RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSD17B3 (Homo sapiens)

Ensembl gene IDs: ENSG00000130948

Ensembl transcript IDs: ENST00000375262.4, ENST00000375263.8, ENST00000467499.6, ENST00000484816.2, ENST00000648146.1, ENST00000648332.1, ENST00000648799.1, ENST00000650005.1, ENST00000650386.1

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp GTGCTGGTCTGCTCCTCTGGTCCTCTTCAGCCAGCATGGGACTGGTaGGGAAAAGGTTGTGCTGGACTCCTCACCGCCTGGCTACCTGAC +
Preference number: 1 (lower is better)
Translates to: VLVCSSGPLQPAWDW*GKGCAGLLTAWLPD
Trigger: GTCAGGTAGCCAGGCGGTGAGGAGTCCAGCACAACCTTTTCCTCACCAGTCCCATGCTGGCTGAAGAGGACCAGAGGAGCAGACCAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTaGTCTGCTCCTCTGGTCCTCTTCAGCCAGCATGGGACTGGTGAG +
Preference number: 1 (lower is better)
Translates to: CDPSPLHLQRTRLKC*SAPLVLFSQHGTGE
Trigger: CTCACCAGTCCCATGCTGGCTGAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR TCA 90 bp CCCACACAGGAGATGTGTGGTCCAGAGAGGAGTTCAGGAGTTTGGTaGGGATGTGCAGCAGCGCCCAAGCAGTCTGGCATTATCACCCGG +
Preference number: 1 (lower is better)
Translates to: PTQEMCGPERSSGVW*GCAAAPKQSGIITR
Trigger: CCGGGTGATAATGCCAGACTGCTTGGGCGCTGCTGCACATCCTCACCAAACTCCTGAACTCCTCTCTGGACCACACATCTCCTGTGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR TCA 90 bp GTAGAGGTTCTGGGCTATGGAGGGCAGGTAAAGAAACCACTAGAATaGCCAAAGATAAAGAGAAAGGACAAGAGGACGGACACAGACACT +
Preference number: 1 (lower is better)
Translates to: VEVLGYGGQVKKPLE*PKIKRKDKRTDTDT
Trigger: AGTGTCTGTGTCCGTCCTCTTGTCCTTTCTCTTTATCTTTGGTCATTCTAGTGGTTTCTTTACCTGCCCTCCATAGCCCAGAACCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CCA 90 bp TTACAATGGATGAGGCTCTGGATTTCATCCGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGAAGCATTCCGACATTGTTGACTAAA +
Preference number: 1 (lower is better)
Translates to: LQWMRLWISSGAFRK*LGRRFGSIPTLLTK
Trigger: TTTAGTCAACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGAGCCTCATCCATTGTAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR TCA 90 bp GGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGACATAATTCAATaGCTCTTTGACAAACTCATCAGCAGTCTTGGTTATCACATTTGT +
Preference number: 1 (lower is better)
Translates to: GKAATGFTSNCDIIQ*LFDKLISSLGYHIC
Trigger: ACAAATGTGATAACCAAGACTGCTGATGAGTTTGTCAAAGAGTCATTGAATTATGTCACAATTGGAGGTGAAACCTGTGGCTGCCTTGCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
3UTR CCA 90 bp TCTCAACTAAGTGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTaGATGGGCACAATTCTCCTGAGTTGCCAAATTTCAAGTTACTAC +
Preference number: 1 (lower is better)
Translates to: SQLSVVRFQRILLLQ*MGTILLSCQISSYY
Trigger: GTAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACACTTAGTTGAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR GCA 90 bp CAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCTGAGTTaGCAAATTTCAAGTTACTACATGTTAATGCATTTCGCACATATA +
Preference number: 1 (lower is better)
Translates to: QRILLLQWMGTILLS*QISSYYMLMHFAHI
Trigger: TATATGTGCGAAATGCATTAACATGTAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR TCA 90 bp TTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCCAGCATGGGACTGGTaGGGAAAAGGTTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: LEGTAVEGPGRDQAQKARPAWDW*GKGCAG
Trigger: TCCAGCACAACCTTTTCCTCACCAGTCCCATGCTGG...GCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CCA 90 bp GGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTCATATGCTGGATCTGTaGCATGCTGGAGCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: GRHRCRRPRPGSGSESPPHMLDL*HAGAGL
Trigger: CAAGCCAGCTCCAGCATGCCACAGATCCAGCATATG...AGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
3UTR CAA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: GVELQVCHIVCQEQP*EGTAVEGPGRDQAQ
Trigger: CTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
3UTR-3UTR TCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGCCAGCATGGGACTGGTaGGGAAAAGGTTGTGCTGGA +
Preference number: 2 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLPAWDW*GKGCAG
Trigger: TCCAGCACAACCTTTTCCTCACCAGTCCCATGCTGG...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR-3UTR GCA 90 bp GGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGG +
Preference number: 2 (lower is better)
Translates to: GTAVEGPGRDQAQKARQDLDFIR*VQEMAW
Trigger: CCAAGCCATTTCCTGAACGCACCGGATGAAATCCAG...ATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR GCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTGTTGAAGTGCTGGTCTaGTCCTCTGGTCCTCTTCAG +
Preference number: 2 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAVEVLV*SSGPLQ
Trigger: CTGAAGAGGACCAGAGGAGCAGACCAGCACTTCAAC...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR-3UTR CCA 90 bp GCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGACTAGGTTGAAGTGCTaGTCTGCTCCTCTGGTCCTC +
Preference number: 2 (lower is better)
Translates to: AVEGPGRDQAQKARQDFMTRLKC*SAPLVL
Trigger: GAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGT...CATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR CAA 90 bp AGAGCCCACACAGGAGATGTGTGGTCCAGAGAGGAGTTCAGGAGTTaGGTGAGGATGTGCAGCAGCGCCCAAGCAGTCTGGCATTATCAC +
Preference number: 2 (lower is better)
Translates to: RAHTGDVWSREEFRS*VRMCSSAQAVWHYH
Trigger: GTGATAATGCCAGACTGCTTGGGCGCTGCTGCACATCCTCACCAAACTCCTGAACTCCTCTCTGGACCACACATCTCCTGTGTGGGCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR TCA 90 bp CCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGGAAACAGGGCTATCCCAGTTCAGCGGACTAGGTTaGAGTGCTGGTCTGCTCCTC +
Preference number: 2 (lower is better)
Translates to: PWKLSTWSREAKETGLSQFSGLG*SAGLLL
Trigger: GAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAA...CTGGGATAGCCCTGTTTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR GCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTAAAATGTGTATTCTATaGCTCTGTGACCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAKMCIL*LCDPSP
Trigger: GGGGCTGGGGTCACAGAGGCATAGAATACACATTTT...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR-3UTR GCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTGGTAAGAGCCTCTTCTaGCATATGCTGGATCTGTGG +
Preference number: 2 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVGKSLF*HMLDLW
Trigger: CCACAGATCCAGCATATGGCAGAAGAGGCTCTTACC...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
3UTR-3UTR CCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTCTTCTGCCATATGCTaGATCTGTGGCATGCTGGAG +
Preference number: 2 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVSSAIC*ICGMLE
Trigger: CTCCAGCATGCCACAGATCCAGCATATGGCAGAAGA...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
3UTR-3UTR CCA 90 bp CCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGGAAACAGGGCTATCCCAGCAATGGATGAGGCTCTaGATTTCATCCGGTGCGTTC +
Preference number: 2 (lower is better)
Translates to: PWKLSTWSREAKETGLSQQWMRL*ISSGAF
Trigger: GAACGCACCGGATGAAATCCAGAGCCTCATCCATTG...CTGGGATAGCCCTGTTTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR GCA 90 bp TTATATTCCTCTTGCAGGGCCTTGGAAAATGCGCACACAAACGCCTTGGAAGCTCGGACTAGGTTGAAGTaGTGGTCTGCTCCTCTGGTC +
Preference number: 2 (lower is better)
Translates to: LYSSCRALENAHTNALEARTRLK*WSAPLV
Trigger: GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCG...AGCTTCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGAATATAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CCA 90 bp TCTCAGCTGGAGGAAGAGGGGTTAGCCTATGTGAGTCCAGGAGAACAGAAAGACGCAGAGGAGCAACCCTaGAACTTGCTTCTTGAAGAG +
Preference number: 2 (lower is better)
Translates to: SQLEEEGLAYVSPGEQKDAEEQP*NLLLEE
Trigger: CTCTTCAAGAAGCAAGTTCCAGGGTTGCTCCTCTGC...GTCTTTCTGTTCTCCTGGACTCACATAGGCTAACCCCTCTTCCTCCAGCTGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR CCA 90 bp CAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATGCTTGGGAGAAGGTTTaGAAGCATTCCGACATTGTT +
Preference number: 2 (lower is better)
Translates to: QKARQDFMGKAATGFTSNAWEKV*KHSDIV
Trigger: AACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGC...ATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CCA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTGTTCAGGAAATGGCTTaGGAGAAGGTTTGGAAGCAT +
Preference number: 2 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPVQEMA*EKVWKH
Trigger: ATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAAC...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CCA 90 bp TCAGCTGGAGGAAGAGGGGTTAGCCTATGTGAGTCCAGGAGAACAGAAAGACAAAGAGGTTCTGGGCTATaGAGGGCAGGTAAAGAAACC +
Preference number: 2 (lower is better)
Translates to: SAGGRGVSLCESRRTERQRGSGL*RAGKET
Trigger: GGTTTCTTTACCTGCCCTCCATAGCCCAGAACCTCT...TTGTCTTTCTGTTCTCCTGGACTCACATAGGCTAACCCCTCTTCCTCCAGCTGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR CCA 90 bp AAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTTATGGGGTCAGCACCTaGATGATGACTTCTTTTGCT +
Preference number: 2 (lower is better)
Translates to: KARQDFMGKAATGFTSNCYGVST*MMTSFA
Trigger: AGCAAAAGAAGTCATCATCCAGGTGCTGACCCCATA...ACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
3UTR-3UTR TCA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCGAGACCTTTCTGCCTTaGTTCCATATGTTTCAGAAT +
Preference number: 2 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGETFLP*FHMFQN
Trigger: ATTCTGAAACATATGGAATCAAGGCAGAAAGGTCTC...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR TCA 90 bp GTGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCGGTGCTAAAGAACCATaGAGTGGGCAAAAGTGCATG +
Preference number: 2 (lower is better)
Translates to: VWFDFKESCFYSGWAQFSGAKEP*SGQKCM
Trigger: CATGCACTTTTGCCCACTTCATGGTTCTTTAGCACC...GGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR TCA 90 bp AATACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTACTGGAACTTGCTTCTTaGAGAGACGTAGATTTGTGC +
Preference number: 2 (lower is better)
Translates to: NTVFQRELLHSQLEEEGLLELAS*RDVDLC
Trigger: GCACAAATCTACGTCTCTTCAAGAAGCAAGTTCCAG...TAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTATT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR GCA 90 bp GTGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCAGAGACGTAGATTTGTaGCAGAAACAGAGTGTGGGA +
Preference number: 2 (lower is better)
Translates to: VWFDFKESCFYSGWAQFSRDVDL*QKQSVG
Trigger: TCCCACACTCTGTTTCTGGCACAAATCTACGTCTCT...GGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR GCA 90 bp GACTTCTTTTGCTTTATATTCCTCTTGCAGGGCCTTGGAAAATGCGCACACAAAAAAATGTGTATTCTATaGCTCTGTGACCCCAGCCCC +
Preference number: 2 (lower is better)
Translates to: DFFCFIFLLQGLGKCAHKKMCIL*LCDPSP
Trigger: GGGGCTGGGGTCACAGAGGCATAGAATACACATTTT...TTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCAAAAGAAGTC
44% GC, longest homopolymer 7 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR GCA 90 bp AGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATAAGTTTGGTGAGGATGTaGAGCAGCGCCCAAGCAGTC +
Preference number: 2 (lower is better)
Translates to: RHQLRVSWKTRNYIPGGISLVRM*SSAQAV
Trigger: GACTGCTTGGGCGCTGCTGCACATCCTCACCAAACT...TATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR CCA 90 bp AGTTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATATAAATACGGTTTTTAGCGCCCAAGCAGTCTaGCATTATCACCCGGTGCAG +
Preference number: 2 (lower is better)
Translates to: SFLENSELYSWRNINTVFSAQAV*HYHPVQ
Trigger: CTGCACCGGGTGATAATGCCAGACTGCTTGGGCGCT...AAAAACCGTATTTATATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR TCA 90 bp GCACATATATTGATCACATACCTTGACTACGGAGGTGATGTTACAATGGATGAGGCAAAAGTGCATGTCTaGACGGTTTCATCACTCACC +
Preference number: 2 (lower is better)
Translates to: AHILITYLDYGGDVTMDEAKVHV*TVSSLT
Trigger: GGTGAGTGATGAAACCGTTCAGACATGCACTTTTGC...CTCATCCATTGTAACATCACCTCCGTAGTCAAGGTATGTGATCAATATATGTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR CCA 90 bp GTGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCGAGGTGATGTTACAATaGATGAGGCTCTGTAATAAA +
Preference number: 2 (lower is better)
Translates to: VWFDFKESCFYSGWAQFSEVMLQ*MRLCNK
Trigger: TTTATTACAGAGCCTCATCCATTGTAACATCACCTC...GGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CAA 90 bp AAGAAACATCTGACTCCCATTCTGTCATTCTGTACCCACGTCATCTaGACTAGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTAT +
Preference number: 2 (lower is better)
Translates to: KKHLTPILSFCTHVI*TRHQLRVSWKTRNY
Trigger: ATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCTAGTCAAGATGACGTGGGTACAGAATGACAGAATGGGAGTCAGATGTTTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CAA 90 bp TCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCTGAGTaGCCAAATTTCAAGTTACTACATGTTAATGCATTTCGCACATAT +
Preference number: 2 (lower is better)
Translates to: SKNPASTVDGHNSPE*PNFKLLHVNAFRTY
Trigger: ATATGTGCGAAATGCATTAACATGTAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR GCA 90 bp GTCATCTTGACTAGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTAGCAACCCTGGAACTTaGTTCTTGAAGAGACGTAGA +
Preference number: 2 (lower is better)
Translates to: VILTRHQLRVSWKTRNYISNPGT*FLKRRR
Trigger: TCTACGTCTCTTCAAGAAGCAAGTTCCAGGGTTGCT...AATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCTAGTCAAGATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR CCA 90 bp TTCCAGCAAGCATGTACTAGCATCAAGAAACATCTGACTCCCATTCTGTCATTCTCGGAACTATATTCCTaGAGGAATATAAATACGGTT +
Preference number: 2 (lower is better)
Translates to: FQQACTSIKKHLTPILSFSELYS*RNINTV
Trigger: AACCGTATTTATATTCCTCCAGGAATATAGTTCCGA...GAATGACAGAATGGGAGTCAGATGTTTCTTGATGCTAGTACATGCTTGCTGGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CAA 90 bp TGCCAAATTTCAAGTTACTACATGTTAATGCATTTCGCACATATATaGATCACATACCTTGACTACGGAGGTGATGTTACAATGGATGAG +
Preference number: 2 (lower is better)
Translates to: CQISSYYMLMHFAHI*ITYLDYGGDVTMDE
Trigger: CTCATCCATTGTAACATCACCTCCGTAGTCAAGGTATGTGATCAATATATGTGCGAAATGCATTAACATGTAGTAACTTGAAATTTGGCA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CCA 72 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTaGTCTGCTCCTCTGGTCCTCTTCAGCCAGCATGGG +
Preference number: 3 (lower is better)
Translates to: SPLHLQRTRLKC*SAPLVLFSQHG
Trigger: CCCATGCTGGCTGAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR-3UTR CAA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCTGGTGAGGAAAAGGTaGTGCTGGACTCCTCACCGC +
Preference number: 3 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSALVRKR*CWTPHR
Trigger: GCGGTGAGGAGTCCAGCACAACCTTTTCCTCACCAG...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR GCA 72 bp GCCTGGCTACCTGACCTTGGTGTTGAGCTTCAGGTATaGCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGC +
Preference number: 3 (lower is better)
Translates to: AWLPDLGVELQV*HIVCQEQPLEG
Trigger: GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGGTAGCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CAA 90 bp AGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTTCCTCTTGCAGGGCCTaGGAAAATGCGCACACAAAC +
Preference number: 3 (lower is better)
Translates to: RLRKPAKISWARQPQVSPSSCRA*ENAHTN
Trigger: GTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGA...AGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR CCA 72 bp AAAATGCGCACACAAACGCCTTGGAAGCTGAGTACATaGAGTAGAGAGGCCAAGGAAACAGGGCTATCCCAG +
Preference number: 3 (lower is better)
Translates to: KMRTQTPWKLST*SREAKETGLSQ
Trigger: CTGGGATAGCCCTGTTTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CAA 90 bp AAAATGCGCACACAAACGCCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGCGTTCAGGAAATGGCTaGGGAGAAGGTTTGGAAGCA +
Preference number: 3 (lower is better)
Translates to: KMRTQTPWKLSTWSREAKRSGNG*GEGLEA
Trigger: TGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACG...CTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR CCA 72 bp ATGAGGCTCTGGATTTCATCCGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGAAGCATTCCGACATTG +
Preference number: 3 (lower is better)
Translates to: MRLWISSGAFRK*LGRRFGSIPTL
Trigger: CAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGAGCCTCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CAA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTCAGAAAGCCCGCCTTaGTTTCATGTTTGTGTTTGT +
Preference number: 3 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPSESPP*FHVCVC
Trigger: ACAAACACAAACATGAAACAAAGGCGGGCTTTCTGA...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
3UTR GCA 72 bp GATGTTACAATGGATGAGGCTCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGGGAGAAGGTTTGGAAG +
Preference number: 3 (lower is better)
Translates to: DVTMDEALDFIR*VQEMAWEKVWK
Trigger: CTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGAGCCTCATCCATTGTAACATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CAA 90 bp CATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACTTCAGCGGACTAGGTaGAAGTGCTGGTCTGCTCCT +
Preference number: 3 (lower is better)
Translates to: HLYLDTLSLQSRQHMGSALQRTR*KCWSAP
Trigger: AGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAG...TGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR-3UTR CAA 90 bp AAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGGGAAGCATTCCGACATaGTTGACTAAAATTCCAATT +
Preference number: 3 (lower is better)
Translates to: KPAKISWARQPQVSPPIVGSIPT*LTKIPI
Trigger: AATTGGAATTTTAGTCAACAATGTCGGAATGCTTCC...CACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
3UTR TCA 72 bp CCTTCCAGCAAGCATGTACTAGCATCAAGAAACATCTaGCTCCCATTCTGTCATTCTGTACCCACGTCATCT +
Preference number: 3 (lower is better)
Translates to: PSSKHVLASRNI*LPFCHSVPTSS
Trigger: AGATGACGTGGGTACAGAATGACAGAATGGGAGTCAGATGTTTCTTGATGCTAGTACATGCTTGCTGGAAGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CCA 72 bp AGTGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTaGATGGGCACAATTCTCCTGAGTTGCCAAATTTCA +
Preference number: 3 (lower is better)
Translates to: SVVRFQRILLLQ*MGTILLSCQIS
Trigger: TGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR TCA 72 bp AAATTCTCCTGGAAAGTAGTTGGTGCTAAAGAACCATaGAGTGGGCAAAAGTGCATGTCTGAACGGTTTCAT +
Preference number: 3 (lower is better)
Translates to: KFSWKVVGAKEP*SGQKCMSERFH
Trigger: ATGAAACCGTTCAGACATGCACTTTTGCCCACTTCATGGTTCTTTAGCACCAACTACTTTCCAGGAGAATTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR-3UTR CAA 90 bp AGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATACCTGGAACTTGCTTCTaGAAGAGACGTAGATTTGTG +
Preference number: 3 (lower is better)
Translates to: RHQLRVSWKTRNYIPGGIPGTCF*KRRRFV
Trigger: CACAAATCTACGTCTCTTCAAGAAGCAAGTTCCAGG...TATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR TCA 72 bp TCTGTAATAAATAATCACAACCACACATCAGCCGGATaGTTAGAGAAATTCTCCTGGAAAGTAGTTGGTGCT +
Preference number: 3 (lower is better)
Translates to: SVINNHNHTSAG*LEKFSWKVVGA
Trigger: AGCACCAACTACTTTCCAGGAGAATTTCTCTAATCATCCGGCTGATGTGTGGTTGTGATTATTTATTACAGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CCA 72 bp ATTAAGAGTTTCCTGGAAAACTCGGAACTATATTCCTaGAGGAATATAAATACGGTTTTTCAAAGGGAGCTA +
Preference number: 3 (lower is better)
Translates to: IKSFLENSELYS*RNINTVFQREL
Trigger: TAGCTCCCTTTGAAAAACCGTATTTATATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACTCTTAAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp GGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTGGATCTGTGGCATGCTaGAGCTGGCTTGCACTCACT +
Preference number: 4 (lower is better)
Translates to: GRHRCRRPRPGSGSESPPGSVAC*SWLALT
Trigger: AGTGAGTGCAAGCCAGCTCCAGCATGCCACAGATCC...AGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp GGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTCAGGGCCTTGGAAAATaGGCACACAAACGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GRHRCRRPRPGSGSESPPQGLGK*AHKRLG
Trigger: TCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTG...AGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp GGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATAGGAAAAGGTTGTGCTaGACTCCTCACCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: GTAVEGPGRDQAQKARQDRKRLC*TPHRLA
Trigger: AGCCAGGCGGTGAGGAGTCCAGCACAACCTTTTCCT...ATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR TCA 90 bp TTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCTGCCCACTGTCCCATTaGCCGCAAGAAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LEGTAVEGPGRDQAQKARCPLSH*PQERLW
Trigger: CCAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCA...GCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp AGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAACATCGCCTGCTCCAGTaGTCACTGCCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: RRPRPGSGSESPPRFHGQHRLLQ*SLPTVP
Trigger: TGGGACAGTGGGCAGTGATCACTGGAGCAGGCGATG...TTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGTTCAGCGGACTAGGTTaGAGTGCTGGTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPFSGLG*SAGLLL
Trigger: GAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAA...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR GCA 90 bp GGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATGACGTCCCCCATGGCTaGACTCAACAGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: GTAVEGPGRDQAQKARQDDVPHG*TQQTVS
Trigger: TGAAACAGTCTGTTGAGTGCAGCCATGGGGGACGTC...ATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTCCTCTTGCAGGGCCTTaGAAAATGCGCACACAAACG +
Preference number: 4 (lower is better)
Translates to: EGTAVEGPGRDQAQKARLPLAGP*KMRTQT
Trigger: CGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGG...AAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGTTTCAGCCCTGGCCGTaGCTCTCTGTGTATGCCTCC +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLFQPWP*LSVYAS
Trigger: GGAGGCATACACAGAGAGCCACGGCCAGGGCTGAAA...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp GAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTGTGCATCGCCTGCTCCAGTaGTCACTGCCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: EGPGRDQAQKARLCFMFVHRLLQ*SLPTVP
Trigger: TGGGACAGTGGGCAGTGATCACTGGAGCAGGCGATG...CACAAACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR TCA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCATCGCCTGCTCCAGTaGTCACTGCCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLHRLLQ*SLPTVP
Trigger: TGGGACAGTGGGCAGTGATCACTGGAGCAGGCGATG...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGCGGACTAGGTTGAAGTaGTGGTCTGCTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLRTRLK*WSAPLV
Trigger: GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCG...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: EGTAVEGPGRDQAQKARQGAFRK*LGRRFG
Trigger: TCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACC...TTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CCA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTCGCACACAAACGCCTTaGAAGCTGAGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: EGTAVEGPGRDQAQKARLRTQTP*KLSTWS
Trigger: ACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCG...AAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp GGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAAGACTGTTTCAGCCCTaGCCGTGGCTCTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: GPGRDQAQKARQDFMGKARLFQP*PWLSVY
Trigger: ATACACAGAGAGCCACGGCCAGGGCTGAAACAGTCT...TGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCCAGGACGTCCCCCATaGCTGCACTCAACAGACTGT +
Preference number: 4 (lower is better)
Translates to: SPLHLQRTRLKCWSAPLVPGRPP*LHSTDC
Trigger: ACAGTCTGTTGAGTGCAGCCATGGGGGACGTCCTGG...GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp GGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTAGTCGAGACAGCATATaGGGTCAGCACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: GTAVEGPGRDQAQKARLCSRDSI*GQHLDD
Trigger: ATCATCCAGGTGCTGACCCCATATGCTGTCTCGACT...ACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGGACTCCTCACCGCCTaGCTACCTGACCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSGLLTA*LPDLGV
Trigger: AACACCAAGGTCAGGTAGCCAGGCGGTGAGGAGTCC...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCATATGCTGGATCTGTaGCATGCTGGAGCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPHMLDL*HAGAGL
Trigger: CAAGCCAGCTCCAGCATGCCACAGATCCAGCATATG...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR TCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCCATCGCCTGCTCCAGTaGTCACTGCCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFHRLLQ*SLPTVP
Trigger: TGGGACAGTGGGCAGTGATCACTGGAGCAGGCGATG...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATCCAGCATGGGACTGGTaGGGAAAAGGTTGTGCTGGA +
Preference number: 4 (lower is better)
Translates to: RCRRPRPGSGSESPPRFHPAWDW*GKGCAG
Trigger: TCCAGCACAACCTTTTCCTCACCAGTCCCATGCTGG...ATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR TCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTTTCAGCGGACTAGGTTaGAGTGCTGGTCTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAFSGLG*SAGLLL
Trigger: GAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAA...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp TTTGGTGAGGATGTGCAGCAGCGCCCAAGCAGTCTGGCATTATCACCCGGTGCAAGTTCAGGAGTTTGGTaGGGATGTGCAGCAGCGCCC +
Preference number: 4 (lower is better)
Translates to: FGEDVQQRPSSLALSPGASSGVW*GCAAAP
Trigger: GGGCGCTGCTGCACATCCTCACCAAACTCCTGAACT...TGCACCGGGTGATAATGCCAGACTGCTTGGGCGCTGCTGCACATCCTCACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCCCAATTCCATCGCCTaGTCCAGTGATCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: SPLHLQRTRLKCWSAPLVPNSIA*SSDHCP
Trigger: TGGGCAGTGATCACTGGAGCAGGCGATGGAATTGGG...GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGCAGGGCCTTGGAAAATaGGCACACAAACGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLQGLGK*AHKRLG
Trigger: TCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTG...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTCCCGCCAAGATTTCATaGGCAAGGCAGCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSPAKIS*ARQPQV
Trigger: AACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGG...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
3UTR CAA 72 bp CTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGAT +
Preference number: 4 (lower is better)
Translates to: LQVCHIVCQEQP*EGTAVEGPGRD
Trigger: ATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTTGCCCACTGTCCCATTaGCCGCAAGAAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSCPLSH*PQERLW
Trigger: CCAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCA...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATTGCCCACTGTCCCATTaGCCGCAAGAAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: RCRRPRPGSGSESPPRFHCPLSH*PQERLW
Trigger: CCAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCA...ATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLLDFIR*VQEMAW
Trigger: CCAAGCCATTTCCTGAACGCACCGGATGAAATCCAG...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp GGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTGCTTTATATTCCTCTTaGAGGGCCTTGGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: GTAVEGPGRDQAQKARLCALYSS*RALENA
Trigger: CGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGC...ACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGGTTGAGCTTCAGGTATaGCACATAGTGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPVELQV*HIVCQE
Trigger: CTCCTGACACACTATGTGGCATACCTGAAGCTCAAC...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGCAATGGATGAGGCTCTaGATTTCATCCGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLQWMRL*ISSGAF
Trigger: GAACGCACCGGATGAAATCCAGAGCCTCATCCATTG...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTTGCAGGGCCTTaGAAAATGCGCACACAAACG +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAPLAGP*KMRTQT
Trigger: CGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGG...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCAGACTGTTTCAGCCCTaGCCGTGGCTCTCTGTGTAT +
Preference number: 4 (lower is better)
Translates to: SPLHLQRTRLKCWSAPLVRLFQP*PWLSVY
Trigger: ATACACAGAGAGCCACGGCCAGGGCTGAAACAGTCT...GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCTATGGGGTCAGCACCTaGATGATGACTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LEGTAVEGPGRDQAQKARYGVST*MMTSFA
Trigger: AGCAAAAGAAGTCATCATCCAGGTGCTGACCCCATA...GCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCGCTGGTCTGCTCCTCTaGTCCTCTTCAGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFAGLLL*SSSASM
Trigger: CATGCTGGCTGAAGAGGACCAGAGGAGCAGACCAGC...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTACTAGGTTGAAGTGCTaGTCTGCTCCTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSTRLKC*SAPLVL
Trigger: GAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGT...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp GGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTGAGACCTTTCTGCCTTaGTTCCATATGTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: GRHRCRRPRPGSGSESPPETFLP*FHMFQN
Trigger: ATTCTGAAACATATGGAATCAAGGCAGAAAGGTCTC...AGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR TCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTAAACGCCTTGGAAGCTaGGTACATGGAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSKRLGS*VHGVER
Trigger: CCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTT...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATAAACGCCTTGGAAGCTaGGTACATGGAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RCRRPRPGSGSESPPRFHKRLGS*VHGVER
Trigger: CCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTT...ATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATAAACGCCTTGGAAGCTaGGTACATGGAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RCRRPRPGSGSESPPLFHKRLGS*VHGVER
Trigger: CCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTT...ATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTCCCAATTCCATCGCCTaGTCCAGTGATCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVPNSIA*SSDHCP
Trigger: TGGGCAGTGATCACTGGAGCAGGCGATGGAATTGGG...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: RCRRPRPGSGSESPPLFHLDFIR*VQEMAW
Trigger: CCAAGCCATTTCCTGAACGCACCGGATGAAATCCAG...ATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAGGGCCTTGGAAAATaGGCACACAAACGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLQGLGK*AHKRLG
Trigger: TCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTG...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTCGATCTCTGTGGCAATaGCCTCTAGTTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSRSLWQ*PLVFPA
Trigger: CGCTGGAAAAACTAGAGGCCATTGCCACAGAGATCG...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000375263.8
CDS-3UTR CCA 90 bp GGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCTTGGGAGAAGGTTTaGAAGCATTCCGACATTGTT +
Preference number: 4 (lower is better)
Translates to: GPGRDQAQKARQDFMGKAAWEKV*KHSDIV
Trigger: AACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGC...TGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAGAFRK*LGRRFG
Trigger: TCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACC...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTCGCACACAAACGCCTTaGAAGCTGAGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSRTQTP*KLSTWS
Trigger: ACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCG...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp ATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCAGGACGTCCCCCATaGCTGCACTCAACAGACTGT +
Preference number: 4 (lower is better)
Translates to: IRLRKPAKISWARQPQVSPGRPP*LHSTDC
Trigger: ACAGTCTGTTGAGTGCAGCCATGGGGGACGTCCTGG...TGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTAGTCGAGACAGCATATaGGGTCAGCACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSSRDSI*GQHLDD
Trigger: ATCATCCAGGTGCTGACCCCATATGCTGTCTCGACT...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTAGTCGAGACAGCATATaGGGTCAGCACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSASRDSI*GQHLDD
Trigger: ATCATCCAGGTGCTGACCCCATATGCTGTCTCGACT...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCCCCGCCAAGATTTCATaGGCAAGGCAGCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFPAKIS*ARQPQV
Trigger: AACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGG...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCAGGAAAAGGTTGTGCTaGACTCCTCACCGCCTGGCT +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFRKRLC*TPHRLA
Trigger: AGCCAGGCGGTGAGGAGTCCAGCACAACCTTTTCCT...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp ATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCAGCTGGTCTGCTCCTCTaGTCCTCTTCAGCCAGCATG +
Preference number: 4 (lower is better)
Translates to: IRLRKPAKISWARQPQVSAGLLL*SSSASM
Trigger: CATGCTGGCTGAAGAGGACCAGAGGAGCAGACCAGC...TGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR TCA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTAAGAAATGTTCAGGATaGGACCTTTCTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: EGTAVEGPGRDQAQKARLKKCSG*DLSALI
Trigger: AATCAAGGCAGAAAGGTCTCATCCTGAACATTTCTT...AAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp AAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGCCCAATTCCATCGCCTaGTCCAGTGATCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: KPAKISWARQPQVSPPIVPNSIA*SSDHCP
Trigger: TGGGCAGTGATCACTGGAGCAGGCGATGGAATTGGG...CACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp TTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCAGGATGAGACCTTTCTaGCTTGATTCCATATGTTTC +
Preference number: 4 (lower is better)
Translates to: LEGTAVEGPGRDQAQKARRMRPF*LDSICF
Trigger: GAAACATATGGAATCAAGGCAGAAAGGTCTCATCCT...GCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000648146.1
CDS-3UTR GCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCGACGTCCCCCATGGCTaGACTCAACAGACTGTTTCA +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFDVPHG*TQQTVS
Trigger: TGAAACAGTCTGTTGAGTGCAGCCATGGGGGACGTC...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCGTTGAAGTGCTGGTCTaGTCCTCTGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFVEVLV*SSGPLQ
Trigger: CTGAAGAGGACCAGAGGAGCAGACCAGCACTTCAAC...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTCGGACTAGGTTGAAGTaGTGGTCTGCTCCTCTGGTC +
Preference number: 4 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPRTRLK*WSAPLV
Trigger: GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCG...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR GCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTAAAATGTGTATTCTATaGCTCTGTGACCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSKMCIL*LCDPSP
Trigger: GGGGCTGGGGTCACAGAGGCATAGAATACACATTTT...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTCCGCAAGAAAGACTTTaGCAAAACTTTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: EGTAVEGPGRDQAQKARLPQERL*QNFPVV
Trigger: AACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGG...AAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTTCCGCTCGATCTCTGTaGCAATGGCCTCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSASARSL*QWPLVF
Trigger: AAAAACTAGAGGCCATTGCCACAGAGATCGAGCGGA...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000375263.8
CDS-3UTR CCA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGGAGGTGATGTTACAATaGATGAGGCTCTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPEVMLQ*MRLWIS
Trigger: TGAAATCCAGAGCCTCATCCATTGTAACATCACCTC...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000648146.1
CDS-3UTR CCA 90 bp GCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGTGGAAGCTGAGTACATaGAGTAGAGAGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AVEGPGRDQAQKARQDFMWKLST*SREAKE
Trigger: TTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCA...CATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCCCCGCCAAGATTTCATaGGCAAGGCAGCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGPAKIS*ARQPQV
Trigger: AACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGG...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTGCCCACTGTCCCATTaGCCGCAAGAAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPCPLSH*PQERLW
Trigger: CCAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCA...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp GAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGCCCACTGTCCCATTaGCCGCAAGAAAGACTTTGG +
Preference number: 4 (lower is better)
Translates to: ESPPRFHGQGSHRFHLQLCPLSH*PQERLW
Trigger: CCAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCA...CAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp AGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTAAACGCCTTGGAAGCTaGGTACATGGAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: RLRKPAKISWARQPQVSPKRLGS*VHGVER
Trigger: CCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTT...AGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTGCTTTATATTCCTCTTaGAGGGCCTTGGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAALYSS*RALENA
Trigger: CGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGC...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTCGATCTCTGTGGCAATaGCCTCTAGTTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVRSLWQ*PLVFPA
Trigger: CGCTGGAAAAACTAGAGGCCATTGCCACAGAGATCG...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCTCCGCTCGATCTCTGTaGCAATGGCCTCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLSARSL*QWPLVF
Trigger: AAAAACTAGAGGCCATTGCCACAGAGATCGAGCGGA...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS-3UTR CCA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTTGGGAGAAGGTTTaGAAGCATTCCGACATTGTT +
Preference number: 4 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSAWEKV*KHSDIV
Trigger: AACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGC...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTGTTCAGGAAATGGCTTaGGAGAAGGTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAVQEMA*EKVWKH
Trigger: ATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAAC...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp GCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGTTCAGGAAATGGCTTaGGAGAAGGTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: AVEGPGRDQAQKARQDFMVQEMA*EKVWKH
Trigger: ATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAAC...CATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVGAFRK*LGRRFG
Trigger: TCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACC...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGAGGTGATGTTACAATaGATGAGGCTCTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLEVMLQ*MRLWIS
Trigger: TGAAATCCAGAGCCTCATCCATTGTAACATCACCTC...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCTGGAAGCTGAGTACATaGAGTAGAGAGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLWKLST*SREAKE
Trigger: TTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCA...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp GCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGTATGGGGTCAGCACCTaGATGATGACTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: AVEGPGRDQAQKARQDFMYGVST*MMTSFA
Trigger: AGCAAAAGAAGTCATCATCCAGGTGCTGACCCCATA...CATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp AGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTAGTCGAGACAGCATATaGGGTCAGCACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: RLRKPAKISWARQPQVSPSRDSI*GQHLDD
Trigger: ATCATCCAGGTGCTGACCCCATATGCTGTCTCGACT...AGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp AAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTCCCGCCAAGATTTCATaGGCAAGGCAGCCACAGGTT +
Preference number: 4 (lower is better)
Translates to: KARQDFMGKAATGFTSNCPAKIS*ARQPQV
Trigger: AACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGG...ACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGGAAACAGGGCTATCCCAGACTAGGTTGAAGTGCTaGTCTGCTCCTCTGGTCCTC +
Preference number: 4 (lower is better)
Translates to: PWKLSTWSREAKETGLSQTRLKC*SAPLVL
Trigger: GAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGT...CTGGGATAGCCCTGTTTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp AGAGTGTGGGAGACAGAGCCCACACAGGAGATGTGTGGTCCAGAGAGGAGTTCAGCAGAGGAGCAACCCTaGAACTTGCTTCTTGAAGAG +
Preference number: 4 (lower is better)
Translates to: RVWETEPTQEMCGPERSSAEEQP*NLLLEE
Trigger: CTCTTCAAGAAGCAAGTTCCAGGGTTGCTCCTCTGC...TGAACTCCTCTCTGGACCACACATCTCCTGTGTGGGCTCTGTCTCCCACACTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCGTGGCATGCTGGAGCTaGCTTGCACTCACTCATAAG +
Preference number: 4 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGVACWS*LALTHK
Trigger: CTTATGAGTGAGTGCAAGCCAGCTCCAGCATGCCAC...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR TCA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGAGACCTTTCTGCCTTaGTTCCATATGTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLETFLP*FHMFQN
Trigger: ATTCTGAAACATATGGAATCAAGGCAGAAAGGTCTC...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR TCA 90 bp AGAGTGTGGGAGACAGAGCCCACACAGGAGATGTGTGGTCCAGAGAGGAGTTCACACACATCAGCCGGATaGTTAGAGAAATTCTCCTGG +
Preference number: 4 (lower is better)
Translates to: RVWETEPTQEMCGPERSSHTSAG*LEKFSW
Trigger: CCAGGAGAATTTCTCTAATCATCCGGCTGATGTGTG...TGAACTCCTCTCTGGACCACACATCTCCTGTGTGGGCTCTGTCTCCCACACTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp CGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGACATACCCAATTCCATCGCCTaGTCCAGTGATCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: RQDFMGKAATGFTSNCDIPNSIA*SSDHCP
Trigger: TGGGCAGTGATCACTGGAGCAGGCGATGGAATTGGG...TATGTCACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGLDFIR*VQEMAW
Trigger: CCAAGCCATTTCCTGAACGCACCGGATGAAATCCAG...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000650005.1
CDS-3UTR GCA 90 bp GAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: ESPPRFHGQGSHRFHLQLLDFIR*VQEMAW
Trigger: CCAAGCCATTTCCTGAACGCACCGGATGAAATCCAG...CAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR GCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCGTTGAGCTTCAGGTATaGCACATAGTGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFVELQV*HIVCQE
Trigger: CTCCTGACACACTATGTGGCATACCTGAAGCTCAAC...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTGTTGAGCTTCAGGTATaGCACATAGTGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVVELQV*HIVCQE
Trigger: CTCCTGACACACTATGTGGCATACCTGAAGCTCAAC...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp TTTGGTGAGGATGTGCAGCAGCGCCCAAGCAGTCTGGCATTATCACCCGGTGCAAGAGACGTAGATTTGTaGCAGAAACAGAGTGTGGGA +
Preference number: 4 (lower is better)
Translates to: FGEDVQQRPSSLALSPGARDVDL*QKQSVG
Trigger: TCCCACACTCTGTTTCTGGCACAAATCTACGTCTCT...TGCACCGGGTGATAATGCCAGACTGCTTGGGCGCTGCTGCACATCCTCACCAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp AGCAGTCCAGGAGTGGTAAGAGCCTCTTCTGCCATATGCTGGATCTGTGGCATGGGTAAGAGCCTCTTCTaGCATATGCTGGATCTGTGG +
Preference number: 4 (lower is better)
Translates to: SSPGVVRASSAICWICGMGKSLF*HMLDLW
Trigger: CCACAGATCCAGCATATGGCAGAAGAGGCTCTTACC...CATGCCACAGATCCAGCATATGGCAGAAGAGGCTCTTACCACTCCTGGACTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR GCA 90 bp ATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCAAGGATGAGACCTTTCTaGCTGGATTTCATCCGGTGC +
Preference number: 4 (lower is better)
Translates to: IRLRKPAKISWARQPQVSRMRPF*LDFIRC
Trigger: GCACCGGATGAAATCCAGGCAGAAAGGTCTCATCCT...TGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTTCAGTAAAACACATCTaGAGAATCTCACGCACTTCG +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSASVKHI*RISRTS
Trigger: CGAAGTGCGTGAGATTCTCCAGATGTGTTTTACTGA...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp TGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTCCGCTCGATCTCTGTaGCAATGGCCTCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: CRRPRPGSGSESPPLFHVSARSL*QWPLVF
Trigger: AAAAACTAGAGGCCATTGCCACAGAGATCGAGCGGA...AACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCGCTTGGGAGAAGGTTTaGAAGCATTCCGACATTGTT +
Preference number: 4 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLAWEKV*KHSDIV
Trigger: AACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGC...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CCA 90 bp GAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTGTGGCTTGGGAGAAGGTTTaGAAGCATTCCGACATTGTT +
Preference number: 4 (lower is better)
Translates to: EGPGRDQAQKARLCFMFVAWEKV*KHSDIV
Trigger: AACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGC...CACAAACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCCAATGGATGAGGCTCTaGATTTCATCCGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGQWMRL*ISSGAF
Trigger: GAACGCACCGGATGAAATCCAGAGCCTCATCCATTG...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000648146.1
CDS-3UTR CCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCTGGAAGCTGAGTACATaGAGTAGAGAGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFWKLST*SREAKE
Trigger: TTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCA...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp GCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTGTGTTTGTGGAAGCTGAGTACATaGAGTAGAGAGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: AQAGIRLRKPAFVSCLCLWKLST*SREAKE
Trigger: TTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCA...CAAACACAAACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATCGCACACAAACGCCTTaGAAGCTGAGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: QKARQDFMGKAATGFTSNRTQTP*KLSTWS
Trigger: ACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCG...ATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTCTTCTGCCATATGCTaGATCTGTGGCATGCTGGAG +
Preference number: 4 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPSSAIC*ICGMLE
Trigger: CTCCAGCATGCCACAGATCCAGCATATGGCAGAAGA...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR TCA 90 bp AGCATCAAGAAACATCTGACTCCCATTCTGTCATTCTGTACCCACGTCATCTTGCATCGCCTGCTCCAGTaGTCACTGCCCACTGTCCCA +
Preference number: 4 (lower is better)
Translates to: SIKKHLTPILSFCTHVILHRLLQ*SLPTVP
Trigger: TGGGACAGTGGGCAGTGATCACTGGAGCAGGCGATG...CAAGATGACGTGGGTACAGAATGACAGAATGGGAGTCAGATGTTTCTTGATGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR TCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTAAGAAATGTTCAGGATaGGACCTTTCTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAKKCSG*DLSALI
Trigger: AATCAAGGCAGAAAGGTCTCATCCTGAACATTTCTT...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCGCTTTATATTCCTCTTaGAGGGCCTTGGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFALYSS*RALENA
Trigger: CGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGC...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR GCA 90 bp AAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGGTTGAGCTTCAGGTATaGCACATAGTGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: KPAKISWARQPQVSPPIVVELQV*HIVCQE
Trigger: CTCCTGACACACTATGTGGCATACCTGAAGCTCAAC...CACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp ATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCAGTTGAGCTTCAGGTATaGCACATAGTGTGTCAGGAG +
Preference number: 4 (lower is better)
Translates to: IRLRKPAKISWARQPQVSVELQV*HIVCQE
Trigger: CTCCTGACACACTATGTGGCATACCTGAAGCTCAAC...TGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCGCAAGAAAGACTTTaGCAAAACTTTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAPQERL*QNFPVV
Trigger: AACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGG...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp AGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTAGCCTATGTGAGTCCATCCGCTCGATCTCTGTaGCAATGGCCTCTAGTTTTT +
Preference number: 4 (lower is better)
Translates to: RELLHSQLEEEGLAYVSPSARSL*QWPLVF
Trigger: AAAAACTAGAGGCCATTGCCACAGAGATCGAGCGGA...TGGACTCACATAGGCTAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp AAAATGCGCACACAAACGCCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGCCTCTTGCAGGGCCTTaGAAAATGCGCACACAAACG +
Preference number: 4 (lower is better)
Translates to: KMRTQTPWKLSTWSREAKPLAGP*KMRTQT
Trigger: CGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGG...CTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCTATGGGGTCAGCACCTaGATGATGACTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFYGVST*MMTSFA
Trigger: AGCAAAAGAAGTCATCATCCAGGTGCTGACCCCATA...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp AAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTAGTCGAGACAGCATATaGGGTCAGCACCTGGATGAT +
Preference number: 4 (lower is better)
Translates to: KARQDFMGKAATGFTSNCSRDSI*GQHLDD
Trigger: ATCATCCAGGTGCTGACCCCATATGCTGTCTCGACT...ACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp AAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGAAGAAATGTTCAGGATaGGACCTTTCTGCCTCGAAC +
Preference number: 4 (lower is better)
Translates to: KPAKISWARQPQVSPPIVKKCSG*DLSASN
Trigger: GTTCGAGGCAGAAAGGTCTCATCCTGAACATTTCTT...CACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648332.1
CDS-3UTR GCA 90 bp TGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTCAGGGCCTTGGAAAATaGGCACACAAACGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: CHCSRDSIWGQHLDDDFFQGLGK*AHKRLG
Trigger: TCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTG...AAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTGCTTTATATTCCTCTTaGAGGGCCTTGGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPALYSS*RALENA
Trigger: CGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGC...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp CTGAGTACATGGAGTAGAGAGGCCAAGGAAACAGGGCTATCCCAGAAGAAATGTGTTGAAGTGCTGGTCTaGTCCTCTGGTCCTCTTCAG +
Preference number: 4 (lower is better)
Translates to: LSTWSREAKETGLSQKKCVEVLV*SSGPLQ
Trigger: CTGAAGAGGACCAGAGGAGCAGACCAGCACTTCAAC...ACATTTCTTCTGGGATAGCCCTGTTTCCTTGGCCTCTCTACTCCATGTACTCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR GCA 90 bp AAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTAAAATGTGTATTCTATaGCTCTGTGACCCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: KARQDFMGKAATGFTSNCKMCIL*LCDPSP
Trigger: GGGGCTGGGGTCACAGAGGCATAGAATACACATTTT...ACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR GCA 90 bp CTAAAGAACCATGAAGTGGGCAAAAGTGCATGTCTGAACGGTTTCATCACTCACGGCATTATCACCCGGTaGAGCAGACTCGGGGCTTAC +
Preference number: 4 (lower is better)
Translates to: LKNHEVGKSACLNGFITHGIITR*SRLGAY
Trigger: GTAAGCCCCGAGTCTGCTGCACCGGGTGATAATGCC...GTGAGTGATGAAACCGTTCAGACATGCACTTTTGCCCACTTCATGGTTCTTTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp GCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTGTGTTTGTCAGTAAAACACATCTaGAGAATCTCACGCACTTCG +
Preference number: 4 (lower is better)
Translates to: AQAGIRLRKPAFVSCLCLSVKHI*RISRTS
Trigger: CGAAGTGCGTGAGATTCTCCAGATGTGTTTTACTGA...CAAACACAAACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCCGCAAGAAAGACTTTaGCAAAACTTTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLPQERL*QNFPVV
Trigger: AACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGG...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp TACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTAGCCGATCTCTGTGGCAATaGCCTCTAGTTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: YGFSKGATPFSAGGRGVSRSLWQ*PLVFPA
Trigger: CGCTGGAAAAACTAGAGGCCATTGCCACAGAGATCG...GCTAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCGTTCAGGAAATGGCTTaGGAGAAGGTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGVQEMA*EKVWKH
Trigger: ATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAAC...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000650005.1
CDS-3UTR CCA 90 bp AAAATGCGCACACAAACGCCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGCGCACACAAACGCCTTaGAAGCTGAGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: KMRTQTPWKLSTWSREAKRTQTP*KLSTWS
Trigger: ACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCG...CTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGCATTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp AGCAGTCCAGGAGTGGTAAGAGCCTCTTCTGCCATATGCTGGATCTGTGGCATGTATGGGGTCAGCACCTaGATGATGACTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: SSPGVVRASSAICWICGMYGVST*MMTSFA
Trigger: AGCAAAAGAAGTCATCATCCAGGTGCTGACCCCATA...CATGCCACAGATCCAGCATATGGCAGAAGAGGCTCTTACCACTCCTGGACTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CCA 90 bp TGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCTAGCGCCCAAGCAGTCTaGCATTATCACCCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: CGSISKNPASTVDGHNSPSAQAV*HYHPVQ
Trigger: CTGCACCGGGTGATAATGCCAGACTGCTTGGGCGCT...AGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR TCA 90 bp TGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTAAACGCCTTGGAAGCTaGGTACATGGAGTAGAGAGG +
Preference number: 4 (lower is better)
Translates to: CHCSRDSIWGQHLDDDFFKRLGS*VHGVER
Trigger: CCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTT...AAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp TATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGACCCAATTCCATCGCCTaGTCCAGTGATCACTGCCCA +
Preference number: 4 (lower is better)
Translates to: YLDTLSLQSRQHMGSAPGPNSIA*SSDHCP
Trigger: TGGGCAGTGATCACTGGAGCAGGCGATGGAATTGGG...TCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCAGGATGAGACCTTTCTaGCTTGATTCCATATGTTTC +
Preference number: 4 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFRMRPF*LDSICF
Trigger: GAAACATATGGAATCAAGGCAGAAAGGTCTCATCCT...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CCA 90 bp AAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGTCAGTAAAACACATCTaGAGAATCTCACGCACTTCG +
Preference number: 4 (lower is better)
Translates to: KPAKISWARQPQVSPPIVSVKHI*RISRTS
Trigger: CGAAGTGCGTGAGATTCTCCAGATGTGTTTTACTGA...CACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTCAGTAAAACACATCTaGAGAATCTCACGCACTTCG +
Preference number: 4 (lower is better)
Translates to: QKARQDFMGKAATGFTSNSVKHI*RISRTS
Trigger: CGAAGTGCGTGAGATTCTCCAGATGTGTTTTACTGA...ATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp GACTTCTTTTGCTTTATATTCCTCTTGCAGGGCCTTGGAAAATGCGCACACAAAGGACTCCTCACCGCCTaGCTACCTGACCTTGGTGTT +
Preference number: 4 (lower is better)
Translates to: DFFCFIFLLQGLGKCAHKGLLTA*LPDLGV
Trigger: AACACCAAGGTCAGGTAGCCAGGCGGTGAGGAGTCC...TTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCAAAAGAAGTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp TCAGCTGGAGGAAGAGGGGTTAGCCTATGTGAGTCCAGGAGAACAGAAAGACAAGCTTACACAGGACGATaGGATACCTGGATTTCATCC +
Preference number: 4 (lower is better)
Translates to: SAGGRGVSLCESRRTERQAYTGR*DTWISS
Trigger: GGATGAAATCCAGGTATCCCATCGTCCTGTGTAAGC...TTGTCTTTCTGTTCTCCTGGACTCACATAGGCTAACCCCTCTTCCTCCAGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp AATACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTACTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGG +
Preference number: 4 (lower is better)
Translates to: NTVFQRELLHSQLEEEGLLDFIR*VQEMAW
Trigger: CCAAGCCATTTCCTGAACGCACCGGATGAAATCCAG...TAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp AAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTGAGGATGAGACCTTTCTaGCTTGATTCCATATGTTTC +
Preference number: 4 (lower is better)
Translates to: KPAKISWARQPQVSPPIVRMRPF*LDSICF
Trigger: GAAACATATGGAATCAAGGCAGAAAGGTCTCATCCT...CACAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR GCA 90 bp CTACAGTGGATGGGCACAATTCTCCTGAGTTGCCAAATTTCAAGTTACTACATGAGTTTGGTGAGGATGTaGAGCAGCGCCCAAGCAGTC +
Preference number: 4 (lower is better)
Translates to: LQWMGTILLSCQISSYYMSLVRM*SSAQAV
Trigger: GACTGCTTGGGCGCTGCTGCACATCCTCACCAAACT...CATGTAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGACCTCTTGCAGGGCCTTaGAAAATGCGCACACAAACG +
Preference number: 4 (lower is better)
Translates to: YLDTLSLQSRQHMGSAPGPLAGP*KMRTQT
Trigger: CGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGG...TCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp GGCTCTGGATTTCATCCGGTGCGTTCAGGAAATGGCTTGGGAGAAGGTTTGGAAAAGAAATGTTCAGGATaGGACCTTTCTGCCTTGATT +
Preference number: 4 (lower is better)
Translates to: GSGFHPVRSGNGLGEGLEKKCSG*DLSALI
Trigger: AATCAAGGCAGAAAGGTCTCATCCTGAACATTTCTT...TTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR TCA 90 bp TACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTAGCGCATCAAGAAACATCTaGCTCCCATTCTGTCATTCT +
Preference number: 4 (lower is better)
Translates to: YGFSKGATPFSAGGRGVSASRNI*LPFCHS
Trigger: AGAATGACAGAATGGGAGTCAGATGTTTCTTGATGC...GCTAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR TCA 90 bp CATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTTGCAAGAAATGTTCAGGATaGGACCTTTCTGCCTGGATT +
Preference number: 4 (lower is better)
Translates to: HCSRDSIWGQHLDDDFFCKKCSG*DLSAWI
Trigger: AATCCAGGCAGAAAGGTCTCATCCTGAACATTTCTT...GCAAAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS-3UTR CCA 90 bp TGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTGTTCAGGAAATGGCTTaGGAGAAGGTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: CHCSRDSIWGQHLDDDFFVQEMA*EKVWKH
Trigger: ATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAAC...AAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CCA 90 bp CATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTTGCGAGGTGATGTTACAATaGATGAGGCTCTGGATTTCA +
Preference number: 4 (lower is better)
Translates to: HCSRDSIWGQHLDDDFFCEVMLQ*MRLWIS
Trigger: TGAAATCCAGAGCCTCATCCATTGTAACATCACCTC...GCAAAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp TTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCCCTCTTGCAGGGCCTTaGAAAATGCGCACACAAACG +
Preference number: 4 (lower is better)
Translates to: FVFRYFVIAVETAYGVSTPLAGP*KMRTQT
Trigger: CGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGG...GGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp ATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCTTTCAGCCCTGGCCGTaGCTCTCTGTGTATGCCTCC +
Preference number: 4 (lower is better)
Translates to: ITFVFRYFVIAVETAYGVFQPWP*LSVYAS
Trigger: GGAGGCATACACAGAGAGCCACGGCCAGGGCTGAAA...GACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR TCA 90 bp CTAAAGAACCATGAAGTGGGCAAAAGTGCATGTCTGAACGGTTTCATCACTCACGGTGCTAAAGAACCATaGAGTGGGCAAAAGTGCATG +
Preference number: 4 (lower is better)
Translates to: LKNHEVGKSACLNGFITHGAKEP*SGQKCM
Trigger: CATGCACTTTTGCCCACTTCATGGTTCTTTAGCACC...GTGAGTGATGAAACCGTTCAGACATGCACTTTTGCCCACTTCATGGTTCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTCGATCTCTGTGGCAATaGCCTCTAGTTTTTCCAGCG +
Preference number: 4 (lower is better)
Translates to: LYLDTLSLQSRQHMGSAPRSLWQ*PLVFPA
Trigger: CGCTGGAAAAACTAGAGGCCATTGCCACAGAGATCG...AGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS-3UTR CCA 90 bp GACTTCTTTTGCTTTATATTCCTCTTGCAGGGCCTTGGAAAATGCGCACACAAACAATGGATGAGGCTCTaGATTTCATCCGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: DFFCFIFLLQGLGKCAHKQWMRL*ISSGAF
Trigger: GAACGCACCGGATGAAATCCAGAGCCTCATCCATTG...TTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCAAAAGAAGTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR GCA 90 bp ATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCCAGGGCCTTGGAAAATaGGCACACAAACGCCTTGGA +
Preference number: 4 (lower is better)
Translates to: ITFVFRYFVIAVETAYGVQGLGK*AHKRLG
Trigger: TCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTG...GACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp TTATATTCCTCTTGCAGGGCCTTGGAAAATGCGCACACAAACGCCTTGGAAGCTCCGCAAGAAAGACTTTaGCAAAACTTTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: LYSSCRALENAHTNALEAPQERL*QNFPVV
Trigger: AACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGG...AGCTTCCAAGGCGTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGAATATAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp GCACATATATTGATCACATACCTTGACTACGGAGGTGATGTTACAATGGATGAGGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: AHILITYLDYGGDVTMDEGAFRK*LGRRFG
Trigger: TCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACC...CTCATCCATTGTAACATCACCTCCGTAGTCAAGGTATGTGATCAATATATGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGAAGCTGAGTACATaGAGTAGAGAGGCCAAGGAA +
Preference number: 4 (lower is better)
Translates to: FVFRYFVIAVETAYGVSTWKLST*SREAKE
Trigger: TTCCTTGGCCTCTCTACTCCATGTACTCAGCTTCCA...GGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACGCACACAAACGCCTTaGAAGCTGAGTACATGGAGT +
Preference number: 4 (lower is better)
Translates to: HLYLDTLSLQSRQHMGSARTQTP*KLSTWS
Trigger: ACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCG...TGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR TCA 90 bp TTGGTGCTAAAGAACCATGAAGTGGGCAAAAGTGCATGTCTGAACGGTTTCATCTGGGCACAATTCTCCTaGGTTGCCAAATTTCAAGTT +
Preference number: 4 (lower is better)
Translates to: LVLKNHEVGKSACLNGFIWAQFS*VAKFQV
Trigger: AACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCA...GATGAAACCGTTCAGACATGCACTTTTGCCCACTTCATGGTTCTTTAGCACCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp TTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCGCTTTATATTCCTCTTaGAGGGCCTTGGAAAATGCG +
Preference number: 4 (lower is better)
Translates to: FVFRYFVIAVETAYGVSTALYSS*RALENA
Trigger: CGCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGC...GGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR GCA 90 bp TTCCAGCAAGCATGTACTAGCATCAAGAAACATCTGACTCCCATTCTGTCATTCAGCAACCCTGGAACTTaGTTCTTGAAGAGACGTAGA +
Preference number: 4 (lower is better)
Translates to: FQQACTSIKKHLTPILSFSNPGT*FLKRRR
Trigger: TCTACGTCTCTTCAAGAAGCAAGTTCCAGGGTTGCT...GAATGACAGAATGGGAGTCAGATGTTTCTTGATGCTAGTACATGCTTGCTGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR GCA 90 bp GTTCGATTTCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCTGAGTGATTTCAAAGAATCCTaGTTCTACAGTGGATGGGCA +
Preference number: 4 (lower is better)
Translates to: VRFQRILLLQWMGTILLSDFKES*FYSGWA
Trigger: TGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATC...ACTCAGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp AATACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTACCGCAAGAAAGACTTTaGCAAAACTTTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: NTVFQRELLHSQLEEEGLPQERL*QNFPVV
Trigger: AACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGG...TAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTATT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp GTCATCTTGACTAGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTGGACGATGGGATACCTaGATTTCATCCGGTGCGTTC +
Preference number: 4 (lower is better)
Translates to: VILTRHQLRVSWKTRNYIGRWDT*ISSGAF
Trigger: GAACGCACCGGATGAAATCCAGGTATCCCATCGTCC...AATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCTAGTCAAGATGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
3UTR CAA 72 bp CTGACTCCCATTCTGTCATTCTGTACCCACGTCATCTaGACTAGACATCAATTAAGAGTTTCCTGGAAAACT +
Preference number: 4 (lower is better)
Translates to: LTPILSFCTHVI*TRHQLRVSWKT
Trigger: AGTTTTCCAGGAAACTCTTAATTGATGTCTAGTCAAGATGACGTGGGTACAGAATGACAGAATGGGAGTCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR TCA 90 bp AGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATAGCAAAAGTGCATGTCTaGACGGTTTCATCACTCACC +
Preference number: 4 (lower is better)
Translates to: RHQLRVSWKTRNYIPGGIAKVHV*TVSSLT
Trigger: GGTGAGTGATGAAACCGTTCAGACATGCACTTTTGC...TATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TGGTTATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGA +
Preference number: 4 (lower is better)
Translates to: WLSHLYLDTLSLQSRQHMGAFRK*LGRRFG
Trigger: TCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACC...CATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGATAACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CCA 90 bp GTCATCTTGACTAGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTAGAGGTTCTGGGCTATaGAGGGCAGGTAAAGAAACC +
Preference number: 4 (lower is better)
Translates to: VILTRHQLRVSWKTRNYIRGSGL*RAGKET
Trigger: GGTTTCTTTACCTGCCCTCCATAGCCCAGAACCTCT...AATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCTAGTCAAGATGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp AATACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTATTAGAGAAATTCTCCTaGAAAGTAGTTGGTGCTAAA +
Preference number: 4 (lower is better)
Translates to: NTVFQRELLHSQLEEEGLLEKFS*KVVGAK
Trigger: TTTAGCACCAACTACTTTCCAGGAGAATTTCTCTAA...TAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp AGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATAATCCTGCTTCTACAGTaGATGGGCACAATTCTCCTG +
Preference number: 4 (lower is better)
Translates to: RHQLRVSWKTRNYIPGGIILLLQ*MGTILL
Trigger: CAGGAGAATTGTGCCCATCCACTGTAGAAGCAGGAT...TATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR TCA 90 bp CATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCAGAGACCTTTCTGCCTTaGTTCCATATGTTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: HLYLDTLSLQSRQHMGSAETFLP*FHMFQN
Trigger: ATTCTGAAACATATGGAATCAAGGCAGAAAGGTCTC...TGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CCA 90 bp CATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCGCAAGAAAGACTTTaGCAAAACTTTCCAGTAGTT +
Preference number: 4 (lower is better)
Translates to: HLYLDTLSLQSRQHMGSAPQERL*QNFPVV
Trigger: AACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGG...TGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
3UTR CAA 72 bp CCTGCTTCTACAGTGGATGGGCACAATTCTCCTGAGTaGCCAAATTTCAAGTTACTACATGTTAATGCATTT +
Preference number: 4 (lower is better)
Translates to: PASTVDGHNSPE*PNFKLLHVNAF
Trigger: AAATGCATTAACATGTAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAGAAGCAGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR TCA 90 bp GTCATCTTGACTAGACATCAATTAAGAGTTTCCTGGAAAACTCGGAACTATATTCTGGAACTTGCTTCTTaGAGAGACGTAGATTTGTGC +
Preference number: 4 (lower is better)
Translates to: VILTRHQLRVSWKTRNYILELAS*RDVDLC
Trigger: GCACAAATCTACGTCTCTTCAAGAAGCAAGTTCCAG...AATATAGTTCCGAGTTTTCCAGGAAACTCTTAATTGATGTCTAGTCAAGATGAC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATATAAATACGGTTTTTCAGCTTGGGAGAAGGTTTaGAAGCATTCCGACATTGTT +
Preference number: 4 (lower is better)
Translates to: FPGKLGTIFLEEYKYGFSAWEKV*KHSDIV
Trigger: AACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGC...TGAAAAACCGTATTTATATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATATAAATACGGTTTTTCAGTTCAGGAAATGGCTTaGGAGAAGGTTTGGAAGCAT +
Preference number: 4 (lower is better)
Translates to: FPGKLGTIFLEEYKYGFSVQEMA*EKVWKH
Trigger: ATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAAC...TGAAAAACCGTATTTATATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TGGTTATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGTATGGGGTCAGCACCTaGATGATGACTTCTTTTGCT +
Preference number: 4 (lower is better)
Translates to: WLSHLYLDTLSLQSRQHMYGVST*MMTSFA
Trigger: AGCAAAAGAAGTCATCATCCAGGTGCTGACCCCATA...CATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGATAACCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp CTACAGTGGATGGGCACAATTCTCCTGAGTTGCCAAATTTCAAGTTACTACATGTCGGAACTATATTCCTaGAGGAATATAAATACGGTT +
Preference number: 4 (lower is better)
Translates to: LQWMGTILLSCQISSYYMSELYS*RNINTV
Trigger: AACCGTATTTATATTCCTCCAGGAATATAGTTCCGA...CATGTAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTGCCCATCCACTGTAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CCA 90 bp TGGTTATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGTCAGTAAAACACATCTaGAGAATCTCACGCACTTCG +
Preference number: 4 (lower is better)
Translates to: WLSHLYLDTLSLQSRQHMSVKHI*RISRTS
Trigger: CGAAGTGCGTGAGATTCTCCAGATGTGTTTTACTGA...CATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGATAACCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CCA 90 bp AGTTTCCTGGAAAACTCGGAACTATATTCCTGGAGGAATATAAATACGGTTTTTGAGGTGATGTTACAATaGATGAGGCTCTGTAATAAA +
Preference number: 4 (lower is better)
Translates to: SFLENSELYSWRNINTVFEVMLQ*MRLCNK
Trigger: TTTATTACAGAGCCTCATCCATTGTAACATCACCTC...AAAAACCGTATTTATATTCCTCCAGGAATATAGTTCCGAGTTTTCCAGGAAACT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: EGTAVEGPGRDQAQKARLCQEQP*EGTAVE
Trigger: TTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACA...AAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp CCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: PRPGSGSESPPRFHGQGSCQEQP*EGTAVE
Trigger: TTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACA...GCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCTGCCCACTGTCCCATaGACCGCAAGAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: PRPGSGSESPPRFHGQGSLPTVP*TARKTL
Trigger: CAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAG...GCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGTCCTCTTGCAGGGCCTaGGAAAATGCGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPSSCRA*ENAHTN
Trigger: GTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGA...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS GCA 90 bp CAGCCCTGTGAGGATGAAGAACTGTTCCAGGACGTCCCCCATGGCTaGACTCAACAGACTGTTTCAGCCCTGGCCGTGGCTCTCTGTGTA +
Preference number: 5 (lower is better)
Translates to: QPCEDEELFQDVPHG*TQQTVSALAVALCV
Trigger: TACACAGAGAGCCACGGCCAGGGCTGAAACAGTCTGTTGAGTGCAGCCATGGGGGACGTCCTGGAACAGTTCTTCATCCTCACAGGGCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp CCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCGTTCAGGAAATGGCTaGGGAGAAGGTTTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PRPGSGSESPPRFHGQGSRSGNG*GEGLEA
Trigger: TGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACG...GCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CAA 90 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCGCGCACACAAACGCCTaGGAAGCTGAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: SPLHLQRTRLKCWSAPLVAHTNA*EAEYME
Trigger: CTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGC...GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGTCCTCTTGCAGGGCCTaGGAAAATGCGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLSSCRA*ENAHTN
Trigger: GTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGA...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCTGGTGAGGAAAAGGTaGTGCTGGACTCCTCACCGC +
Preference number: 5 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLLVRKR*CWTPHR
Trigger: GCGGTGAGGAGTCCAGCACAACCTTTTCCTCACCAG...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTTCAGCGGACTAGGTaGAAGTGCTGGTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: SPLHLQRTRLKCWSAPLVLQRTR*KCWSAP
Trigger: AGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAG...GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCTGCCCACTGTCCCATaGACCGCAAGAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSALPTVP*TARKTL
Trigger: CAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAG...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp GGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTCTAATAAGGACAACATaGAGTCCACGTTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: GRHRCRRPRPGSGSESPPLIRTT*SPRFAS
Trigger: GCTAGCAAAACGTGGACTCAATGTTGTCCTTATTAG...AGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATTCCTCTTGCAGGGCCTaGGAAAATGCGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: RCRRPRPGSGSESPPRFHSSCRA*ENAHTN
Trigger: GTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGA...ATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp GAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGCTTTATATTCCTCTaGCAGGGCCTTGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: EGTAVEGPGRDQAQKARLCFIFL*QGLGKC
Trigger: GCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCA...AAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCCTGGTGAGGAAAAGGTaGTGCTGGACTCCTCACCGC +
Preference number: 5 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFLVRKR*CWTPHR
Trigger: GCGGTGAGGAGTCCAGCACAACCTTTTCCTCACCAG...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGGCTTGGGAGAAGGTTaGGAAGCATTCCGACATTGT +
Preference number: 5 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSGLGEG*EAFRHC
Trigger: ACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCC...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCGTTCAGGAAATGGCTaGGGAGAAGGTTTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSARSGNG*GEGLEA
Trigger: TGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACG...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp TTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCATTAGCTGTGTCATCTaGACTACGGAGGTGATGTTA +
Preference number: 5 (lower is better)
Translates to: LEGTAVEGPGRDQAQKARISCVI*TTEVML
Trigger: TAACATCACCTCCGTAGTCAAGATGACACAGCTAAT...GCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000648146.1
CDS-3UTR CAA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGTGCTTTATATTCCTCTaGCAGGGCCTTGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPCFIFL*QGLGKC
Trigger: GCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCA...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFCQEQP*EGTAVE
Trigger: TTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACA...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTTACCTGACCTTGGTGTaGAGCTTCAGGTATGCCACA +
Preference number: 5 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSYLTLV*SFRYAT
Trigger: TGTGGCATACCTGAAGCTCAACACCAAGGTCAGGTA...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp GGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTAGATACTTTGTCATaGCAGTCGAGACAGCATATG +
Preference number: 5 (lower is better)
Translates to: GRHRCRRPRPGSGSESPPLDTLS*QSRQHM
Trigger: CATATGCTGTCTCGACTGCAATGACAAAGTATCTAA...AGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp GGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAACCGCAAGAAAGACTTaGGCAAAACTTTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: GPGRDQAQKARQDFMGKATARKT*AKLSSS
Trigger: ACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGGT...TGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp AGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCTGCCCACTGTCCCATaGACCGCAAGAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: RLRKPAKISWARQPQVSPLPTVP*TARKTL
Trigger: CAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAG...AGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTGCGCACACAAACGCCTaGGAAGCTGAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPAHTNA*EAEYME
Trigger: CTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGC...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: QKARQDFMGKAATGFTSNCQEQP*EGTAVE
Trigger: TTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACA...ATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCCCTGGCTACCTGACCTaGGTGTTGAGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFPGYLT*VLSFRY
Trigger: ATACCTGAAGCTCAACACCAAGGTCAGGTAGCCAGG...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp AGCAGTCCAGGAGTGGTAAGAGCCTCTTCTGCCATATGCTGGATCTGTGGCATGCTGCCCACTGTCCCATaGACCGCAAGAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: SSPGVVRASSAICWICGMLPTVP*TARKTL
Trigger: CAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAG...CATGCCACAGATCCAGCATATGGCAGAAGAGGCTCTTACCACTCCTGGACTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp CCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGATTAGCTGTGTCATCTaGACTACGGAGGTGATGTTA +
Preference number: 5 (lower is better)
Translates to: PSPLHLQRTRLKCWSAPLISCVI*TTEVML
Trigger: TAACATCACCTCCGTAGTCAAGATGACACAGCTAAT...CAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp AGCAGTCCAGGAGTGGTAAGAGCCTCTTCTGCCATATGCTGGATCTGTGGCATGTCCTCTTGCAGGGCCTaGGAAAATGCGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: SSPGVVRASSAICWICGMSSCRA*ENAHTN
Trigger: GTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGA...CATGCCACAGATCCAGCATATGGCAGAAGAGGCTCTTACCACTCCTGGACTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp AGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCTGCTTTATATTCCTCTaGCAGGGCCTTGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: SPLHLQRTRLKCWSAPLVCFIFL*QGLGKC
Trigger: GCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCA...GACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp AGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTTACCTGACCTTGGTGTaGAGCTTCAGGTATGCCACA +
Preference number: 5 (lower is better)
Translates to: RLRKPAKISWARQPQVSPYLTLV*SFRYAT
Trigger: TGTGGCATACCTGAAGCTCAACACCAAGGTCAGGTA...AGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp CTCTGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTACCGCAAGAAAGACTTaGGCAAAACTTTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: LCDPSPLHLQRTRLKCWSTARKT*AKLSSS
Trigger: ACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGGT...AGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACAGAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCTAATAAGGACAACATaGAGTCCACGTTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSALIRTT*SPRFAS
Trigger: GCTAGCAAAACGTGGACTCAATGTTGTCCTTATTAG...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000375263.8
CDS-3UTR CAA 90 bp GCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCAAGATTTCATGCTAATAAGGACAACATaGAGTCCACGTTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: AVEGPGRDQAQKARQDFMLIRTT*SPRFAS
Trigger: GCTAGCAAAACGTGGACTCAATGTTGTCCTTATTAG...CATGAAATCTTGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS-3UTR CAA 90 bp TTTGGAAGGCACCGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGGGAAGCATTCCGACATaGTTGACTAAAATTCCAATT +
Preference number: 5 (lower is better)
Translates to: FGRHRCRRPRPGSGSESPGSIPT*LTKIPI
Trigger: AATTGGAATTTTAGTCAACAATGTCGGAATGCTTCC...CGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCGGTGCCTTCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000650005.1
CDS-3UTR CAA 90 bp GAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTGGGCTTGGGAGAAGGTTaGGAAGCATTCCGACATTGT +
Preference number: 5 (lower is better)
Translates to: ESPPRFHGQGSHRFHLQLGLGEG*EAFRHC
Trigger: ACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCC...CAATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CAA 90 bp GGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTTTGGAAGGCGGCTTGGGAGAAGGTTaGGAAGCATTCCGACATTGT +
Preference number: 5 (lower is better)
Translates to: GVELQVCHIVCQEQPLEGGLGEG*EAFRHC
Trigger: ACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCC...GCCTTCCAAAGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CCTGACCTTGGTGTTGAGCTTCAGGTATGCCACATAGTGTGTCAGGAGCAGCCTCGTTCAGGAAATGGCTaGGGAGAAGGTTTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: PDLGVELQVCHIVCQEQPRSGNG*GEGLEA
Trigger: TGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACG...AGGCTGCTCCTGACACACTATGTGGCATACCTGAAGCTCAACACCAAGGTCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648146.1
ENST00000650005.1
CDS-3UTR CAA 90 bp AAAATGCGCACACAAACGCCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCAAGGCGCACACAAACGCCTaGGAAGCTGAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: KMRTQTPWKLSTWSREAKAHTNA*EAEYME
Trigger: CTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGC...CTTGGCCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp TGGAAAATGCGCACACAAACGCCTTGGAAGCTGAGTACATGGAGTAGAGAGGCCCCTGGCTACCTGACCTaGGTGTTGAGCTTCAGGTAT +
Preference number: 5 (lower is better)
Translates to: WKMRTQTPWKLSTWSREAPGYLT*VLSFRY
Trigger: ATACCTGAAGCTCAACACCAAGGTCAGGTAGCCAGG...GGCCTCTCTACTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGCATTTTCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp CGCTGTAGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATTCAGAAAGCCCGCCTTaGTTTCATGTTTGTGTTTGT +
Preference number: 5 (lower is better)
Translates to: RCRRPRPGSGSESPPLFHSESPP*FHVCVC
Trigger: ACAAACACAAACATGAAACAAAGGCGGGCTTTCTGA...ATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCTACAGCG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp GGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCACCGCAAGAAAGACTTaGGCAAAACTTTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: GSESPPRFHGQGSHRFHLTARKT*AKLSSS
Trigger: ACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGGT...GAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TACGGTTTTTCAAAGGGAGCTACTCCATTCTCAGCTGGAGGAAGAGGGGTTAGCCTGCCCACTGTCCCATaGACCGCAAGAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: YGFSKGATPFSAGGRGVSLPTVP*TARKTL
Trigger: CAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAG...GCTAACCCCTCTTCCTCCAGCTGAGAATGGAGTAGCTCCCTTTGAAAAACCGTA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp ATGAGGCTCTGGATTTCATCCGGTGCGTTCAGGAAATGGCTTGGGAGAAGGTTTTCCTCTTGCAGGGCCTaGGAAAATGCGCACACAAAC +
Preference number: 5 (lower is better)
Translates to: MRLWISSGAFRKWLGRRFSSCRA*ENAHTN
Trigger: GTTTGTGTGCGCATTTTCCAAGGCCCTGCAAGAGGA...AAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGAGCCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp AGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTGTACCGCAAGAAAGACTTaGGCAAAACTTTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: RRPRPGSGSESPPLFHVCTARKT*AKLSSS
Trigger: ACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGGT...ACAAACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp TGTGACCCCAGCCCCCTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTGGAAGCATTCCGACATaGTTGACTAAAATTCCAATT +
Preference number: 5 (lower is better)
Translates to: CDPSPLHLQRTRLKCWSAGSIPT*LTKIPI
Trigger: AATTGGAATTTTAGTCAACAATGTCGGAATGCTTCC...AGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAGGGGGCTGGGGTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp CATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTTGCGGCTTGGGAGAAGGTTaGGAAGCATTCCGACATTGT +
Preference number: 5 (lower is better)
Translates to: HCSRDSIWGQHLDDDFFCGLGEG*EAFRHC
Trigger: ACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCC...GCAAAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CAA 90 bp AGGCAGAGGAGCAACCCTGGAACTTGCTTCTTGAAGAGACGTAGATTTGTGCCACGTTCAGGAAATGGCTaGGGAGAAGGTTTGGAAGCA +
Preference number: 5 (lower is better)
Translates to: RQRSNPGTCFLKRRRFVPRSGNG*GEGLEA
Trigger: TGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACG...TGGCACAAATCTACGTCTCTTCAAGAAGCAAGTTCCAGGGTTGCTCCTCTGCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp CTCCATCTTCAGCGGACTAGGTTGAAGTGCTGGTCTGCTCCTCTGGTCCTCTTCTTAGATACTTTGTCATaGCAGTCGAGACAGCATATG +
Preference number: 5 (lower is better)
Translates to: LHLQRTRLKCWSAPLVLFLDTLS*QSRQHM
Trigger: CATATGCTGTCTCGACTGCAATGACAAAGTATCTAA...GAAGAGGACCAGAGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAGATGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS-3UTR CAA 90 bp AGGCTCAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTTTAGATACTTTGTCATaGCAGTCGAGACAGCATATG +
Preference number: 5 (lower is better)
Translates to: RLRKPAKISWARQPQVSPLDTLS*QSRQHM
Trigger: CATATGCTGTCTCGACTGCAATGACAAAGTATCTAA...AGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTGAGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CTAAAGAACCATGAAGTGGGCAAAAGTGCATGTCTGAACGGTTTCATCACTCACGAGGAGTTCAGGAGTTaGGTGAGGATGTGCAGCAGC +
Preference number: 5 (lower is better)
Translates to: LKNHEVGKSACLNGFITHEEFRS*VRMCSS
Trigger: GCTGCTGCACATCCTCACCAAACTCCTGAACTCCTC...GTGAGTGATGAAACCGTTCAGACATGCACTTTTGCCCACTTCATGGTTCTTTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp TCTCAGCTGGAGGAAGAGGGGTTAGCCTATGTGAGTCCAGGAGAACAGAAAGACCCTGGAACTTGCTTCTaGAAGAGACGTAGATTTGTG +
Preference number: 5 (lower is better)
Translates to: SQLEEEGLAYVSPGEQKDPGTCF*KRRRFV
Trigger: CACAAATCTACGTCTCTTCAAGAAGCAAGTTCCAGG...GTCTTTCTGTTCTCCTGGACTCACATAGGCTAACCCCTCTTCCTCCAGCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp GTCCAGAGAGGAGTTCAGGAGTTTGGTGAGGATGTGCAGCAGCGCCCAAGCAGTCATTTCGCACATATATaGATCACATACCTTGACTAC +
Preference number: 5 (lower is better)
Translates to: VQRGVQEFGEDVQQRPSSHFAHI*ITYLDY
Trigger: GTAGTCAAGGTATGTGATCAATATATGTGCGAAATG...ACTGCTTGGGCGCTGCTGCACATCCTCACCAAACTCCTGAACTCCTCTCTGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp AGAAGGCCCAGGCCGGGATCAGGCTCAGAAAGCCCGCCTTTGTTTCATGTTTGTGGAAGCATTCCGACATaGTTGACTAAAATTCCAATT +
Preference number: 5 (lower is better)
Translates to: RRPRPGSGSESPPLFHVCGSIPT*LTKIPI
Trigger: AATTGGAATTTTAGTCAACAATGTCGGAATGCTTCC...ACAAACATGAAACAAAGGCGGGCTTTCTGAGCCTGATCCCGGCCTGGGCCTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS-3UTR CAA 90 bp TTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGCGCACACAAACGCCTaGGAAGCTGAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: LYLDTLSLQSRQHMGSAPAHTNA*EAEYME
Trigger: CTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGC...AGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTTGTCAGGAGCAGCCTTaGGAAGGCACCGCTGTAGAA +
Preference number: 5 (lower is better)
Translates to: LYLDTLSLQSRQHMGSAPCQEQP*EGTAVE
Trigger: TTCTACAGCGGTGCCTTCCAAAGGCTGCTCCTGACA...AGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CAGAAAGCCCGCCAAGATTTCATGGGCAAGGCAGCCACAGGTTTCACCTCCAATTTAGATACTTTGTCATaGCAGTCGAGACAGCATATG +
Preference number: 5 (lower is better)
Translates to: QKARQDFMGKAATGFTSNLDTLS*QSRQHM
Trigger: CATATGCTGTCTCGACTGCAATGACAAAGTATCTAA...ATTGGAGGTGAAACCTGTGGCTGCCTTGCCCATGAAATCTTGGCGGGCTTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TGTGGTTCGATTTCAAAGAATCCTGCTTCTACAGTGGATGGGCACAATTCTCCTGGCTTGGGAGAAGGTTaGGAAGCATTCCGACATTGT +
Preference number: 5 (lower is better)
Translates to: CGSISKNPASTVDGHNSPGLGEG*EAFRHC
Trigger: ACAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCC...AGGAGAATTGTGCCCATCCACTGTAGAAGCAGGATTCTTTGAAATCGAACCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp TGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGATGATGACTTCTTTTGCTTTATATTCCTCTaGCAGGGCCTTGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: CHCSRDSIWGQHLDDDFFCFIFL*QGLGKC
Trigger: GCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCA...AAAGAAGTCATCATCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CTGAGTACATGGAGTAGAGAGGCCAAGGAAACAGGGCTATCCCAGAAGAAATGTATTAGCTGTGTCATCTaGACTACGGAGGTGATGTTA +
Preference number: 5 (lower is better)
Translates to: LSTWSREAKETGLSQKKCISCVI*TTEVML
Trigger: TAACATCACCTCCGTAGTCAAGATGACACAGCTAAT...ACATTTCTTCTGGGATAGCCCTGTTTCCTTGGCCTCTCTACTCCATGTACTCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp ATGAGGCTCTGGATTTCATCCGGTGCGTTCAGGAAATGGCTTGGGAGAAGGTTTTTAGATACTTTGTCATaGCAGTCGAGACAGCATATG +
Preference number: 5 (lower is better)
Translates to: MRLWISSGAFRKWLGRRFLDTLS*QSRQHM
Trigger: CATATGCTGTCTCGACTGCAATGACAAAGTATCTAA...AAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGAGCCTCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp TCAGCTGGAGGAAGAGGGGTTAGCCTATGTGAGTCCAGGAGAACAGAAAGACAACACAATTCTCCTGAGTaGCCAAATTTCAAGTTACTA +
Preference number: 5 (lower is better)
Translates to: SAGGRGVSLCESRRTERQHNSPE*PNFKLL
Trigger: TAGTAACTTGAAATTTGGCAACTCAGGAGAATTGTG...TTGTCTTTCTGTTCTCCTGGACTCACATAGGCTAACCCCTCTTCCTCCAGCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp CTAAAGAACCATGAAGTGGGCAAAAGTGCATGTCTGAACGGTTTCATCACTCACCTAATAAGGACAACATaGAGTCCACGTTTTGCTAGC +
Preference number: 5 (lower is better)
Translates to: LKNHEVGKSACLNGFITHLIRTT*SPRFAS
Trigger: GCTAGCAAAACGTGGACTCAATGTTGTCCTTATTAG...GTGAGTGATGAAACCGTTCAGACATGCACTTTTGCCCACTTCATGGTTCTTTAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp TGGTTATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGCGCACACAAACGCCTaGGAAGCTGAGTACATGGAG +
Preference number: 5 (lower is better)
Translates to: WLSHLYLDTLSLQSRQHMAHTNA*EAEYME
Trigger: CTCCATGTACTCAGCTTCCAAGGCGTTTGTGTGCGC...CATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGATAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTTGCTTTATATTCCTCTaGCAGGGCCTTGGAAAATGC +
Preference number: 5 (lower is better)
Translates to: LYLDTLSLQSRQHMGSAPCFIFL*QGLGKC
Trigger: GCATTTTCCAAGGCCCTGCAAGAGGAATATAAAGCA...AGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TGGTTATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGCTTCAGCGGACTAGGTaGAAGTGCTGGTCTGCTCCT +
Preference number: 5 (lower is better)
Translates to: WLSHLYLDTLSLQSRQHMLQRTR*KCWSAP
Trigger: AGGAGCAGACCAGCACTTCAACCTAGTCCGCTGAAG...CATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGATAACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000467499.6
CDS-3UTR CAA 90 bp TGGTTATCACATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGCTGCCCACTGTCCCATaGACCGCAAGAAAGACTTTG +
Preference number: 5 (lower is better)
Translates to: WLSHLYLDTLSLQSRQHMLPTVP*TARKTL
Trigger: CAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAG...CATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATGTGATAACCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp CATTTGTATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCAACCGCAAGAAAGACTTaGGCAAAACTTTCCAGTAGT +
Preference number: 5 (lower is better)
Translates to: HLYLDTLSLQSRQHMGSATARKT*AKLSSS
Trigger: ACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGGT...TGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATACAAATG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000467499.6
ENST00000648332.1
ENST00000650005.1
CDS-3UTR CAA 90 bp TATTTAGATACTTTGTCATTGCAGTCGAGACAGCATATGGGGTCAGCACCTGGAGGAAGCATTCCGACATaGTTGACTAAAATTCCAATT +
Preference number: 5 (lower is better)
Translates to: YLDTLSLQSRQHMGSAPGGSIPT*LTKIPI
Trigger: AATTGGAATTTTAGTCAACAATGTCGGAATGCTTCC...TCCAGGTGCTGACCCCATATGCTGTCTCGACTGCAATGACAAAGTATCTAAATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000467499.6
ENST00000650005.1
CDS-3UTR CAA 90 bp TTCCAGCAAGCATGTACTAGCATCAAGAAACATCTGACTCCCATTCTGTCATTCTGTACCCACGTCATCTaGACTAGACATCAATTAAGA +
Preference number: 5 (lower is better)
Translates to: FQQACTSIKKHLTPILSFCTHVI*TRHQLR
Trigger: TCTTAATTGATGTCTAGTCAAGATGACGTGGGTACA...GAATGACAGAATGGGAGTCAGATGTTTCTTGATGCTAGTACATGCTTGCTGGAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS-3UTR CAA 90 bp GCACATATATTGATCACATACCTTGACTACGGAGGTGATGTTACAATGGATGAGGGAAGCATTCCGACATaGTTGACTAAAATTCCAATT +
Preference number: 5 (lower is better)
Translates to: AHILITYLDYGGDVTMDEGSIPT*LTKIPI
Trigger: AATTGGAATTTTAGTCAACAATGTCGGAATGCTTCC...CTCATCCATTGTAACATCACCTCCGTAGTCAAGGTATGTGATCAATATATGTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS CCA 72 bp TCCCCCATGGCTGCACTCAACAGACTGTTTCAGCCCTaGCCGTGGCTCTCTGTGTATGCCTCCTGGGACCAC +
Preference number: 6 (lower is better)
Translates to: SPMAALNRLFQP*PWLSVYASWDH
Trigger: GTGGTCCCAGGAGGCATACACAGAGAGCCACGGCCAGGGCTGAAACAGTCTGTTGAGTGCAGCCATGGGGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS GCA 72 bp GAGGATGAAGAACTGTTCCAGGACGTCCCCCATGGCTaGACTCAACAGACTGTTTCAGCCCTGGCCGTGGCT +
Preference number: 6 (lower is better)
Translates to: EDEELFQDVPHG*TQQTVSALAVA
Trigger: AGCCACGGCCAGGGCTGAAACAGTCTGTTGAGTGCAGCCATGGGGGACGTCCTGGAACAGTTCTTCATCCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000375263.8
ENST00000467499.6
CDS CCA 72 bp AGTGGTAAGAGCCTCTTCTGCCATATGCTGGATCTGTaGCATGCTGGAGCTGGCTTGCACTCACTCATAAGA +
Preference number: 6 (lower is better)
Translates to: SGKSLFCHMLDL*HAGAGLHSLIR
Trigger: TCTTATGAGTGAGTGCAAGCCAGCTCCAGCATGCCACAGATCCAGCATATGGCAGAAGAGGCTCTTACCACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS GCA 72 bp TTACACAGGACGATGGGATACCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGGGAGAAGGTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: LHRTMGYLDFIR*VQEMAWEKVWK
Trigger: CTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGGTATCCCATCGTCCTGTGTAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS GCA 72 bp GCTGGAGCTGGCTTGCACTCACTCATAAGAGCCCACTaGGATCATTCTCAGCAAACAAGATTTCATGGGCAA +
Preference number: 6 (lower is better)
Translates to: AGAGLHSLIRAH*DHSQQTRFHGQ
Trigger: TTGCCCATGAAATCTTGTTTGCTGAGAATGATCGCAGTGGGCTCTTATGAGTGAGTGCAAGCCAGCTCCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000648146.1
CDS GCA 72 bp TTCAGGATGAGACCTTTCTGCCTGGATTTCATCCGGTaGGTTCAGGAAATGGCTTGGGAGAAGGTTTGGAAG +
Preference number: 6 (lower is better)
Translates to: FRMRPFCLDFIR*VQEMAWEKVWK
Trigger: CTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGGCAGAAAGGTCTCATCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS CCA 72 bp TGGGATACCTGGATTTCATCCGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGAAGCATTCCGACATTG +
Preference number: 6 (lower is better)
Translates to: WDTWISSGAFRK*LGRRFGSIPTL
Trigger: CAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGGTATCCCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650386.1
CDS CCA 72 bp CTTTCTGCCTGGATTTCATCCGGTGCGTTCAGGAAATaGCTTGGGAGAAGGTTTGGAAGCATTCCGACATTG +
Preference number: 6 (lower is better)
Translates to: LSAWISSGAFRK*LGRRFGSIPTL
Trigger: CAATGTCGGAATGCTTCCAAACCTTCTCCCAAGCCATTTCCTGAACGCACCGGATGAAATCCAGGCAGAAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000650005.1
CDS CAA 72 bp TCTAGTTTTTCCAGCGTCCGGCTAATAAGGACAACATaGAGTCCACGTTTTGCTAGCTCGAACGAGTACGCT +
Preference number: 6 (lower is better)
Translates to: SSFSSVRLIRTT*SPRFASSNEYA
Trigger: AGCGTACTCGTTCGAGCTAGCAAAACGTGGACTCAATGTTGTCCTTATTAGCCGGACGCTGGAAAAACTAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000375262.4
ENST00000375263.8
ENST00000648146.1
ENST00000648799.1
ENST00000650005.1
ENST00000650386.1
CDS CAA 72 bp TCACTGCCCACTGTCCCATTGACCGCAAGAAAGACTTaGGCAAAACTTTCCAGTAGTTCAGTAAAACACATC +
Preference number: 6 (lower is better)
Translates to: SLPTVPLTARKT*AKLSSSSVKHI
Trigger: GATGTGTTTTACTGAACTACTGGAAAGTTTTGCCAAAGTCTTTCTTGCGGTCAATGGGACAGTGGGCAGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000375262.4
ENST00000375263.8
ENST00000467499.6
ENST00000648146.1
ENST00000648332.1
ENST00000648799.1
ENST00000650005.1
ENST00000650386.1
CDS TCA 72 bp GACTTTATATCCTCTCTGCATGTCTGCTTTGTAGTGTaGGTTACATTGGTGATTATGCACATTGTTGAGGTT +
Preference number: 6 (lower is better)
Translates to: DFISSLHVCFVV*VTLVIMHIVEV
Trigger: AACCTCAACAATGTGCATAATCACCAATGTAACTCACACTACAAAGCAGACATGCAGAGAGGATATAAAGTC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000484816.2