RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSF1 (Homo sapiens)

Ensembl gene IDs: ENSG00000185122

Ensembl transcript IDs: ENST00000400780.8, ENST00000527328.5, ENST00000528199.5, ENST00000528838.6, ENST00000528842.1, ENST00000528988.1, ENST00000529630.1, ENST00000530661.1, ENST00000531447.2, ENST00000532338.5, ENST00000533130.1, ENST00000533240.5, ENST00000534314.5, ENST00000614796.1, ENST00000642697.1, ENST00000642717.1, ENST00000643086.1, ENST00000643099.1, ENST00000643217.1, ENST00000643870.1, ENST00000643951.1, ENST00000644444.1, ENST00000644450.1, ENST00000646061.1, ENST00000646233.1, ENST00000646252.2, ENST00000646807.1, ENST00000646970.1

Found 636 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTaGCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTG +
Preference number: 1 (lower is better)
Translates to: PSPFVLLGLWRPTHQ*PRPRGCPASPRPAL
Trigger: CAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR CCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATaGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCC +
Preference number: 1 (lower is better)
Translates to: QRCCPDPSPFVLLGL*RPTHQCPRPRGCPA
Trigger: GGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR GCA 90 bp GAAGGCAGACTGGCAGGCCAGGGTGACCCTCCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCG +
Preference number: 1 (lower is better)
Translates to: EGRLAGQGDPPDQRC*PDPSPFVLLGLWRP
Trigger: CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGGGTCACCCTGGCCTGCCAGTCTGCCTTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR CCA 90 bp CTCCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTaGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCT +
Preference number: 1 (lower is better)
Translates to: LLTRGAAQTRARLSY*GYGGRPTSAQDREA
Trigger: AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR GCA 90 bp TTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCTCTCTCTGGCTTGACCAGGCCGCCC +
Preference number: 1 (lower is better)
Translates to: LMFSRSCSWPRRKHG*WNSVSSLSGLTRPP
Trigger: GGGCGGCCTGGTCAAGCCAGAGAGAGACGACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR GCA 90 bp AGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAGTCCATAGCATCCAAGTGGTCACTG +
Preference number: 1 (lower is better)
Translates to: RALVSTLKPWLLSMV*RLSRLESIASKWSL
Trigger: CAGTGACCACTTGGATGCTATGGACTCCAACCTGGATAACCTGCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR TCA 90 bp GTGCTCCAGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCATCAGGGGGATCTTTCTCTTCACCCC +
Preference number: 1 (lower is better)
Translates to: VLQGELPAILGHGMC*ATVVQHQGDLSLHP
Trigger: GGGGTGAAGAGAAAGATCCCCCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR CCA 90 bp TTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTGTTCCCGCTCTGTAGTCCTGGCTAC +
Preference number: 1 (lower is better)
Translates to: LCLKYLGSTSLANWP*SNTWKLFPLCSPGY
Trigger: GTAGCCAGGACTACAGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CCA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCAGACAGTGGGGTCCTTaGCTTTGGGAGGCTCCGAGC +
Preference number: 2 (lower is better)
Translates to: PTHQCPRPRGCPASPRPARQWGP*LWEAPS
Trigger: GCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR CAA 90 bp AGGGTGACCCTCCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTaGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGAC +
Preference number: 2 (lower is better)
Translates to: RVTLLTRGAAQTRAR*SYWGYGGRPTSAQD
Trigger: GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGGGTCACCCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR-3UTR GCA 90 bp CCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCCAAGACCGCGAGGCTaGCCTGCCTCCCCAAGACCA +
Preference number: 2 (lower is better)
Translates to: PDQRCCPDPSPFVLLGLWPRPRG*PASPRP
Trigger: TGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGG...CCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR-3UTR GCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACACCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 2 (lower is better)
Translates to: LAGASSVMSEMMGPELATPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR CCA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGATCAGCAGGGAGATGGTaGGGTCCTCGGCGAAGCCGT +
Preference number: 2 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRSAGRW*GPRRSR
Trigger: ACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGA...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR-3UTR CCA 90 bp GCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCAGGAGCTGCTGTAGGCTaGGGAGGGGGCCGAGTAGGG +
Preference number: 2 (lower is better)
Translates to: AGASSVMSEMMGPELATAGAAVG*GGGRVG
Trigger: CCCTACTCGGCCCCCTCCCCAGCCTACAGCAGCTCC...TGCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR CCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGGAGCTGCTGTAGGCTaGGGAGGGGGCCGAGTAGGG +
Preference number: 2 (lower is better)
Translates to: LAGASSVMSEMMGPELATGAAVG*GGGRVG
Trigger: CCCTACTCGGCCCCCTCCCCAGCCTACAGCAGCTCC...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR CCA 90 bp GGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCCAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: GRSQLGDVGDDGSRAGHSQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...GCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR GCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGCCAAGACCGCGAGGCTaGCCTGCCTCCCCAAGACCA +
Preference number: 2 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWPRPRG*PASPRP
Trigger: TGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGG...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR-3UTR CCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGCCCGTTTGTCCTACTaGGGCTATGGCGGCCGACCC +
Preference number: 2 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWARLSY*GYGGRP
Trigger: GGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR-3UTR CCA 90 bp CTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGAGCTCATTCCCTGGCTaGACTTGGCCATGCGGAGAG +
Preference number: 2 (lower is better)
Translates to: LMSGTVTEGLNRSSRALVSSFPG*TWPCGE
Trigger: CTCTCCGCATGGCCAAGTCCAGCCAGGGAATGAGCT...CACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR CCA 90 bp ACCAGCTGCTTCCCTGAATCCGGGCTGCTGTTCTCTGCCTCGGGAGGCCTGGGGGGAGACAGGAGCTCTTaGATACTGGCCAGGCTGCTG +
Preference number: 2 (lower is better)
Translates to: TSCFPESGLLFSASGGLGGDRSS*ILARLL
Trigger: CAGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCC...CCCCAGGCCTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGGGAAGCAGCTGGT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR GCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGCCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTT +
Preference number: 2 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWPDQRC*PDPSPF
Trigger: AAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR-3UTR CCA 90 bp GTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTGACTGAGCTCATTCCCTaGCTGGACTTGGCCATGCGG +
Preference number: 2 (lower is better)
Translates to: VQQGTGVHAEAVAAQHGLTELIP*LDLAMR
Trigger: CCGCATGGCCAAGTCCAGCCAGGGAATGAGCTCAGT...CAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR GCA 90 bp CAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 2 (lower is better)
Translates to: QAHVGHGHRGAEQVQQGTLLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...AGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGTCCTTGGCTTTaGGAGGCTCCGAGCCTGTCA +
Preference number: 2 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGWGPWL*EAPSLS
Trigger: TGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCA...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTAGACAGTGGGGTCCTTaGCTTTGGGAGGCTCCGAGC +
Preference number: 2 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGRQWGP*LWEAPS
Trigger: GCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR-3UTR CCA 90 bp GGTCCAGCAGGAACAGCGGCTGCGCTGTGTAGTGCACCAGCTGCTTCCCTGAATTCCACGCTGAAGCCGTaGCTGCTCAGCATGGTCTGC +
Preference number: 2 (lower is better)
Translates to: GPAGTAAALCSAPAASLNSTLKP*LLSMVC
Trigger: GCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGA...ATTCAGGGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR TCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 2 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAAGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR GCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTTGCTCCAGGGAGAACTaGCGGCTATACTTGGGCATG +
Preference number: 2 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAACSREN*RLYLGM
Trigger: CATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCA...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR GCA 90 bp AGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCCCGAGATCGCACCACTaGACTCCAACCTGGGTGACA +
Preference number: 2 (lower is better)
Translates to: STWAAPPWQTGPGRTRGSPRSHH*TPTWVT
Trigger: TGTCACCCAGGTTGGAGTGCAGTGGTGCGATCTCGG...GCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CCA 90 bp GGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 2 (lower is better)
Translates to: GRSQLGDVGDDGSRAGHSGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...GCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR CCA 90 bp GTCAAGGTCAGGCAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTC +
Preference number: 2 (lower is better)
Translates to: VKVRQAHVGHGHRGAEQVDPRHL*SASQIV
Trigger: GACAATTTGGCTCGCACTCCACAGATGTCTAGGGTC...GACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTGCCTGACCTTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR CCA 90 bp GCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCAGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 2 (lower is better)
Translates to: AGASSVMSEMMGPELATAGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...TGCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR TCA 90 bp AGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCGTCACAGCCGGGATGTaGACAGCAGATTCTGATCTC +
Preference number: 2 (lower is better)
Translates to: STWAAPPWQTGPGRTRGSVTAGM*TADSDL
Trigger: GAGATCAGAATCTGCTGTTCACATCCCGGCTGTGAC...GCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR GCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 2 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRLTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CCA 90 bp GGTCCAGCAGGAACAGCGGCTGCGCTGTGTAGTGCACCAGCTGCTTCCCTGAATGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTC +
Preference number: 2 (lower is better)
Translates to: GPAGTAAALCSAPAASLNDPRHL*SASQIV
Trigger: GACAATTTGGCTCGCACTCCACAGATGTCTAGGGTC...ATTCAGGGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGCTGGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR TCA 90 bp GAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGTCACAGCCGGGATGTaGACAGCAGATTCTGATCTC +
Preference number: 2 (lower is better)
Translates to: EVLGQHLLGKLALVEHVEVTAGM*TADSDL
Trigger: GAGATCAGAATCTGCTGTTCACATCCCGGCTGTGAC...TTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 2 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRLANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR GCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGCTGGCCATGTTGTTGTaGTTGAAGTACTTGGGCAGC +
Preference number: 2 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRLAMLL*LKYLGS
Trigger: GCTGCCCAAGTACTTCAAGCACAACAACATGGCCAG...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR CCA 72 bp TGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATaGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGC +
Preference number: 3 (lower is better)
Translates to: CPDPSPFVLLGL*RPTHQCPRPRG
Trigger: GCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR-3UTR CAA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGAGACAGTGGGGTCCTaGGCTTTGGGAGGCTCCGAG +
Preference number: 3 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSETVGS*ALGGSE
Trigger: CTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR GCA 72 bp TTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTaGCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGA +
Preference number: 3 (lower is better)
Translates to: FVLLGLWRPTHQ*PRPRGCPASPR
Trigger: TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR GCA 72 bp CTGGCAGGCCAGGGTGACCCTCCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTA +
Preference number: 3 (lower is better)
Translates to: LAGQGDPPDQRC*PDPSPFVLLGL
Trigger: TAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGGGTCACCCTGGCCTGCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR GCA 72 bp AGACTGGCAGGCCAGGGTGACCCTCCTGACCAGAGGTaGTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGG +
Preference number: 3 (lower is better)
Translates to: RLAGQGDPPDQR*CPDPSPFVLLG
Trigger: CCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGGGTCACCCTGGCCTGCCAGTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR CCA 72 bp AGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTaGGGCTATGGCGGCCGACCCACCAGTGCCCAAGAC +
Preference number: 3 (lower is better)
Translates to: RGAAQTRARLSY*GYGGRPTSAQD
Trigger: GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
3UTR CCA 72 bp TCCGGGGCCTCTAGGAGACAGTGGGGTCCTTGGCTTTaGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGG +
Preference number: 3 (lower is better)
Translates to: SGASRRQWGPWL*EAPSLSAGRWW
Trigger: CCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTCCTAGAGGCCCCGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR CCA 72 bp GGGGCAGGGGAAGAGGCGGGCGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTCCAGGCAGGCTACGCT +
Preference number: 3 (lower is better)
Translates to: GAGEEAGDPRHL*SASQIVQAGYA
Trigger: AGCGTAGCCTGCCTGGACAATTTGGCTCGCACTCCACAGATGTCTAGGGTCGCCCGCCTCTTCCCCTGCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR CAA 90 bp CACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAATTCCCTGGCTGGACTaGGCCATGCGGAGAGGAAGA +
Preference number: 3 (lower is better)
Translates to: HGHRGAEQVQQGTGVHAEIPWLD*AMRRGR
Trigger: TCTTCCTCTCCGCATGGCCAAGTCCAGCCAGGGAAT...TTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR CCA 72 bp AGGAGCTGCTCCTGGCCACGCAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTCTCTGGCTTGACCAGG +
Preference number: 3 (lower is better)
Translates to: RSCSWPRRKHGC*NSVSSLSGLTR
Trigger: CCTGGTCAAGCCAGAGAGAGACGACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CAA 90 bp GGTCCAGCAGGAACAGCGGCTGCGCTGTGTAGTGCACCAGCTGCTTCCCTGAATGGGAGACAGGAGCTCTaGGATACTGGCCAGGCTGCT +
Preference number: 3 (lower is better)
Translates to: GPAGTAAALCSAPAASLNGRQEL*DTGQAA
Trigger: AGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCCC...ATTCAGGGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGCTGGACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR-3UTR CAA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTGAGGCTGAGGCAGAATaGCTTGAACCCGGGAGGTGG +
Preference number: 3 (lower is better)
Translates to: VLGQHLLGKLALVEHVEAEAEAE*LEPGRW
Trigger: CCACCTCCCGGGTTCAAGCAATTCTGCCTCAGCCTC...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CAA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 3 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRSSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CAA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTCTGAGGCAGAATTGCTaGAACCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: VLGQHLLGKLALVEHVEALRQNC*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGCAATTCTGCCTCAG...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR CCA 72 bp TGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGGAAGCTGTTCCCGCTC +
Preference number: 3 (lower is better)
Translates to: CLKYLGSTSLAN*PWSNTWKLFPL
Trigger: GAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR CCA 72 bp CGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCA +
Preference number: 3 (lower is better)
Translates to: RGRAPGRTAGYT*AWNVLSHCRSA
Trigger: TGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
3UTR-3UTR CAA 90 bp TTGTTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGCTGAGGCAGAATTGCTaGAACCCGGGAGGTGGAGGT +
Preference number: 3 (lower is better)
Translates to: LLCLKYLGSTSLANWPWSLRQNC*NPGGGG
Trigger: ACCTCCACCTCCCGGGTTCAAGCAATTCTGCCTCAG...CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR GCA 72 bp GTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAGTCCATAGCATCCAAG +
Preference number: 3 (lower is better)
Translates to: VSTLKPWLLSMV*RLSRLESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACAC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
3UTR CCA 72 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTGTTCCCGCTCTGTAGT +
Preference number: 3 (lower is better)
Translates to: KYLGSTSLANWP*SNTWKLFPLCS
Trigger: ACTACAGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
3UTR-3UTR CAA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 3 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCGGGGCCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AADPPVPKTARLPCLPKTGASRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGGCCCC...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCGGGGCCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPGASRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGGCCCC...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDGVHGR*APGTRL
Trigger: GAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACC...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCCTCGGTGTCCGTGTaGCCCCTGGCGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: WRPTHQCPRPRGCPASPRPSVSV*PLASVR
Trigger: CCTCACGGACGCCAGGGGCCACACGGACACCGAGGG...TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCACCCTCGGTGTCCGTGTaGCCCCTGGCGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPPSVSV*PLASVR
Trigger: CCTCACGGACGCCAGGGGCCACACGGACACCGAGGG...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCGCACCGGCAGGTCGTTaGTCCCGGTGTCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: ADPPVPKTARLPCLPKTSAPAGR*SRCPRS
Trigger: GCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGC...GCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp TGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCTCCTGACCAGAGGTaGTGCCCAGACCCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: WGYGGRPTSAQDREAALPPPDQR*CPDPSP
Trigger: CGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGG...AGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPPSAAW*RCPGGS
Trigger: AGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGG...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDPSAAW*RCPGGS
Trigger: AGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGG...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCACTGGTGTCCACGCTaGAGCCGTGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDHWCPR*SRGCSA
Trigger: TGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTG...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCTGCTGGGCATGCTTCTaGCGAAGGCTGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: AADPPVPKTARLPCLPKTCWACF*RRLATS
Trigger: GGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCA...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGGGGCCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRGASRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGGCCCC...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCACACGCACCAGGGGGCTaGTGGATAGGGGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPHAPGG*WIGASR
Trigger: ACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGCGTG...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCACGCACCAGGGGGCTaGTGGATAGGGGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: GRPTSAQDREAALPPQDQHAPGG*WIGASR
Trigger: ACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGCGTG...CTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCACCAAGACCGCGAGGCTaGCCTGCCTCCCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPPRPRG*PASPRP
Trigger: TGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGG...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCCGGCCGACCCACCAGTaGCCAAGACCGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRRPTHQ*PRPRGC
Trigger: GCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCG...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCCGGCCGACCCACCAGTaGCCAAGACCGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAARPTHQ*PRPRGC
Trigger: GCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCG...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCCCCCGGGGCCCAGCATaGCCGCCGCCATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRPRGPA*PPPSCN
Trigger: GTTGCAAGATGGCGGCGGCCATGCTGGGCCCCGGGG...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCCGGGGCCCAGCATaGCCGCCGCCATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVPRGPA*PPPSCN
Trigger: GTTGCAAGATGGCGGCGGCCATGCTGGGCCCCGGGG...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCCCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: AADPPVPKTARLPCLPKTPWSNT*KLFPLG
Trigger: CCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGG...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTGTCCTACTGGGGCTATaGCGGCCGACCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: WGYGGRPTSAQDREAALPVLLGL*RPTHQC
Trigger: GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGAC...AGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCA
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCATGCTGGGCATGCTTCTaGCGAAGGCTGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPCWACF*RRLATS
Trigger: GGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCA...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCACCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGCACCGGCAGGTCGTTaGTCCCGGTGTCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCAPAGR*SRCPRS
Trigger: GCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGC...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCCCTCCTGACCAGAGGTaGTGCCCAGACCCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRPPDQR*CPDPSP
Trigger: CGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGG...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTCCTCCTGACCAGAGGTaGTGCCCAGACCCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSPPDQR*CPDPSP
Trigger: CGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGG...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAPWSNT*KLFPLG
Trigger: CCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGG...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: WRPTHQCPRPRGCPASPRPWSNT*KLFPLG
Trigger: CCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGG...TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCACGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPRVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTGCACCAGGGGGCTGCTaGATAGGGGCCTCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: WGYGGRPTSAQDREAALPAPGGC*IGASRL
Trigger: TAGACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGC...AGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: EPVSREMVGSSAKPSPSEGVHGR*APGTRL
Trigger: GAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACC...CTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp TTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCCCCTCGGTGTCCGTGTaGCCCCTGGCGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: FGRLRACQQGDGGVLGEAPSVSV*PLASVR
Trigger: CCTCACGGACGCCAGGGGCCACACGGACACCGAGGG...GGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAA
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCCCCTCGGTGTCCGTGTaGCCCCTGGCGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTPSVSV*PLASVR
Trigger: CCTCACGGACGCCAGGGGCCACACGGACACCGAGGG...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTCCCTCGGTGTCCGTGTaGCCCCTGGCGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: QAHVGHGHRGAEQVQQGTPSVSV*PLASVR
Trigger: CCTCACGGACGCCAGGGGCCACACGGACACCGAGGG...AGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCTCCACGCTGAAGCCGTaGCTGCTCAGCATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPSTLKP*LLSMVC
Trigger: GCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGA...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCTCAGCAGGGAGATGGTaGGGTCCTCGGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: ADPPVPKTARLPCLPKTSSAGRW*GPRRSR
Trigger: ACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGA...GCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCGCAGGATGGAGTCAATaGGGGCGGTCGGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: ADPPVPKTARLPCLPKTSAGWSQ*GRSGTR
Trigger: TCTTGTCCCCGACCGCCCTCATTGACTCCATCCTGC...GCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPLTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GGGAGGGGGCCGAGTAGGGGCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: GRGPSRGPSRGRAPGRTALTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...GGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGCCCCTACTCGGCCCCCTCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAGCACCGGCAGGTCGTTaGTCCCGGTGTCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: SLSAGRWWGPRRSRPLRRAPAGR*SRCPRS
Trigger: GCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGC...TCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGGCACCGGCAGGTCGTTaGTCCCGGTGTCCACGGAGC +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRAPAGR*SRCPRS
Trigger: GCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGC...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTCCAAGACCGCGAGGCTaGCCTGCCTCCCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSPRPRG*PASPRP
Trigger: TGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGG...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGCGGCCGACCCACCAGTaGCCAAGACCGCGAGGCTGC +
Preference number: 4 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGRPTHQ*PRPRGC
Trigger: GCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCG...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCACCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPAPDQRC*PDPSPF
Trigger: AAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp TGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGAGGATACTGGCCAGGCTaGTGTCAAGGTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: WRPTHQCPRPRGCPASPRGYWPG*CQGQAG
Trigger: GCCTGCCTGACCTTGACAGCAGCCTGGCCAGTATCC...TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGTGGGCAGCACCTCCTTaGCAAACTGGCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: GRPTSAQDREAALPPQDQWAAPP*QTGPGR
Trigger: TCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCA...CTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTGCCACGCAGGAAGCATaGGTGCTGGAACTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: WGYGGRPTSAQDREAALPATQEA*VLELRV
Trigger: GACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGC...AGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGGAGCTGCTGTAGGCTaGGGAGGGGGCCGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREAGAAVG*GGGRVG
Trigger: CCCTACTCGGCCCCCTCCCCAGCCTACAGCAGCTCC...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCCCCTCGGTGTCCGTGTaGCCCCTGGCGTCCGTGAGG +
Preference number: 4 (lower is better)
Translates to: LNRSSRALVSTLKPWLLSPSVSV*PLASVR
Trigger: CCTCACGGACGCCAGGGGCCACACGGACACCGAGGG...GCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACAGCTCATTCCCTGGCTaGACTTGGCCATGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDSSFPG*TWPCGE
Trigger: CTCTCCGCATGGCCAAGTCCAGCCAGGGAATGAGCT...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCACTGAGCTCATTCCCTaGCTGGACTTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPTELIP*LDLAMR
Trigger: CCGCATGGCCAAGTCCAGCCAGGGAATGAGCTCAGT...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGGTCCTACTGGGGCTATaGCGGCCGACCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: EPVSREMVGSSAKPSPSEVLLGL*RPTHQC
Trigger: GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGAC...CTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGTCCTACTGGGGCTATaGCGGCCGACCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRVLLGL*RPTHQC
Trigger: GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGAC...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGCCCGTTTGTCCTACTaGGGCTATGGCGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCARLSY*GYGGRP
Trigger: GGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACGGAGACAGGAGCTCTTaGATACTGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDGDRSS*ILARLL
Trigger: CAGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCC...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR TCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCCCAGGCAGGCTACGCTaGGGCACTTTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAPGRLR*GTFQGW
Trigger: CCACCCCTGAAAAGTGCCTCAGCGTAGCCTGCCTGG...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCACTGGTGTCCACGCTaGAGCCGTGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPHWCPR*SRGCSA
Trigger: TGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTG...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCTTCCCCTTCATCAGCTaGACGTCCGTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPFPFIS*TSVSSL
Trigger: CAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAA...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCTTCTGTTGCTGGGCATaGTTCTGCCGAAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAFCCWA*FCRRLA
Trigger: GGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAA...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCATTCTGTTGCTGGGCATaGTTCTGCCGAAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPFCCWA*FCRRLA
Trigger: GGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAA...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCCCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: GRSQLGDVGDDGSRAGHSPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...GCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGGGGCCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAAGASRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGGCCCC...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCACAGCTGAATCCGGGCTaGTGTTCTCTGCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPAQLNPG*CSLPRE
Trigger: CTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGCTG...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCCCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAPDQRC*PDPSPF
Trigger: AAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVPDQRC*PDPSPF
Trigger: AAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTGGAGGGCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: VQQGTGVHAEAVAAQHGLEGSRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGCCCTC...CAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR GCA 90 bp TCAAGGTCAGGCAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCGAGGGCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: SRSGRLMSGTVTEGLNRSEGSRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGCCCTC...GGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTGCCTGACCTTGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCCCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCGGG +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRPWSNT*KLFPLG
Trigger: CCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGG...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVRVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGGGAGCTGCTGTAGGCTaGGGAGGGGGCCGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: PDQRCCPDPSPFVLLGLWGAAVG*GGGRVG
Trigger: CCCTACTCGGCCCCCTCCCCAGCCTACAGCAGCTCC...CCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGACAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGCACCAGGGGGCTGCTaGATAGGGGCCTCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPAPGGC*IGASRL
Trigger: TAGACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGC...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGAGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGGVHGR*APGTRL
Trigger: GAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACC...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGGVHGR*APGTRL
Trigger: GAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACC...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCTCAGCAGGGAGATGGTaGGGTCCTCGGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAASAGRW*GPRRSR
Trigger: ACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGA...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCAAGACAGTGGGGTCCTTaGCTTTGGGAGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPARQWGP*LWEAPS
Trigger: GCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCCCGTTTGTCCTACTaGGGCTATGGCGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTARLSY*GYGGRP
Trigger: GGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCGGAGCTCTTGGATACTaGCCAGGCTGCTGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: AADPPVPKTARLPCLPKTGALGY*PGCCQG
Trigger: ACCTTGACAGCAGCCTGGCCAGTATCCAAGAGCTCC...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
3UTR CAA 72 bp CTCCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTaGTCCTACTGGGGCTATGGCGGCCGACCCACCAGT +
Preference number: 4 (lower is better)
Translates to: LLTRGAAQTRAR*SYWGYGGRPTS
Trigger: ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: VGSLALGGSEPVSREMVGPSAAW*RCPGGS
Trigger: AGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGG...CCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR TCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDPSAAW*RCPGGS
Trigger: AGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGG...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp TGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACGCAGGATGGAGTCAATaGGGGCGGTCGGGGACAAGA +
Preference number: 4 (lower is better)
Translates to: CCPDPSPFVLLGLWRPTHAGWSQ*GRSGTR
Trigger: TCTTGTCCCCGACCGCCCTCATTGACTCCATCCTGC...GTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCAGGCAGGCTACGCTaGGGCACTTTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRPGRLR*GTFQGW
Trigger: CCACCCCTGAAAAGTGCCTCAGCGTAGCCTGCCTGG...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTCACTGGTGTCCACGCTaGAGCCGTGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREAHWCPR*SRGCSA
Trigger: TGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTG...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCATCCAAGTGGTCACTaGGCTCATTCTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDHPSGH*AHSCPG
Trigger: GCCTGGACAAGAATGAGCTCAGTGACCACTTGGATG...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR TCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCACCAGCTGCTTCCCTaGATCCGGGCTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPHQLLP*IRAAVL
Trigger: GAGAACAGCAGCCCGGATTCAGGGAAGCAGCTGGTG...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR TCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCCACCAGCTGCTTCCCTaGATCCGGGCTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAHQLLP*IRAAVL
Trigger: GAGAACAGCAGCCCGGATTCAGGGAAGCAGCTGGTG...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR GCA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LWRPTHQCPRPRGCPASPGAWSP*TPASPS
Trigger: TGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCC...TGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGTGCTGGGCATGCTTCTaGCGAAGGCTGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPCWACF*RRLATS
Trigger: GGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCA...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCATTCTGTTGCTGGGCATaGTTCTGCCGAAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPAFCCWA*FCRRLA
Trigger: GGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAA...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCCACGCACCAGGGGGCTaGTGGATAGGGGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: VLGFGRLRACQQGDGGVLHAPGG*WIGASR
Trigger: ACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGCGTG...GAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGAC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGTCCCTGAATCCGGGCTaGTGTTCTCTGCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPSLNPG*CSLPRE
Trigger: CTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGGGA...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR GCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCTCCCTGAATCCGGGCTaGTGTTCTCTGCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRSLNPG*CSLPRE
Trigger: CTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGGGA...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR GCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGGGATACTGGCCAGGCTaGTGTCAAGGTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVGYWPG*CQGQAG
Trigger: GCCTGCCTGACCTTGACAGCAGCCTGGCCAGTATCC...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCCCCGGGGCCCAGCATaGCCGCCGCCATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGPRGPA*PPPSCN
Trigger: GTTGCAAGATGGCGGCGGCCATGCTGGGCCCCGGGG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTCGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREARVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGAAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: WRPTHQCPRPRGCPASPRRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGGCCACGCAGGAAGCATaGGTGCTGGAACTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTAATQEA*VLELRV
Trigger: GACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGC...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGCCACGCAGGAAGCATaGGTGCTGGAACTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPATQEA*VLELRV
Trigger: GACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGC...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTASRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTTCATGGCCAGGAGCTTaGAGTCCATGCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: WGYGGRPTSAQDREAALPSWPGA*SPCTPA
Trigger: AGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGA...AGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCACGACTTTCTGTTGCTaGGCATGCTTCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AADPPVPKTARLPCLPKTTTFCC*ACFCRR
Trigger: CCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGT...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCACGACTTTCTGTTGCTaGGCATGCTTCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPTTFCC*ACFCRR
Trigger: CCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGT...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACACGACTTTCTGTTGCTaGGCATGCTTCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDTTFCC*ACFCRR
Trigger: CCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGT...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGAGCTGCTGTAGGCTaGGGAGGGGGCCGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: DSGVLGFGRLRACQQGDGGAAVG*GGGRVG
Trigger: CCCTACTCGGCCCCCTCCCCAGCCTACAGCAGCTCC...ACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GCTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACCAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: AGRSQLGDVGDDGSRAGHQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...GTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGGVHGR*APGTRL
Trigger: GAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACC...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
66% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTTCCACGCTGAAGCCGTaGCTGCTCAGCATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSSTLKP*LLSMVC
Trigger: GCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGA...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACTCCACGCTGAAGCCGTaGCTGCTCAGCATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: CCPDPSPFVLLGLWRPTHSTLKP*LLSMVC
Trigger: GCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGA...GTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGATCAGCAGGGAGATGGTaGGGTCCTCGGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: SLSAGRWWGPRRSRPLRRSAGRW*GPRRSR
Trigger: ACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGA...TCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGTCAGCAGGGAGATGGTaGGGTCCTCGGCGAAGCCGT +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRSAGRW*GPRRSR
Trigger: ACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGA...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGTGGGGTCCTTGGCTTTaGGAGGCTCCGAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTAWGPWL*EAPSLS
Trigger: TGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCA...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTACTGGGGCTATaGCGGCCGACCCACCAGTGC +
Preference number: 4 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGVLLGL*RPTHQC
Trigger: GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGAC...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGCCCGTTTGTCCTACTaGGGCTATGGCGGCCGACCC +
Preference number: 4 (lower is better)
Translates to: VLGFGRLRACQQGDGGVLARLSY*GYGGRP
Trigger: GGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC...GAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR TCA 90 bp CCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCCAGGCAGGCTACGCTaGGGCACTTTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: PDQRCCPDPSPFVLLGLWPGRLR*GTFQGW
Trigger: CCACCCCTGAAAAGTGCCTCAGCGTAGCCTGCCTGG...CCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCCAGGCAGGCTACGCTaGGGCACTTTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QVQQGTGVHAEAVAAQHGPGRLR*GTFQGW
Trigger: CCACCCCTGAAAAGTGCCTCAGCGTAGCCTGCCTGG...ACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp GTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTGCCAGGCAGGCTACGCTaGGGCACTTTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: VQQGTGVHAEAVAAQHGLPGRLR*GTFQGW
Trigger: CCACCCCTGAAAAGTGCCTCAGCGTAGCCTGCCTGG...CAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp GTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCCACTGGTGTCCACGCTaGAGCCGTGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: VLGFGRLRACQQGDGGVLHWCPR*SRGCSA
Trigger: TGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTG...GAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR TCA 90 bp CAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCACTGGTGTCCACGCTaGAGCCGTGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QVQQGTGVHAEAVAAQHGHWCPR*SRGCSA
Trigger: TGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTG...ACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp GGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCATCCAAGTGGTCACTaGGCTCATTCTTGTCCAGGC +
Preference number: 4 (lower is better)
Translates to: GRPTSAQDREAALPPQDQHPSGH*AHSCPG
Trigger: GCCTGGACAAGAATGAGCTCAGTGACCACTTGGATG...CTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR GCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCCTGGCCATGTTGTTGTaGTTGAAGTACTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPLAMLL*LKYLGS
Trigger: GCTGCCCAAGTACTTCAAGCACAACAACATGGCCAG...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCATTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPLTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTARRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCTTCTGTTGCTGGGCATaGTTCTGCCGAAGGCTGGCC +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAFCCWA*FCRRLA
Trigger: GGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAA...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCATGCTCCAGGGAGAACTaGCGGCTATACTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPACSREN*RLYLGM
Trigger: CATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCA...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGCACGCACCAGGGGGCTaGTGGATAGGGGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGHAPGG*WIGASR
Trigger: ACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGCGTG...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGCCAAGACCGCGAGGCTaGCCTGCCTCCCCAAGACCA +
Preference number: 4 (lower is better)
Translates to: RQWGPWLWEAPSLSAGRWPRPRG*PASPRP
Trigger: TGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGG...CCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCCTCCTGACCAGAGGTaGTGCCCAGACCCGAGCCCG +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGPPDQR*CPDPSP
Trigger: CGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGGAGG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGATACTGGCCAGGCTaGTGTCAAGGTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: QAHVGHGHRGAEQVQQGTGYWPG*CQGQAG
Trigger: GCCTGCCTGACCTTGACAGCAGCCTGGCCAGTATCC...AGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGG +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSTSLAN*PWSNTW
Trigger: CCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGT...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCTGGGCAGCACCTCCTTaGCAAACTGGCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTWAAPP*QTGPGR
Trigger: TCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCA...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACCGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: AGRSQLGDVGDDGSRAGHRVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...GTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGACGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGRVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCACGCAGGAAGCATaGGTGCTGGAACTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREAATQEA*VLELRV
Trigger: GACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGC...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCATCATGGCCAGGAGCTTaGAGTCCATGCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPASWPGA*SPCTPA
Trigger: AGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGA...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGCACCAGGGGGCTGCTaGATAGGGGCCTCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: VLGFGRLRACQQGDGGVLAPGGC*IGASRL
Trigger: TAGACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGC...GAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACTGGGGTCCTTGGCTTTaGGAGGCTCCGAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDWGPWL*EAPSLS
Trigger: TGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCA...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGATGGGGTCCTTGGCTTTaGGAGGCTCCGAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRWGPWL*EAPSLS
Trigger: TGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCA...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCTGGGGTCCTTGGCTTTaGGAGGCTCCGAGCCTGTCA +
Preference number: 4 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTWGPWL*EAPSLS
Trigger: TGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCA...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGAGACAGTGGGGTCCTTaGCTTTGGGAGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPRQWGP*LWEAPS
Trigger: GCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAAGACAGTGGGGTCCTTaGCTTTGGGAGGCTCCGAGC +
Preference number: 4 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRRQWGP*LWEAPS
Trigger: GCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGCCTCTAGGAGACAGTaGGGTCCTTGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCASRRQ*GPWLWE
Trigger: CTCCCAAAGCCAAGGACCCCACTGTCTCCTAGAGGC...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAGTAGGAGCCCTCTCCCAGGCCTCTAGGAGACAGTaGGGTCCTTGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: GGVLGEAVPFGEVGALSQASRRQ*GPWLWE
Trigger: CTCCCAAAGCCAAGGACCCCACTGTCTCCTAGAGGC...CTGGGAGAGGGCTCCTACTTCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCCTCTAGGAGACAGTaGGGTCCTTGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAASRRQ*GPWLWE
Trigger: CTCCCAAAGCCAAGGACCCCACTGTCTCCTAGAGGC...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGGAGACAGGAGCTCTTaGATACTGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAGDRSS*ILARLL
Trigger: CAGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCC...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR TCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACACCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATPSAAW*RCPGGS
Trigger: AGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGG...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTAGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGCCAGGCAGGCTACGCTaGGGCACTTTTCAGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGPGRLR*GTFQGW
Trigger: CCACCCCTGAAAAGTGCCTCAGCGTAGCCTGCCTGG...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTGCAGGTTCACTGGTGTCCACGCTaGAGCCGTGGCTGCTCAGCA +
Preference number: 4 (lower is better)
Translates to: QGTGVHAEAVAAQHGLQVHWCPR*SRGCSA
Trigger: TGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTG...AACCTGCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp CTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCCACCAGCTGCTTCCCTaGATCCGGGCTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: LNRSSRALVSTLKPWLLSHQLLP*IRAAVL
Trigger: GAGAACAGCAGCCCGGATTCAGGGAAGCAGCTGGTG...GCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR GCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDLTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAGTAGGAGCCCTCTCCCAGTTCCCCTTCATCAGCTaGACGTCCGTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: GGVLGEAVPFGEVGALSQFPFIS*TSVSSL
Trigger: CAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAA...CTGGGAGAGGGCTCCTACTTCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVGAWSP*TPASPS
Trigger: TGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCC...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPGAWSP*TPASPS
Trigger: TGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCC...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGTGCTGGGCATGCTTCTaGCGAAGGCTGGCCACCTCC +
Preference number: 4 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGCWACF*RRLATS
Trigger: GGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCA...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp TGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGAAGGATCCGGTTTGACTaGACCAGTGAGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: WRPTHQCPRPRGCPASPRRIRFD*TSEIRN
Trigger: GTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT...TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCAGCTGAATCCGGGCTaGTGTTCTCTGCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: PDQRCCPDPSPFVLLGLWQLNPG*CSLPRE
Trigger: CTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGCTG...CCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTGTCCCTGAATCCGGGCTaGTGTTCTCTGCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: VQQGTGVHAEAVAAQHGLSLNPG*CSLPRE
Trigger: CTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGGGA...CAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAACCCCGGGGCCCAGCATaGCCGCCGCCATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: EVLGQHLLGKLALVEHVEPRGPA*PPPSCN
Trigger: GTTGCAAGATGGCGGCGGCCATGCTGGGCCCCGGGG...TTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCCCCGGGGCCCAGCATaGCCGCCGCCATCTTGCAAC +
Preference number: 4 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQIPRGPA*PPPSCN
Trigger: GTTGCAAGATGGCGGCGGCCATGCTGGGCCCCGGGG...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp GGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAGTAGGAGCCCTCTCCCAGTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: GGVLGEAVPFGEVGALSQLANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...CTGGGAGAGGGCTCCTACTTCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRTSLAN*PWSNTW
Trigger: CCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGT...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGG +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREATSLAN*PWSNTW
Trigger: CCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGT...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCGCCACGCAGGAAGCATaGGTGCTGGAACTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: GRSQLGDVGDDGSRAGHSATQEA*VLELRV
Trigger: GACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGC...GCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGATCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp GCTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: AGRSQLGDVGDDGSRAGHSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...GTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCTTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: AADPPVPKTARLPCLPKTLVTLS*RIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAA...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACTCATGGCCAGGAGCTTaGAGTCCATGCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: CCPDPSPFVLLGLWRPTHSWPGA*SPCTPA
Trigger: AGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGA...GTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGCACCAGGGGGCTGCTaGATAGGGGCCTCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: DSGVLGFGRLRACQQGDGAPGGC*IGASRL
Trigger: TAGACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGC...ACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp TTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCAGCTCATTCCCTGGCTaGACTTGGCCATGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: FGRLRACQQGDGGVLGEASSFPG*TWPCGE
Trigger: CTCTCCGCATGGCCAAGTCCAGCCAGGGAATGAGCT...GGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GGAAGAGGGGCAGGGGAAGAGGCGGGCGACCCTAGACATCTGTGGAGTGCGAGCACTGAGCTCATTCCCTaGCTGGACTTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: GRGAGEEAGDPRHLWSASTELIP*LDLAMR
Trigger: CCGCATGGCCAAGTCCAGCCAGGGAATGAGCTCAGT...GCTCGCACTCCACAGATGTCTAGGGTCGCCCGCCTCTTCCCCTGCCCCTCTTCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACTCCATAGCATCCAAGTaGTCACTGAGCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: GGRPTSAQDREAALPPQDSIASK*SLSSFP
Trigger: AGGGAATGAGCTCAGTGACCACTTGGATGCTATGGA...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp TCAAGGTCAGGCAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCTCCACGCTGAAGCCGTaGCTGCTCAGCATGGTCTGC +
Preference number: 4 (lower is better)
Translates to: SRSGRLMSGTVTEGLNRSSTLKP*LLSMVC
Trigger: GCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGA...GGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTGCCTGACCTTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACGGAGACAGGAGCTCTTaGATGTCCAGCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDGDRSS*MSSRAL
Trigger: CAGTGCCCTGCTGGACATCCAAGAGCTCCTGTCTCC...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGCCTCTAGGAGACAGTaGGGTCCTTGGCTTTGGGAG +
Preference number: 4 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRASRRQ*GPWLWE
Trigger: CTCCCAAAGCCAAGGACCCCACTGTCTCCTAGAGGC...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGGAGCTCTTGGATACTaGCCAGGCTGCTGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSGALGY*PGCCQG
Trigger: ACCTTGACAGCAGCCTGGCCAGTATCCAAGAGCTCC...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR TCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREAGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDGAWSP*TPASPS
Trigger: TGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCC...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGTGCTCCAGGGAGAACTaGCGGCTATACTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRCSREN*RLYLGM
Trigger: CATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCA...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTALLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCCTGACCAGAGGTGCTaGCCAGACCCGAGCCCGTTT +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGPDQRC*PDPSPF
Trigger: AAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPLANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREALANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDLANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGG +
Preference number: 4 (lower is better)
Translates to: VLGFGRLRACQQGDGGVLTSLAN*PWSNTW
Trigger: CCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGT...GAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GAGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGTGGGCAGCACCTCCTTaGCAAACTGGCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: ETVGSLALGGSEPVSREMWAAPP*QTGPGR
Trigger: TCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCA...CATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGTGGGCAGCACCTCCTTaGCAAACTGGCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGWAAPP*QTGPGR
Trigger: TCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCA...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGCGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWRVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: VGSLALGGSEPVSREMVGRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...CCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCTTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PTHQCPRPRGCPASPRPALVTLS*RIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAA...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PRPEPVCPTGAMAADPPVTAGYT*AWNVLS
Trigger: GCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGT...CACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: PVCPTGAMAADPPVPKTATAGYT*AWNVLS
Trigger: GCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGT...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPTAGYT*AWNVLS
Trigger: GCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGT...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp ACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGAGCTCATTCCCTGGCTaGACTTGGCCATGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: TVTEGLNRSSRALVSTLKSSFPG*TWPCGE
Trigger: CTCTCCGCATGGCCAAGTCCAGCCAGGGAATGAGCT...CTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GCAGGAACAGCGGCTGCGCTGTGTAGTGCACCAGCTGCTTCCCTGAATCCGGGCACTGAGCTCATTCCCTaGCTGGACTTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: AGTAAALCSAPAASLNPGTELIP*LDLAMR
Trigger: CCGCATGGCCAAGTCCAGCCAGGGAATGAGCTCAGT...GCCCGGATTCAGGGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCATCTGTGTATCTCTGTaGAGCGGGGAACGGGACAGT +
Preference number: 4 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRICVSL*SGERDS
Trigger: ACTGTCCCGTTCCCCGCTCCACAGAGATACACAGAT...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCTCCATAGCATCCAAGTaGTCACTGAGCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: AMAADPPVPKTARLPCLPSIASK*SLSSFL
Trigger: CAAGAATGAGCTCAGTGACCACTTGGATGCTATGGA...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR CCA 90 bp CAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGAGCTCTTGGATACTaGCCAGGCTGCTGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: QAHVGHGHRGAEQVQQGTGALGY*PGCCQG
Trigger: ACCTTGACAGCAGCCTGGCCAGTATCCAAGAGCTCC...AGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp CAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTGGAGACAGGAGCTCTTaGATACTGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: QVQQGTGVHAEAVAAQHGGDRSS*ILARLL
Trigger: CAGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCC...ACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp ACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGGGAGACAGGAGCTCTTaGATACTGGCCAGGCTGCTG +
Preference number: 4 (lower is better)
Translates to: TVTEGLNRSSRALVSTLKGDRSS*ILARLL
Trigger: CAGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCC...CTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCATGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPAWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCAGTGAGATCAGGAACTaGATGAGCTTGTTGACGACT +
Preference number: 4 (lower is better)
Translates to: ADPPVPKTARLPCLPKTSSEIRN*MSLLTT
Trigger: AGTCGTCAACAAGCTCATTCAGTTCCTGATCTCACT...GCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp AGTAGGGGCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTTGGGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: SRGPSRGRAPGRTAGYTWGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...CCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGCCCCTACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp GCGGGCGACCCTAGACATCTGTGGAGTGCGAGCCAAATTGTCCAGGCAGGCTACCACCAGCTGCTTCCCTaGATCCGGGCTGCTGTTCTC +
Preference number: 4 (lower is better)
Translates to: AGDPRHLWSASQIVQAGYHQLLP*IRAAVL
Trigger: GAGAACAGCAGCCCGGATTCAGGGAAGCAGCTGGTG...GTAGCCTGCCTGGACAATTTGGCTCGCACTCCACAGATGTCTAGGGTCGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp AGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCAGGTGGAGGTCGCAGTaGGCCGAGATCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: STWAAPPWQTGPGRTRGSRWRSQ*AEIAPL
Trigger: CAGTGGTGCGATCTCGGCTCACTGCGACCTCCACCT...GCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCTGGCCATGTTGTTGTaGTTGAAGTACTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPLAMLL*LKYLGS
Trigger: GCTGCCCAAGTACTTCAAGCACAACAACATGGCCAG...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAALTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp AGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RQWGPWLWEAPSLSAGRWRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...CCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: ARAVDVLQGELPAILGHGMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...TCCATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTAGAGCCTCATTCTCATaGTTCATGGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSRASFS*FMARSL
Trigger: CAAGCTCCTGGCCATGAAGCATGAGAATGAGGCTCT...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCTTGACGACTTTCTGTTaGTGGGCATGCTTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCLTTFC*WACFCR
Trigger: TCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAA...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCAGGATCCGGTTTGACTaGACCAGTGAGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAARIRFD*TSEIRN
Trigger: GTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGATGCTCCAGGGAGAACTaGCGGCTATACTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGCSREN*RLYLGM
Trigger: CATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCA...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp AACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCGGGGCCTCTCGTCTATaGTCCCGCCGGGGGAGGCCA +
Preference number: 4 (lower is better)
Translates to: NCRLYLGMECAEPLSFSIGASRL*SRRGRP
Trigger: TGGCCTCCCCCGGCGGGAGCATAGACGAGAGGCCCC...GATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: GHRGAEQVQQGTGVHAEALLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...GGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR GCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRLLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GGGAAGAGGCGGGCGACCCTAGACATCTGTGGAGTGCGAGCCAAATTGTCCAGGTCCCTGAATCCGGGCTaGTGTTCTCTGCCTCGGGAG +
Preference number: 4 (lower is better)
Translates to: GKRRATLDICGVRAKLSRSLNPG*CSLPRE
Trigger: CTCCCGAGGCAGAGAACAGCAGCCCGGATTCAGGGA...CCTGGACAATTTGGCTCGCACTCCACAGATGTCTAGGGTCGCCCGCCTCTTCCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR GCA 90 bp GCGGGCGACCCTAGACATCTGTGGAGTGCGAGCCAAATTGTCCAGGCAGGCTACGGATACTGGCCAGGCTaGTGTCAAGGTCAGGCAGGC +
Preference number: 4 (lower is better)
Translates to: AGDPRHLWSASQIVQAGYGYWPG*CQGQAG
Trigger: GCCTGCCTGACCTTGACAGCAGCCTGGCCAGTATCC...GTAGCCTGCCTGGACAATTTGGCTCGCACTCCACAGATGTCTAGGGTCGCCCGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTCGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: VLGQHLLGKLALVEHVEARVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp CAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAGTAGGAAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: QQGDGGVLGEAVPFGEVGRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...TCCTACTTCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCACTTCACTCTTCAGGGTaGACACACTGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPLHSSG*THWSLS
Trigger: GGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGAAG...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCATTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PPVPKTARLPCLPKTSPALVTLS*RIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAA...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTTAGYT*AWNVLS
Trigger: GCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGT...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGGGAGCTGCTGTAGGCTaGGGAGGGGGCCGAGTAGGG +
Preference number: 4 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRGAAVG*GGGRVG
Trigger: CCCTACTCGGCCCCCTCCCCAGCCTACAGCAGCTCC...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGACTGAGCTCATTCCCTaGCTGGACTTGGCCATGCGG +
Preference number: 4 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGTELIP*LDLAMR
Trigger: CCGCATGGCCAAGTCCAGCCAGGGAATGAGCTCAGT...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTATCTGTGTATCTCTGTaGAGCGGGGAACGGGACAGT +
Preference number: 4 (lower is better)
Translates to: LSYWGYGGRPTSAQDREAICVSL*SGERDS
Trigger: ACTGTCCCGTTCCCCGCTCCACAGAGATACACAGAT...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGTCCATAGCATCCAAGTaGTCACTGAGCTCATTCTTG +
Preference number: 4 (lower is better)
Translates to: GRPTSAQDREAALPPQDQSIASK*SLSSFL
Trigger: CAAGAATGAGCTCAGTGACCACTTGGATGCTATGGA...CTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR TCA 90 bp AGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGACCATGTTGTTGTGCTTaGAGTACTTGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: SLSAGRWWGPRRSRPLRRPCCCA*STWAAP
Trigger: AGGTGCTGCCCAAGTACTTCAAGCACAACAACATGG...TCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR TCA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGACCATGTTGTTGTGCTTaGAGTACTTGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRPCCCA*STWAAP
Trigger: AGGTGCTGCCCAAGTACTTCAAGCACAACAACATGG...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCATGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: LPRPEPVCPTGAMAADPPWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...TGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWLTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGTTCCCCTTCATCAGCTaGACGTCCGTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGFPFIS*TSVSSL
Trigger: CAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAA...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GAGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGTTCCCCTTCATCAGCTaGACGTCCGTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: ETVGSLALGGSEPVSREMFPFIS*TSVSSL
Trigger: CAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAA...CATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTTTCCCCTTCATCAGCTaGACGTCCGTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAAFPFIS*TSVSSL
Trigger: CAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAA...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATGAWSP*TPASPS
Trigger: TGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCC...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACAGAGCCTCATTCTCATaGTTCATGGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDRASFS*FMARSL
Trigger: CAAGCTCCTGGCCATGAAGCATGAGAATGAGGCTCT...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGAGGATCCGGTTTGACTaGACCAGTGAGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPRIRFD*TSEIRN
Trigger: GTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp GTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGAGGATCCGGTTTGACTaGACCAGTGAGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: VGSLALGGSEPVSREMVGRIRFD*TSEIRN
Trigger: GTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT...CCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GAGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGTGCTCCAGGGAGAACTaGCGGCTATACTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: ETVGSLALGGSEPVSREMCSREN*RLYLGM
Trigger: CATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCA...CATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp AGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCACCCGAGCCGTGGACGTaGTCCAGGGAGAACTGCCGG +
Preference number: 4 (lower is better)
Translates to: RTAGYTWAWNVLSHCRSAPEPWT*SRENCR
Trigger: CCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGG...TGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp ATCAGGGGGATCTTTCTCTTCACCCCCAGGATCCGGTTTGACTGCACCAGTGAGCACGCACCAGGGGGCTaGTGGATAGGGGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: IRGIFLFTPRIRFDCTSEHAPGG*WIGASR
Trigger: ACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGCGTG...CTCACTGGTGCAGTCAAACCGGATCCTGGGGGTGAAGAGAAAGATCCCCCTGAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGLLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp CACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAACTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: HGHRGAEQVQQGTGVHAELLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...TTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTTGGGCAGCACCTCCTTaGCAAACTGGCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: VLGQHLLGKLALVEHVEAWAAPP*QTGPGR
Trigger: TCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCA...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCGTGTCGTCTCTCTCTaGCTTGACCAGGCCGCCCTG +
Preference number: 4 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKRVVSL*LDQAAL
Trigger: CAGGGCGGCCTGGTCAAGCCAGAGAGAGACGACACG...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCTTCACTCTTCAGGGTaGACACACTGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRLHSSG*THWSLS
Trigger: GGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGAAG...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: GRSQLGDVGDDGSRAGHSTAGYT*AWNVLS
Trigger: GCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGT...GCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCCAGGGGCGTAGAGGCTaGAGCTGCTGTAGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: RENCRLYLGMECAEPLSFQGRRG*SCCRLG
Trigger: CCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTG...GAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCAGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTC +
Preference number: 4 (lower is better)
Translates to: RTAGYTWAWNVLSHCRSAGVHGR*APGTRL
Trigger: GAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACC...TGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPDPRHL*SASQIV
Trigger: GACAATTTGGCTCGCACTCCACAGATGTCTAGGGTC...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCTCCATAGCATCCAAGTaGTCACTGAGCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCSIASK*SLSSFP
Trigger: AGGGAATGAGCTCAGTGACCACTTGGATGCTATGGA...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGAGACAGGAGCTCTTaGATGTCCAGCAGGGCACTG +
Preference number: 4 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWGDRSS*MSSRAL
Trigger: CAGTGCCCTGCTGGACATCCAAGAGCTCCTGTCTCC...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
3UTR CAA 72 bp CCGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGC +
Preference number: 4 (lower is better)
Translates to: PWTCSRENCRLY*GMECAEPLSFS
Trigger: GCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp CCTGACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCCATGTTGTTGTGCTTaGAGTACTTGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: PDQRCCPDPSPFVLLGLWPCCCA*STWAAP
Trigger: AGGTGCTGCCCAAGTACTTCAAGCACAACAACATGG...CCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: VGSLALGGSEPVSREMVGWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...CCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR TCA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGTGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCT +
Preference number: 4 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRPSAAW*RCPGGS
Trigger: AGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGG...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCAGTGAGATCAGGAACTaGATGAGCTTGTTGACGACT +
Preference number: 4 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCSEIRN*MSLLTT
Trigger: AGTCGTCAACAAGCTCATTCAGTTCCTGATCTCACT...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp GGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCAGATCAGGAACTGAATaGGTGCTTCATGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: GRSQLGDVGDDGSRAGHSRSGTE*VLHGQE
Trigger: CTCCTGGCCATGAAGCACTCATTCAGTTCCTGATCT...GCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTTTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: VLGQHLLGKLALVEHVEALTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGAGAGCCTCATTCTCATaGTTCATGGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGRASFS*FMARSL
Trigger: CAAGCTCCTGGCCATGAAGCATGAGAATGAGGCTCT...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp CAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGTTGACGACTTTCTGTTaGTGGGCATGCTTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QWGPWLWEAPSLSAGRWWLTTFC*WACFCR
Trigger: TCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAA...CCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GCTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGGATCCGGTTTGACTaGACCAGTGAGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: AGRSQLGDVGDDGSRAGHRIRFD*TSEIRN
Trigger: GTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT...GTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp AACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCCACGCACCAGGGGGCTaGTGGATAGGGGCCTCTCGT +
Preference number: 4 (lower is better)
Translates to: NCRLYLGMECAEPLSFSIHAPGG*WIGASR
Trigger: ACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGCGTG...GATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTTGTAAACAAGCCTGCTaGCAGGCAACGGGCTCCAGC +
Preference number: 4 (lower is better)
Translates to: VLGQHLLGKLALVEHVEACKQAC*QATGSS
Trigger: GCTGGAGCCCGTTGCCTGGCAGCAGGCTTGTTTACA...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCCCATGTAAACAAGCCTaGTGCCAGGCAACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: STWAAPPWQTGPGRTRGSPCKQA*CQATGS
Trigger: GGAGCCCGTTGCCTGGCAGCAGGCTTGTTTACATGG...GCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AGTAGGGGCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTTGGCAGGAACTGAATGAGTaGTTCATGGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SRGPSRGRAPGRTAGYTWQELNE*FMARSL
Trigger: CAAGCTCCTGGCCATGAAGCACTCATTCAGTTCCTG...CCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGCCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp GAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAATGGGCAGCACCTCCTTaGCAAACTGGCCCTGGTCGA +
Preference number: 4 (lower is better)
Translates to: EVLGQHLLGKLALVEHVEWAAPP*QTGPGR
Trigger: TCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCA...TTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTGCCACGCAGGAAGCATaGGTGCTGGAACTCCGTGTC +
Preference number: 4 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQIATQEA*VLELRV
Trigger: GACACGGAGTTCCAGCACCCATGCTTCCTGCGTGGC...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp GTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCCTTCACTCTTCAGGGTaGACACACTGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: VLGFGRLRACQQGDGGVLLHSSG*THWSLS
Trigger: GGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGAAG...GAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp AGTAGGGGCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTTGGCTTCACTCTTCAGGGTaGACACACTGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: SRGPSRGRAPGRTAGYTWLHSSG*THWSLS
Trigger: GGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGAAG...CCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGCCCCTACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACTTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDLVTLS*RIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAA...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp GCTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: AGRSQLGDVGDDGSRAGHGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...GTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAACTGCCGGCTATACTTaGGCATGGAATGTGCTGAGC +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATTAGYT*AWNVLS
Trigger: GCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGT...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp ATCAGGGGGATCTTTCTCTTCACCCCCAGGATCCGGTTTGACTGCACCAGTGAGGCACCAGGGGGCTGCTaGATAGGGGCCTCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: IRGIFLFTPRIRFDCTSEAPGGC*IGASRL
Trigger: TAGACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGC...CTCACTGGTGCAGTCAAACCGGATCCTGGGGGTGAAGAGAAAGATCCCCCTGAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp CTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: LNRSSRALVSTLKPWLLSDPRHL*SASQIV
Trigger: GACAATTTGGCTCGCACTCCACAGATGTCTAGGGTC...GCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp CAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: QWGPWLWEAPSLSAGRWWDPRHL*SASQIV
Trigger: GACAATTTGGCTCGCACTCCACAGATGTCTAGGGTC...CCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp CACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGACCCTAGACATCTGTaGAGTGCGAGCCAAATTGTC +
Preference number: 4 (lower is better)
Translates to: HGHRGAEQVQQGTGVHAEDPRHL*SASQIV
Trigger: GACAATTTGGCTCGCACTCCACAGATGTCTAGGGTC...TTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGATCTGTGTATCTCTGTaGAGCGGGGAACGGGACAGT +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGICVSL*SGERDS
Trigger: ACTGTCCCGTTCCCCGCTCCACAGAGATACACAGAT...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAAGATCAGGAACTGAATaGGTGCTTCATGGCCAGGAG +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATRSGTE*VLHGQE
Trigger: CTCCTGGCCATGAAGCACTCATTCAGTTCCTGATCT...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp GACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTCTGGCCATGTTGTTGTaGTTGAAGTACTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: DSGVLGFGRLRACQQGDGLAMLL*LKYLGS
Trigger: GCTGCCCAAGTACTTCAAGCACAACAACATGGCCAG...ACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR GCA 90 bp GAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAATTGACCAGGCCGCCCTaGTCGATGTGGACCACTTTC +
Preference number: 4 (lower is better)
Translates to: EVLGQHLLGKLALVEHVELTRPP*SMWTTF
Trigger: GAAAGTGGTCCACATCGAGCAGGGCGGCCTGGTCAA...TTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGAGAGCCTCATTCTCATaGTTCATGGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGRASFS*FMARSL
Trigger: CAAGCTCCTGGCCATGAAGCATGAGAATGAGGCTCT...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGTTGACGACTTTCTGTTaGTGGGCATGCTTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGLTTFC*WACFCR
Trigger: TCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAA...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGTTGACGACTTTCTGTTaGTGGGCATGCTTCTGCCGA +
Preference number: 4 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGLTTFC*WACFCR
Trigger: TCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAA...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCTGCTCAGCATGGTCTaGAGGTTATCCAGGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGLLSMV*RLSRLE
Trigger: CTCCAACCTGGATAACCTGCAGACCATGCTGAGCAG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR GCA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCCCGAGATCGCACCACTaGACTCCAACCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFPRSHH*TPTWVT
Trigger: TGTCACCCAGGTTGGAGTGCAGTGGTGCGATCTCGG...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTCAGGAACTGAATGAGTaGTTCATGGCCAGGAGCTTG +
Preference number: 4 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAAQELNE*FMARSL
Trigger: CAAGCTCCTGGCCATGAAGCACTCATTCAGTTCCTG...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGG +
Preference number: 4 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKTSLAN*PWSNTW
Trigger: CCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGT...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp TTGTTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGTCAAGGAGCTGCTCCTaGCCACGCAGGAAGCATGGG +
Preference number: 4 (lower is better)
Translates to: LLCLKYLGSTSLANWPWSSRSCS*PRRKHG
Trigger: CCCATGCTTCCTGCGTGGCCAGGAGCAGCTCCTTGA...CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTACGACTTTCTGTTGCTaGGCATGCTTCTGCCGAAGG +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGTTFCC*ACFCRR
Trigger: CCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGT...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
58% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp GACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: DSGVLGFGRLRACQQGDGGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...ACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CCA 90 bp AGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCAGCACCAGGGGGCTGCTaGATAGGGGCCTCTCGTCTA +
Preference number: 4 (lower is better)
Translates to: RTAGYTWAWNVLSHCRSAAPGGC*IGASRL
Trigger: TAGACGAGAGGCCCCTATCCAGCAGCCCCCTGGTGC...TGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGATCTGTGTATCTCTGTaGAGCGGGGAACGGGACAGT +
Preference number: 4 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWICVSL*SGERDS
Trigger: ACTGTCCCGTTCCCCGCTCCACAGAGATACACAGAT...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCCCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFPWSNT*KLFPLC
Trigger: ACAGAGCGGGAACAGCTTCCACGTGTTCGACCAGGG...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCTGT +
Preference number: 4 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQIPWSNT*KLFPLC
Trigger: ACAGAGCGGGAACAGCTTCCACGTGTTCGACCAGGG...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR TCA 90 bp GATGATGGGTCCAGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTTGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: DDGSRAGHSIRGVEAGAAWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...AGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCTGGACCCATCATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp GCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAGCAAGTGAGATCAGGAACTaGATGAGTGCTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: AGASSVMSEMMGPELATASEIRN*MSASWP
Trigger: TGGCCATGAAGCACTCATTCAGTTCCTGATCTCACT...TGCTGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp CTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACAAGTGAGATCAGGAACTaGATGAGTGCTTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: LAGASSVMSEMMGPELATSEIRN*MSASWP
Trigger: TGGCCATGAAGCACTCATTCAGTTCCTGATCTCACT...TGTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCCGCAGGAAGCATGGGTaGTGGAACTCCGTGTCGTCT +
Preference number: 4 (lower is better)
Translates to: RENCRLYLGMECAEPLSFRRKHG*WNSVSS
Trigger: AGACGACACGGAGTTCCAGCACCCATGCTTCCTGCG...GAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTATGTTCTCAAGGAGCTaGTCCTGGCCACGCAGGAAG +
Preference number: 4 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQIMFSRS*SWPRRK
Trigger: CTTCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACAT...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGCCATGTAAACAAGCCTaGTGCCAGGCAACGGGCTCC +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRPCKQA*CQATGS
Trigger: GGAGCCCGTTGCCTGGCAGCAGGCTTGTTTACATGG...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGGGAGCTGTCCGGTCTTaGAGGGTCGGACCATGTAAA +
Preference number: 4 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKGAVRS*RVGPCK
Trigger: TTTACATGGTCCGACCCTGCAAGACCGGACAGCTCC...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp TTGTTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGCCGAGATCGCACCACTaGACTCCAACCTGGGTGACA +
Preference number: 4 (lower is better)
Translates to: LLCLKYLGSTSLANWPWSPRSHH*TPTWVT
Trigger: TGTCACCCAGGTTGGAGTGCAGTGGTGCGATCTCGG...CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFLANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGG +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRTSLAN*PWSNTW
Trigger: CCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGT...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTCTTCACTCTTCAGGGTaGACACACTGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGLHSSG*THWSLS
Trigger: GGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGAAG...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTGGCTATACTTGGGCATaGAATGTGCTGAGCCACTGT +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGGYTWA*NVLSHC
Trigger: ACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCC...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CCA 90 bp CAGGGCACTGGTGTCCACGCTGAAGCCGTGGCTGCTCAGCATGGTCTGCAGGTTTCCATAGCATCCAAGTaGTCACTGAGCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: QGTGVHAEAVAAQHGLQVSIASK*SLSSFP
Trigger: AGGGAATGAGCTCAGTGACCACTTGGATGCTATGGA...AACCTGCAGACCATGCTGAGCAGCCACGGCTTCAGCGTGGACACCAGTGCCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR TCA 90 bp AGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCCCATGTTGTTGTGCTTaGAGTACTTGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: STWAAPPWQTGPGRTRGSPCCCA*STWAAP
Trigger: AGGTGCTGCCCAAGTACTTCAAGCACAACAACATGG...GCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR TCA 90 bp AGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCGGGCATGGAATGTGCTaGGCCACTGTCGTTCAGCAT +
Preference number: 4 (lower is better)
Translates to: RENCRLYLGMECAEPLSFGHGMC*ATVVQH
Trigger: ATGCTGAACGACAGTGGCTCAGCACATTCCATGCCC...GAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCGTCACAGCCGGGATGTaGACAGCAGATTCTGATCTC +
Preference number: 4 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFVTAGM*TADSDL
Trigger: GAGATCAGAATCTGCTGTTCACATCCCGGCTGTGAC...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGTTCCCCTTCATCAGCTaGACGTCCGTCAGCAGCTTG +
Preference number: 4 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRFPFIS*TSVSSL
Trigger: CAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAA...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp TTGTTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGGGAGCTGTCCGGTCTTaGAGGGTCGGACCATGTAAA +
Preference number: 4 (lower is better)
Translates to: LLCLKYLGSTSLANWPWSGAVRS*RVGPCK
Trigger: TTTACATGGTCCGACCCTGCAAGACCGGACAGCTCC...CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp TTGTTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTG +
Preference number: 4 (lower is better)
Translates to: LLCLKYLGSTSLANWPWSLANWP*SNTWKL
Trigger: CAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAA...CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: RENCRLYLGMECAEPLSFRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...GAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp ATCAGGGGGATCTTTCTCTTCACCCCCAGGATCCGGTTTGACTGCACCAGTGAGTCATGGCCAGGAGCTTaGAGTCCATGCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: IRGIFLFTPRIRFDCTSESWPGA*SPCTPA
Trigger: AGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGA...CTCACTGGTGCAGTCAAACCGGATCCTGGGGGTGAAGAGAAAGATCCCCCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCTCATGGCCAGGAGCTTaGAGTCCATGCACTCCTGCT +
Preference number: 4 (lower is better)
Translates to: RENCRLYLGMECAEPLSFSWPGA*SPCTPA
Trigger: AGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGA...GAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp GAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAACCATGTTGTTGTGCTTaGAGTACTTGGGCAGCACCT +
Preference number: 4 (lower is better)
Translates to: EVLGQHLLGKLALVEHVEPCCCA*STWAAP
Trigger: AGGTGCTGCCCAAGTACTTCAAGCACAACAACATGG...TTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR TCA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTAGTGAGATCAGGAACTaGATGAGCTTGTTGACGACT +
Preference number: 4 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGSEIRN*MSLLTT
Trigger: AGTCGTCAACAAGCTCATTCAGTTCCTGATCTCACT...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR TCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGGTCACAGCCGGGATGTaGACAGCAGATTCTGATCTC +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRVTAGM*TADSDL
Trigger: GAGATCAGAATCTGCTGTTCACATCCCGGCTGTGAC...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp GAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAACTGGCCATGTTGTTGTaGTTGAAGTACTTGGGCAGC +
Preference number: 4 (lower is better)
Translates to: EVLGQHLLGKLALVEHVELAMLL*LKYLGS
Trigger: GCTGCCCAAGTACTTCAAGCACAACAACATGGCCAG...TTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCA +
Preference number: 4 (lower is better)
Translates to: NCRLYLGMECAEPLSFSIGAWSP*TPASPS
Trigger: TGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCC...GATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp AGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATGCTCCAGGGAGAACTaGCGGCTATACTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: RTAGYTWAWNVLSHCRSACSREN*RLYLGM
Trigger: CATGCCCAAGTATAGCCGGCAGTTCTCCCTGGAGCA...TGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp AACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGAAGCATGGGTGCTaGAACTCCGTGTCGTCTCTC +
Preference number: 4 (lower is better)
Translates to: NCRLYLGMECAEPLSFSIRKHGC*NSVSSL
Trigger: GAGAGACGACACGGAGTTCCAGCACCCATGCTTCCT...GATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp CATGGTCTGCAGGTTATCCAGGTTGGAGTCCATAGCATCCAAGTGGTCACTGAGAGCTCATTCCCTGGCTaGACTTGGCCATGCGGAGAG +
Preference number: 4 (lower is better)
Translates to: HGLQVIQVGVHSIQVVTESSFPG*TWPCGE
Trigger: CTCTCCGCATGGCCAAGTCCAGCCAGGGAATGAGCT...CTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGATAACCTGCAGACCATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CCA 90 bp ATCCAGGTTGGAGTCCATAGCATCCAAGTGGTCACTGAGCTCATTCCCTGGCTGGGAGCTCTTGGATACTaGCCAGGCTGCTGTCAAGGT +
Preference number: 4 (lower is better)
Translates to: IQVGVHSIQVVTELIPWLGALGY*PGCCQG
Trigger: ACCTTGACAGCAGCCTGGCCAGTATCCAAGAGCTCC...CAGCCAGGGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR GCA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTTCACTGATTTACTTCTaGAAACCGGAGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQISLIYF*KPELSG
Trigger: ACCGGACAGCTCCGGTTTGCAGAAGTAAATCAGTGA...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGGGAGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCCTTCACTCTTCAGGGTaGACACACTGGTCACTTTCC +
Preference number: 4 (lower is better)
Translates to: RENCRLYLGMECAEPLSFLHSSG*THWSLS
Trigger: GGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGAAG...GAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCTCCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGTGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR TCA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGTGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCT +
Preference number: 4 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRWSLSS*CSQGAA
Trigger: AGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCA...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGGTGAACAGCAGATTCTaGTCTCCAACTCCAGACAAT +
Preference number: 4 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKVNSRF*SPTPDN
Trigger: ATTGTCTGGAGTTGGAGATCAGAATCTGCTGTTCAC...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR GCA 90 bp AACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGATCCGGTTTGACTaGACCAGTGAGATCAGGAAC +
Preference number: 4 (lower is better)
Translates to: NCRLYLGMECAEPLSFSIRIRFD*TSEIRN
Trigger: GTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT...GATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR GCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGTCACTGATTTACTTCTaGAAACCGGAGCTGTCCGGT +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRSLIYF*KPELSG
Trigger: ACCGGACAGCTCCGGTTTGCAGAAGTAAATCAGTGA...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGTTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRLVTLS*RIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAA...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR TCA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGGTGAACAGCAGATTCTaGTCTCCAACTCCAGACAAT +
Preference number: 4 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRVNSRF*SPTPDN
Trigger: ATTGTCTGGAGTTGGAGATCAGAATCTGCTGTTCAC...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CCA 90 bp AGAACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCA +
Preference number: 4 (lower is better)
Translates to: RTAGYTWAWNVLSHCRSALVTLS*RIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAA...TGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CCA 90 bp ATCCAGGTTGGAGTCCATAGCATCCAAGTGGTCACTGAGCTCATTCCCTGGCTGTCCATAGCATCCAAGTaGTCACTGAGCTCATTCCCT +
Preference number: 4 (lower is better)
Translates to: IQVGVHSIQVVTELIPWLSIASK*SLSSFP
Trigger: AGGGAATGAGCTCAGTGACCACTTGGATGCTATGGA...CAGCCAGGGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS GCA 90 bp CGCCACAGAGGGGTCTCGGCTGCTGCCGCCCAGGCCCGACGCTCATaGCCGGCCAGGCTGGGTCTGGTCCACGGCTGTGTGGGAGGGCCC +
Preference number: 5 (lower is better)
Translates to: RHRGVSAAAAQARRS*PARLGLVHGCVGGP
Trigger: GGGCCCTCCCACACAGCCGTGGACCAGACCCAGCCTGGCCGGGCATGAGCGTCGGGCCTGGGCGGCAGCAGCCGAGACCCCTCTGTGGCG
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS CCA 90 bp CTGCTGCCGCCCAGGCCCGACGCTCATGCCCGGCCAGGCTGGGTCTaGTCCACGGCTGTGTGGGAGGGCCCGAGCGCTGGCAGAGCCCTC +
Preference number: 5 (lower is better)
Translates to: LLPPRPDAHARPGWV*STAVWEGPSAGRAL
Trigger: GAGGGCTCTGCCAGCGCTCGGGCCCTCCCACACAGCCGTGGACCAGACCCAGCCTGGCCGGGCATGAGCGTCGGGCCTGGGCGGCAGCAG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS CCA 90 bp CCCGACGCTCATGCCCGGCCAGGCTGGGTCTGGTCCACGGCTGTGTaGGAGGGCCCGAGCGCTGGCAGAGCCCTCCTCCCTCCCCAGTGG +
Preference number: 5 (lower is better)
Translates to: PDAHARPGWVWSTAV*EGPSAGRALLPPQW
Trigger: CCACTGGGGAGGGAGGAGGGCTCTGCCAGCGCTCGGGCCCTCCCACACAGCCGTGGACCAGACCCAGCCTGGCCGGGCATGAGCGTCGGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS GCA 90 bp GGGAGCCATGACGACACTGAGCCCCCGCCACAGAGGGGTCTCGGCTaGTGCCGCCCAGGCCCGACGCTCATGCCCGGCCAGGCTGGGTCT +
Preference number: 5 (lower is better)
Translates to: GSHDDTEPPPQRGLG*CRPGPTLMPGQAGS
Trigger: AGACCCAGCCTGGCCGGGCATGAGCGTCGGGCCTGGGCGGCAGCAGCCGAGACCCCTCTGTGGCGGGGGCTCAGTGTCGTCATGGCTCCC
73% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS CCA 90 bp CTGCCCTGCCCCCTCAGAGCCCATGCCTGGGTGGCCGAGTGGCCTTaGTCTAAGGGAGACCCTGTGTCCCCACAGGGCTCCCTGCGCCCG +
Preference number: 5 (lower is better)
Translates to: LPCPLRAHAWVAEWP*SKGDPVSPQGSLRP
Trigger: CGGGCGCAGGGAGCCCTGTGGGGACACAGGGTCTCCCTTAGACCAAGGCCACTCGGCCACCCAGGCATGGGCTCTGAGGGGGCAGGGCAG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528199.5
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
CDS-3UTR CAA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: AMAADPPVPKTARLPCLPSSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: AADPPVPKTARLPCLPKTSSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...GGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp TGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTAGCACCGGCAGGTCGTaGCTCCCGGTGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: WGYGGRPTSAQDREAALPSTGRS*LPVSTE
Trigger: CTCCGTGGACACCGGGAGCAACGACCTGCCGGTGCT...AGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS TCA 90 bp AGGCGAGTGTGGGACAGCGGTTCCAGGAAGGGCCTGAGGTGGGTCTaGCCCCAGGCCCGAGGCGGGTGGGACGGGTCTGCTGTGCAAGGC +
Preference number: 5 (lower is better)
Translates to: RRVWDSGSRKGLRWV*PQARGGWDGSAVQG
Trigger: GCCTTGCACAGCAGACCCGTCCCACCCGCCTCGGGCCTGGGGTCAGACCCACCTCAGGCCCTTCCTGGAACCGCTGTCCCACACTCGCCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 90 bp GGAGTCAATGAGGGCGGTCGGGGACAAGAGGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTCCTCTACCCGGGGGCTCTGAGGCGG +
Preference number: 5 (lower is better)
Translates to: GVNEGGRGQEGVHGR*APGTRLLYPGALRR
Trigger: CCGCCTCAGAGCCCCCGGGTAGAGGAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACCCTCTTGTCCCCGACCGCCCTCATTGACTCC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528838.6
ENST00000532338.5
ENST00000643217.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCCAGACCCGAGCCCGTTaGTCCTACTGGGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: AMAADPPVPKTARLPCLPQTRAR*SYWGYG
Trigger: GCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTG...GGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS GCA 90 bp CTGTGCCCTGCAGGGGTGCGGCTGGGCCTATGCTGGGCATCCCTTTaGCATGAGGGCCTGGGGGCCTTGGTGGCAGTGGACCCAGGAGAC +
Preference number: 5 (lower is better)
Translates to: LCPAGVRLGLCWASL*HEGLGALVAVDPGD
Trigger: GTCTCCTGGGTCCACTGCCACCAAGGCCCCCAGGCCCTCATGGCAAAGGGATGCCCAGCATAGGCCCAGCCGCACCCCTGCAGGGCACAG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS-3UTR CAA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACGGGAGACAGGAGCTCTaGGATGTCCAGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: GGRPTSAQDREAALPPQDGRQEL*DVQQGT
Trigger: AGTGCCCTGCTGGACATCCAAGAGCTCCTGTCTCCC...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCGAGACAGTGGGGTCCTaGGCTTTGGGAGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAETVGS*ALGGSE
Trigger: CTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS GCA 90 bp CCTGAGGTGGGTCTGACCCCAGGCCCGAGGCGGGTGGGACGGGTCTaGTGTGCAAGGCTTGTCCTCAAAAGTAGGCTGGTGGGTCCCGCC +
Preference number: 5 (lower is better)
Translates to: PEVGLTPGPRRVGRV*CARLVLKSRLVGPA
Trigger: GGCGGGACCCACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGACCCGTCCCACCCGCCTCGGGCCTGGGGTCAGACCCACCTCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 90 bp CCCCCACAGCACCCGGGGCCTCTTGGTGGGCGCCAGGACCCGCTGTaGCCCATAATGCTGGTGTGGGACCTACTGCTTCATGGCCAGGAG +
Preference number: 5 (lower is better)
Translates to: PPQHPGPLGGRQDPL*PIMLVWDLLLHGQE
Trigger: CTCCTGGCCATGAAGCAGTAGGTCCCACACCAGCATTATGGGCCACAGCGGGTCCTGGCGCCCACCAAGAGGCCCCGGGTGCTGTGGGGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS-3UTR CAA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPSSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGGGAGTGCGAGCCAAATaGTCCAGGCAGGCTACGCTG +
Preference number: 5 (lower is better)
Translates to: GRPTSAQDREAALPPQDQGVRAK*SRQATL
Trigger: CAGCGTAGCCTGCCTGGACAATTTGGCTCGCACTCC...CTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCAGCACCGGCAGGTCGTaGCTCCCGGTGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTSTGRS*LPVSTE
Trigger: CTCCGTGGACACCGGGAGCAACGACCTGCCGGTGCT...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGGTGGGGTCCTTGGCTTaGGGAGGCTCCGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PVCPTGAMAADPPVPKTAVGSLA*GGSEPV
Trigger: GACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC...CGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGTGGGGTCCTTGGCTTaGGGAGGCTCCGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAVGSLA*GGSEPV
Trigger: GACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS CCA 90 bp CCCGGATCCTGGCATCCATCCTGGCAAACACCTGGAGGGCTGCCTTaGACACAGGCCAGGAGCAGACCCTTGGGCCGCCCTTCCAAGGCC +
Preference number: 5 (lower is better)
Translates to: PGSWHPSWQTPGGLP*TQARSRPLGRPSKA
Trigger: GGCCTTGGAAGGGCGGCCCAAGGGTCTGCTCCTGGCCTGTGTCCAAGGCAGCCCTCCAGGTGTTTGCCAGGATGGATGCCAGGATCCGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 90 bp CCACTGCCCCTCCCTGCCGGGGACACCTGGTGTCACGTAGGGTGTTaGGGATGGATCCATGCGAGCCAGGTGCACCCGGATCCTGGCATC +
Preference number: 5 (lower is better)
Translates to: PLPLPAGDTWCHVGC*GWIHASQVHPDPGI
Trigger: GATGCCAGGATCCGGGTGCACCTGGCTCGCATGGATCCATCCCCAACACCCTACGTGACACCAGGTGTCCCCGGCAGGGAGGGGCAGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS-3UTR CAA 90 bp TTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCACGAGGGTCCACAGCTaGGTCAGGAAGGCCGGGACG +
Preference number: 5 (lower is better)
Translates to: FGRLRACQQGDGGVLGEATRVHS*VRKAGT
Trigger: CGTCCCGGCCTTCCTGACCAAGCTGTGGACCCTCGT...GGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGACGAGGGTCCACAGCTaGGTCAGGAAGGCCGGGACG +
Preference number: 5 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPTRVHS*VRKAGT
Trigger: CGTCCCGGCCTTCCTGACCAAGCTGTGGACCCTCGT...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCTTGGGCAGCACCTCCTaGGCAAACTGGCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRLGSTS*ANWPWS
Trigger: CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAA...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: LSYWGYGGRPTSAQDREATSVSS*VTLSWR
Trigger: CCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGT...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDTSVSS*VTLSWR
Trigger: CCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGT...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACGTTGACGACTTTCTGTaGCTGGGCATGCTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: GGRPTSAQDREAALPPQDVDDFL*LGMLLP
Trigger: CGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAAC...GTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGTGGGGTCCTTGGCTTaGGGAGGCTCCGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRVGSLA*GGSEPV
Trigger: GACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGAGACAGTGGGGTCCTaGGCTTTGGGAGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: PEVLPRPEPVCPTGAMAAETVGS*ALGGSE
Trigger: CTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC...GGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCAGACCCGAGCCCGTTaGTCCTACTGGGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPQTRAR*SYWGYG
Trigger: GCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTG...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCAGACCCGAGCCCGTTaGTCCTACTGGGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCQTRAR*SYWGYG
Trigger: GCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTG...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCCTGCAGGGAGACAGGAGCTCTaGGATACTGGCCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PPVPKTARLPCLPKTSPAGRQEL*DTGQAA
Trigger: AGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCCC...TGCAGGGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS GCA 90 bp AGAAGTAGGAGCCCTCTCCCAGCTCAAACAGCACCGGCAGGTCGTTaGTCCCGGTGTCCACGGAGCCGGGGTCCAGCAGGAACAGCGGCT +
Preference number: 5 (lower is better)
Translates to: RSRSPLPAQTAPAGR*SRCPRSRGPAGTAA
Trigger: AGCCGCTGTTCCTGCTGGACCCCGGCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGCTGTTTGAGCTGGGAGAGGGCTCCTACTTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528838.6
ENST00000532338.5
ENST00000614796.1
ENST00000643099.1
ENST00000643217.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACTTGGGCAGCACCTCCTaGGCAAACTGGCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDLGSTS*ANWPWS
Trigger: CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAA...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGATTGGGCAGCACCTCCTaGGCAAACTGGCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRLGSTS*ANWPWS
Trigger: CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAA...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGATCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGSSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp GCTGGCAGGAGCCAGCTCGGTGATGTCGGAGATGATGGGTCCAGAGCTGGCCACACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: AGRSQLGDVGDDGSRAGHTSVSS*VTLSWR
Trigger: CCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGT...GTGGCCAGCTCTGGACCCATCATCTCCGACATCACCGAGCTGGCTCCTGCCAGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp GGGAGGGGGCCGAGTAGGGGCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: GRGPSRGPSRGRAPGRTANCRLY*GMECAE
Trigger: CTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT...GGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGCCCCTACTCGGCCCCCTCCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp TTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGAGACAGTGGGGTCCTaGGCTTTGGGAGGCTCCGAG +
Preference number: 5 (lower is better)
Translates to: FGRLRACQQGDGGVLGEAETVGS*ALGGSE
Trigger: CTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC...GGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCAGACCCGAGCCCGTTaGTCCTACTGGGGCTATGGC +
Preference number: 5 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDQTRAR*SYWGYG
Trigger: GCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTG...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGGGAGACAGGAGCTCTaGGATACTGGCCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCGRQEL*DTGQAA
Trigger: AGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCCC...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS GCA 90 bp TCTGCCGAAGGCTGGCCACCTCCCGCCACAGAGCCTCATTCTCACTaGAACAGACCAGGCTGGGTCAGTGGGGCCCAATCCCATGAGCCC +
Preference number: 5 (lower is better)
Translates to: SAEGWPPPATEPHSH*NRPGWVSGAQSHEP
Trigger: GGGCTCATGGGATTGGGCCCCACTGACCCAGCCTGGTCTGTTGCAGTGAGAATGAGGCTCTGTGGCGGGAGGTGGCCAGCCTTCGGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527328.5
ENST00000531447.2
ENST00000532338.5
ENST00000642697.1
ENST00000644444.1
ENST00000644450.1
CDS CCA 90 bp CACGGAGCCGAGGAAGCCGTACTGGCATTGGGGTTCCCGCATGCCTaGAGCCCCAAAGTGGACGTGAGACCTGAGCTGGCCTTCCGAGGT +
Preference number: 5 (lower is better)
Translates to: HGAEEAVLALGFPHA*SPKVDVRPELAFRG
Trigger: ACCTCGGAAGGCCAGCTCAGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTACGGCTTCCTCGGCTCCGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 90 bp TGGGCCTATGCTGGGCATCCCTTTGCCATGAGGGCCTGGGGGCCTTaGTGGCAGTGGACCCAGGAGACAAGGGGCGTATTCAGCTCCAGC +
Preference number: 5 (lower is better)
Translates to: WAYAGHPFAMRAWGP*WQWTQETRGVFSSS
Trigger: GCTGGAGCTGAATACGCCCCTTGTCTCCTGGGTCCACTGCCACCAAGGCCCCCAGGCCCTCATGGCAAAGGGATGCCCAGCATAGGCCCA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS CCA 90 bp GGGTGGGACGGGTCTGCTGTGCAAGGCTTGTCCTCAAAAGTAGGCTaGTGGGTCCCGCCAAGCTCGGAGCCAGGCAGAAGCCAATGGCCC +
Preference number: 5 (lower is better)
Translates to: GWDGSAVQGLSSKVG*WVPPSSEPGRSQWP
Trigger: GGGCCATTGGCTTCTGCCTGGCTCCGAGCTTGGCGGGACCCACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGACCCGTCCCACCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS-3UTR CAA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGACGAGGGTCCACAGCTaGGTCAGGAAGGCCGGGACG +
Preference number: 5 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGTRVHS*VRKAGT
Trigger: CGTCCCGGCCTTCCTGACCAAGCTGTGGACCCTCGT...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCGCCATGTTGTTGTGCTaGAAGTACTTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAAMLLC*KYLGST
Trigger: GGTGCTGCCCAAGTACTTCAAGCACAACAACATGGC...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGSSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RQWGPWLWEAPSLSAGRWTSVSS*VTLSWR
Trigger: CCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGT...CCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp GCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTCCCCCAGGATCCGGTTaGACTGCACCAGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: AQTRARLSYWGYGGRPTSPPGSG*TAPVRS
Trigger: TGATCTCACTGGTGCAGTCAAACCGGATCCTGGGGG...ACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp TGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGAAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: WRPTHQCPRPRGCPASPRNCRLY*GMECAE
Trigger: CTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT...TCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGGGAGTGCGAGCCAAATaGTCCAGGCAGGCTACGCTG +
Preference number: 5 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRGVRAK*SRQATL
Trigger: CAGCGTAGCCTGCCTGGACAATTTGGCTCGCACTCC...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp TGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACATTCCCTGGCTGGACTaGGCCATGCGGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: CCPDPSPFVLLGLWRPTHIPWLD*AMRRGR
Trigger: TCTTCCTCTCCGCATGGCCAAGTCCAGCCAGGGAAT...GTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp GGCAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCAATTCCCTGGCTGGACTaGGCCATGCGGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: GRLMSGTVTEGLNRSSRAIPWLD*AMRRGR
Trigger: TCTTCCTCTCCGCATGGCCAAGTCCAGCCAGGGAAT...TGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTGCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CAA 90 bp GTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGAGCACCGGCAGGTCGTaGCTCCCGGTGTCCACGGAG +
Preference number: 5 (lower is better)
Translates to: VSPGVAVKPQPNHRTRGWSTGRS*LPVSTE
Trigger: CTCCGTGGACACCGGGAGCAACGACCTGCCGGTGCT...CCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GAGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGGTCCTTGGCTTaGGGAGGCTCCGAGCCTGTC +
Preference number: 5 (lower is better)
Translates to: ETVGSLALGGSEPVSREMVGSLA*GGSEPV
Trigger: GACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCAC...CATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp CAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGGAGACAGGAGCTCTaGGATACTGGCCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: QAHVGHGHRGAEQVQQGTGRQEL*DTGQAA
Trigger: AGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCCC...AGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS TCA 90 bp TGGACACAGGCCAGGAGCAGACCCTTGGGCCGCCCTTCCAAGGCCTaGGCAGCCAGGTTAAGGGAGGACGGTTCTTCAGGCTGCGACACT +
Preference number: 5 (lower is better)
Translates to: WTQARSRPLGRPSKA*AARLREDGSSGCDT
Trigger: AGTGTCGCAGCCTGAAGAACCGTCCTCCCTTAACCTGGCTGCTCAGGCCTTGGAAGGGCGGCCCAAGGGTCTGCTCCTGGCCTGTGTCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS GCA 90 bp AGTGGCCTTGGTCTAAGGGAGACCCTGTGTCCCCACAGGGCTCCCTaGGCCCGACACACGTGGAGTACAGCTCCGGCTTCACGGTTCTTC +
Preference number: 5 (lower is better)
Translates to: SGLGLRETLCPHRAP*ARHTWSTAPASRFF
Trigger: GAAGAACCGTGAAGCCGGAGCTGTACTCCACGTGTGTCGGGCGCAGGGAGCCCTGTGGGGACACAGGGTCTCCCTTAGACCAAGGCCACT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528199.5
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
CDS GCA 90 bp GTGCAGTCAGCACCGCAGTCTGGATCCTGCCAACACCAGAGGCCGTaGCAGAGCAGGGAGGCCTGTCCCTGTCATCCCTGTCACAGGCAA +
Preference number: 5 (lower is better)
Translates to: VQSAPQSGSCQHQRP*QSREACPCHPCHRQ
Trigger: TTGCCTGTGACAGGGATGACAGGGACAGGCCTCCCTGCTCTGGCACGGCCTCTGGTGTTGGCAGGATCCAGACTGCGGTGCTGACTGCAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS CCA 90 bp GCTGGGCATCCCTTTGCCATGAGGGCCTGGGGGCCTTGGTGGCAGTaGACCCAGGAGACAAGGGGCGTATTCAGCTCCAGCACAAGGATC +
Preference number: 5 (lower is better)
Translates to: AGHPFAMRAWGPWWQ*TQETRGVFSSSTRI
Trigger: GATCCTTGTGCTGGAGCTGAATACGCCCCTTGTCTCCTGGGTCCACTGCCACCAAGGCCCCCAGGCCCTCATGGCAAAGGGATGCCCAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS-3UTR CAA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGTTGGGCAGCACCTCCTaGGCAAACTGGCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGLGSTS*ANWPWS
Trigger: CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAA...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 5 (lower is better)
Translates to: PTHQCPRPRGCPASPRPAKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGGGTCAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: RVSPGVAVKPQPNHRTRGTSVSS*VTLSWR
Trigger: CCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGT...ACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTGACCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCCCCCCAGGATCCGGTTaGACTGCACCAGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTPPGSG*TAPVRS
Trigger: TGATCTCACTGGTGCAGTCAAACCGGATCCTGGGGG...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
63% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCCCCAGGATCCGGTTaGACTGCACCAGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRPPGSG*TAPVRS
Trigger: TGATCTCACTGGTGCAGTCAAACCGGATCCTGGGGG...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCCCCCAGGATCCGGTTaGACTGCACCAGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: SPFVLLGLWRPTHQCPRPPPGSG*TAPVRS
Trigger: TGATCTCACTGGTGCAGTCAAACCGGATCCTGGGGG...CGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GCAGGAACAGCGGCTGCGCTGTGTAGTGCACCAGCTGCTTCCCTGAATCCGGGCGGAGTGCGAGCCAAATaGTCCAGGCAGGCTACGCTG +
Preference number: 5 (lower is better)
Translates to: AGTAAALCSAPAASLNPGGVRAK*SRQATL
Trigger: CAGCGTAGCCTGCCTGGACAATTTGGCTCGCACTCC...GCCCGGATTCAGGGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CAA 90 bp CCGACCCACCAGTGCCCAAGACCGCGAGGCTGCCCTGCCTCCCCAAGACCAGCCTGCAGGTTATCCAGGTaGGAGTCCATAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: PTHQCPRPRGCPASPRPACRLSR*ESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCA...GGCTGGTCTTGGGGAGGCAGGGCAGCCTCGCGGTCTTGGGCACTGGTGGGTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCTCACTGAGCTCATTCTaGTCCAGGCAGGCTACGCTG +
Preference number: 5 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCSLSSF*SRQATL
Trigger: CAGCGTAGCCTGCCTGGACAAGAATGAGCTCAGTGA...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS-3UTR CAA 90 bp ACGGTCACCGAGGGGCTGAACAGGTCCAGCAGGGCACTGGTGTCCACGCTGAAGGGGAGACAGGAGCTCTaGGATACTGGCCAGGCTGCT +
Preference number: 5 (lower is better)
Translates to: TVTEGLNRSSRALVSTLKGRQEL*DTGQAA
Trigger: AGCAGCCTGGCCAGTATCCAAGAGCTCCTGTCTCCC...CTTCAGCGTGGACACCAGTGCCCTGCTGGACCTGTTCAGCCCCTCGGTGACCGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS TCA 90 bp ATTGGGGTTCCCGCATGCCTGGAGCCCCAAAGTGGACGTGAGACCTaGGCTGGCCTTCCGAGGTGGGCTTGCCTCAGTTTCTCAGGTGCC +
Preference number: 5 (lower is better)
Translates to: IGVPACLEPQSGRET*AGLPRWACLSFSGA
Trigger: GGCACCTGAGAAACTGAGGCAAGCCCACCTCGGAAGGCCAGCTCAGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS GCA 90 bp GGGTTGGTGAGGTTTCCCGTTGCACTGGGAAAACAGGTGGGGCTCTaGTCAGTGTGTGGGTGGCTCAGTCCCTGCCCTGGTGCTGCTGTG +
Preference number: 5 (lower is better)
Translates to: GLVRFPVALGKQVGL*SVCGWLSPCPGAAV
Trigger: CACAGCAGCACCAGGGCAGGGACTGAGCCACCCACACACTGAGCAGAGCCCCACCTGTTTTCCCAGTGCAACGGGAAACCTCACCAACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS CCA 90 bp AGGGTGTTGGGGATGGATCCATGCGAGCCAGGTGCACCCGGATCCTaGCATCCATCCTGGCAAACACCTGGAGGGCTGCCTTGGACACAG +
Preference number: 5 (lower is better)
Translates to: RVLGMDPCEPGAPGS*HPSWQTPGGLPWTQ
Trigger: CTGTGTCCAAGGCAGCCCTCCAGGTGTTTGCCAGGATGGATGCCAGGATCCGGGTGCACCTGGCTCGCATGGATCCATCCCCAACACCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 90 bp CCTCTTGGTGGGCGCCAGGACCCGCTGTGGCCCATAATGCTGGTGTaGGACCTACTGCTTCATGGCCAGGAGCTTGGAGTCCATGCACTC +
Preference number: 5 (lower is better)
Translates to: PLGGRQDPLWPIMLV*DLLLHGQELGVHAL
Trigger: GAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCCCACACCAGCATTATGGGCCACAGCGGGTCCTGGCGCCCACCAAGAGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS CCA 90 bp CGCCCGACACACGTGGAGTACAGCTCCGGCTTCACGGTTCTTCCATaGGGACCCCAGGTTCATACCCACAAGGACCCTCCCCCATGGAAG +
Preference number: 5 (lower is better)
Translates to: RPTHVEYSSGFTVLP*GPQVHTHKDPPPWK
Trigger: CTTCCATGGGGGAGGGTCCTTGTGGGTATGAACCTGGGGTCCCCATGGAAGAACCGTGAAGCCGGAGCTGTACTCCACGTGTGTCGGGCG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 90 bp TGGGACGGGTCTGCTGTGCAAGGCTTGTCCTCAAAAGTAGGCTGGTaGGTCCCGCCAAGCTCGGAGCCAGGCAGAAGCCAATGGCCCAGA +
Preference number: 5 (lower is better)
Translates to: WDGSAVQGLSSKVGW*VPPSSEPGRSQWPR
Trigger: TCTGGGCCATTGGCTTCTGCCTGGCTCCGAGCTTGGCGGGACCCACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGACCCGTCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS-3UTR CAA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTACGAGGGTCCACAGCTaGGTCAGGAAGGCCGGGACG +
Preference number: 5 (lower is better)
Translates to: VLGQHLLGKLALVEHVEATRVHS*VRKAGT
Trigger: CGTCCCGGCCTTCCTGACCAAGCTGTGGACCCTCGT...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGCCATGTTGTTGTGCTaGAAGTACTTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRAMLLC*KYLGST
Trigger: GGTGCTGCCCAAGTACTTCAAGCACAACAACATGGC...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCGCCATGTTGTTGTGCTaGAAGTACTTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCAMLLC*KYLGST
Trigger: GGTGCTGCCCAAGTACTTCAAGCACAACAACATGGC...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGGTTGACGACTTTCTGTaGCTGGGCATGCTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRVDDFL*LGMLLP
Trigger: CGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAAC...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGTTGACGACTTTCTGTaGCTGGGCATGCTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTVDDFL*LGMLLP
Trigger: CGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAAC...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGTAGGGGCCCGAGCCGTGGACGTGCTCCAGGGAGAACTGCCGGCTATACTTGGCCCCCAGGATCCGGTTaGACTGCACCAGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: SRGPSRGRAPGRTAGYTWPPGSG*TAPVRS
Trigger: TGATCTCACTGGTGCAGTCAAACCGGATCCTGGGGG...CCAAGTATAGCCGGCAGTTCTCCCTGGAGCACGTCCACGGCTCGGGCCCCTACT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp GGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAGTAGGAGCCCTCTCCCAGAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: GGVLGEAVPFGEVGALSQNCRLY*GMECAE
Trigger: CTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT...CTGGGAGAGGGCTCCTACTTCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGATTCCCTGGCTGGACTaGGCCATGCGGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGIPWLD*AMRRGR
Trigger: TCTTCCTCTCCGCATGGCCAAGTCCAGCCAGGGAAT...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp GCAGGAACAGCGGCTGCGCTGTGTAGTGCACCAGCTGCTTCCCTGAATCCGGGCATTCCCTGGCTGGACTaGGCCATGCGGAGAGGAAGA +
Preference number: 5 (lower is better)
Translates to: AGTAAALCSAPAASLNPGIPWLD*AMRRGR
Trigger: TCTTCCTCTCCGCATGGCCAAGTCCAGCCAGGGAAT...GCCCGGATTCAGGGAAGCAGCTGGTGCACTACACAGCGCAGCCGCTGTTCCTGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CAA 90 bp CAGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGGGAGACAGGAGCTCTaGGATGTCCAGCAGGGCACT +
Preference number: 5 (lower is better)
Translates to: QSRCGCEAPTKPQDTGLGGRQEL*DVQQGT
Trigger: AGTGCCCTGCTGGACATCCAAGAGCTCCTGTCTCCC...CCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACTG
62% GC, longest homopolymer 7 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCAGATCTCTGCCTGTCTaGTCCGTCCATCCACTGTGT +
Preference number: 5 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRRSLPV*SVHPLC
Trigger: ACACAGTGGATGGACGGACAAGACAGGCAGAGATCT...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS TCA 90 bp TACTGGCATTGGGGTTCCCGCATGCCTGGAGCCCCAAAGTGGACGTaGGACCTGAGCTGGCCTTCCGAGGTGGGCTTGCCTCAGTTTCTC +
Preference number: 5 (lower is better)
Translates to: YWHWGSRMPGAPKWT*DLSWPSEVGLPQFL
Trigger: GAGAAACTGAGGCAAGCCCACCTCGGAAGGCCAGCTCAGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 90 bp TTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTGTTCCCGCAGCCGCAGGCGGTGGCT +
Preference number: 5 (lower is better)
Translates to: LCLKYLGSTSLANWP*SNTWKLFPQPQAVA
Trigger: AGCCACCGCCTGCGGCTGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533240.5
ENST00000643086.1
CDS-3UTR CAA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTTTGGGCAGCACCTCCTaGGCAAACTGGCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: VLGQHLLGKLALVEHVEALGSTS*ANWPWS
Trigger: CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAA...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp GACCAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGTTGTGCTTGAAGTACTaGGGCAGCACCTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: DQRCCPDPSPFVLLGLWRLCLKY*GSTSLA
Trigger: TGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA...CCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTGGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGATTGTGCTTGAAGTACTaGGGCAGCACCTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SLSAGRWWGPRRSRPLRRLCLKY*GSTSLA
Trigger: TGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA...TCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCTTGTGCTTGAAGTACTaGGGCAGCACCTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTLCLKY*GSTSLA
Trigger: TGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACGCCATGTTGTTGTGCTaGAAGTACTTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDAMLLC*KYLGST
Trigger: GGTGCTGCCCAAGTACTTCAAGCACAACAACATGGC...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 5 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp TGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 5 (lower is better)
Translates to: CCPDPSPFVLLGLWRPTHKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...GTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQISSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp CAGAGGTGCTGCCCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGCTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: QRCCPDPSPFVLLGLWRPLVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...CGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGGGCAGCACCTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: SLSAGRWWGPRRSRPLRRNCRLY*GMECAE
Trigger: CTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT...TCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp CGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RARLSYWGYGGRPTSAQDNCRLY*GMECAE
Trigger: CTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT...GTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCAGACCCGAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCTGCAGGTTATCCAGGTaGGAGTCCATAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: PDPSPFVLLGLWRPTHQCCRLSR*ESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCA...GCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTCGGGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCTGCAGGTTATCCAGGTaGGAGTCCATAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: ARLSYWGYGGRPTSAQDRCRLSR*ESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCA...GCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp CCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAAGATCTCTGCCTGTCTaGTCCGTCCATCCACTGTGT +
Preference number: 5 (lower is better)
Translates to: PFVLLGLWRPTHQCPRPRRSLPV*SVHPLC
Trigger: ACACAGTGGATGGACGGACAAGACAGGCAGAGATCT...TCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS GCA 90 bp GGGACCTACTGCTTCATGGCCAGGAGCTTGGAGTCCATGCACTCCTaGTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: GTYCFMARSLESMHS*FPFISCTSVSSLVT
Trigger: CGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS GCA 90 bp GCTGGTGTGGGACCTACTGCTTCATGGCCAGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: AGVGPTASWPGAWSP*TPASPSSAARPSAA
Trigger: AGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCCCACACCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS-3UTR CAA 90 bp TTGTTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGACGAGGGTCCACAGCTaGGTCAGGAAGGCCGGGACG +
Preference number: 5 (lower is better)
Translates to: LLCLKYLGSTSLANWPWSTRVHS*VRKAGT
Trigger: CGTCCCGGCCTTCCTGACCAAGCTGTGGACCCTCGT...CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGTTGGGCAGCACCTCCTaGGCAAACTGGCCCTGGTCG +
Preference number: 5 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKLGSTS*ANWPWS
Trigger: CGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAA...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp AGCCTGTCAGCAGGGAGATGGTGGGGTCCTCGGCGAAGCCGTCCCCTTCGGAGAAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 5 (lower is better)
Translates to: SLSAGRWWGPRRSRPLRRKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...TCTCCGAAGGGGACGGCTTCGCCGAGGACCCCACCATCTCCCTGCTGACAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp TTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCGCGAGGCTCTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: LSYWGYGGRPTSAQDREALVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...AGCCTCGCGGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp GAGCCCGTTTGTCCTACTGGGGCTATGGCGGCCGACCCACCAGTGCCCAAGACCCTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: EPVCPTGAMAADPPVPKTLVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...GGTCTTGGGCACTGGTGGGTCGGCCGCCATAGCCCCAGTAGGACAAACGGGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGG +
Preference number: 5 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRTSVSS*VTLSWR
Trigger: CCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGT...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGGTTGACGACTTTCTGTaGCTGGGCATGCTTCTGCCG +
Preference number: 5 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGVDDFL*LGMLLP
Trigger: CGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAAC...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS-3UTR CAA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGAAACTGCCGGCTATACTaGGGCATGGAATGTGCTGAG +
Preference number: 5 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGNCRLY*GMECAE
Trigger: CTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp AGTCCAGGTGTGGCTGTGAAGCCCCAACCAAACCACAGGACACGGGGTTGGGGGTCACTGAGCTCATTCTaGTCCAGGCAGGCTACGCTG +
Preference number: 5 (lower is better)
Translates to: SPGVAVKPQPNHRTRGWGSLSSF*SRQATL
Trigger: CAGCGTAGCCTGCCTGGACAAGAATGAGCTCAGTGA...CCCCCAACCCCGTGTCCTGTGGTTTGGTTGGGGCTTCACAGCCACACCTGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000528838.6
ENST00000646252.2
CDS CCA 90 bp TTGTGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTGTTCCCGCTCGGGCTCCAGCAGATG +
Preference number: 5 (lower is better)
Translates to: LCLKYLGSTSLANWP*SNTWKLFPLGLQQM
Trigger: CATCTGCTGGAGCCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS CCA 90 bp GCCCATAATGCTGGTGTGGGACCTACTGCTTCATGGCCAGGAGCTTaGAGTCCATGCACTCCTGCTTCCCCTTCATCAGCTGCACGTCCG +
Preference number: 5 (lower is better)
Translates to: AHNAGVGPTASWPGA*SPCTPASPSSAARP
Trigger: CGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCCCACACCAGCATTATGGGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS-3UTR CAA 90 bp GACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTTTGTGCTTGAAGTACTaGGGCAGCACCTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: DSGVLGFGRLRACQQGDGLCLKY*GSTSLA
Trigger: TGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA...ACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS-3UTR CAA 90 bp AACTGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCTCGTCTCTCTCTGGCTaGACCAGGCCGCCCTGCTCG +
Preference number: 5 (lower is better)
Translates to: NCRLYLGMECAEPLSFSISSLSG*TRPPCS
Trigger: CGAGCAGGGCGGCCTGGTCAAGCCAGAGAGAGACGA...GATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCAGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp AGAGCTGGCCACAGCATCAGGGGCGTAGAGGCTGGAGCTGCTGTAGGCTGGGGACTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: RAGHSIRGVEAGAAVGWGLVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...TCCCCAGCCTACAGCAGCTCCAGCCTCTACGCCCCTGATGCTGTGGCCAGCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp TCAAGGTCAGGCAGGCTCATGTCGGGCACGGTCACCGAGGGGCTGAACAGGTCCTGCAGGTTATCCAGGTaGGAGTCCATAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: SRSGRLMSGTVTEGLNRSCRLSR*ESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCA...GGACCTGTTCAGCCCCTCGGTGACCGTGCCCGACATGAGCCTGCCTGACCTTGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS-3UTR CAA 90 bp AGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGGTGGGTGCAGGTTATCCAGGTaGGAGTCCATAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: SGVLGFGRLRACQQGDGGCRLSR*ESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCA...CCCACCATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS GCA 90 bp CTGAATGAGTGCTTCATGGCCAGGAGCTTGGAGTCCATGCACTCCTaGTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: LNECFMARSLESMHS*FPFISCTSVSSLVT
Trigger: CGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCACTCATTCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS-3UTR CAA 90 bp GAGACAGTGGGGTCCTTGGCTTTGGGAGGCTCCGAGCCTGTCAGCAGGGAGATGCTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: ETVGSLALGGSEPVSREMLVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...CATCTCCCTGCTGACAGGCTCGGAGCCTCCCAAAGCCAAGGACCCCACTGTCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000400780.8
ENST00000643217.1
CDS TCA 90 bp ACTCCTGCTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCTTTATGTCTTCACTCTTCAGGGTGG +
Preference number: 5 (lower is better)
Translates to: TPASPSSAARPSAAW*RCPGGSLCLHSSGW
Trigger: CCACCCTGAAGAGTGAAGACATAAAGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS GCA 90 bp TCATTCTCATGCTTCATGGCCAGGAGCTTGGAGTCCATGCACTCCTaGTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTTGGTGACG +
Preference number: 5 (lower is better)
Translates to: SFSCFMARSLESMHS*FPFISCTSVSSLVT
Trigger: CGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCATGAGAATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000533240.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000646252.2
CDS GCA 90 bp ACAGAGCCTCATTCTCATGCTTCATGGCCAGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: TEPHSHASWPGAWSP*TPASPSSAARPSAA
Trigger: AGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCATGAGAATGAGGCTCTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000533240.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000646252.2
CDS CCA 90 bp CCCTTCATCAGCTGCACGTCCGTCAGCAGCTTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCACTCTTCAGGGTGGACACACTGGTC +
Preference number: 5 (lower is better)
Translates to: PFISCTSVSSLVTLS*RIFMSSLFRVDTLV
Trigger: GACCAGTGTGTCCACCCTGAAGAGTGAAGACATAAAGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS-3UTR CAA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTGCCATGTTGTTGTGCTaGAAGTACTTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: VLGQHLLGKLALVEHVEAAMLLC*KYLGST
Trigger: GGTGCTGCCCAAGTACTTCAAGCACAACAACATGGC...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp TGCCGGCTATACTTGGGCATGGAATGTGCTGAGCCACTGTCGTTCAGCATCAGGCCCCCAGGATCCGGTTaGACTGCACCAGTGAGATCA +
Preference number: 5 (lower is better)
Translates to: CRLYLGMECAEPLSFSIRPPGSG*TAPVRS
Trigger: TGATCTCACTGGTGCAGTCAAACCGGATCCTGGGGG...CCTGATGCTGAACGACAGTGGCTCAGCACATTCCATGCCCAAGTATAGCCGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000534314.5
ENST00000643951.1
CDS GCA 90 bp CAAGGATCAGGGATTTCAGTGTTCAGGGTTGGTGAGGTTTCCCGTTaGACTGGGAAAACAGGTGGGGCTCTGCTCAGTGTGTGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: QGSGISVFRVGEVSR*TGKTGGALLSVWVA
Trigger: AGCCACCCACACACTGAGCAGAGCCCCACCTGTTTTCCCAGTGCAACGGGAAACCTCACCAACCCTGAACACTGAAATCCCTGATCCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS GCA 90 bp CAGACAATCACTGATTTACTTCTGCAAACCGGAGCTGTCCGGTCTTaGAGGGTCGGACCATGTAAACAAGCCTGCTGCCAGGCAACGGGC +
Preference number: 5 (lower is better)
Translates to: QTITDLLLQTGAVRS*RVGPCKQACCQATG
Trigger: GCCCGTTGCCTGGCAGCAGGCTTGTTTACATGGTCCGACCCTGCAAGACCGGACAGCTCCGGTTTGCAGAAGTAAATCAGTGATTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTTTGTGCTTGAAGTACTaGGGCAGCACCTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQILCLKY*GSTSLA
Trigger: TGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp AGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTCTTGTGCTTGAAGTACTaGGGCAGCACCTCCTTGGCA +
Preference number: 5 (lower is better)
Translates to: RARLGRTRRHSRDVNSRFLCLKY*GSTSLA
Trigger: TGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCACAA...GAATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp GTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGCTCTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: VLGQHLLGKLALVEHVEALVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...AGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp CATGGTCTGCAGGTTATCCAGGTTGGAGTCCATAGCATCCAAGTGGTCACTGAGGGAGTGCGAGCCAAATaGTCCAGGCAGGCTACGCTG +
Preference number: 5 (lower is better)
Translates to: HGLQVIQVGVHSIQVVTEGVRAK*SRQATL
Trigger: CAGCGTAGCCTGCCTGGACAATTTGGCTCGCACTCC...CTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGATAACCTGCAGACCATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS CCA 90 bp AGCATGGTCTGCAGGTTATCCAGGTTGGAGTCCATAGCATCCAAGTaGTCACTGAGCTCATTCCTGGCCCGGGATAAGGCGGTACCTGAA +
Preference number: 5 (lower is better)
Translates to: SMVCRLSRLESIASK*SLSSFLARDKAVPE
Trigger: TTCAGGTACCGCCTTATCCCGGGCCAGGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGATAACCTGCAGACCATGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS-3UTR CAA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGGCCATGTTGTTGTGCTaGAAGTACTTGGGCAGCACC +
Preference number: 5 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRAMLLC*KYLGST
Trigger: GGTGCTGCCCAAGTACTTCAAGCACAACAACATGGC...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp CAGAGCAAGACTCGGTCGGACACGACGTCACAGCCGGGATGTGAACAGCAGATTAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 5 (lower is better)
Translates to: QSKTRSDTTSQPGCEQQIKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...AATCTGCTGTTCACATCCCGGCTGTGACGTCGTGTCCGACCGAGTCTTGCTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTGGAAGAAGCTGGCCATGTTGTaGTGCTTGAAGTACTTGGGC +
Preference number: 5 (lower is better)
Translates to: KYLGSTSLANWPWSNTWKKLAML*CLKYLG
Trigger: GCCCAAGTACTTCAAGCACAACAACATGGCCAGCTT...CTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp ACACTGGTCACTTTCCTCTTGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGCTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGC +
Preference number: 5 (lower is better)
Translates to: TLVTFLLMFSRSCSWPRRLVTFL*MFSRSC
Trigger: GCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAG...CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS-3UTR CAA 90 bp ATCCAGGTTGGAGTCCATAGCATCCAAGTGGTCACTGAGCTCATTCCCTGGCTGTGCAGGTTATCCAGGTaGGAGTCCATAGCATCCAAG +
Preference number: 5 (lower is better)
Translates to: IQVGVHSIQVVTELIPWLCRLSR*ESIASK
Trigger: CTTGGATGCTATGGACTCCAACCTGGATAACCTGCA...CAGCCAGGGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000530661.1
ENST00000646970.1
CDS CCA 72 bp CCCAGGCCCGACGCTCATGCCCGGCCAGGCTGGGTCTaGTCCACGGCTGTGTGGGAGGGCCCGAGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: PRPDAHARPGWV*STAVWEGPSAG
Trigger: GCCAGCGCTCGGGCCCTCCCACACAGCCGTGGACCAGACCCAGCCTGGCCGGGCATGAGCGTCGGGCCTGGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS GCA 72 bp GGGGTCTCGGCTGCTGCCGCCCAGGCCCGACGCTCATaGCCGGCCAGGCTGGGTCTGGTCCACGGCTGTGTG +
Preference number: 6 (lower is better)
Translates to: GVSAAAAQARRS*PARLGLVHGCV
Trigger: CACACAGCCGTGGACCAGACCCAGCCTGGCCGGGCATGAGCGTCGGGCCTGGGCGGCAGCAGCCGAGACCCC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS TCA 72 bp GGGGGCAGCTCTGCCTCAGGGCGGGACCAGAACCCCTaGAGAGCGGCCACTGCTCCAGGAGGCTGCTGCGGG +
Preference number: 6 (lower is better)
Translates to: GGSSASGRDQNP*RAATAPGGCCG
Trigger: CCCGCAGCAGCCTCCTGGAGCAGTGGCCGCTCTTCAGGGGTTCTGGTCCCGCCCTGAGGCAGAGCTGCCCCC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528199.5
ENST00000529630.1
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
ENST00000646807.1
CDS GCA 72 bp CCATGGAAGAGGCGGCTGCTCCCCGGCCCCCAGGCTTaGAGGGTCCCACGCCATGCCCTTGGCCAGCACAGG +
Preference number: 6 (lower is better)
Translates to: PWKRRLLPGPQA*RVPRHALGQHR
Trigger: CCTGTGCTGGCCAAGGGCATGGCGTGGGACCCTGCAAGCCTGGGGGCCGGGGAGCAGCCGCCTCTTCCATGG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 72 bp GAGGGCGGTCGGGGACAAGAGGGTGTCCACGGAAGATaGGCGCCCGGGACTCGCCTCCTCTACCCGGGGGCT +
Preference number: 6 (lower is better)
Translates to: EGGRGQEGVHGR*APGTRLLYPGA
Trigger: AGCCCCCGGGTAGAGGAGGCGAGTCCCGGGCGCCCATCTTCCGTGGACACCCTCTTGTCCCCGACCGCCCTC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528838.6
ENST00000532338.5
ENST00000643217.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS GCA 72 bp CCAGGGCCAGGGCTTGCTGGTCCCACTGCCCCTCCCTaGCGGGGACACCTGGTGTCACGTAGGGTGTTGGGG +
Preference number: 6 (lower is better)
Translates to: PGPGLAGPTAPP*RGHLVSRRVLG
Trigger: CCCCAACACCCTACGTGACACCAGGTGTCCCCGGCAGGGAGGGGCAGTGGGACCAGCAAGCCCTGGCCCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp GCCACTGCTCCAGGAGGCTGCTGCGGGGCTTGGCCATaGTCAGACCCTGCCCTGCCCCCTCAGAGCCCATGC +
Preference number: 6 (lower is better)
Translates to: ATAPGGCCGAWP*SDPALPPQSPC
Trigger: GCATGGGCTCTGAGGGGGCAGGGCAGGGTCTGACCATGGCCAAGCCCCGCAGCAGCCTCCTGGAGCAGTGGC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000528199.5
ENST00000529630.1
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
ENST00000646807.1
CDS CCA 72 bp CGGCCCCCAGGCTTGCAGGGTCCCACGCCATGCCCTTaGCCAGCACAGGACGCCCCGTCCTTCATCACAGGG +
Preference number: 6 (lower is better)
Translates to: RPPGLQGPTPCP*PAQDAPSFITG
Trigger: CCCTGTGATGAAGGACGGGGCGTCCTGTGCTGGCCAAGGGCATGGCGTGGGACCCTGCAAGCCTGGGGGCCG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS TCA 72 bp GGTGCGGCTGGGCCTATGCTGGGCATCCCTTTGCCATaGGGGCCTGGGGGCCTTGGTGGCAGTGGACCCAGG +
Preference number: 6 (lower is better)
Translates to: GAAGPMLGIPLP*GPGGLGGSGPR
Trigger: CCTGGGTCCACTGCCACCAAGGCCCCCAGGCCCTCATGGCAAAGGGATGCCCAGCATAGGCCCAGCCGCACC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS GCA 72 bp GCACAGGACGCCCCGTCCTTCATCACAGGGTCCTCCTaGTGGGGTCCCGCCATCTGCAGGTCTGCCTCCCGC +
Preference number: 6 (lower is better)
Translates to: AQDAPSFITGSS*WGPAICRSASR
Trigger: GCGGGAGGCAGACCTGCAGATGGCGGGACCCCAGCAGGAGGACCCTGTGATGAAGGACGGGGCGTCCTGTGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 72 bp CACAGGCTGGAGGGGGCAGCGCATTCGAGGACGGCCTaGAAGGCAGTGGAGGCTCTGTGCCCTGCAGGGGTG +
Preference number: 6 (lower is better)
Translates to: HRLEGAAHSRTA*KAVEALCPAGV
Trigger: CACCCCTGCAGGGCACAGAGCCTCCACTGCCTTCCAGGCCGTCCTCGAATGCGCTGCCCCCTCCAGCCTGTG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS CCA 72 bp CGAACACGTGGAAGCTGTTCCCGCAGCCGCAGGCGGTaGCTCTGCCCCTCACCGGACACGACGTCACAGCCG +
Preference number: 6 (lower is better)
Translates to: RTRGSCSRSRRR*LCPSPDTTSQP
Trigger: CGGCTGTGACGTCGTGTCCGGTGAGGGGCAGAGCCACCGCCTGCGGCTGCGGGAACAGCTTCCACGTGTTCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000533240.5
ENST00000643086.1
CDS CAA 72 bp GAGCCCTCTCCCAGCTCAAACAGCACCGGCAGGTCGTaGCTCCCGGTGTCCACGGAGCCGGGGTCCAGCAGG +
Preference number: 6 (lower is better)
Translates to: EPSPSSNSTGRS*LPVSTEPGSSR
Trigger: CCTGCTGGACCCCGGCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGCTGTTTGAGCTGGGAGAGGGCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528838.6
ENST00000532338.5
ENST00000614796.1
ENST00000643099.1
ENST00000643217.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS GCA 72 bp AGCCCTCTCCCAGCTCAAACAGCACCGGCAGGTCGTTaGTCCCGGTGTCCACGGAGCCGGGGTCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SPLPAQTAPAGR*SRCPRSRGPAG
Trigger: TCCTGCTGGACCCCGGCTCCGTGGACACCGGGAGCAACGACCTGCCGGTGCTGTTTGAGCTGGGAGAGGGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528838.6
ENST00000532338.5
ENST00000614796.1
ENST00000643099.1
ENST00000643217.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS CCA 72 bp CCCCTCAGAGCCCATGCCTGGGTGGCCGAGTGGCCTTaGTCTAAGGGAGACCCTGTGTCCCCACAGGGCTCC +
Preference number: 6 (lower is better)
Translates to: PLRAHAWVAEWP*SKGDPVSPQGS
Trigger: GGAGCCCTGTGGGGACACAGGGTCTCCCTTAGACCAAGGCCACTCGGCCACCCAGGCATGGGCTCTGAGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528199.5
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
CDS GCA 72 bp GGCCTCCTCCATGACGTGGGGGTCAAGAGCGCCTGCTaGACGGAGCCGAGGAAGCCGTACTGGCATTGGGGT +
Preference number: 6 (lower is better)
Translates to: GLLHDVGVKSAC*TEPRKPYWHWG
Trigger: ACCCCAATGCCAGTACGGCTTCCTCGGCTCCGTGCAGCAGGCGCTCTTGACCCCCACGTCATGGAGGAGGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS GCA 72 bp TCAGGCTGCGACACTGGCTGTCCCATGTCCTGTAGGTaGTCAGGGCCCTCGCCAGGCCTGGAGGTGGCTCAG +
Preference number: 6 (lower is better)
Translates to: SGCDTGCPMSCR*SGPSPGLEVAQ
Trigger: CTGAGCCACCTCCAGGCCTGGCGAGGGCCCTGAGCACCTACAGGACATGGGACAGCCAGTGTCGCAGCCTGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS GCA 72 bp CATTCCTGGCCCGGGATAAGGCGGTACCTGAACCAGTaGCCCAGGCCCCACACCCCAATGCCCTCCTGTGGG +
Preference number: 6 (lower is better)
Translates to: HSWPGIRRYLNQ*PRPHTPMPSCG
Trigger: CCCACAGGAGGGCATTGGGGTGTGGGGCCTGGGGCACTGGTTCAGGTACCGCCTTATCCCGGGCCAGGAATG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS CCA 72 bp GCCTGCTGCACGGAGCCGAGGAAGCCGTACTGGCATTaGGGTTCCCGCATGCCTGGAGCCCCAAAGTGGACG +
Preference number: 6 (lower is better)
Translates to: ACCTEPRKPYWH*GSRMPGAPKWT
Trigger: CGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTACGGCTTCCTCGGCTCCGTGCAGCAGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp GCAGGAGAGTCTGAGGCCAAGGCCTCCTCCATGACGTaGGGGTCAAGAGCGCCTGCTGCACGGAGCCGAGGA +
Preference number: 6 (lower is better)
Translates to: AGESEAKASSMT*GSRAPAARSRG
Trigger: TCCTCGGCTCCGTGCAGCAGGCGCTCTTGACCCCCACGTCATGGAGGAGGCCTTGGCCTCAGACTCTCCTGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp GCCGGGGACACCTGGTGTCACGTAGGGTGTTGGGGATaGATCCATGCGAGCCAGGTGCACCCGGATCCTGGC +
Preference number: 6 (lower is better)
Translates to: AGDTWCHVGCWG*IHASQVHPDPG
Trigger: GCCAGGATCCGGGTGCACCTGGCTCGCATGGATCCATCCCCAACACCCTACGTGACACCAGGTGTCCCCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CAA 72 bp CGCCTGCTGCACGGAGCCGAGGAAGCCGTACTGGCATaGGGGTTCCCGCATGCCTGGAGCCCCAAAGTGGAC +
Preference number: 6 (lower is better)
Translates to: RLLHGAEEAVLA*GFPHAWSPKVD
Trigger: GTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTACGGCTTCCTCGGCTCCGTGCAGCAGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CAA 72 bp GCCCGAGGCGGGTGGGACGGGTCTGCTGTGCAAGGCTaGTCCTCAAAAGTAGGCTGGTGGGTCCCGCCAAGC +
Preference number: 6 (lower is better)
Translates to: ARGGWDGSAVQG*SSKVGWWVPPS
Trigger: GCTTGGCGGGACCCACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGACCCGTCCCACCCGCCTCGGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS TCA 72 bp TGGGGTTCCCGCATGCCTGGAGCCCCAAAGTGGACGTaGGACCTGAGCTGGCCTTCCGAGGTGGGCTTGCCT +
Preference number: 6 (lower is better)
Translates to: WGSRMPGAPKWT*DLSWPSEVGLP
Trigger: AGGCAAGCCCACCTCGGAAGGCCAGCTCAGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS TCA 72 bp GCCAGGAGCAGACCCTTGGGCCGCCCTTCCAAGGCCTaGGCAGCCAGGTTAAGGGAGGACGGTTCTTCAGGC +
Preference number: 6 (lower is better)
Translates to: ARSRPLGRPSKA*AARLREDGSSG
Trigger: GCCTGAAGAACCGTCCTCCCTTAACCTGGCTGCTCAGGCCTTGGAAGGGCGGCCCAAGGGTCTGCTCCTGGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS GCA 72 bp CAAGGCCTCCTCCATGACGTGGGGGTCAAGAGCGCCTaGTGCACGGAGCCGAGGAAGCCGTACTGGCATTGG +
Preference number: 6 (lower is better)
Translates to: QGLLHDVGVKSA*CTEPRKPYWHW
Trigger: CCAATGCCAGTACGGCTTCCTCGGCTCCGTGCAGCAGGCGCTCTTGACCCCCACGTCATGGAGGAGGCCTTG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS GCA 72 bp GGCTGGCCACCTCCCGCCACAGAGCCTCATTCTCACTaGAACAGACCAGGCTGGGTCAGTGGGGCCCAATCC +
Preference number: 6 (lower is better)
Translates to: GWPPPATEPHSH*NRPGWVSGAQS
Trigger: GGATTGGGCCCCACTGACCCAGCCTGGTCTGTTGCAGTGAGAATGAGGCTCTGTGGCGGGAGGTGGCCAGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000527328.5
ENST00000531447.2
ENST00000532338.5
ENST00000642697.1
ENST00000644444.1
ENST00000644450.1
CDS GCA 72 bp GGTCTAAGGGAGACCCTGTGTCCCCACAGGGCTCCCTaGGCCCGACACACGTGGAGTACAGCTCCGGCTTCA +
Preference number: 6 (lower is better)
Translates to: GLRETLCPHRAP*ARHTWSTAPAS
Trigger: TGAAGCCGGAGCTGTACTCCACGTGTGTCGGGCGCAGGGAGCCCTGTGGGGACACAGGGTCTCCCTTAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528199.5
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
CDS GCA 72 bp GGTCTGACCCCAGGCCCGAGGCGGGTGGGACGGGTCTaGTGTGCAAGGCTTGTCCTCAAAAGTAGGCTGGTG +
Preference number: 6 (lower is better)
Translates to: GLTPGPRRVGRV*CARLVLKSRLV
Trigger: CACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGACCCGTCCCACCCGCCTCGGGCCTGGGGTCAGACC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 72 bp AAGAGCGCCTGCTGCACGGAGCCGAGGAAGCCGTACTaGCATTGGGGTTCCCGCATGCCTGGAGCCCCAAAG +
Preference number: 6 (lower is better)
Translates to: KSACCTEPRKPY*HWGSRMPGAPK
Trigger: CTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTACGGCTTCCTCGGCTCCGTGCAGCAGGCGCTCTT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp CTGTGTCCCCACAGGGCTCCCTGCGCCCGACACACGTaGAGTACAGCTCCGGCTTCACGGTTCTTCCATGGG +
Preference number: 6 (lower is better)
Translates to: LCPHRAPCARHT*STAPASRFFHG
Trigger: CCCATGGAAGAACCGTGAAGCCGGAGCTGTACTCCACGTGTGTCGGGCGCAGGGAGCCCTGTGGGGACACAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528199.5
ENST00000532338.5
ENST00000643870.1
ENST00000644444.1
CDS CCA 72 bp CCCTTTGCCATGAGGGCCTGGGGGCCTTGGTGGCAGTaGACCCAGGAGACAAGGGGCGTATTCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: PFAMRAWGPWWQ*TQETRGVFSSS
Trigger: GCTGGAGCTGAATACGCCCCTTGTCTCCTGGGTCCACTGCCACCAAGGCCCCCAGGCCCTCATGGCAAAGGG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS CCA 72 bp CACCCGGGGCCTCTTGGTGGGCGCCAGGACCCGCTGTaGCCCATAATGCTGGTGTGGGACCTACTGCTTCAT +
Preference number: 6 (lower is better)
Translates to: HPGPLGGRQDPL*PIMLVWDLLLH
Trigger: ATGAAGCAGTAGGTCCCACACCAGCATTATGGGCCACAGCGGGTCCTGGCGCCCACCAAGAGGCCCCGGGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS CCA 72 bp AGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTaGAAGCTGTTCCCGCAGCCGCAGGCGGTGGCTCTG +
Preference number: 6 (lower is better)
Translates to: STSLANWPWSNT*KLFPQPQAVAL
Trigger: CAGAGCCACCGCCTGCGGCTGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533240.5
ENST00000643086.1
CDS CAA 90 bp GGTCAAGAGCGCCTGCTGCACGGAGCCGAGGAAGCCGTACTGGCATaGGGGTTCCCGCATGCCTGGAGCCCCAAAGTGGACGTGAGACCT +
Preference number: 6 (lower is better)
Translates to: GQERLLHGAEEAVLA*GFPHAWSPKVDVRP
Trigger: AGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTACGGCTTCCTCGGCTCCGTGCAGCAGGCGCTCTTGACC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS TCA 72 bp CCCGCATGCCTGGAGCCCCAAAGTGGACGTGAGACCTaGGCTGGCCTTCCGAGGTGGGCTTGCCTCAGTTTC +
Preference number: 6 (lower is better)
Translates to: PACLEPQSGRET*AGLPRWACLSF
Trigger: GAAACTGAGGCAAGCCCACCTCGGAAGGCCAGCTCAGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 72 bp GAGGAAGCCGTACTGGCATTGGGGTTCCCGCATGCCTaGAGCCCCAAAGTGGACGTGAGACCTGAGCTGGCC +
Preference number: 6 (lower is better)
Translates to: EEAVLALGFPHA*SPKVDVRPELA
Trigger: GGCCAGCTCAGGTCTCACGTCCACTTTGGGGCTCCAGGCATGCGGGAACCCCAATGCCAGTACGGCTTCCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp GCCACAGAGCCTCATTCTCACTGCAACAGACCAGGCTaGGTCAGTGGGGCCCAATCCCATGAGCCCCAGGGC +
Preference number: 6 (lower is better)
Translates to: ATEPHSHCNRPG*VSGAQSHEPQG
Trigger: GCCCTGGGGCTCATGGGATTGGGCCCCACTGACCCAGCCTGGTCTGTTGCAGTGAGAATGAGGCTCTGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000527328.5
ENST00000531447.2
ENST00000532338.5
ENST00000642697.1
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp GGGCGCCAGGACCCGCTGTGGCCCATAATGCTGGTGTaGGACCTACTGCTTCATGGCCAGGAGCTTGGAGTC +
Preference number: 6 (lower is better)
Translates to: GRQDPLWPIMLV*DLLLHGQELGV
Trigger: GACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCCCACACCAGCATTATGGGCCACAGCGGGTCCTGGCGCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS CCA 72 bp CCCTGCCTGACAGGAAGTGCAGTCAGCACCGCAGTCTaGATCCTGCCAACACCAGAGGCCGTGCCAGAGCAG +
Preference number: 6 (lower is better)
Translates to: PCLTGSAVSTAV*ILPTPEAVPEQ
Trigger: CTGCTCTGGCACGGCCTCTGGTGTTGGCAGGATCCAGACTGCGGTGCTGACTGCACTTCCTGTCAGGCAGGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000614796.1
ENST00000643099.1
CDS TCA 72 bp AGGAGCTCTTGGATCTGTGGGGTGGAGACGGTATTGTaGGCACTCCCGCTGGTCTCGTTCCCCCTCACCCCC +
Preference number: 6 (lower is better)
Translates to: RSSWICGVETVL*ALPLVSFPLTP
Trigger: GGGGGTGAGGGGGAACGAGACCAGCGGGAGTGCTCACAATACCGTCTCCACCCCACAGATCCAAGAGCTCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000528842.1
ENST00000644450.1
ENST00000646061.1
CDS GCA 72 bp TCTGGCCCTGCCCCCACCTTGTTGACGACTTTCTGTTaGTGGGCATGCTTCTGCCGAAGGCTGGCCACCTCC +
Preference number: 6 (lower is better)
Translates to: SGPAPTLLTTFC*WACFCRRLATS
Trigger: GGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAACAAGGTGGGGGCAGGGCCAGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533130.1
ENST00000646233.1
CDS CCA 72 bp AGCACCTCCTTGGCAAACTGGCCCTGGTCGAACACGTaGAAGCTGTTCCCGCTCGGGCTCCAGCAGATGAGC +
Preference number: 6 (lower is better)
Translates to: STSLANWPWSNT*KLFPLGLQQMS
Trigger: GCTCATCTGCTGGAGCCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS CCA 72 bp GTCCACGTGGCCGGACTCCAGGAATCACAAAGCCGGTaGCTCCTGCTAGACCCCATGCAGGAGAGTCTGAGG +
Preference number: 6 (lower is better)
Translates to: VHVAGLQESQSR*LLLDPMQESLR
Trigger: CCTCAGACTCTCCTGCATGGGGTCTAGCAGGAGCCACCGGCTTTGTGATTCCTGGAGTCCGGCCACGTGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000527328.5
ENST00000532338.5
ENST00000644444.1
ENST00000644450.1
CDS CCA 72 bp GGGTCTGCTGTGCAAGGCTTGTCCTCAAAAGTAGGCTaGTGGGTCCCGCCAAGCTCGGAGCCAGGCAGAAGC +
Preference number: 6 (lower is better)
Translates to: GSAVQGLSSKVG*WVPPSSEPGRS
Trigger: GCTTCTGCCTGGCTCCGAGCTTGGCGGGACCCACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CAA 72 bp CTCTGGCCCTGCCCCCACCTTGTTGACGACTTTCTGTaGCTGGGCATGCTTCTGCCGAAGGCTGGCCACCTC +
Preference number: 6 (lower is better)
Translates to: LWPCPHLVDDFL*LGMLLPKAGHL
Trigger: GAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAACAAGGTGGGGGCAGGGCCAGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000533130.1
ENST00000646233.1
CDS CCA 72 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTGTTCCCGCTCGGGCTC +
Preference number: 6 (lower is better)
Translates to: KYLGSTSLANWP*SNTWKLFPLGL
Trigger: GAGCCCGAGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000400780.8
ENST00000528838.6
ENST00000643217.1
ENST00000646252.2
CDS CCA 72 bp AAGTACTTGGGCAGCACCTCCTTGGCAAACTGGCCCTaGTCGAACACGTGGAAGCTGTTCCCGCAGCCGCAG +
Preference number: 6 (lower is better)
Translates to: KYLGSTSLANWP*SNTWKLFPQPQ
Trigger: CTGCGGCTGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533240.5
ENST00000643086.1
CDS CCA 72 bp CACGTGGAGTACAGCTCCGGCTTCACGGTTCTTCCATaGGGACCCCAGGTTCATACCCACAAGGACCCTCCC +
Preference number: 6 (lower is better)
Translates to: HVEYSSGFTVLP*GPQVHTHKDPP
Trigger: GGGAGGGTCCTTGTGGGTATGAACCTGGGGTCCCCATGGAAGAACCGTGAAGCCGGAGCTGTACTCCACGTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS GCA 72 bp AGCTTGTTGACGACTTTCTGTTGCTGGGCATGCTTCTaGCGAAGGCTGGCCACCTCCCGCCACAGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: SLLTTFCCWACF*RRLATSRHRAS
Trigger: TGAGGCTCTGTGGCGGGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAACAAGCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528199.5
ENST00000528838.6
ENST00000531447.2
ENST00000532338.5
ENST00000533240.5
ENST00000642697.1
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS GCA 72 bp GGACCTACTGCTTCATGGCCAGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCATCAGCTGCACGTCCG +
Preference number: 6 (lower is better)
Translates to: GPTASWPGAWSP*TPASPSSAARP
Trigger: CGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS GCA 72 bp ACCTTGTTGACGACTTTCTGTTGCTGGGCATGCTTCTaGCGAAGGCTGGCCACCTCCCGCCACAGAGCCTCA +
Preference number: 6 (lower is better)
Translates to: TLLTTFCCWACF*RRLATSRHRAS
Trigger: TGAGGCTCTGTGGCGGGAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAACAAGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533130.1
ENST00000646233.1
CDS CCA 72 bp TCTGCTGTGCAAGGCTTGTCCTCAAAAGTAGGCTGGTaGGTCCCGCCAAGCTCGGAGCCAGGCAGAAGCCAA +
Preference number: 6 (lower is better)
Translates to: SAVQGLSSKVGW*VPPSSEPGRSQ
Trigger: TTGGCTTCTGCCTGGCTCCGAGCTTGGCGGGACCCACCAGCCTACTTTTGAGGACAAGCCTTGCACAGCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000532338.5
ENST00000644444.1
CDS CCA 72 bp GTGGCCCATAATGCTGGTGTGGGACCTACTGCTTCATaGCCAGGAGCTTGGAGTCCATGCACTCCTGCTTCC +
Preference number: 6 (lower is better)
Translates to: VAHNAGVGPTAS*PGAWSPCTPAS
Trigger: GGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCAGTAGGTCCCACACCAGCATTATGGGCCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000529630.1
ENST00000532338.5
ENST00000644444.1
ENST00000646807.1
CDS CCA 72 bp TGCTTGAAGTACTTGGGCAGCACCTCCTTGGCAAACTaGCCCTGGTCGAACACGTGGAAGCTGTTCCCGCAG +
Preference number: 6 (lower is better)
Translates to: CLKYLGSTSLAN*PWSNTWKLFPQ
Trigger: CTGCGGGAACAGCTTCCACGTGTTCGACCAGGGCCAGTTTGCCAAGGAGGTGCTGCCCAAGTACTTCAAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533240.5
ENST00000643086.1
CDS GCA 72 bp CATTCTCATGCTTCATGGCCAGGAGCTTGGAGTCCATaGACTCCTGCTTCCCCTTCATCAGCTGCACGTCCG +
Preference number: 6 (lower is better)
Translates to: HSHASWPGAWSP*TPASPSSAARP
Trigger: CGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCATGGACTCCAAGCTCCTGGCCATGAAGCATGAGAATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000533240.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000646252.2
CDS CCA 72 bp AGCTGCACGTCCGTCAGCAGCTTGGTGACGCTGTCCTaGCGGATCTTTATGTCTTCACTCTTCAGGGTGGAC +
Preference number: 6 (lower is better)
Translates to: SCTSVSSLVTLS*RIFMSSLFRVD
Trigger: GTCCACCCTGAAGAGTGAAGACATAAAGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGTGCAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS CAA 90 bp ATGCACTCCTGCTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGGATCTTTATGTCTTCACTCTTCAGG +
Preference number: 6 (lower is better)
Translates to: MHSCFPFISCTSVSS*VTLSWRIFMSSLFR
Trigger: CCTGAAGAGTGAAGACATAAAGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCAGGAGTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS TCA 72 bp CACTCTTCAGGGTGGACACACTGGTCACTTTCCTCTTaGTGTTCTCAAGGAGCTGCTCCTGGCCACGCAGGA +
Preference number: 6 (lower is better)
Translates to: HSSGWTHWSLSS*CSQGAAPGHAG
Trigger: TCCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGTGTCCACCCTGAAGAGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS TCA 72 bp TCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTTGGTaGCGCTGTCCTGGCGGATCTTTATGTCTTCACTCT +
Preference number: 6 (lower is better)
Translates to: SPSSAARPSAAW*RCPGGSLCLHS
Trigger: AGAGTGAAGACATAAAGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS CCA 72 bp TGCAGGTTATCCAGGTTGGAGTCCATAGCATCCAAGTaGTCACTGAGCTCATTCCTGGCCCGGGATAAGGCG +
Preference number: 6 (lower is better)
Translates to: CRLSRLESIASK*SLSSFLARDKA
Trigger: CGCCTTATCCCGGGCCAGGAATGAGCTCAGTGACCACTTGGATGCTATGGACTCCAACCTGGATAACCTGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS CAA 72 bp TCACTCTTCAGGGTGGACACACTGGTCACTTTCCTCTaGATGTTCTCAAGGAGCTGCTCCTGGCCACGCAGG +
Preference number: 6 (lower is better)
Translates to: SLFRVDTLVTFL*MFSRSCSWPRR
Trigger: CCTGCGTGGCCAGGAGCAGCTCCTTGAGAACATCAAGAGGAAAGTGACCAGTGTGTCCACCCTGAAGAGTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS CAA 72 bp TGCTTCCCCTTCATCAGCTGCACGTCCGTCAGCAGCTaGGTGACGCTGTCCTGGCGGATCTTTATGTCTTCA +
Preference number: 6 (lower is better)
Translates to: CFPFISCTSVSS*VTLSWRIFMSS
Trigger: TGAAGACATAAAGATCCGCCAGGACAGCGTCACCAAGCTGCTGACGGACGTGCAGCTGATGAAGGGGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000528199.5
ENST00000528838.6
ENST00000529630.1
ENST00000532338.5
ENST00000533240.5
ENST00000534314.5
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000643951.1
ENST00000644444.1
ENST00000646252.2
ENST00000646807.1
CDS CAA 90 bp CGTATTCAGCTCCAGCACAAGGATCAGGGATTTCAGTGTTCAGGGTaGGTGAGGTTTCCCGTTGCACTGGGAAAACAGGTGGGGCTCTGC +
Preference number: 6 (lower is better)
Translates to: RIQLQHKDQGFQCSG*VRFPVALGKQVGLC
Trigger: GCAGAGCCCCACCTGTTTTCCCAGTGCAACGGGAAACCTCACCAACCCTGAACACTGAAATCCCTGATCCTTGTGCTGGAGCTGAATACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1
CDS GCA 72 bp ACTGATTTACTTCTGCAAACCGGAGCTGTCCGGTCTTaGAGGGTCGGACCATGTAAACAAGCCTGCTGCCAG +
Preference number: 6 (lower is better)
Translates to: TDLLLQTGAVRS*RVGPCKQACCQ
Trigger: CTGGCAGCAGGCTTGTTTACATGGTCCGACCCTGCAAGACCGGACAGCTCCGGTTTGCAGAAGTAAATCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000528988.1
ENST00000642717.1
CDS CAA 72 bp GATCAGGAACTGAATGAGCTTGTTGACGACTTTCTGTaGCTGGGCATGCTTCTGCCGAAGGCTGGCCACCTC +
Preference number: 6 (lower is better)
Translates to: DQELNELVDDFL*LGMLLPKAGHL
Trigger: GAGGTGGCCAGCCTTCGGCAGAAGCATGCCCAGCAACAGAAAGTCGTCAACAAGCTCATTCAGTTCCTGATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 14 transcripts:
ENST00000400780.8
ENST00000527328.5
ENST00000528199.5
ENST00000528838.6
ENST00000531447.2
ENST00000532338.5
ENST00000533240.5
ENST00000642697.1
ENST00000643086.1
ENST00000643217.1
ENST00000643870.1
ENST00000644444.1
ENST00000644450.1
ENST00000646252.2
CDS TCA 72 bp AGGATCCGGTTTGACTGCACCAGTGAGATCAGGAACTaGATGAGCTGTGGAGAGAGAGGACACAGTTACCCC +
Preference number: 6 (lower is better)
Translates to: RIRFDCTSEIRN*MSCGERGHSYP
Trigger: GGGGTAACTGTGTCCTCTCTCTCCACAGCTCATTCAGTTCCTGATCTCACTGGTGCAGTCAAACCGGATCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000533130.1
ENST00000646233.1
CDS CAA 72 bp CTCCAGCACAAGGATCAGGGATTTCAGTGTTCAGGGTaGGTGAGGTTTCCCGTTGCACTGGGAAAACAGGTG +
Preference number: 6 (lower is better)
Translates to: LQHKDQGFQCSG*VRFPVALGKQV
Trigger: CACCTGTTTTCCCAGTGCAACGGGAAACCTCACCAACCCTGAACACTGAAATCCCTGATCCTTGTGCTGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000528842.1
ENST00000614796.1
ENST00000643099.1
ENST00000646061.1