCCCCTGGCCCTGTGAGGGCTAAGGCCCAAATTTGTCTCTGGGAGAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 2 (lower is better)
Translates to: DDGAPGPVRAKAQICLWERQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...CTCCCAGAGACAAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCCCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp CCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 2 (lower is better)
Translates to: PVRYLPGIPWFRLLGIPGLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR TCA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTATGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTACCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 2 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp GCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 2 (lower is better)
Translates to: AITGGRKPGPLRGWRVFWGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...CCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000519224.5
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 2 (lower is better)
Translates to: EGESLVPSGDGESSGMSEWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519224.5
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGGGCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 2 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWGSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCC...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000520528.1
ENST00000522295.5
3UTR-3UTR TCA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGATGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 2 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCACTCTCGCCCAATGGTaGGGGCATGGGTGGCTCAAG +
Preference number: 2 (lower is better)
Translates to: RAASRTAPCPSPSGSILATLAQW*GHGWLK
Trigger: CTTGAGCCACCCATGCCCTCACCATTGGGCGAGAGT...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CCA 90 bp CAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: QSGSQECYKWLKPQAGPGRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp TGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 2 (lower is better)
Translates to: CHHWREKAWSPQGMESLLGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...CAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519224.5
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp TGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGGTCTCTGGGAGAGGCTaGGCCAGGTCTAAGGGAGAA +
Preference number: 2 (lower is better)
Translates to: WREKAWSPQGMESLLGCQVSGRG*ARSKGE
Trigger: TTCTCCCTTAGACCTGGCCCAGCCTCTCCCAGAGAC...CTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519224.5
3UTR-3UTR TCA 90 bp GGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: GCIKDSSMSKSIRVHSRPVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...AGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 2 (lower is better)
Translates to: RAASRTAPCPSPSGSILAVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR TCA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 2 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000519224.5
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR GCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 2 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp CTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 2 (lower is better)
Translates to: LHQGQLHVQVHQGPFSPLRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...CAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp GCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: AASRTAPCPSPSGSILALVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...AAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATACAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 2 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 2 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGATGCTGGAACTCGACGTaGTCGCGCTCCGGCCTAAGC +
Preference number: 2 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRCWNST*SRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCA...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR GCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATATCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 2 (lower is better)
Translates to: GTGFRAQVGGSPALRSAISGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR GCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 2 (lower is better)
Translates to: RAASRTAPCPSPSGSILAKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 2 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 2 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CCA 90 bp CTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 2 (lower is better)
Translates to: LSGISLGSPGSGCWAFLGAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...GCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GATGATGGGGCCCCTGGCCCTGTGAGGGCTAAGGCCCAAATTTGTCTCTGGGAGGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 2 (lower is better)
Translates to: DDGAPGPVRAKAQICLWEAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...CTCCCAGAGACAAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 2 (lower is better)
Translates to: EGESLVPSGDGESSGMSEGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000519224.5
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 2 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 2 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR GCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 2 (lower is better)
Translates to: RAASRTAPCPSPSGSILASGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR GCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGAACTCAGGATTTCCCTaGAAATTGCAGATTGCCCCC +
Preference number: 2 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRNSGFP*KLQIAP
Trigger: GGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTT...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CCA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGAGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 2 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CAA 90 bp AGGAACGCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTGCAAATaGCAGATTGCCCCCTCACTCAATCAAGGTAGCTCAGCCCAATCA +
Preference number: 2 (lower is better)
Translates to: RNALQCSLNSGFPCK*QIAPSLNQGSSAQS
Trigger: TGATTGGGCTGAGCTACCTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTCCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR GCA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTACTGCAAATTGCAGATTaGCCCCTCACTCAATCAAGG +
Preference number: 2 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLLQIAD*PLTQSR
Trigger: CCTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAG...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR GCA 90 bp GCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: AASRTAPCPSPSGSILALKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...AAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR GCA 90 bp CTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 2 (lower is better)
Translates to: LHQGQLHVQVHQGPFSPLKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...CAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CAA 90 bp GGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: GPPKAAWTSSRSGAPSVGGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCC
72% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR CCA 72 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTCCTTCCCTGGGCTTGG +
Preference number: 3 (lower is better)
Translates to: WASQGRLDIQQE*GPERGVLPWAW
Trigger: CCAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CAA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: WASQGRLDIQQEWGPERGGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
71% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR GCA 72 bp CGCGCCTCGGTGCTCTCCTGCACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGACCCAGGTCCTCCGGG +
Preference number: 3 (lower is better)
Translates to: RASVLSCTPRKA*TSPSSRPRSSG
Trigger: CCCGGAGGACCTGGGTCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGCGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CCA 72 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTCCTTCCCAAGGACAGC +
Preference number: 3 (lower is better)
Translates to: WASQGRLDIQQE*GPERGVLPKDS
Trigger: GCTGTCCTTGGGAAGGACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000520528.1
ENST00000521624.5
3UTR GCA 72 bp TCCAGTAGCTGCTCGCGGCCGCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCGCGCTCCGGCCTAAGC +
Preference number: 3 (lower is better)
Translates to: SSSCSRPRTKLG*WNSTWSRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCGCGGCCGCGAGCAGCTACTGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CCA 72 bp AGTAGCTGCTCGCGGCCGCGCACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGCTCCGGCCTAAGCAGG +
Preference number: 3 (lower is better)
Translates to: SSCSRPRTKLGC*NSTWSRSGLSR
Trigger: CCTGCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCGCGGCCGCGAGCAGCTACT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CCA 72 bp CCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTaGGGTCCTTCCCTAGGAGAAGTGGGACTGCGCTCA +
Preference number: 3 (lower is better)
Translates to: PPGHPAGVGPRA*GPSLGEVGLRS
Trigger: TGAGCGCAGTCCCACTTCTCCTAGGGAAGGACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CAA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR TCA 72 bp GTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCAGGATGGCCTGCACCA +
Preference number: 3 (lower is better)
Translates to: VQAVGHSWAPRG*SSLSLPGWPAP
Trigger: TGGTGCAGGCCATCCTGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAATGCCCAACAGCCTGAAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CAA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: EGESLVPSGDGESSGMSEGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR TCA 72 bp AGACACTGGATCAGCTTGCCAATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGTGTCACCACCTCCCGC +
Preference number: 3 (lower is better)
Translates to: RHWISLPMTRCC*PWLCRSVTTSR
Trigger: GCGGGAGGTGGTGACACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR GCA 72 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGG +
Preference number: 3 (lower is better)
Translates to: PGPSRRQSGSQE*YKWLKPQAGPG
Trigger: CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR CCA 72 bp TTTCCAGGCCCAGAGGCCCCCTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGG +
Preference number: 3 (lower is better)
Translates to: FPGPEAPCQVSP*DPLVQAVGHSW
Trigger: CCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGGGGGCCTCTGGGCCTGGAAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CAA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: EGCAAADWFQAPSEARGLGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CAA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: EGCAAADWFQAPSEARGLRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CAA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CAA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 3 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CAA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTGGATTTCCCTGCAAATaGCAGATTGCCCCCTCACTC +
Preference number: 3 (lower is better)
Translates to: EGCAAADWFQAPSEARGLGFPCK*QIAPSL
Trigger: GAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATCC...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR GCA 72 bp CCAGCATCAGGGACAGCTTTCTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTGGCCCAAAGAGACACT +
Preference number: 3 (lower is better)
Translates to: PASGTAFSCLLH*SAPPEVAQRDT
Trigger: AGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGATGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CCA 72 bp TCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACATCTAGAGGCCCTGCA +
Preference number: 3 (lower is better)
Translates to: SMSKSIRVHSRP*RLGPSTSRGPA
Trigger: TGCAGGGCCTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR CCA 72 bp CCTTCTCCCTCCTGCCATCACTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGT +
Preference number: 3 (lower is better)
Translates to: PSPSCHHWREKA*SPQGMESLLGC
Trigger: ACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGGGAGAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR CAA 90 bp CAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: QSGSQECYKWLKPQAGPGGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR TCA 72 bp AGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACACTGGATCAGCTTGCCA +
Preference number: 3 (lower is better)
Translates to: SFLLPPALLGPA*SGPKRHWISLP
Trigger: TGGCAAGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR CCA 72 bp TCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGATCAGCTTGCCAATGAC +
Preference number: 3 (lower is better)
Translates to: SLASCIARPRLK*PKETLDQLAND
Trigger: GTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000521314.5
3UTR-3UTR CAA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 3 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR GCA 72 bp GGTGAGGGCATGGGTGGCTCAAGGAACGCTCTGCAGTaGAGCCTGAACTCAGGATTTCCCTGCAAATTGCAG +
Preference number: 3 (lower is better)
Translates to: GEGMGGSRNALQ*SLNSGFPCKLQ
Trigger: CTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTCCTTGAGCCACCCATGCCCTCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR-3UTR CAA 90 bp GAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: ESLVPSGDGESSGMSEMMRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...CATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000520528.1
ENST00000521314.5
ENST00000522295.5
3UTR-3UTR CAA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGAAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
3UTR-3UTR CAA 90 bp GAACGCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTGCAAATTGCAGATTGCAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 3 (lower is better)
Translates to: ERSAVQPELRISLQIADCRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...GCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
3UTR GCA 72 bp AACGCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTaGAAATTGCAGATTGCCCCCTCACTCAATCAAGGT +
Preference number: 3 (lower is better)
Translates to: NALQCSLNSGFP*KLQIAPSLNQG
Trigger: ACCTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp ACCTCGCCCAGTAGTCGACCCAGGTCCTCCGGGCGCCAGCGGCCGTCGTCGCCGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: TSPSSRPRSSGRQRPSSPRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CGGCGACGACGGCCGCTGGCGCCCGGAGGACCTGGGTCGACTACTGGGCGAGGT
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR GCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: WASQGRLDIQQEWGPERGAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGCGCTTCCTGCATGGTaGAGTCTCGGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWALPAW*SLGPAL
Trigger: CAGAGCCGGGCCGAGACTGCACCATGCAGGAAGCGC...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGCGTGGGCAGCGCAGCTaGCGCTTCCTGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVRGQRS*RFLHGA
Trigger: TGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACG...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: WASQGRLDIQQEWGPERGMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp ACCTCGCCCAGTAGTCGACCCAGGTCCTCCGGGCGCCAGCGGCCGTCGTCGCCGGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: TSPSSRPRSSGRQRPSSPVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...CGGCGACGACGGCCGCTGGCGCCCGGAGGACCTGGGTCGACTACTGGGCGAGGT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR GCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGCTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: GCAAADWFQAPSEARGLRAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...CCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGCAGCCGCGCCTCGGTaGTCTCCTGCACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGAAAPR*SPALPA
Trigger: TGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGC...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: WASQGRLDIQQEWGPERGWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RRMCSGGLVPSPFRGAGSRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...AGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: PPAQAHPALEPRAASRTARQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGTCTCGTTCTGCTGCCTaGGCTCCCGCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGSRSAA*APAAAP
Trigger: AGGCGCGGCTGCGGGAGCTCAGGCAGCAGAACGAGA...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: CAAADWFQAPSEARGLRGPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGCTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGTGGGGCCCCGAGCGTaGGGTCCTTCCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVVGPRA*GPSLGL
Trigger: CAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCAC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: GCAAADWFQAPSEARGLRDIQQE*GPERGV
Trigger: GACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTC...CCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGDIQQE*GPERGV
Trigger: GACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: CAAADWFQAPSEARGLRGPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCTCTCGTTCTGCTGCCTaGGCTCCCGCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: ASSGSPRSGTKGCIKDSSSRSAA*APAAAP
Trigger: AGGCGCGGCTGCGGGAGCTCAGGCAGCAGAACGAGA...GGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGTCTCGTTCTGCTGCCTaGGCTCCCGCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARSRSAA*APAAAP
Trigger: AGGCGCGGCTGCGGGAGCTCAGGCAGCAGAACGAGA...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTACGCGCTCCAGTAGCTaGTCGCGGCCGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGTRSSS*SRPRTK
Trigger: CTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTACGCGCTCCAGTAGCTaGTCGCGGCCGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLTRSSS*SRPRTK
Trigger: CTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGT...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GAGACACTGGATCAGCTTGCCAATGACCCGGTGCTGCTGACCGTGGCTCTGCCGGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: ETLDQLANDPVLLTVALPAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...CGGCAGAGCCACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCTC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR GCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGGCAGCCGCGCCTCGGTaGTCTCCTGCACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAAAAPR*SPALPA
Trigger: TGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGC...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGCTGGCGCTTCCTGCATaGTGCAGTCTCGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGLALPA*CSLGPA
Trigger: AGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAG...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGCGTGGGCAGCGCAGCTaGCGCTTCCTGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGRGQRS*RFLHGA
Trigger: TGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACG...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVDIQQE*GPERGV
Trigger: GACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARDIQQE*GPERGV
Trigger: GACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCTCTCGTTCTGCTGCCTaGGCTCCCGCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCSRSAA*APAAAP
Trigger: AGGCGCGGCTGCGGGAGCTCAGGCAGCAGAACGAGA...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR TCA 90 bp TTCCTGGGCCCCTCGGGGCTGAAGCTCCCTTTCCCTTCCAGGATGGCCTGCACCATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: FLGPSGLKLPFPSRMACTMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...GGTGCAGGCCATCCTGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp TTCCTGGGCCCCTCGGGGCTGAAGCTCCCTTTCCCTTCCAGGATGGCCTGCACCCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: FLGPSGLKLPFPSRMACTLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...GGTGCAGGCCATCCTGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTACGCGCTCCAGTAGCTaGTCGCGGCCGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: QVSPWDPLVQAVGHSWAPTRSSS*SRPRTK
Trigger: CTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGT...AGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGACGCGCTCCAGTAGCTaGTCGCGGCCGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGATRSSS*SRPRTK
Trigger: CTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGT...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGCAGCCGCGCCTCGGTaGTCTCCTGCACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGAAAPR*SPALPA
Trigger: TGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAAGCCTGCACCTCGCCCAGTAGTCGACCCAGGTCCTCCGGGCGCCAGCGGCCGAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KACTSPSSRPRSSGRQRPKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...CGGCCGCTGGCGCCCGGAGGACCTGGGTCGACTACTGGGCGAGGTGCAGGCTTT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCTGGCGCTTCCTGCATaGTGCAGTCTCGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARLALPA*CSLGPA
Trigger: AGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTGGCGCTTCCTGCATaGTGCAGTCTCGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLALPA*CSLGPA
Trigger: AGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCGTGGGCAGCGCAGCTaGCGCTTCCTGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARRGQRS*RFLHGA
Trigger: TGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCGCTTACGAGGAAACTaGTCCCGCTCGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGRLRGN*SRSGSS
Trigger: GCTGGAGCCCGAGCGGGACCAGTTTCCTCGTAAGCG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGGGGCAGCACTTCCTTaGCGAAACGGCTCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGGAALP*RNGSGR
Trigger: GCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
66% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGTGCTGGAACTCGACGTaGTCGCGCTCCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGCWNST*SRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCA...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: GPPKAAWTSSRSGAPSVGAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...CCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: CAAADWFQAPSEARGLRGRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGTGGGGCCCCGAGCGTaGGGTCCTTCCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGVGPRA*GPSLGL
Trigger: CAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCAC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
66% GC, longest homopolymer 6 nt, total homopolymer stretches 24 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: RRMCSGGLVPSPFRGAGSPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...AGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGAGGCAGGCCCAGGGCTaGGCCTCCCAAGGCCGCCTG +
Preference number: 4 (lower is better)
Translates to: EGESLVPSGDGESSGMSERQAQG*ASQGRL
Trigger: CAGGCGGCCTTGGGAGGCCCAGCCCTGGGCCTGCCT...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGAAGTCACACTCGTTTaGGGCCAGGGCCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGEVTLV*GQGQPG
Trigger: GCCGGGCTGGCCCTGGCCCCAAACGAGTGTGACTTC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGTGGGGCCCCGAGCGTaGGGTCCTTCCCTAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGVGPRA*GPSLGE
Trigger: TTCTCCTAGGGAAGGACCCCACGCTCGGGGCCCCAC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR TCA 90 bp GGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGCCATGTTGCTATGCTTaGAATACTGGGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GPPKAAWTSSRSGAPSVGPCCYA*NTGAAL
Trigger: AAGTGCTGCCCCAGTATTTCAAGCATAGCAACATGG...CCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGTCTCGTTCTGCTGCCTaGGCTCCCGCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGSRSAA*APAAAP
Trigger: AGGCGCGGCTGCGGGAGCTCAGGCAGCAGAACGAGA...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGGATCAGCTTGCCAATaGCCCGGTGCTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGGSACQ*PGAADR
Trigger: ACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCGCTTCCTGCATGGTaGAGTCTCGGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAALPAW*SLGPAL
Trigger: CAGAGCCGGGCCGAGACTGCACCATGCAGGAAGCGC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRTKLG*WNSTWS
Trigger: CGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGSCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp TTCCTGGGCCCCTCGGGGCTGAAGCTCCCTTTCCCTTCCAGGATGGCCTGCACCCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: FLGPSGLKLPFPSRMACTPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...GGTGCAGGCCATCCTGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCCGTGGGCAGCGCAGCTaGCGCTTCCTGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCRGQRS*RFLHGA
Trigger: TGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACG...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RDWLPGPSRRQSGSQECYLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...ATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTCGCTTACGAGGAAACTaGTCCCGCTCGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLRLRGN*SRSGSS
Trigger: GCTGGAGCCCGAGCGGGACCAGTTTCCTCGTAAGCG...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCCGCTTACGAGGAAACTaGTCCCGCTCGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIRLRGN*SRSGSS
Trigger: GCTGGAGCCCGAGCGGGACCAGTTTCCTCGTAAGCG...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTGGGGCAGCACTTCCTTaGCGAAACGGCTCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLGAALP*RNGSGR
Trigger: GCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCC...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGGGGCAGCACTTCCTTaGCGAAACGGCTCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVGAALP*RNGSGR
Trigger: GCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGCTATGCTTGAAATACTaGGGCAGCACTTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWLCLKY*GSTSLA
Trigger: CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTTGCTGGAACTCGACGTaGTCGCGCTCCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGCWNST*SRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCA...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVTKLGC*NSTWSR
Trigger: GCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARTKLGC*NSTWSR
Trigger: GCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: WASQGRLDIQQEWGPERGAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TTCCTGGGCCCCTCGGGGCTGAAGCTCCCTTTCCCTTCCAGGATGGCCTGCACCTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: FLGPSGLKLPFPSRMACTWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...GGTGCAGGCCATCCTGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCAGGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: GCAAADWFQAPSEARGLRLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGGTGGGGCCCCGAGCGTaGGGTCCTTCCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLVGPRA*GPSLGL
Trigger: CAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCAC...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAGGCCCAGAGGCCCCCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGCCCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QAQRPPVRYLPGIPWFRLPSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGGG...CAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGGGGGCCTCTGGGCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGGAAGTCACACTCGTTTaGGGCCAGGGCCAGCCCGGC +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAEVTLV*GQGQPG
Trigger: GCCGGGCTGGCCCTGGCCCCAAACGAGTGTGACTTC...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS-3UTR TCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGTCTCGTTCTGCTGCCTaGGCTCCCGCAGCCGCGCCT +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLSRSAA*APAAAP
Trigger: AGGCGCGGCTGCGGGAGCTCAGGCAGCAGAACGAGA...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTGGATCAGCTTGCCAATaGCCCGGTGCTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLGSACQ*PGAADR
Trigger: ACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCC...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGATCAGCTTGCCAATaGCCCGGTGCTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARGSACQ*PGAADR
Trigger: ACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GGGCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: GLLPSLEGESLVPSGDGEGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...CTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519224.5
ENST00000522295.5
CDS-3UTR TCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp AGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: RYLPGIPWFRLLGIPGPLGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...GAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGALGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTACTCTCGCCCAATGGTaGGGGCATGGGTGGCTCAAG +
Preference number: 4 (lower is better)
Translates to: PPAQAHPALEPRAASRTATLAQW*GHGWLK
Trigger: CTTGAGCCACCCATGCCCTCACCATTGGGCGAGAGT...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGCGCTTCCTGCATGGTaGAGTCTCGGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGALPAW*SLGPAL
Trigger: CAGAGCCGGGCCGAGACTGCACCATGCAGGAAGCGC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
CDS-3UTR GCA 90 bp GGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAGCAGCTGGCGCTTCCTaGATGGTGCAGTCTCGGCCC +
Preference number: 4 (lower is better)
Translates to: GLGEFNPLTASSGSPRSGAAGAS*MVQSRP
Trigger: GGGCCGAGACTGCACCATGCAGGAAGCGCCAGCTGC...TCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: GLGEFNPLTASSGSPRSGGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...TCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTCTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: RRMCSGGLVPSPFRGAGSLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...AGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCG +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEARTKLG*WNSTWS
Trigger: CGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCG...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGTPRKA*TSPSSR
Trigger: TCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARTPRKA*TSPSSR
Trigger: TCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCGCAGCCGCGCCTCGGTaGTCTCCTGCACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGAAAPR*SPALPA
Trigger: TGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGC...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGGCAGCCGCGCCTCGGTaGTCTCCTGCACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: ALEPRAASRTAPCPSPSGAAAPR*SPALPA
Trigger: TGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGC...CCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARSCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
63% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: GISLGSPGSGCWAFLGPSPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGGGCCCCTGGCCCTGTGAGGCGTGGGCAGCGCAGCTaGCGCTTCCTGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: GWRVFWDVRDDGAPGPVRRGQRS*RFLHGA
Trigger: TGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACG...CCTCACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAGAAGACTCTCCATCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAGGGGCAGCACTTCCTTaGCGAAACGGCTCTGGTCGC +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIGAALP*RNGSGR
Trigger: GCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCC...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEATKLGC*NSTWSR
Trigger: GCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGT...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp ACCTCCCCACTCTCGCCCAATGGTGAGGGCATGGGTGGCTCAAGGAACGCTCTGACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: TSPLSPNGEGMGGSRNALTKLGC*NSTWSR
Trigger: GCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGT...CAGAGCGTTCCTTGAGCCACCCATGCCCTCACCATTGGGCGAGAGTGGGGAGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: PPAQAHPALEPRAASRTARPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTGGCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: RRMCSGGLVPSPFRGAGSGSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCC...AGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGGCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGGSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARGSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: LDRQLRLTPLWNQGLHQGPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...TCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATACCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGTGGGGCCCCGAGCGTaGGGTCCTTCCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPVGPRA*GPSLGL
Trigger: CAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCAC...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCGTGGGGCCCCGAGCGTaGGGTCCTTCCCTGGGCTTG +
Preference number: 4 (lower is better)
Translates to: RAASRTAPCPSPSGSILAVGPRA*GPSLGL
Trigger: CAAGCCCAGGGAAGGACCCCACGCTCGGGGCCCCAC...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: EGESLVPSGDGESSGMSEDIQQE*GPERGV
Trigger: GACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTC...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp CAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATCCTCCCAAGGCCGCCTaGACATCCAGCAGGAGTGGG +
Preference number: 4 (lower is better)
Translates to: QLRLTPLWNQGLHQGQLHPPKAA*TSSRSG
Trigger: CCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGG...ATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: PPAQAHPALEPRAASRTACAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARCAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CCCAATGGTGAGGGCATGGGTGGCTCAAGGAACGCTCTGCAGTGCAGCCTGAACATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: PNGEGMGGSRNALQCSLNMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...GTTCAGGCTGCACTGCAGAGCGTTCCTTGAGCCACCCATGCCCTCACCATTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR TCA 90 bp GGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGGGCCCCTGGCCCTGTGAGGTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: GWRVFWDVRDDGAPGPVRLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...CCTCACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAGAAGACTCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCCTGGGATGTCAGAGATaGTGGGGCCCCTGGCCCTGT +
Preference number: 4 (lower is better)
Translates to: PAITGGRKPGPLRGWRVFLGCQR*WGPWPC
Trigger: ACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAG...GAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp TGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: WREKAWSPQGMESLLGCQWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...CTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp GGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: GCAAADWFQAPSEARGLRENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...CCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGCTCTGCAGTGCAGCCTaGACTCAGGATTTCCCTGCA +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGLCSAA*TQDFPA
Trigger: TGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAG...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR GCA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GAGACACTGGATCAGCTTGCCAATGACCCGGTGCTGCTGACCGTGGCTCTGCCGCTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: ETLDQLANDPVLLTVALPLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...CGGCAGAGCCACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR GCA 90 bp GCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCCTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: APAITGGRKPGPLRGWRVLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...GACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522295.5
CDS-3UTR GCA 90 bp GGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGGGCCCCTGGCCCTGTGAGGCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCG +
Preference number: 4 (lower is better)
Translates to: GWRVFWDVRDDGAPGPVRRTKLG*WNSTWS
Trigger: CGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCG...CCTCACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAGAAGACTCTCCATCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAACGCGCTCCAGTAGCTaGTCGCGGCCGCGCACGAAG +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPTRSSS*SRPRTK
Trigger: CTTCGTGCGCGGCCGCGAGCAGCTACTGGAGCGCGT...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGCAGCGCGGGCACCTTaGGCCGCACGCGCTCCAGTA +
Preference number: 4 (lower is better)
Translates to: AASRTAPCPSPSGSILALAARAP*AARAPV
Trigger: TACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGC...AAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCTPRKA*TSPSSR
Trigger: TCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGT...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEATPRKA*TSPSSR
Trigger: TCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGT...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGGCAGCCGCGCCTCGGTaGTCTCCTGCACTCCCCGCA +
Preference number: 4 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLEAAAPR*SPALPA
Trigger: TGCGGGGAGTGCAGGAGAGCACCGAGGCGCGGCTGC...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: APAITGGRKPGPLRGWRVSCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...GACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000519224.5
ENST00000522295.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGASCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: RDWLPGPSRRQSGSQECYSCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...ATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGALSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGGCCCTTCTCCCTCCTaGCATCACTGGAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSPWDPLVQAVGHSWAPRGPSPS*HHWREK
Trigger: TTTCTCCCTCCAGTGATGGCAGGAGGGAGAAGGGCC...CCGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CCA 90 bp CAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QSGSQECYKWLKPQAGPGLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCGCTTACGAGGAAACTaGTCCCGCTCGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRLRGN*SRSGSS
Trigger: GCTGGAGCCCGAGCGGGACCAGTTTCCTCGTAAGCG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: CAAADWFQAPSEARGLRGLAKRL*SLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAA...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CCCAATGGTGAGGGCATGGGTGGCTCAAGGAACGCTCTGCAGTGCAGCCTGAACTGCTGGAACTCGACGTaGTCGCGCTCCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: PNGEGMGGSRNALQCSLNCWNST*SRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCA...GTTCAGGCTGCACTGCAGAGCGTTCCTTGAGCCACCCATGCCCTCACCATTGGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp GGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: GLGEFNPLTASSGSPRSGTKLGC*NSTWSR
Trigger: GCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGT...TCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEARPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATACGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIRPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGGCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: GLLPSLEGESLVPSGDGEGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...CTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000519224.5
ENST00000522295.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: VSPWDPLVQAVGHSWAPRGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...CCGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: QVSPWDPLVQAVGHSWAPWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...AGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGALALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp ACCTCCCCACTCTCGCCCAATGGTGAGGGCATGGGTGGCTCAAGGAACGCTCTGGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: TSPLSPNGEGMGGSRNALVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...CAGAGCGTTCCTTGAGCCACCCATGCCCTCACCATTGGGCGAGAGTGGGGAGGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCGACATCCAGCAGGAGTaGGGCCCCGAGCGTGGGGTC +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGDIQQE*GPERGV
Trigger: GACCCCACGCTCGGGGCCCCACTCCTGCTGGATGTC...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGACAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCCCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAPSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGGG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS-3UTR TCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: EGESLVPSGDGESSGMSEMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp TGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: WREKAWSPQGMESLLGCQLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...CTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGAGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: LDRQLRLTPLWNQGLHQGVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...TCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp TGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: CHHWREKAWSPQGMESLLGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...CAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp ATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: ITGGRKPGPLRGWRVFWDWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...ATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGCCAGCGCCCATAGCTTaGCGAGGAAGGCAGGCACGG +
Preference number: 4 (lower is better)
Translates to: ALEPRAASRTAPCPSPSGPAPIA*RGRQAR
Trigger: CCGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGG...CCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGGATCAGGTGGTCTGTaGCTGGGTCCCCCACCAGCG +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRGSGGL*LGPPPA
Trigger: CGCTGGTGGGGGACCCAGGCACAGACCACCTGATCC...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGCGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCG +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLRTKLG*WNSTWS
Trigger: CGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCG...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGAGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: LDRQLRLTPLWNQGLHQGGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...TCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: PAITGGRKPGPLRGWRVFPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...GAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTCTTCTTTGAGCAGTaGCAGGCCCTTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLFFEQ*QALLPP
Trigger: AGGAGGGAGAAGGGCCTGGCACTGCTCAAAGAAGAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS-3UTR CCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGCTGGCGCTTCCTGCATaGTGCAGTCTCGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRLALPA*CSLGPA
Trigger: AGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAG...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCTGGCGCTTCCTGCATaGTGCAGTCTCGGCCCGGCT +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGLALPA*CSLGPA
Trigger: AGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAG...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTGGGACTGCGCTCACCAGGGGAAATGTTCCCCCTCCTTTCTTCAGGGAAGGAGCGCTTACGAGGAAACTaGTCCCGCTCGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VGLRSPGEMFPLLSSGKERLRGN*SRSGSS
Trigger: GCTGGAGCCCGAGCGGGACCAGTTTCCTCGTAAGCG...CTCCTTCCCTGAAGAAAGGAGGGGGAACATTTCCCCTGGTGAGCGCAGTCCCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGLAKRL*SLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAA...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGGGCCCCTGGCCCTGTGAGGCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GWRVFWDVRDDGAPGPVRRPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...CCTCACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAGAAGACTCTCCATCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GSPRSGTKGCIKDSSMSKRPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...CTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GAGACACTGGATCAGCTTGCCAATGACCCGGTGCTGCTGACCGTGGCTCTGCCGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: ETLDQLANDPVLLTVALPLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CGGCAGAGCCACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEALSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATACTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAILSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: RDWLPGPSRRQSGSQECYLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...ATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVCQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: QLRLTPLWNQGLHQGQLHLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...ATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGACTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: GLGEFNPLTASSGSPRSGLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...TCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
61% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGARLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGCAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 9 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGTGGGGCCCCGAGCGTaGGGTCCTTCCCAAGGACAG +
Preference number: 4 (lower is better)
Translates to: QGQLHVQVHQGPFSPLETVGPRA*GPSQGQ
Trigger: CTGTCCTTGGGAAGGACCCCACGCTCGGGGCCCCAC...AGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521624.5
CDS-3UTR TCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGAAAACCGTACATGTTaGGTTGGCGCACGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARENRTC*VGARSS
Trigger: CGAGCTTCGTGCGCCAACTCAACATGTACGGTTTTC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGAAAACCGTACATGTTaGGTTGGCGCACGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVENRTC*VGARSS
Trigger: CGAGCTTCGTGCGCCAACTCAACATGTACGGTTTTC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTGAAAACCGTACATGTTaGGTTGGCGCACGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: PPAQAHPALEPRAASRTAENRTC*VGARSS
Trigger: CGAGCTTCGTGCGCCAACTCAACATGTACGGTTTTC...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCGAAAACCGTACATGTTaGGTTGGCGCACGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: ASSGSPRSGTKGCIKDSSENRTC*VGARSS
Trigger: CGAGCTTCGTGCGCCAACTCAACATGTACGGTTTTC...GGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: RAASRTAPCPSPSGSILAGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTTGGGCCCCTCGGGGCTaGAGCTCCCTTTCCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QGQLHVQVHQGPFSPLETWAPRG*SSLSLP
Trigger: TGGAAGGGAAAGGGAGCTTCAGCCCCGAGGGGCCCA...AGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp TGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCAGCGCTTCCTGCATGGTaGAGTCTCGGCCCGGCTCTG +
Preference number: 4 (lower is better)
Translates to: WNQGLHQGQLHVQVHQGPALPAW*SLGPAL
Trigger: CAGAGCCGGGCCGAGACTGCACCATGCAGGAAGCGC...TGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp GGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGCTCGCCATGTTGCTATaGTTGAAATACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: GCAAADWFQAPSEARGLRLAMLL*LKYWGS
Trigger: GCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAG...CCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PRAASRTAPCPSPSGSILASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...GAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGGCCTCGGTGCTCTCCTaGACTCCCCGCAAAGCCTGC +
Preference number: 4 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKASVLS*TPRKAC
Trigger: GCAGGCTTTGCGGGGAGTGCAGGAGAGCACCGAGGC...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 18 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCCTTCCAGGATGGCCTaGACCACAGCCACAGGCAGT +
Preference number: 4 (lower is better)
Translates to: QSGSQECYKWLKPQAGPGPSRMA*TTATGS
Trigger: ACTGCCTGTGGCTGTGGTGCAGGCCATCCTGGAAGG...CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGGCCCTTCTCCCTCCTaGCATCACTGGAGGGAGAAA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGGPSPS*HHWREK
Trigger: TTTCTCCCTCCAGTGATGGCAGGAGGGAGAAGGGCC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
60% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS-3UTR GCA 90 bp GCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGAGGGAAGGAGAGCCCTaGCCGCCTGCCTTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: ALEPRAASRTAPCPSPSGREGEP*PPAFCS
Trigger: TGAGCAGAAGGCAGGCGGGCAGGGCTCTCCTTCCCT...CCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp GAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGCGTGGGCAGCGCAGCTaGCGCTTCCTGCATGGTGCA +
Preference number: 4 (lower is better)
Translates to: ESLVPSGDGESSGMSEMMRGQRS*RFLHGA
Trigger: TGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACG...CATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp CAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: QGLHQGQLHVQVHQGPFSLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...CGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGCTCCAGCGGATCAGGTaGTCTGTGCCTGGGTCCCCC +
Preference number: 4 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLLQRIR*SVPGSP
Trigger: GGGGGACCCAGGCACAGACCACCTGATCCGCTGGAG...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp TCATCCAGCATCAGGGACAGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: SSSIRDSFLLPPALLGPAGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...GGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGATGCTGGATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PAITGGRKPGPLRGWRVFLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...GAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: GCIKDSSMSKSIRVHSRPPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...AGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATATGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAICQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCCQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGACQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp TGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: CHHWREKAWSPQGMESLLLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: DVQRRTGSKPLQRRGVLGQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...CCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLCAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGCCATGTTGCTATGCTTaGAATACTGGGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: GCAAADWFQAPSEARGLRPCCYA*NTGAAL
Trigger: AAGTGCTGCCCCAGTATTTCAAGCATAGCAACATGG...CCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCCATGTTGCTATGCTTaGAATACTGGGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGPCCYA*NTGAAL
Trigger: AAGTGCTGCCCCAGTATTTCAAGCATAGCAACATGG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGGAAAACCGTACATGTTaGGTTGGCGCACGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAENRTC*VGARSS
Trigger: CGAGCTTCGTGCGCCAACTCAACATGTACGGTTTTC...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR TCA 90 bp CAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGT +
Preference number: 4 (lower is better)
Translates to: QGLHQGQLHVQVHQGPFSMTRCC*PWLCRS
Trigger: ACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCAT...CGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp ATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGGATCAGCTTGCCAATaGCCCGGTGCTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: ITGGRKPGPLRGWRVFWDGSACQ*PGAADR
Trigger: ACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCC...ATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp GCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGGGATCAGCTTGCCAATaGCCCGGTGCTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: ALEPRAASRTAPCPSPSGGSACQ*PGAADR
Trigger: ACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCC...CCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp TGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCAGGGCCCCTGGCCCTGTaGGGGCTAAGGCCCAAATTT +
Preference number: 4 (lower is better)
Translates to: WNQGLHQGQLHVQVHQGPGPLAL*GLRPKF
Trigger: AAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCC...TGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
59% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCTCGCCATGTTGCTATaGTTGAAATACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARLAMLL*LKYWGS
Trigger: GCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: GCIKDSSMSKSIRVHSRPSCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...AGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: GCIKDSSMSKSIRVHSRPLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...AGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGSGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp CAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: QLRLTPLWNQGLHQGQLHKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...ATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 9 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: CAAADWFQAPSEARGLRGKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 4 transcripts:
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEALAKRL*SLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAA...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTCTATGCTTGAAATACTaGGGCAGCACTTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLLCLKY*GSTSLA
Trigger: CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTATGCTTGAAATACTaGGGCAGCACTTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGLCLKY*GSTSLA
Trigger: CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTATGCTTGAAATACTaGGGCAGCACTTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLCLKY*GSTSLA
Trigger: CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGTGCTGGAACTCGACGTaGTCGCGCTCCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QGLHQGQLHVQVHQGPFSCWNST*SRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCA...CGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTTGCTGGAACTCGACGTaGTCGCGCTCCGGCCTAAGC +
Preference number: 4 (lower is better)
Translates to: QGQLHVQVHQGPFSPLETCWNST*SRSGLS
Trigger: GCTTAGGCCGGAGCGCGACCACGTCGAGTTCCAGCA...AGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGACGAAGCTCGGGTGCTaGAACTCGACGTGGTCGCGC +
Preference number: 4 (lower is better)
Translates to: LHQGQLHVQVHQGPFSPLTKLGC*NSTWSR
Trigger: GCGCGACCACGTCGAGTTCCAGCACCCGAGCTTCGT...CAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGCTTCCATCTTCTCTTCCGACTGGATGAAGTAGGGGTCCTGCAGAAGGGCACCCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGAT +
Preference number: 4 (lower is better)
Translates to: GFHLLFRLDEVGVLQKGTRPRLK*PKETLD
Trigger: ATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCG...GGTGCCCTTCTGCAGGACCCCTACTTCATCCAGTCGGAAGAGAAGATGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519224.5
CDS-3UTR CCA 90 bp GTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: VSPWDPLVQAVGHSWAPRAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...CCGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTGCCCAAATTTGTCTCTaGGAGAGGCGACTGGATGAA +
Preference number: 4 (lower is better)
Translates to: EGCAAADWFQAPSEARGLAQICL*ERRLDE
Trigger: TTCATCCAGTCGCCTCTCCCAGAGACAAATTTGGGC...AAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp ATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGGCTCCTGCCATCACTaGAGGGAGAAAGCCTGGTCC +
Preference number: 4 (lower is better)
Translates to: ITGGRKPGPLRGWRVFWDGSCHH*REKAWS
Trigger: GGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCC...ATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519224.5
ENST00000522295.5
CDS-3UTR CCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCTGGTTCAGGCTGTTaGGCATTCCTGGGCCCCTCG +
Preference number: 4 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKPGSGC*AFLGPS
Trigger: CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGG...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGCQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGCTCGCCCTTGGAGACTaGGGCCCAGCACATCTAGAG +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRLALGD*GPAHLE
Trigger: CTCTAGATGTGCTGGGCCCCAGTCTCCAAGGGCGAG...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGTCCATTCTCGCCCTTaGAGACTGGGGCCCAGCACA +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPVHSRP*RLGPST
Trigger: TGTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGAC...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: NPLTASSGSPRSGTKGCIQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...GATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PPAQAHPALEPRAASRTAQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGAGATGATGGGGCCCCTGGCCCTGTGAGGGCTAAGGCCCAAATTTGTCTCTGGGCCCAAATTTGTCTCTaGGAGAGGCTGGGCCAGGTC +
Preference number: 4 (lower is better)
Translates to: RDDGAPGPVRAKAQICLWAQICL*ERLGQV
Trigger: GACCTGGCCCAGCCTCTCCCAGAGACAAATTTGGGC...CCAGAGACAAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCCCATCATCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519224.5
CDS-3UTR TCA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGGGATCAGCTTGCCAATaGCCCGGTGCTGCTGACCGT +
Preference number: 4 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLEGSACQ*PGAADR
Trigger: ACGGTCAGCAGCACCGGGTCATTGGCAAGCTGATCC...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp ACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTTTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACAC +
Preference number: 4 (lower is better)
Translates to: TKGCIKDSSMSKSIRVHSLLGPA*SGPKRH
Trigger: GTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAA...AGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGGCAGGTGTTGGGCATaGGCTCCCCTCATCCAGCAT +
Preference number: 4 (lower is better)
Translates to: QGQLHVQVHQGPFSPLETGRCWA*APLIQH
Trigger: ATGCTGGATGAGGGGAGCTCATGCCCAACACCTGCC...AGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACGCACGAAGCTCGGGTaGTGGAACTCGACGTGGTCG +
Preference number: 4 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRRTKLG*WNSTWS
Trigger: CGACCACGTCGAGTTCCAGCACCCGAGCTTCGTGCG...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp TGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCAACTCCCCGCAAAGCCTaGACCTCGCCCAGTAGTCGA +
Preference number: 4 (lower is better)
Translates to: WNQGLHQGQLHVQVHQGPTPRKA*TSPSSR
Trigger: TCGACTACTGGGCGAGGTGCAGGCTTTGCGGGGAGT...TGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTG +
Preference number: 4 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLSCLLH*SAPPEV
Trigger: CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGA...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: RAASRTAPCPSPSGSILAGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCTGGCTTCCATCTTCTCTTCCGACTGGATGAAGTAGGGGTCCTGCAGAAGGGCGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: AGFHLLFRLDEVGVLQKGGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...GCCCTTCTGCAGGACCCCTACTTCATCCAGTCGGAAGAGAAGATGGAAGCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000519224.5
CDS-3UTR GCA 90 bp GGGCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GLLPSLEGESLVPSGDGESGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522295.5
CDS-3UTR GCA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: QEGCAAADWFQAPSEARGSGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGAGGAACGCTCTGCAGTaGAGCCTGAACTCAGGATTT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGARNALQ*SLNSGF
Trigger: AAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTCCT...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGLAKRL*SLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAA...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp GCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: APAITGGRKPGPLRGWRVGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...GACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519224.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TTCCCTAGGAGAAGTGGGACTGCGCTCACCAGGGGAAATGTTCCCCCTCCTTTCGGTCCCCTCAGGGGATaGAGAGTCTTCTGGGATGTC +
Preference number: 4 (lower is better)
Translates to: FPRRSGTALTRGNVPPPFGPLRG*RVFWDV
Trigger: GACATCCCAGAAGACTCTCCATCCCCTGAGGGGACC...GAAAGGAGGGGGAACATTTCCCCTGGTGAGCGCAGTCCCACTTCTCCTAGGGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTATGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp ATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: ITGGRKPGPLRGWRVFWDLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...ATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCACTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: QSGSQECYKWLKPQAGPGCQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTAGGCAGCAGACTCTCTaGGCTCCTGTCCCCGCTTTC +
Preference number: 4 (lower is better)
Translates to: QGQLHVQVHQGPFSPLETRQQTL*APVPAF
Trigger: GAAAGCGGGGACAGGAGCCCAGAGAGTCTGCTGCCT...AGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp AGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RQSGSQECYKWLKPQAGPRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...TGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGAGGCTCACCCCGCTCTaGAACCAAGGGCTGCATCAA +
Preference number: 4 (lower is better)
Translates to: RSGTKGCIKDSSMSKSIRRLTPL*NQGLHQ
Trigger: TTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCT...CCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEAQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLECAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATCCATGTTGCTATGCTTaGAATACTGGGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: RDWLPGPSRRQSGSQECYPCCYA*NTGAAL
Trigger: AAGTGCTGCCCCAGTATTTCAAGCATAGCAACATGG...ATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp GAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGTAGAGGGCAGGTGTTaGACTTGGCAGGTGTTGGGC +
Preference number: 4 (lower is better)
Translates to: ESLVPSGDGESSGMSEMMVEGRC*TWQVLG
Trigger: GCCCAACACCTGCCAAGTTCAACACCTGCCCTCTAC...CATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR TCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGTCTCTTCCGACTGGATaGAGTAGGGGTCCTGCAGAA +
Preference number: 4 (lower is better)
Translates to: EGESLVPSGDGESSGMSESLPTG*SRGPAE
Trigger: TTCTGCAGGACCCCTACTTCATCCAGTCGGAAGAGA...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519224.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGCTCGCCATGTTGCTATaGTTGAAATACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGLAMLL*LKYWGS
Trigger: GCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAG...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTAAGCAGGCCGCCCTaGTCGATGCTCACCACCTTC +
Preference number: 4 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRLSRPP*SMLTTF
Trigger: GAAGGTGGTGAGCATCGAGCAGGGCGGCCTGCTTAG...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATCTTTCTCTTGCCTCCTaGATTGCTCGGCCCCGCCTG +
Preference number: 4 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDLSLAS*IARPRL
Trigger: CAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAG...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp GCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTGCAAATTGCAGATTGCCCCCGGGACAGCTTTCTCTTaGCTCCTGCATTGCTCGGCC +
Preference number: 4 (lower is better)
Translates to: ALQCSLNSGFPCKLQIAPGTAFS*LLHCSA
Trigger: GGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCC...GGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR GCA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GSQEGCAAADWFQAPSEASGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGASGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: SQEGCAAADWFQAPSEARKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp GGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTCTCTTCTTTGAGCAGTaGCAGGCCCTTCTCCCTCCT +
Preference number: 4 (lower is better)
Translates to: GCIKDSSMSKSIRVHSRPLFFEQ*QALLPP
Trigger: AGGAGGGAGAAGGGCCTGGCACTGCTCAAAGAAGAG...AGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGATTTCCCTGCAAATTaGAGATTGCCCCCTCACTCA +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGADFPAN*RLPPHS
Trigger: TGAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: EGESLVPSGDGESSGMSEGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: PVRYLPGIPWFRLLGIPGGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGGATGGAGAGTCTTCTaGGATGTCAGAGATGATGGG +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGGWRVF*DVRDDG
Trigger: CCCATCATCTCTGACATCCCAGAAGACTCTCCATCC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
57% GC, longest homopolymer 7 nt, total homopolymer stretches 17 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CCA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATTGGAGGGAGAAAGCCTaGTCCCCTCAGGGGATGGAG +
Preference number: 4 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDWREKA*SPQGME
Trigger: CTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CCA 90 bp CCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCTTTCCCTTCCAGGATaGCCTGCACCACAGCCACAG +
Preference number: 4 (lower is better)
Translates to: PGPSRRQSGSQECYKWLKLSLPG*PAPQPQ
Trigger: CTGTGGCTGTGGTGCAGGCCATCCTGGAAGGGAAAG...CTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCCTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: PRAASRTAPCPSPSGSILLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...GAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GSPRSGTKGCIKDSSMSKQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...CTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGTCTCTGGGAGAGGCTaGGCCAGGTCTAAGGGAGAA +
Preference number: 4 (lower is better)
Translates to: ESLVPSGDGESSGMSEMMVSGRG*ARSKGE
Trigger: TTCTCCCTTAGACCTGGCCCAGCCTCTCCCAGAGAC...CATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000519224.5
CDS-3UTR TCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCGAAAACCGTACATGTTaGGTTGGCGCACGAAGCTCG +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGENRTC*VGARSS
Trigger: CGAGCTTCGTGCGCCAACTCAACATGTACGGTTTTC...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp CAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: QGQLHVQVHQGPFSPLETENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...AGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GGATGGAGAGTCTTCTGGGATGTCAGAGATGATGGGGCCCCTGGCCCTGTGAGGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: GWRVFWDVRDDGAPGPVRSGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CCTCACAGGGCCAGGGGCCCCATCATCTCTGACATCCCAGAAGACTCTCCATCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp AGGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: RDWLPGPSRRQSGSQECYKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...ATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp GCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: APAITGGRKPGPLRGWRVKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...GACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000522295.5
CDS-3UTR GCA 90 bp GGGTCCTTCCCTAGGAGAAGTGGGACTGCGCTCACCAGGGGAAATGTTCCCCCTAACTCAGGATTTCCCTaGAAATTGCAGATTGCCCCC +
Preference number: 4 (lower is better)
Translates to: GSFPRRSGTALTRGNVPPNSGFP*KLQIAP
Trigger: GGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTT...AGGGGGAACATTTCCCCTGGTGAGCGCAGTCCCACTTCTCCTAGGGAAGGACCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: RAASRTAPCPSPSGSILALAKRL*SLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAA...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCTCAGCCCAATCACGGCGTCCTCCCAGGTAGGAGTCATCACAACCATTACCTGTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTG +
Preference number: 4 (lower is better)
Translates to: AQPNHGVLPGRSHHNHYLLAKRL*SLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAA...CAGGTAATGGTTGTGATGACTCCTACCTGGGAGGACGCCGTGATTGGGCTGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGCTATGCTTGAAATACTaGGGCAGCACTTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWLCLKY*GSTSLA
Trigger: CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp TGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGCTATGCTTGAAATACTaGGGCAGCACTTCCTTGGCG +
Preference number: 4 (lower is better)
Translates to: CHHWREKAWSPQGMESLLLCLKY*GSTSLA
Trigger: CGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG...CAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522295.5
CDS-3UTR CCA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTCCCTGGGATCCCCTaGTTCAGGCTGTTGGGCATT +
Preference number: 4 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRLPGIP*FRLLGI
Trigger: AATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAG...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp CTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: LHQGQLHVQVHQGPFSPLCQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...CAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTGCAAATTGCAGATTGCCCCCTGTCAGGTATCTCCCTaGGATCCCCTGGTTCAGGCT +
Preference number: 4 (lower is better)
Translates to: ALQCSLNSGFPCKLQIAPCQVSP*DPLVQA
Trigger: AGCCTGAACCAGGGGATCCCAGGGAGATACCTGACA...GGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp GAACGCTCTGCAGTGCAGCCTGAACTCAGGATTTCCCTGCAAATTGCAGATTGCTGTGCAGCGGCGGACTaGTTCCAAGCCCCTTCAGAG +
Preference number: 4 (lower is better)
Translates to: ERSAVQPELRISLQIADCCAAAD*FQAPSE
Trigger: CTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA...GCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAGAGCGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR TCA 90 bp ACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCAC +
Preference number: 4 (lower is better)
Translates to: TKGCIKDSSMSKSIRVHSENLTP*PPAQAH
Trigger: GTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTC...AGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR TCA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATCTAAGGGAGAAGGTTTaGGGGAGGAGGCTCAGTCCA +
Preference number: 4 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDLREKV*GRRLSP
Trigger: TGGACTGAGCCTCCTCCCTCAAACCTTCTCCCTTAG...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000519224.5
CDS-3UTR GCA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWSGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATAAGCCAAGAAGGATGTaGAGCGGCGGACTGGTTCCA +
Preference number: 4 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDKPRRM*SGGLVP
Trigger: TGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR GCA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: VVERGHLVVGASLTPDRGKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 23 nt.
Matches the following 7 transcripts:
ENST00000520304.5
ENST00000521374.6
ENST00000521624.5
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR GCA 90 bp TCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGCTGTGCCCGCCTGCCTTCTaGTCAGTTAGGATAAAACAT +
Preference number: 4 (lower is better)
Translates to: SGSQECYKWLKPQAGPGLCPPAF*SVRIKH
Trigger: ATGTTTTATCCTAACTGAGCAGAAGGCAGGCGGGCA...CAGCCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CCA 90 bp CTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGGCCCAAAGAGACACTaGATCAGCTTGCCAATGACC +
Preference number: 4 (lower is better)
Translates to: LHQGQLHVQVHQGPFSPLGPKRH*ISLPMT
Trigger: GGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCC...CAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CCA 90 bp GGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTCAGGAGTGCTATAAATaGTTAAAGCCCCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: GCIKDSSMSKSIRVHSRPQECYK*LKPQAG
Trigger: GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTG...AGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGCTCGCCATGTTGCTATaGTTGAAATACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: LHQGQLHVQVHQGPFSPLLAMLL*LKYWGS
Trigger: GCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAG...CAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGACTGCTCGCCATGTTGCTATaGTTGAAATACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: KDSSMSKSIRVHSRPWRLLAMLL*LKYWGS
Trigger: GCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAG...CAGTCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCTCGCCATGTTGCTATaGTTGAAATACTGGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QGLHQGQLHVQVHQGPFSLAMLL*LKYWGS
Trigger: GCTGCCCCAGTATTTCAAGCATAGCAACATGGCGAG...CGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp TTCCCTAGGAGAAGTGGGACTGCGCTCACCAGGGGAAATGTTCCCCCTCCTTTCCTGCAAATTGCAGATTaGCCCCTCACTCAATCAAGG +
Preference number: 4 (lower is better)
Translates to: FPRRSGTALTRGNVPPPFLQIAD*PLTQSR
Trigger: CCTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAG...GAAAGGAGGGGGAACATTTCCCCTGGTGAGCGCAGTCCCACTTCTCCTAGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR TCA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGCCATGTTGCTATGCTTaGAATACTGGGGCAGCACTT +
Preference number: 4 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLEPCCYA*NTGAAL
Trigger: AAGTGCTGCCCCAGTATTTCAAGCATAGCAACATGG...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTATCCGGCTCTCAGGAGTaGTATAAATGGTTAAAGCCC +
Preference number: 4 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLSGSQE*YKWLKP
Trigger: GGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGA...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR GCA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCAAAACGGAGTTTATGTaGAGGGATAGTCGGGGTAGT +
Preference number: 4 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGKTEFM*RDSRGS
Trigger: ACTACCCCGACTATCCCTGCACATAAACTCCGTTTT...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
3UTR CAA 72 bp CTGCAGTGCAGCCTGAACTCAGGATTTCCCTGCAAATaGCAGATTGCCCCCTCACTCAATCAAGGTAGCTCA +
Preference number: 4 (lower is better)
Translates to: LQCSLNSGFPCK*QIAPSLNQGSS
Trigger: TGAGCTACCTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATCCTGAGTTCAGGCTGCACTGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS GCA 90 bp GCTCGGGCCCGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAGTGCTaGGTTTGCCGCCCGCTCCGCCCTACTCCGCCCCGGGGCGCCGGG +
Preference number: 5 (lower is better)
Translates to: ARARPLRARQSRGKC*VCRPLRPTPPRGAG
Trigger: CCCGGCGCCCCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGCCCGAGC
79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 90 bp GCCCGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAGTGCTGCGTTTaGCGCCCGCTCCGCCCTACTCCGCCCCGGGGCGCCGGGTCAGGC +
Preference number: 5 (lower is better)
Translates to: ARPLRARQSRGKCCV*RPLRPTPPRGAGSG
Trigger: GCCTGACCCGGCGCCCCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 90 bp TGCGCTCGGGCCCGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAGTaGTGCGTTTGCCGCCCGCTCCGCCCTACTCCGCCCCGGGGCGCC +
Preference number: 5 (lower is better)
Translates to: CARARPLRARQSRGK*CVCRPLRPTPPRGA
Trigger: GGCGCCCCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGCCCGAGCGCA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS-3UTR CAA 90 bp GGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GPPKAAWTSSRSGAPSVGRSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...CCCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS GCA 90 bp CAGCGCAGCTGGCGCTTCCTGCATGGTGCAGTCTCGGCCCGGCTCTaGGCTCGGGCCCGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAG +
Preference number: 5 (lower is better)
Translates to: QRSWRFLHGAVSARL*ARARPLRARQSRGK
Trigger: CTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGCCCGAGCGCAGAGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAGCTGCGCTG
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000522023.1
ENST00000522295.5
ENST00000522870.5
CDS GCA 90 bp TGCATGGTGCAGTCTCGGCCCGGCTCTGCGCTCGGGCCCGGCCGCTaGGGGCTCGTCAAAGCCGCGGAAAGTGCTGCGTTTGCCGCCCGC +
Preference number: 5 (lower is better)
Translates to: CMVQSRPGSALGPGR*GLVKAAESAAFAAR
Trigger: GCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGCCCGAGCGCAGAGCCGGGCCGAGACTGCACCATGCA
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS-3UTR CAA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGTGGGGCAGCACTTCCTaGGCGAAACGGCTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWWGSTS*AKRLWS
Trigger: CGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCA...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp TTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: FNPLTASSGSPRSGTKGCRSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: GSQEGCAAADWFQAPSEARSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS GCA 90 bp GCCCGCTCACGGCCAGTCCTGCGCTCCAGCGCGCGCACACACTCATaGTCACTCTTGGGTCCAGGCCTGCCGCTTACGGGGATATGGGTC +
Preference number: 5 (lower is better)
Translates to: ARSRPVLRSSARTHS*SLLGPGLPLTGIWV
Trigger: GACCCATATCCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGAGCATGAGTGTGTGCGCGCGCTGGAGCGCAGGACTGGCCGTGAGCGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 90 bp GGCCAGTCCTGCGCTCCAGCGCGCGCACACACTCATGCTCACTCTTaGGTCCAGGCCTGCCGCTTACGGGGATATGGGTCGAGGCCAGGC +
Preference number: 5 (lower is better)
Translates to: GQSCAPARAHTHAHS*VQACRLRGYGSRPG
Trigger: GCCTGGCCTCGACCCATATCCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGAGCATGAGTGTGTGCGCGCGCTGGAGCGCAGGACTGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS-3UTR CAA 90 bp CAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: QLRLTPLWNQGLHQGQLHRSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...ATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: LGLPRPPGHPAGVGPRAWRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...CCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: WASQGRLDIQQEWGPERGRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GCTGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: AGPPKAAWTSSRSGAPSVRDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...CACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: CAAADWFQAPSEARGLRGGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
68% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS CCA 90 bp GCAGCACTTCCTTGGCGAAACGGCTCTGGTCGCTTACGAGGAAACTaGTCCCGCTCTACCAAGAACGCCGCCCGCCCACCGTGCGGGCGG +
Preference number: 5 (lower is better)
Translates to: AALPWRNGSGRLRGN*SRSTKNAARPPCGR
Trigger: CCGCCCGCACGGTGGGCGGGCGGCGTTCTTGGTAGAGCGGGACCAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS-3UTR CAA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGACCAGCGCCCATAGCTaGCCGAGGAAGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGTSAHS*PRKAGT
Trigger: CGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGGT...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS CCA 90 bp CACTCATGCTCACTCTTGGGTCCAGGCCTGCCGCTTACGGGGATATaGGTCGAGGCCAGGCCAGAACGGGCTCCGAGGCCTAGCCTGGAG +
Preference number: 5 (lower is better)
Translates to: HSCSLLGPGLPLTGI*VEARPERAPRPSLE
Trigger: CTCCAGGCTAGGCCTCGGAGCCCGTTCTGGCCTGGCCTCGACCCATATCCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGAGCATGAGTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS-3UTR CAA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTACCAGCGCCCATAGCTaGCCGAGGAAGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: QEGCAAADWFQAPSEARGTSAHS*PRKAGT
Trigger: CGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGGT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp AGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: RAASRTAPCPSPSGSILARSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...GGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GGTATCTCCCTGGGATCCCCTGGTTCAGGCTGTTGGGCATTCCTGGGCCCCTCGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: GISLGSPGSGCWAFLGPSGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CGAGGGGCCCAGGAATGCCCAACAGCCTGAACCAGGGGATCCCAGGGAGATACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGAGAAGTCACACTCGTTaGGGGCCAGGGCCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: SQEGCAAADWFQAPSEARRSHTR*GPGPAR
Trigger: CCGGGCTGGCCCTGGCCCCAAACGAGTGTGACTTCT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS TCA 90 bp GCCAGGCCAGAACGGGCTCCGAGGCCTAGCCTGGAGCGACCACAGTaGGTCCCTACCCCCAGCCAGACCCTGACTCCATACTCAGTTCTC +
Preference number: 5 (lower is better)
Translates to: ARPERAPRPSLERPQ*VPTPSQTLTPYSVL
Trigger: GAGAACTGAGTATGGAGTCAGGGTCTGGCTGGGGGTAGGGACTCACTGTGGTCGCTCCAGGCTAGGCCTCGGAGCCCGTTCTGGCCTGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS-3UTR CAA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTGGGGCAGCACTTCCTaGGCGAAACGGCTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVWGSTS*AKRLWS
Trigger: CGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCA...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp CCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTTGGGGCAGCACTTCCTaGGCGAAACGGCTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PPAQAHPALEPRAASRTAWGSTS*AKRLWS
Trigger: CGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCA...AGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp TGGGCCTCCCAAGGCCGCCTGGACATCCAGCAGGAGTGGGGCCCCGAGCGTGGGGCCATGTTGCTATGCTaGAAATACTGGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: WASQGRLDIQQEWGPERGAMLLC*KYWGST
Trigger: AGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGC...CCCACGCTCGGGGCCCCACTCCTGCTGGATGTCCAGGCGGCCTTGGGAGGCCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGCGCAGCGCGGGCACCTaGCGCCGCACGCGCTCCAGT +
Preference number: 5 (lower is better)
Translates to: ESLVPSGDGESSGMSEMMRSAGT*RRTRSS
Trigger: ACTGGAGCGCGTGCGGCGCAAGGTGCCCGCGCTGCG...CATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCCTGGCCGGCTCTTCTTaGAGCAGTGCCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVLAGSS*SSARPF
Trigger: GAAGGGCCTGGCACTGCTCAAAGAAGAGCCGGCCAG...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000521374.6
CDS CCA 90 bp GTCACCACCTCCCGCCACAAGATCTCGTTCTGCCTGAGGAAGGGGTaGGAGGGTGCTGAGGCATCTGAGAGTTCGCCCAGTCACCACCCC +
Preference number: 5 (lower is better)
Translates to: VTTSRHKISFCLRKG*EGAEASESSPSHHP
Trigger: GGGGTGGTGACTGGGCGAACTCTCAGATGCCTCAGCACCCTCCCACCCCTTCCTCAGGCAGAACGAGATCTTGTGGCGGGAGGTGGTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517680.5
ENST00000522027.5
ENST00000522870.5
ENST00000683295.1
ENST00000684701.1
CDS-3UTR CAA 90 bp GGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGACCAGCGCCCATAGCTaGCCGAGGAAGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: GSPRSGTKGCIKDSSMSKTSAHS*PRKAGT
Trigger: CGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGGT...CTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGTGGGGCAGCACTTCCTaGGCGAAACGGCTCTGGTCG +
Preference number: 5 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAWGSTS*AKRLWS
Trigger: CGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCA...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp CAGGCCCAGAGGCCCCCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: QAQRPPVRYLPGIPWFRLRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...CAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGGGGGCCTCTGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp CAGGCCCAGAGGCCCCCTGTCAGGTATCTCCCTGGGATCCCCTGGTTCAGGCTGAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: QAQRPPVRYLPGIPWFRLRDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...CAGCCTGAACCAGGGGATCCCAGGGAGATACCTGACAGGGGGCCTCTGGGCCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: VVERGHLVVGASLTPDRGGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp TTCCCTGGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: FPGLGEFNPLTASSGSPRGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...GCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCCAGGGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
CDS TCA 90 bp GCAGTCCGGCTCTCAGGAGTGCTGGGCTTGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGCA +
Preference number: 5 (lower is better)
Translates to: AVRLSGVLGLENLTP*PPAQAHPALEPRAA
Trigger: TGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCCAGCACTCCTGAGAGCCGGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520304.5
CDS CCA 90 bp TGGCCTGTAGGCACAGGGAGAGCCAGAACCCCACCAACACCCACCTaGGCCAGGTCTAAGGGAGAAGGTTTGAGGGAGGAGGCTCAGTCC +
Preference number: 5 (lower is better)
Translates to: WPVGTGRARTPPTPT*ARSKGEGLREEAQS
Trigger: GGACTGAGCCTCCTCCCTCAAACCTTCTCCCTTAGACCTGGCCCAGGTGGGTGTTGGTGGGGTTCTGGCTCTCCCTGTGCCTACAGGCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517867.2
CDS-3UTR CAA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGACCAGCGCCCATAGCTaGCCGAGGAAGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWTSAHS*PRKAGT
Trigger: CGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGGT...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVRDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: CAAADWFQAPSEARGLRGRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCCCAGGGGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: QSGSQECYKWLKPQAGPGGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...CCCTGGGCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp TGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGAAGTCACACTCGTTaGGGGCCAGGGCCAGCCCGG +
Preference number: 5 (lower is better)
Translates to: WREKAWSPQGMESLLGCQRSHTR*GPGPAR
Trigger: CCGGGCTGGCCCTGGCCCCAAACGAGTGTGACTTCT...CTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CAA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGCGAAAACCGTACATGTaGAGTTGGCGCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGRKPYM*SWRTKL
Trigger: GAGCTTCGTGCGCCAACTCAACATGTACGGTTTTCG...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GCTCCTGCCATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: APAITGGRKPGPLRGWRVRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...GACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGATGGCAGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519224.5
ENST00000522295.5
CDS-3UTR CAA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GSQEGCAAADWFQAPSEARHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GGGACTGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: GTGFRAQVGGSPALRSAIRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...TATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCAGTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGARDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: GSQEGCAAADWFQAPSEARDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: AKKDVQRRTGSKPLQRRGRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...CCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp AAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: KKDVQRRTGSKPLQRRGVGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...GACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: SQEGCAAADWFQAPSEARGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGCTGGCCGGCTCTTCTTaGAGCAGTGCCAGGCCCTTC +
Preference number: 5 (lower is better)
Translates to: EGESLVPSGDGESSGMSELAGSS*SSARPF
Trigger: GAAGGGCCTGGCACTGCTCAAAGAAGAGCCGGCCAG...CTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS TCA 90 bp ATCAGGGACAGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACACTGGATCAGCGTGGCTCTGCCGAAG +
Preference number: 5 (lower is better)
Translates to: IRDSFLLPPALLGPA*SGPKRHWISVALPK
Trigger: CTTCGGCAGAGCCACGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519105.5
ENST00000683295.1
CDS TCA 90 bp GTAGGGGTCAGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACACTGGATCAGCTTGCCAATGACCCGG +
Preference number: 5 (lower is better)
Translates to: VGVSFLLPPALLGPA*SGPKRHWISLPMTR
Trigger: CCGGGTCATTGGCAAGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGACCCCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000517750.5
CDS GCA 90 bp TCCCCTCATCCAGCATCAGGGACAGCTTTCTCTTGCCTCCTGCATTaGTCGGCCCCGCCTGAAGTGGCCCAAAGAGACACTGGATCAGCG +
Preference number: 5 (lower is better)
Translates to: SPHPASGTAFSCLLH*SAPPEVAQRDTGSA
Trigger: CGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGATGCTGGATGAGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000519105.5
ENST00000683295.1
CDS CCA 90 bp GGACAGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGATCAGCGTGGCTCTGCCGAAGTGTCA +
Preference number: 5 (lower is better)
Translates to: GQLSLASCIARPRLK*PKETLDQRGSAEVS
Trigger: TGACACTTCGGCAGAGCCACGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519105.5
ENST00000683295.1
CDS-3UTR CAA 90 bp GCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTACCAGCGCCCATAGCTaGCCGAGGAAGGCAGGCACG +
Preference number: 5 (lower is better)
Translates to: AASRTAPCPSPSGSILALTSAHS*PRKAGT
Trigger: CGTGCCTGCCTTCCTCGGCAAGCTATGGGCGCTGGT...AAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp TGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTCTTAGGGGGACGAAGCTCGCCATGTaGCTATGCTTGAAATACTGG +
Preference number: 5 (lower is better)
Translates to: CAAADWFQAPSEARGLRGTKLAM*LCLKYW
Trigger: CCAGTATTTCAAGCATAGCAACATGGCGAGCTTCGT...CCCCCTAAGACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAGACACTGGATCAGCTaGCCAATGACCCGGTGCTGC +
Preference number: 5 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRHWIS*PMTRCC
Trigger: GCAGCACCGGGTCATTGGCAAGCTGATCCAGTGTCT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp TGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCAGGTCCATTCTCGCCCTaGGAGACTGGGGCCCAGCAC +
Preference number: 5 (lower is better)
Translates to: WNQGLHQGQLHVQVHQGPGPFSP*ETGAQH
Trigger: GTGCTGGGCCCCAGTCTCCAAGGGCGAGAATGGACC...TGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS CCA 90 bp CTATGCTTGAAATACTGGGGCAGCACTTCCTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTGGTCCCGCTCGGGCTCCAGCGGATC +
Preference number: 5 (lower is better)
Translates to: LCLKYWGSTSLAKRL*SLTRKLVPLGLQRI
Trigger: GATCCGCTGGAGCCCGAGCGGGACCAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000434833.6
ENST00000517685.5
ENST00000521374.6
ENST00000521624.5
ENST00000522023.1
ENST00000522295.5
ENST00000522870.5
ENST00000523562.5
ENST00000584272.5
CDS CCA 90 bp TGGCACAGAGAAAGTGCCTCTGCTTCCTACCTGGGACCTGAAGTTTaGGTGGTGGAGCTGGGGCTTTGGGACCCTTCCCCTCCCTATGCA +
Preference number: 5 (lower is better)
Translates to: WHRESASASYLGPEV*VVELGLWDPSPPYA
Trigger: TGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGCAGAGGCACTTTCTCTGTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS-3UTR CAA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGCGAAAACCGTACATGTaGAGTTGGCGCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGARKPYM*SWRTKL
Trigger: GAGCTTCGTGCGCCAACTCAACATGTACGGTTTTCG...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp TGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: WREKAWSPQGMESLLGCQRDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...CTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000519224.5
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp GGAAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: GSQEGCAAADWFQAPSEARFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...CGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: VVERGHLVVGASLTPDRGGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
59% GC, longest homopolymer 7 nt, total homopolymer stretches 21 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521916.1
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GCATCAGGGACAGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTGAAGTGGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: ASGTAFSCLLHCSAPPEVGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...CACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCTGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000521314.5
CDS-3UTR CAA 90 bp GATGATGGGGCCCCTGGCCCTGTGAGGGCTAAGGCCCAAATTTGTCTCTGGGAGGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: DDGAPGPVRAKAQICLWEGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...CTCCCAGAGACAAATTTGGGCCTTAGCCCTCACAGGGCCAGGGGCCCCATCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp AAGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGCCATGTTGCTATGCTaGAAATACTGGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: KPRRMCSGGLVPSPFRGAAMLLC*KYWGST
Trigger: AGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGC...CGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp CAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGGGTACGAAGCTCGCCATGTaGCTATGCTTGAAATACTGG +
Preference number: 5 (lower is better)
Translates to: QEGCAAADWFQAPSEARGTKLAM*LCLKYW
Trigger: CCAGTATTTCAAGCATAGCAACATGGCGAGCTTCGT...ACCCCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp AGCCAAGAAGGATGTGCAGCGGCGGACTGGTTCCAAGCCCCTTCAGAGGCGCGGACGAAGCTCGCCATGTaGCTATGCTTGAAATACTGG +
Preference number: 5 (lower is better)
Translates to: SQEGCAAADWFQAPSEARTKLAM*LCLKYW
Trigger: CCAGTATTTCAAGCATAGCAACATGGCGAGCTTCGT...CCGCGCCTCTGAAGGGGCTTGGAACCAGTCCGCCGCTGCACATCCTTCTTGGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp GGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGCGAAAACCGTACATGTaGAGTTGGCGCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: GSPRSGTKGCIKDSSMSKRKPYM*SWRTKL
Trigger: GAGCTTCGTGCGCCAACTCAACATGTACGGTTTTCG...CTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GCTCAGCCCAATCACGGCGTCCTCCCAGGTAGGAGTCATCACAACCATTACCTGAGGGACAGCTTTCTCTaGCCTCCTGCATTGCTCGGC +
Preference number: 5 (lower is better)
Translates to: AQPNHGVLPGRSHHNHYLRDSFL*PPALLG
Trigger: GCCGAGCAATGCAGGAGGCAAGAGAAAGCTGTCCCT...CAGGTAATGGTTGTGATGACTCCTACCTGGGAGGACGCCGTGATTGGGCTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CAA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: VVERGHLVVGASLTPDRGRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 20 nt.
Matches the following 8 transcripts:
ENST00000434833.6
ENST00000520304.5
ENST00000521314.5
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS CCA 90 bp CTATGCTTGAAATACTGGGGCAGCACTTCCTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTGGTCCCGCTCTACCAAGAACGCCGC +
Preference number: 5 (lower is better)
Translates to: LCLKYWGSTSLAKRL*SLTRKLVPLYQERR
Trigger: GCGGCGTTCTTGGTAGAGCGGGACCAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 90 bp GTGCCTCTGCTTCCTACCTGGGACCTGAAGTTTGGGTGGTGGAGCTaGGGCTTTGGGACCCTTCCCCTCCCTATGCAAGTATCAATATCC +
Preference number: 5 (lower is better)
Translates to: VPLLPTWDLKFGWWS*GFGTLPLPMQVSIS
Trigger: GGATATTGATACTTGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGCAGAGGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS CCA 90 bp GAGAAAGTGCCTCTGCTTCCTACCTGGGACCTGAAGTTTGGGTGGTaGAGCTGGGGCTTTGGGACCCTTCCCCTCCCTATGCAAGTATCA +
Preference number: 5 (lower is better)
Translates to: EKVPLLPTWDLKFGW*SWGFGTLPLPMQVS
Trigger: TGATACTTGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGCAGAGGCACTTTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS CCA 90 bp ACAGAGAAAGTGCCTCTGCTTCCTACCTGGGACCTGAAGTTTGGGTaGTGGAGCTGGGGCTTTGGGACCCTTCCCCTCCCTATGCAAGTA +
Preference number: 5 (lower is better)
Translates to: TEKVPLLPTWDLKFG*WSWGFGTLPLPMQV
Trigger: TACTTGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGCAGAGGCACTTTCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS-3UTR CAA 90 bp GGGCTTGGAGAATTTAACCCCTTGACCGCCAGCTCAGGCTCACCCCGCTCTGGAGCCATGTTGCTATGCTaGAAATACTGGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: GLGEFNPLTASSGSPRSGAMLLC*KYWGST
Trigger: AGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGC...TCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GTAGTGGAGAGAGGCCATTTAGTAGTGGGGGCTTCGCTCACCCCCGATAGGGGGGCCATGTTGCTATGCTaGAAATACTGGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: VVERGHLVVGASLTPDRGAMLLC*KYWGST
Trigger: AGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGC...CCCCCTATCGGGGGTGAGCGAAGCCCCCACTACTAAATGGCCTCTCTCCACTAC
57% GC, longest homopolymer 6 nt, total homopolymer stretches 20 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521374.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
ENST00000584272.5
CDS-3UTR CAA 90 bp TGGCTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGCGAAAACCGTACATGTaGAGTTGGCGCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: WLPGPSRRQSGSQECYKWRKPYM*SWRTKL
Trigger: GAGCTTCGTGCGCCAACTCAACATGTACGGTTTTCG...CCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp GTGGGACTGCGCTCACCAGGGGAAATGTTCCCCCTCCTTTCTTCAGGGAAGGAGGGATTTCCCTGCAAATaGCAGATTGCCCCCTCACTC +
Preference number: 5 (lower is better)
Translates to: VGLRSPGEMFPLLSSGKEGFPCK*QIAPSL
Trigger: GAGTGAGGGGGCAATCTGCAATTTGCAGGGAAATCC...CTCCTTCCCTGAAGAAAGGAGGGGGAACATTTCCCCTGGTGAGCGCAGTCCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS CCA 90 bp ACTCCTGCCATAAATGGCACAGAGAAAGTGCCTCTGCTTCCTACCTaGGACCTGAAGTTTGGGTGGTGGAGCTGGGGCTTTGGGACCCTT +
Preference number: 5 (lower is better)
Translates to: TPAINGTEKVPLLPT*DLKFGWWSWGFGTL
Trigger: AAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGCAGAGGCACTTTCTCTGTGCCATTTATGGCAGGAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS-3UTR CAA 90 bp GGCTCACCCCGCTCTGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGACGAAGCTCGCCATGTaGCTATGCTTGAAATACTGG +
Preference number: 5 (lower is better)
Translates to: GSPRSGTKGCIKDSSMSKTKLAM*LCLKYW
Trigger: CCAGTATTTCAAGCATAGCAACATGGCGAGCTTCGT...CTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp ATCACTGGAGGGAGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: ITGGRKPGPLRGWRVFWDRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...ATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCTCCCTCCAGTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000521314.5
ENST00000522295.5
CDS-3UTR CAA 90 bp AGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAAGCCCCAGGCAGGCAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: RRQSGSQECYKWLKPQAGRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...GCCTGCCTGGGGCTTTAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCA +
Preference number: 5 (lower is better)
Translates to: QGLHQGQLHVQVHQGPFSGEFNP*TASSGS
Trigger: TGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCC...CGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS CCA 90 bp GCTTCCTACCTGGGACCTGAAGTTTGGGTGGTGGAGCTGGGGCTTTaGGACCCTTCCCCTCCCTATGCAAGTATCAATATCCATGCTTCT +
Preference number: 5 (lower is better)
Translates to: ASYLGPEVWVVELGL*DPSPPYASINIHAS
Trigger: AGAAGCATGGATATTGATACTTGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS-3UTR CAA 90 bp TGGAACCAAGGGCTGCATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCACGAAAACCGTACATGTaGAGTTGGCGCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: WNQGLHQGQLHVQVHQGPRKPYM*SWRTKL
Trigger: GAGCTTCGTGCGCCAACTCAACATGTACGGTTTTCG...TGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATGCAGCCCTTGGTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGCGAAAACCGTACATGTaGAGTTGGCGCACGAAGCTC +
Preference number: 5 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLERKPYM*SWRTKL
Trigger: GAGCTTCGTGCGCCAACTCAACATGTACGGTTTTCG...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLERFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAAGGTTCCACACTTTCTaGAGGGGGCTGAAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLRFHTF*RGLKQH
Trigger: ATGCTGCTTCAGCCCCCTCAAGAAAGTGTGGAACCT...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CTTCCGGGCCCAAGTAGGAGGCAGTCCGGCTCTCAGGAGTGCTATAAATGGTTAGCCATGTTGCTATGCTaGAAATACTGGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LPGPSRRQSGSQECYKWLAMLLC*KYWGST
Trigger: AGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGC...TAACCATTTATAGCACTCCTGAGAGCCGGACTGCCTCCTACTTGGGCCCGGAAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000434833.6
ENST00000521624.5
ENST00000522295.5
ENST00000523562.5
CDS-3UTR CAA 90 bp CATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGCCTGCAAATTGCAGATaGCCCCCTCACTCAATCAAG +
Preference number: 5 (lower is better)
Translates to: HQGQLHVQVHQGPFSPLEPANCR*PPHSIK
Trigger: CTTGATTGAGTGAGGGGGCAATCTGCAATTTGCAGG...CTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000523562.5
CDS-3UTR CAA 90 bp AGAAAGCCTGGTCCCCTCAGGGGATGGAGAGTCTTCTGGGATGTCAGAGATGATGCCATGTTGCTATGCTaGAAATACTGGGGCAGCACT +
Preference number: 5 (lower is better)
Translates to: RKPGPLRGWRVFWDVRDDAMLLC*KYWGST
Trigger: AGTGCTGCCCCAGTATTTCAAGCATAGCAACATGGC...ATCATCTCTGACATCCCAGAAGACTCTCCATCCCCTGAGGGGACCAGGCTTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000522295.5
CDS CCA 90 bp GACAGCTGGGAAATCACTGTGACAATTCTTCTAGAGACACGGCTTTaGCTCACAGAGAACAGCTATGGACCAGAGGGCTTGACTCAGCCA +
Preference number: 5 (lower is better)
Translates to: DSWEITVTILLETRL*LTENSYGPEGLTQP
Trigger: TGGCTGAGTCAAGCCCTCTGGTCCATAGCTGTTCTCTGTGAGCCAAAGCCGTGTCTCTAGAAGAATTGTCACAGTGATTTCCCAGCTGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520833.5
ENST00000682526.1
ENST00000683295.1
CDS-3UTR CAA 90 bp ATCAAGGACAGCTCCATGTCCAAGTCCATCAGGGTCCATTCTCGCCCTTGGAGAACGAAGCTCGCCATGTaGCTATGCTTGAAATACTGG +
Preference number: 5 (lower is better)
Translates to: IKDSSMSKSIRVHSRPWRTKLAM*LCLKYW
Trigger: CCAGTATTTCAAGCATAGCAACATGGCGAGCTTCGT...TCTCCAAGGGCGAGAATGGACCCTGATGGACTTGGACATGGAGCTGTCCTTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000434833.6
ENST00000522295.5
ENST00000523562.5
CDS CAA 90 bp GGCCCGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAGTGCTGCGTTaGCCGCCCGCTCCGCCCTACTCCGCCCCGGGGCGCCGGGTCAGG +
Preference number: 6 (lower is better)
Translates to: GPAAAGSSKPRKVLR*PPAPPYSAPGRRVR
Trigger: CCTGACCCGGCGCCCCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 72 bp GCTCCGTGGGCAGCGCAGCTGGCGCTTCCTGCATGGTaGAGTCTCGGCCCGGCTCTGCGCTCGGGCCCGGCC +
Preference number: 6 (lower is better)
Translates to: APWAAQLALPAW*SLGPALRSGPA
Trigger: GGCCGGGCCCGAGCGCAGAGCCGGGCCGAGACTGCACCATGCAGGAAGCGCCAGCTGCGCTGCCCACGGAGC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000434833.6
ENST00000521314.5
ENST00000521374.6
ENST00000522023.1
ENST00000522295.5
ENST00000522870.5
CDS GCA 72 bp CTGCGGGCTCGTCAAAGCCGCGGAAAGTGCTGCGTTTaGCGCCCGCTCCGCCCTACTCCGCCCCGGGGCGCC +
Preference number: 6 (lower is better)
Translates to: LRARQSRGKCCV*RPLRPTPPRGA
Trigger: GGCGCCCCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 72 bp CGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAGTGCTaGGTTTGCCGCCCGCTCCGCCCTACTCCGCCCCGG +
Preference number: 6 (lower is better)
Translates to: RPLRARQSRGKC*VCRPLRPTPPR
Trigger: CCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 72 bp GCCCGGCCGCTGCGGGCTCGTCAAAGCCGCGGAAAGTaGTGCGTTTGCCGCCCGCTCCGCCCTACTCCGCCC +
Preference number: 6 (lower is better)
Translates to: ARPLRARQSRGK*CVCRPLRPTPP
Trigger: GGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS CAA 72 bp GCTGCGGGCTCGTCAAAGCCGCGGAAAGTGCTGCGTTaGCCGCCCGCTCCGCCCTACTCCGCCCCGGGGCGC +
Preference number: 6 (lower is better)
Translates to: AAGSSKPRKVLR*PPAPPYSAPGR
Trigger: GCGCCCCGGGGCGGAGTAGGGCGGAGCGGGCGGCAAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 72 bp CAGTCTCGGCCCGGCTCTGCGCTCGGGCCCGGCCGCTaGGGGCTCGTCAAAGCCGCGGAAAGTGCTGCGTTT +
Preference number: 6 (lower is better)
Translates to: QSRPGSALGPGR*GLVKAAESAAF
Trigger: AAACGCAGCACTTTCCGCGGCTTTGACGAGCCCGCAGCGGCCGGGCCCGAGCGCAGAGCCGGGCCGAGACTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000522870.5
CDS GCA 72 bp CGGCCAGTCCTGCGCTCCAGCGCGCGCACACACTCATaGTCACTCTTGGGTCCAGGCCTGCCGCTTACGGGG +
Preference number: 6 (lower is better)
Translates to: RPVLRSSARTHS*SLLGPGLPLTG
Trigger: CCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGAGCATGAGTGTGTGCGCGCGCTGGAGCGCAGGACTGGCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 72 bp TCCACGGCCCAGTCTCAGGAGGGGGTTGGGCGGGCATaGGTGTTCACTGACGTGGAGGGACCCCGGGACCAC +
Preference number: 6 (lower is better)
Translates to: STAQSQEGVGRA*VFTDVEGPRDH
Trigger: GTGGTCCCGGGGTCCCTCCACGTCAGTGAACACCCATGCCCGCCCAACCCCCTCCTGAGACTGGGCCGTGGA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523077.2
CDS TCA 72 bp TTGCTCGGCCCCGCCTTGCCAATGACCCGGTGCTGCTaGCCGTGGCTCTGCCGAAGTGTCACCACCTCCCGC +
Preference number: 6 (lower is better)
Translates to: LLGPALPMTRCC*PWLCRSVTTSR
Trigger: GCGGGAGGTGGTGACACTTCGGCAGAGCCACGGTCAGCAGCACCGGGTCATTGGCAAGGCGGGGCCGAGCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000517680.5
CDS CCA 72 bp TCGAGGCCAGGCCAGAACGGGCTCCGAGGCCTAGCCTaGAGCGACCACAGTGAGTCCCTACCCCCAGCCAGA +
Preference number: 6 (lower is better)
Translates to: SRPGQNGLRGLA*SDHSESLPPAR
Trigger: TCTGGCTGGGGGTAGGGACTCACTGTGGTCGCTCCAGGCTAGGCCTCGGAGCCCGTTCTGGCCTGGCCTCGA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS GCA 72 bp GCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTaGATCTGCGTGAGAACCGCAGGGAGCAGCTGGGGA +
Preference number: 6 (lower is better)
Translates to: ASSGSPRSGTKG*ICVRTAGSSWG
Trigger: TCCCCAGCTGCTCCCTGCGGTTCTCACGCAGATGCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000520833.5
ENST00000682526.1
ENST00000683295.1
CDS CCA 72 bp TCACTCTTGGGTCCAGGCCTGCCGCTTACGGGGATATaGGTCGAGGCCAGGCCAGAACGGGCTCCGAGGCCT +
Preference number: 6 (lower is better)
Translates to: SLLGPGLPLTGI*VEARPERAPRP
Trigger: AGGCCTCGGAGCCCGTTCTGGCCTGGCCTCGACCCATATCCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS GCA 72 bp CGCGCACACACTCATGCTCACTCTTGGGTCCAGGCCTaGCGCTTACGGGGATATGGGTCGAGGCCAGGCCAG +
Preference number: 6 (lower is better)
Translates to: RAHTHAHSWVQA*RLRGYGSRPGQ
Trigger: CTGGCCTGGCCTCGACCCATATCCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGAGCATGAGTGTGTGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 72 bp TGCGCTCCAGCGCGCGCACACACTCATGCTCACTCTTaGGTCCAGGCCTGCCGCTTACGGGGATATGGGTCG +
Preference number: 6 (lower is better)
Translates to: CAPARAHTHAHS*VQACRLRGYGS
Trigger: CGACCCATATCCCCGTAAGCGGCAGGCCTGGACCCAAGAGTGAGCATGAGTGTGTGCGCGCGCTGGAGCGCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 72 bp CCTTGGCGAAACGGCTCTGGTCGCTTACGAGGAAACTaGTCCCGCTCTACCAAGAACGCCGCCCGCCCACCG +
Preference number: 6 (lower is better)
Translates to: PWRNGSGRLRGN*SRSTKNAARPP
Trigger: CGGTGGGCGGGCGGCGTTCTTGGTAGAGCGGGACCAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CAA 72 bp AAATCCGGGGATCCACGGCCCAGTCTCAGGAGGGGGTaGGGCGGGCATGGGTGTTCACTGACGTGGAGGGAC +
Preference number: 6 (lower is better)
Translates to: KSGDPRPSLRRG*GGHGCSLTWRD
Trigger: GTCCCTCCACGTCAGTGAACACCCATGCCCGCCCAACCCCCTCCTGAGACTGGGCCGTGGATCCCCGGATTT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000523077.2
CDS CAA 90 bp GGCAGTCCGGCTCTCAGGAGTGCTGGGCTTGGAGAATTTAACCCCTaGACCGCCAGCTCAGGCTCACCCCGCTCTGGAACCAAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: GSPALRSAGLGEFNP*TASSGSPRSGTKGC
Trigger: GCAGCCCTTGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCCAGCACTCCTGAGAGCCGGACTGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520304.5
CDS CCA 72 bp TCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTGAAGTaGCCCAAAGAGACACTGGATCAGCGTGGCTCTGCC +
Preference number: 6 (lower is better)
Translates to: SLASCIARPRLK*PKETLDQRGSA
Trigger: GGCAGAGCCACGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519105.5
ENST00000683295.1
CDS CCA 72 bp TCCCGCCACAAGATCTCGTTCTGCCTGAGGAAGGGGTaGGAGGGTGCTGAGGCATCTGAGAGTTCGCCCAGT +
Preference number: 6 (lower is better)
Translates to: SRHKISFCLRKG*EGAEASESSPS
Trigger: ACTGGGCGAACTCTCAGATGCCTCAGCACCCTCCCACCCCTTCCTCAGGCAGAACGAGATCTTGTGGCGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000517680.5
ENST00000522027.5
ENST00000522870.5
ENST00000683295.1
ENST00000684701.1
CDS TCA 72 bp AGCTTTCTCTTGCCTCCTGCATTGCTCGGCCCCGCCTaGAGTGGCCCAAAGAGACACTGGATCAGCGTGGCT +
Preference number: 6 (lower is better)
Translates to: SFLLPPALLGPA*SGPKRHWISVA
Trigger: AGCCACGCTGATCCAGTGTCTCTTTGGGCCACTTCAGGCGGGGCCGAGCAATGCAGGAGGCAAGAGAAAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000519105.5
ENST00000683295.1
CDS TCA 72 bp CTCTCAGGAGTGCTGGGCTTGGAGAATTTAACCCCTTaGCCGCCAGCTCAGGCTCACCCCGCTCTGGAACCA +
Preference number: 6 (lower is better)
Translates to: LSGVLGLENLTP*PPAQAHPALEP
Trigger: TGGTTCCAGAGCGGGGTGAGCCTGAGCTGGCGGTCAAGGGGTTAAATTCTCCAAGCCCAGCACTCCTGAGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000520304.5
CDS TCA 72 bp GCACAGAGAAAGTGCCTCTGCTTCCTACCTGGGACCTaGAGTTTGGGTGGTGGAGCTGGGGCTTTGGGACCC +
Preference number: 6 (lower is better)
Translates to: AQRKCLCFLPGT*SLGGGAGALGP
Trigger: GGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAGCAGAGGCACTTTCTCTGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS CCA 72 bp AAATACTGGGGCAGCACTTCCTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTGGTCCCGCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: KYWGSTSLAKRL*SLTRKLVPLGL
Trigger: GAGCCCGAGCGGGACCAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCAGTATTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000434833.6
ENST00000517685.5
ENST00000521374.6
ENST00000521624.5
ENST00000522023.1
ENST00000522295.5
ENST00000522870.5
ENST00000523562.5
ENST00000584272.5
CDS CCA 72 bp CGGCCTCTGTTTTCCCATCTGTCGGATGGGGTAGGGTaGGAACTAAATGGCCTCGAAGGTCCCTCGGACTCT +
Preference number: 6 (lower is better)
Translates to: RPLFSHLSDGVG*ELNGLEGPSDS
Trigger: AGAGTCCGAGGGACCTTCGAGGCCATTTAGTTCCCACCCTACCCCATCCGACAGATGGGAAAACAGAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 72 bp CTTCCTACCTGGGACCTGAAGTTTGGGTGGTGGAGCTaGGGCTTTGGGACCCTTCCCCTCCCTATGCAAGTA +
Preference number: 6 (lower is better)
Translates to: LPTWDLKFGWWS*GFGTLPLPMQV
Trigger: TACTTGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAGGTAGGAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS CCA 72 bp AAATACTGGGGCAGCACTTCCTTGGCGAAACGGCTCTaGTCGCTTACGAGGAAACTGGTCCCGCTCTACCAA +
Preference number: 6 (lower is better)
Translates to: KYWGSTSLAKRL*SLTRKLVPLYQ
Trigger: TTGGTAGAGCGGGACCAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCAGTATTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000517867.2
ENST00000523077.2
CDS CCA 72 bp CTGGGACCTGAAGTTTGGGTGGTGGAGCTGGGGCTTTaGGACCCTTCCCCTCCCTATGCAAGTATCAATATC +
Preference number: 6 (lower is better)
Translates to: LGPEVWVVELGL*DPSPPYASINI
Trigger: GATATTGATACTTGCATAGGGAGGGGAAGGGTCCCAAAGCCCCAGCTCCACCACCCAAACTTCAGGTCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000682526.1
CDS CAA 72 bp ATGTTGCTATGCTTGAAATACTGGGGCAGCACTTCCTaGGCGAAACGGCTCTGGTCGCTTACGAGGAAACTG +
Preference number: 6 (lower is better)
Translates to: MLLCLKYWGSTS*AKRLWSLTRKL
Trigger: CAGTTTCCTCGTAAGCGACCAGAGCCGTTTCGCCAAGGAAGTGCTGCCCCAGTATTTCAAGCATAGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000434833.6
ENST00000517685.5
ENST00000517729.5
ENST00000517867.2
ENST00000521374.6
ENST00000521624.5
ENST00000522023.1
ENST00000522295.5
ENST00000522870.5
ENST00000523077.2
ENST00000523562.5
ENST00000584272.5
CDS CCA 72 bp GAAATCACTGTGACAATTCTTCTAGAGACACGGCTTTaGCTCACAGAGAACAGCTATGGACCAGAGGGCTTG +
Preference number: 6 (lower is better)
Translates to: EITVTILLETRL*LTENSYGPEGL
Trigger: CAAGCCCTCTGGTCCATAGCTGTTCTCTGTGAGCCAAAGCCGTGTCTCTAGAAGAATTGTCACAGTGATTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520833.5
ENST00000682526.1
ENST00000683295.1
CDS CAA 72 bp GGAAATCACTGTGACAATTCTTCTAGAGACACGGCTTaGGCTCACAGAGAACAGCTATGGACCAGAGGGCTT +
Preference number: 6 (lower is better)
Translates to: GNHCDNSSRDTA*AHREQLWTRGL
Trigger: AAGCCCTCTGGTCCATAGCTGTTCTCTGTGAGCCAAAGCCGTGTCTCTAGAAGAATTGTCACAGTGATTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000520833.5
ENST00000682526.1
ENST00000683295.1