Pregenerated sensors for HSD17B7 (Homo sapiens)

Ensembl gene IDs: ENSG00000132196

Ensembl transcript IDs: ENST00000485405.5, ENST00000649629.1

Found 7 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CAGTACTCCTCAAAACTGTCAAGGTCATCAAAAACAAGGAAAGTCTaGGAAGCTGTCACAACCAAGAAGAGCCTAAGGAGACATGACTGC	+
Preference number: 5 (lower is better) Translates to: QYSSKLSRSSKTRKV*EAVTTKKSLRRHDC Trigger: GCAGTCATGTCTCCTTAGGCTCTTCTTGGTTGTGACAGCTTCTCAGACTTTCCTTGTTTTTGATGACCTTGACAGTTTTGAGGAGTACTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000485405.5 ENST00000649629.1
CDS GCA 90 bp	TGTAGCAGAATTGATTCATCTATTTTGACAAATGCATCATACCAATaGGAAATGTTAATAATGGGGAAACTGGGTGTAGGGCATACAGAA	+
Preference number: 5 (lower is better) Translates to: CSRIDSSILTNASYQ*EMLIMGKLGVGHTE Trigger: TTCTGTATGCCCTACACCCAGTTTCCCCATTATTAACATTTCGCATTGGTATGATGCATTTGTCAAAATAGATGAATCAATTCTGCTACA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000485405.5 ENST00000649629.1
CDS TCA 72 bp	CTCTTAGTCTATCAGCAGAGAGGGTTTAGAAGACACTaGTATCTCAGCAGCAATAAGCACCCAGATCTTGGT	+
Preference number: 6 (lower is better) Translates to: LLVYQQRGFRRH*YLSSNKHPDLG Trigger: ACCAAGATCTGGGTGCTTATTGCTGCTGAGATATCAGTGTCTTCTAAACCCTCTCTGCTGATAGACTAAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000649629.1
CDS CAA 72 bp	AGTCTCACCATGAGAAAAACATCAGACAAATCCCGATaGAGAGAGTCTACAAAACACCTAAGCAGTACTCCT	+
Preference number: 6 (lower is better) Translates to: SLTMRKTSDKSR*RESTKHLSSTP Trigger: AGGAGTACTGCTTAGGTGTTTTGTAGACTCTCTCAATCGGGATTTGTCTGATGTTTTTCTCATGGTGAGACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000485405.5 ENST00000649629.1
CDS TCA 72 bp	TCAACACTGAGAAGTCATACTGATAGCATACACCCTTaGTATGATGTCATGAGAATGTCACTTTACCTCTGT	+
Preference number: 6 (lower is better) Translates to: STLRSHTDSIHP*YDVMRMSLYLC Trigger: ACAGAGGTAAAGTGACATTCTCATGACATCATATCAAGGGTGTATGCTATCAGTATGACTTCTCAGTGTTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000485405.5 ENST00000649629.1
CDS CAA 72 bp	GACACTGATATCTCAGCAGCAATAAGCACCCAGATCTaGGTTTCTAATAACCATTCTCTGATAAAAGAAAAC	+
Preference number: 6 (lower is better) Translates to: DTDISAAISTQI*VSNNHSLIKEN Trigger: GTTTTCTTTTATCAGAGAATGGTTATTAGAAACCAAGATCTGGGTGCTTATTGCTGCTGAGATATCAGTGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000649629.1
CDS GCA 72 bp	ATTGATTCATCTATTTTGACAAATGCATCATACCAATaGGAAATGTTAATAATGGGGAAACTGGGTGTAGGG	+
Preference number: 6 (lower is better) Translates to: IDSSILTNASYQ*EMLIMGKLGVG Trigger: CCCTACACCCAGTTTCCCCATTATTAACATTTCGCATTGGTATGATGCATTTGTCAAAATAGATGAATCAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000485405.5 ENST00000649629.1

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