RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSD17B2 (Homo sapiens)

Ensembl gene IDs: ENSG00000086696

Ensembl transcript IDs: ENST00000199936.9, ENST00000563491.5, ENST00000566213.1, ENST00000566838.2, ENST00000568090.5, ENST00000569351.2

Found 488 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGGGTGAAGCCATACATGGAGAGCATGGCACTTAGAAGAGGCCCATaGAACCCAAGCCCTGCTGGGTGGACACTGAGAGCTGGAGAGCTC +
Preference number: 1 (lower is better)
Translates to: GVKPYMESMALRRGP*NPSPAGWTLRAGEL
Trigger: GAGCTCTCCAGCTCTCAGTGTCCACCCAGCAGGGCTTGGGTTGCATGGGCCTCTTCTAAGTGCCATGCTCTCCATGTATGGCTTCACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp TGCAACCCAAGCCCTGCTGGGTGGACACTGAGAGCTGGAGAGCTCTaGATGCATGACAACCCCTTCCCAACCCCCTGCACTAAGAGACTT +
Preference number: 1 (lower is better)
Translates to: CNPSPAGWTLRAGEL*MHDNPFPTPCTKRL
Trigger: AAGTCTCTTAGTGCAGGGGGTTGGGAAGGGGTTGTCATGCATCCAGAGCTCTCCAGCTCTCAGTGTCCACCCAGCAGGGCTTGGGTTGCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp CCATTTTTGAGCTGCGTTCCCACAGACCAAATACAACTCTACCATTaGGGGAGGGAGTGTGTGTCCCAGAAAGGTCCCGCTCAGAGCAGG +
Preference number: 1 (lower is better)
Translates to: PFLSCVPTDQIQLYH*GRECVSQKGPAQSR
Trigger: CCTGCTCTGAGCGGGACCTTTCTGGGACACACACTCCCTCCCTCAATGGTAGAGTTGTATTTGGTCTGTGGGAACGCAGCTCAAAAATGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp GGATGTCCCGCAGCACCGGAGAGAAGTCCTTGCTGGCTAACGAGTTaGTCAATAGGAGGAAATTCCGCTGTGCTAAGATGTAGTCCTGGC +
Preference number: 1 (lower is better)
Translates to: GCPAAPERSPCWLTS*SIGGNSAVLRCSPG
Trigger: GCCAGGACTACATCTTAGCACAGCGGAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGTGCTGCGGGACATCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 90 bp CAGAGCAGGCACCAGGGGACCAGGGTTCTAACCCAGTGTGGCCTCTaGTTGCTGATGACTTATAAGCCAACGCAATTCCTTTGTGAAAGG +
Preference number: 1 (lower is better)
Translates to: QSRHQGTRVLTQCGL*LLMTYKPTQFLCER
Trigger: CCTTTCACAAAGGAATTGCGTTGGCTTATAAGTCATCAGCAAGCAGAGGCCACACTGGGTTAGAACCCTGGTCCCCTGGTGCCTGCTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 90 bp GGGGATGAGCCCTTGCTAGCTTCGGTGACTCCTGGATATCAGGACTaGAGAGAAGGAGGGATGCTCACTTGGAAATGTAGGCCAGTGAAA +
Preference number: 1 (lower is better)
Translates to: GDEPLLASVTPGYQD*REGGMLTWKCRPVK
Trigger: TTTCACTGGCCTACATTTCCAAGTGAGCATCCCTCCTTCTCTGCAGTCCTGATATCCAGGAGTCACCGAAGCTAGCAAGGGCTCATCCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp CCCTCTCACCTCTGCAGTGACCCAGTGACCCAAAAGTCAGGTCGATaGATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTG +
Preference number: 1 (lower is better)
Translates to: PSHLCSDPVTQKSGR*IFPKLNKSPRNPSL
Trigger: CAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACTGCAGAGGTGAGAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR GCA 90 bp GCCAGATTACTTTCCAAAAAGCTTGCGGTCTCCCACGCTGTCTCCTaGAAAGTGCTTGGTTGTTCACATAGCTGTGGGGATGAGCCCTTG +
Preference number: 1 (lower is better)
Translates to: ARLLSKKLAVSHAVS*KVLGCSHSCGDEPL
Trigger: CAAGGGCTCATCCCCACAGCTATGTGAACAACCAAGCACTTTGCAGGAGACAGCGTGGGAGACCGCAAGCTTTTTGGAAAGTAATCTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp CCACTCTTGTGGGTAACCTATCCAGAGTCCCCAAAGCTGTCTCTGTaGGTGACAAAGCCATCAGCCTTTTGCCATCAGTCCGTCATCATC +
Preference number: 1 (lower is better)
Translates to: PLLWVTYPESPKLSL*VTKPSAFCHQSVII
Trigger: GATGATGACGGACTGATGGCAAAAGGCTGATGGCTTTGTCACTCACAGAGACAGCTTTGGGGACTCTGGATAGGTTACCCACAAGAGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 90 bp TGTTTCTCTGTCTCTGTGGGAAGACAGAATCTGGACTTCTTTAATTaGCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGACACTGATG +
Preference number: 1 (lower is better)
Translates to: CFSVSVGRQNLDFFN*QLADTAGPSAWTLM
Trigger: CATCAGTGTCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGATTCTGTCTTCCCACAGAGACAGAGAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 90 bp AGGGAGTCCCCAAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTaGATTTCTATCGCCCTGGTCCTGCCTGTCATCGTGTTGACCCAT +
Preference number: 1 (lower is better)
Translates to: RESPSWKPISRLHLL*ISIALVLPVIVLTH
Trigger: ATGGGTCAACACGATGACAGGCAGGACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTTGGGGACTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp AAGGATCAGACCTCTGTTTCTCTGTCTCTGTGGGAAGACAGAATCTaGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTG +
Preference number: 1 (lower is better)
Translates to: KDQTSVSLSLWEDRI*TSLIASWQTQLAPL
Trigger: CAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGATTCTGTCTTCCCACAGAGACAGAGAAACAGAGGTCTGATCCTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp AGGCAAATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTaGCGTGTAATAGGCAAAAGGGCTCTTCGCCAAGATAGCATGCTG +
Preference number: 1 (lower is better)
Translates to: RQIVSKADPQVSAFP*RVIGKRALRQDSML
Trigger: CAGCATGCTATCTTGGCGAAGAGCCCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTATTTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp ATCTCCTCTCCTCAATTCTCCTCCCAACCCAGGGAGTCCCCAAGTTaGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCC +
Preference number: 1 (lower is better)
Translates to: ISSPQFSSQPRESPS*KPISRLHLLCISIA
Trigger: GGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTTGGGGACTCCCTGGGTTGGGAGGAGAATTGAGGAGAGGAGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp CCCTGTCTTCGTGGGCTGACACCTCATTCTTCTTTAAACACCTCATaGAATTTCTGGCCACTCTTGTGGGTAACCTATCCAGAGTCCCCA +
Preference number: 1 (lower is better)
Translates to: PCLRGLTPHSSLNTS*NFWPLLWVTYPESP
Trigger: TGGGGACTCTGGATAGGTTACCCACAAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCACGAAGACAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp CGTGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTaGCCACTCTTGTGGGTAACCTATCCAGAGTCCCCAAAGCTGTCT +
Preference number: 1 (lower is better)
Translates to: RGLTPHSSLNTSWNF*PLLWVTYPESPKLS
Trigger: AGACAGCTTTGGGGACTCTGGATAGGTTACCCACAAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp ATGACTTATAAGCCAACGCAATTCCTTTGTGAAAGGAAGCAGGGGTaGAGCCATACATGGAGAGCATGGCACTTAGAAGAGGCCCATGCA +
Preference number: 1 (lower is better)
Translates to: MTYKPTQFLCERKQG*SHTWRAWHLEEAHA
Trigger: TGCATGGGCCTCTTCTAAGTGCCATGCTCTCCATGTATGGCTTCACCCCTGCTTCCTTTCACAAAGGAATTGCGTTGGCTTATAAGTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp CAGCCTGATATAAAAGGAAGAACCCAGGCACTGCATCTCAGGATCTaGTCTCAAATTTTCCACCATCACGGTGTACGTGGGATACCAGAT +
Preference number: 1 (lower is better)
Translates to: QPDIKGRTQALHLRI*SQIFHHHGVRGIPD
Trigger: ATCTGGTATCCCACGTACACCGTGATGGTGGAAAATTTGAGATCAGATCCTGAGATGCAGTGCCTGGGTTCTTCCTTTTATATCAGGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp CCCTCCCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATaGCCTGTATCAAAATCCCATCTCTGCCTCCTATCAGCTCTATGG +
Preference number: 1 (lower is better)
Translates to: PSHATLVLHTMKLLI*PVSKSHLCLLSALW
Trigger: CCATAGAGCTGATAGGAGGCAGAGATGGGATTTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGGGAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp AAAGCAGCCAGCCAAAACCCACCAAAATCAAGATGGCAACAACAGTaGCCTCTGGTCATCCTCACTGCTCATTATATGCTACTTATAATG +
Preference number: 1 (lower is better)
Translates to: KAASQNPPKSRWQQQ*PLVILTAHYMLLIM
Trigger: CATTATAAGTAGCATATAATGAGCAGTGAGGATGACCAGAGGTCACTGTTGTTGCCATCTTGATTTTGGTGGGTTTTGGCTGGCTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp GAATTTCCCATTGAACAGCTTTTAGCCAATCACTTCCCTATCCAATaGCCTTCCAGTTGTTCCTATAGGTTTCAGCATTTCAGGCACTGC +
Preference number: 1 (lower is better)
Translates to: EFPIEQLLANHFPIQ*PSSCSYRFQHFRHC
Trigger: GCAGTGCCTGAAATGCTGAAACCTATAGGAACAACTGGAAGGTCATTGGATAGGGAAGTGATTGGCTAAAAGCTGTTCAATGGGAAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 90 bp CACTGCTGCAGTAAATCGACTTTCACCACCTATTCGTTTTTACTTTaGCTTTATTTCTGTAGGCAAGAGTCCTCAAAGTACAGCCTGGTC +
Preference number: 1 (lower is better)
Translates to: HCCSKSTFTTYSFLL*LYFCRQESSKYSLV
Trigger: GACCAGGCTGTACTTTGAGGACTCTTGCCTACAGAAATAAAGCCAAAGTAAAAACGAATAGGTGGTGAAAGTCGATTTACTGCAGCAGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp CTTGTCAATGTCTATGGATTAAACCAGAGCAACAGAATTTCCCATTaGACAGCTTTTAGCCAATCACTTCCCTATCCAATGACCTTCCAG +
Preference number: 1 (lower is better)
Translates to: LVNVYGLNQSNRISH*TAFSQSLPYPMTFQ
Trigger: CTGGAAGGTCATTGGATAGGGAAGTGATTGGCTAAAAGCTGTTCAATGGGAAATTCTGTTGCTCTGGTTTAATCCATAGACATTGACAAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp ATTCCGTTGCATAAAAATGCCATGAATTATTTATCCACTATACTGTaGTGGGCACTGCGCTTATTTTCAACTGGGCCTTTAGAAATGCTG +
Preference number: 1 (lower is better)
Translates to: IPLHKNAMNYLSTIL*WALRLFSTGPLEML
Trigger: CAGCATTTCTAAAGGCCCAGTTGAAAATAAGCGCAGTGCCCATCACAGTATAGTGGATAAATAATTCATGGCATTTTTATGCAACGGAAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp AGTGTTGAAAACAGGTTGCCTGAAATGCTGACATTATTTGTAATGTaGGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCA +
Preference number: 1 (lower is better)
Translates to: SVENRLPEMLTLFVM*DFLYKSTNHVCWQS
Trigger: TGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACAAATAATGTCAGCATTTCAGGCAACCTGTTTTCAACACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR TCA 90 bp TATTGCCTACTCAGCTTACAGGGAACTGAACACAGTGTGTTAAATTaGCGAAGTGTTGAAAACAGGTTGCCTGAAATGCTGACATTATTT +
Preference number: 1 (lower is better)
Translates to: YCLLSLQGTEHSVLN*RSVENRLPEMLTLF
Trigger: AAATAATGTCAGCATTTCAGGCAACCTGTTTTCAACACTTCGTCAATTTAACACACTGTGTTCAGTTCCCTGTAAGCTGAGTAGGCAATA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR TCA 90 bp CTATTAAGTGGGCTGGATGTGACTCTACAAAGAAAAGCAAATAAATaGTCATTACAAAAAGTAAGAGGTGATTACCTATTGGGAGGTTGG +
Preference number: 1 (lower is better)
Translates to: LLSGLDVTLQRKANK*SLQKVRGDYLLGGW
Trigger: CCAACCTCCCAATAGGTAATCACCTCTTACTTTTTGTAATGATCATTTATTTGCTTTTCTTTGTAGAGTCACATCCAGCCCACTTAATAG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 90 bp TTTATTCAACAGTATATTTGTGACATTCATCCATGCACTGTGTGTTaGTTCTCCTTTCAGCATAGTATTCCGTTGCATAAAAATGCCATG +
Preference number: 1 (lower is better)
Translates to: FIQQYICDIHPCTVC*FSFQHSIPLHKNAM
Trigger: CATGGCATTTTTATGCAACGGAATACTATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACTGTTGAATAAA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTGAGGTTACAGTGAGCTaGGATCGCACCACTGCGCTC +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLEVTVS*DRTTAL
Trigger: GAGCGCAGTGGTGCGATCTCAGCTCACTGTAACCTC...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTGAAAGGAAGCAGGGGTaGAGCCATACATGGAGAGCA +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLERKQG*SHTWRA
Trigger: TGCTCTCCATGTATGGCTTCACCCCTGCTTCCTTTC...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTCTGGAGAGCTCTGGATaGATGACAACCCCTTCCCAA +
Preference number: 2 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGLESSG*MTTPSQ
Trigger: TTGGGAAGGGGTTGTCATGCATCCAGAGCTCTCCAG...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTGTCTTGCACCCCCTCTaGAACCTTAGGAGGTTCTCA +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLVLHPL*NLRRFS
Trigger: TGAGAACCTCCTAAGGTTGCAGAGGGGGTGCAAGAC...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTCCTGGATATCAGGACTaGAGAGAAGGAGGGATGCTC +
Preference number: 2 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGPGYQD*REGGML
Trigger: GAGCATCCCTCCTTCTCTGCAGTCCTGATATCCAGG...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCGGGCATGGTGGTGGGTaGCTGGAATCCCAGCTACCT +
Preference number: 2 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGGHGGG*LESQLP
Trigger: AGGTAGCTGGGATTCCAGGCACCCACCACCATGCCC...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTTCAGCCTTCTGCTCTTaGGCTTCTTGCCTTGAGAGA +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLSAFCS*ASCLER
Trigger: TCTCTCAAGGCAAGAAGCCCAAGAGCAGAAGGCTGA...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp GCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTaGCTGGCTAACGAGTTGATCAATAGGAGGAAATTCCGCTGTGCT +
Preference number: 2 (lower is better)
Translates to: AKIACWMSRSTGEKS*LANELINRRKFRCA
Trigger: AGCACAGCGGAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTATCATCTCCCACTTTTaGCAGACTCTCCCTACCCAT +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLIISHF*QTLPTH
Trigger: ATGGGTAGGGAGAGTCTGTCAAAAGTGGGAGATGAT...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCTACCCATCCCTCCCATaGCACTTTGGTGCTGCACAC +
Preference number: 2 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGYPSLP*HFGAAH
Trigger: GTGTGCAGCACCAAAGTGGCATGGGAGGGATGGGTA...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTAAGCCATCAGCCTTTTaGCATCAGTCCGTCATCATC +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLKPSAF*HQSVII
Trigger: GATGATGACGGACTGATGGCAAAAGGCTGATGGCTT...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTTACTGTGATGGGCACTaGGCTTATTTTCAACTGGGC +
Preference number: 2 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGYCDGH*AYFQLG
Trigger: GCCCAGTTGAAAATAAGCGCAGTGCCCATCACAGTA...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTAGGGAGTCCCCAAGTTaGAAACCCATCTCAAGACTT +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLRESPS*KPISRL
Trigger: AAGTCTTGAGATGGGTTTCCAACTTGGGGACTCCCT...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp AGCAGGCACCAGGGGACCAGGGTTCTAACCCAGTGTGGCCTCTGCTaGCTGATGACTTATAAGCCAACGCAATTCCTTTGTGAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: SRHQGTRVLTQCGLC*LMTYKPTQFLCERK
Trigger: CTTCCTTTCACAAAGGAATTGCGTTGGCTTATAAGTCATCAGCAAGCAGAGGCCACACTGGGTTAGAACCCTGGTCCCCTGGTGCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp TCCTGCAAAGTGCTTGGTTGTTCACATAGCTGTGGGGATGAGCCCTaGCTAGCTTCGGTGACTCCTGGATATCAGGACTGCAGAGAAGGA +
Preference number: 2 (lower is better)
Translates to: SCKVLGCSHSCGDEP*LASVTPGYQDCREG
Trigger: TCCTTCTCTGCAGTCCTGATATCCAGGAGTCACCGAAGCTAGCAAGGGCTCATCCCCACAGCTATGTGAACAACCAAGCACTTTGCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTTCAAAATCCCATCTCTaGCTCCTATCAGCTCTATGG +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLSKSHL*LLSALW
Trigger: CCATAGAGCTGATAGGAGGCAGAGATGGGATTTTGA...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTCAGCATTTCAGGCACTaGTGCAGTAAATCGACTTTC +
Preference number: 2 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLQHFRH*CSKSTF
Trigger: GAAAGTCGATTTACTGCAGCAGTGCCTGAAATGCTG...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp AGAGTCCCCAAAGCTGTCTCTGTGAGTGACAAAGCCATCAGCCTTTaGCCATCAGTCCGTCATCATCTCCCACTTTTGACAGACTCTCCC +
Preference number: 2 (lower is better)
Translates to: RVPKAVSVSDKAISL*PSVRHHLPLLTDSP
Trigger: GGGAGAGTCTGTCAAAAGTGGGAGATGATGACGGACTGATGGCAAAAGGCTGATGGCTTTGTCACTCACAGAGACAGCTTTGGGGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAGCTGGGCACAATGGTaGTTATCTCTAGTCCCAGCT +
Preference number: 2 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGSWAQW*LSLVPA
Trigger: AGCTGGGACTAGAGATAAGCACCATTGTGCCCAGCT...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTCCAAGCCCTGCTGGGTaGACACTGAGAGCTGGAGAG +
Preference number: 2 (lower is better)
Translates to: WADTSFFFKHLMEFLATLPSPAG*TLRAGE
Trigger: CTCTCCAGCTCTCAGTGTCCACCCAGCAGGGCTTGG...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp TCACCATTTCCCTCTTGTACCAGCTCTCAAGCAGCTTCCCTCTCTTaGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCT +
Preference number: 2 (lower is better)
Translates to: SPFPSCTSSQAASLS*YPSLSVQPAHLASP
Trigger: AGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAAGAGAGGGAAGCTGCTTGAGAGCTGGTACAAGAGGGAAATGGTGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTAGAGCTCTGGATGCATaGCAACCCCTTCCCAACCCC +
Preference number: 2 (lower is better)
Translates to: WADTSFFFKHLMEFLATLRALDA*QPLPNP
Trigger: GGGGTTGGGAAGGGGTTGTCATGCATCCAGAGCTCT...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAACATCGGTTAAATGTTTaGTGGCCCAGAACTGAAGAC +
Preference number: 2 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQHRLNV*WPRTED
Trigger: GTCTTCAGTTCTGGGCCATCAAACATTTAACCGATG...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp GGTCGATGGATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAAGTGTCATCACATCCTaGCCTAGCTGGATTGAGGCT +
Preference number: 2 (lower is better)
Translates to: GRWIFPKLNKSPRNPSLKSVITS*PSWIEA
Trigger: AGCCTCAATCCAGCTAGGTCAGGATGTGATGACACT...TTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCCATCGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR GCA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTATGCAACCCAAGCCCTaGTGGGTGGACACTGAGAGC +
Preference number: 2 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLMQPKP*WVDTES
Trigger: GCTCTCAGTGTCCACCCAGCAGGGCTTGGGTTGCAT...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAGACTTCATCTTCTCTaGATTTCTATCGCCCTGGTC +
Preference number: 2 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGRLHLL*ISIALV
Trigger: GACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCT...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAACTGTCTCCTGCAAAGTaGTTGGTTGTTCACATAGCT +
Preference number: 2 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQLSPAK*LVVHIA
Trigger: AGCTATGTGAACAACCAAGCACTTTGCAGGAGACAG...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATAGCTGGCAGACACAGCTaGCCCCTCTGCATGGACACT +
Preference number: 2 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIAGRHS*PLCMDT
Trigger: AGTGTCCATGCAGAGGGGCCAGCTGTGTCTGCCAGC...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAGAATGTATGGTAAGTaGGTGAGAACAGCTCTCCAG +
Preference number: 2 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGRMYGK*VRTALQ
Trigger: CTGGAGAGCTGTTCTCACCCACTTACCATACATTCT...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp AGAGAGACAAACTATCCAGTGTCATCACATCCTGACCTAGCTGGATaGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGC +
Preference number: 2 (lower is better)
Translates to: RETNYPVSSHPDLAG*RLLNTGDNLRVNNS
Trigger: GCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAATCCAGCTAGGTCAGGATGTGATGACACTGGATAGTTTGTCTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR CCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCCAACCCAAGCCCTGCTaGGTGGACACTGAGAGCTGG +
Preference number: 2 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSQPKPC*VDTESW
Trigger: CCAGCTCTCAGTGTCCACCCAGCAGGGCTTGGGTTG...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 90 bp ACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTTaGATGGCACAAACAGAGGGAAGGTATTGCCTACTCAGCTTACAG +
Preference number: 2 (lower is better)
Translates to: TLGTIFGLTIAGSFC*MAQTEGRYCLLSLQ
Trigger: CTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTTTGTGCCATCAAACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR CAA 90 bp CTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTaGTTTGATGGCACAAACAGAGGGAAGGTATTGCCTACTCAGCTT +
Preference number: 2 (lower is better)
Translates to: LNTGDNLRVNNSRQL*FDGTNRGKVLPTQL
Trigger: AAGCTGAGTAGGCAATACCTTCCCTCTGTTTGTGCCATCAAACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR GCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATCCCTTCCCAACCCCCTaGACTAAGAGACTTAACGAA +
Preference number: 2 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDPFPTP*TKRLNE
Trigger: TTCGTTAAGTCTCTTAGTGCAGGGGGTTGGGAAGGG...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAACACAGAAATTTAGCTaGGCACAATGGTGCTTATCT +
Preference number: 2 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQTQKFS*AQWCLS
Trigger: AGATAAGCACCATTGTGCCCAGCTAAATTTCTGTGT...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTATACAACTCTACCATTaGGGGAGGGAGTGTGTGTCC +
Preference number: 2 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLIQLYH*GRECVS
Trigger: GGACACACACTCCCTCCCTCAATGGTAGAGTTGTAT...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCTCAACAGTATATTTGTaGCATTCATCCATGCACTGT +
Preference number: 2 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGSTVYL*HSSMHC
Trigger: ACAGTGCATGGATGAATGTCACAAATATACTGTTGA...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp GGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTCCAGTAACAAATGGATaGGTTAGAAGGCAGATAAGA +
Preference number: 2 (lower is better)
Translates to: GCSTLGTIFGLTIAGSFCPVTNG*VRRQIR
Trigger: TCTTATCTGCCTTCTAACTCATCCATTTGTTACTGG...ACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR GCA 90 bp ATTGATCCAACAGTGAAGAGTGGTACTCCTCTATTTGAAGGCAGGATCCTAGGAACAGAGGGAAGGTATTaGCTACTCAGCTTACAGGGA +
Preference number: 2 (lower is better)
Translates to: IDPTVKSGTPLFEGRILGTEGRY*LLSLQG
Trigger: TCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGT...TCCTAGGATCCTGCCTTCAAATAGAGGAGTACCACTCTTCACTGTTGGATCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR CCA 90 bp GGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTACCAACCATGTGTGTTaGCAGTCACATTATAAAGAC +
Preference number: 2 (lower is better)
Translates to: GCSTLGTIFGLTIAGSFCTNHVC*QSHYKD
Trigger: GTCTTTATAATGTGACTGCCAACACACATGGTTGGT...ACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR TCA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTTATCCAAGACATCCCTaGGAGGTCCCTGACTTCCCT +
Preference number: 2 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSYPRHP*EVPDFP
Trigger: AGGGAAGTCAGGGACCTCTCAGGGATGTCTTGGATA...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATAAGCTACCTGGGAGGCTaGAGCAGGGAGAATTGCTTG +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSISYLGG*SRENCL
Trigger: CAAGCAATTCTCCCTGCTTCAGCCTCCCAGGTAGCT...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTGGTTCTAACCCAGTGTaGCCTCTGCTTGCTGATGAC +
Preference number: 2 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSGSNPV*PLLADD
Trigger: GTCATCAGCAAGCAGAGGCCACACTGGGTTAGAACC...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATAGAGGTGATTACCTATTaGGAGGTTGGAGAGGGCTGT +
Preference number: 2 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIEVITY*EVGEGC
Trigger: ACAGCCCTCTCCAACCTCCCAATAGGTAATCACCTC...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATATTTCTCTCCAGGATCTaGGAGCCATTCCTTTGGAAC +
Preference number: 2 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIFLSRI*EPFLWN
Trigger: GTTCCAAAGGAATGGCTCTCAGATCCTGGAGAGAAA...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATAGTTAGGGACCATTTTTaGGCTGCGTTCCCACAGACC +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSIVRDHF*AAFPQT
Trigger: GGTCTGTGGGAACGCAGCTCAAAAATGGTCCCTAAC...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATATTGATGGCCCAGAACTaGAGACTGAGCCTTGGGGTA +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSILMAQN*RLSLGV
Trigger: TACCCCAAGGCTCAGTCTTCAGTTCTGGGCCATCAA...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCCAGCTTACAGGGAACTaGACACAGTGTGTTAAATTG +
Preference number: 2 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVQLTGN*TQCVKL
Trigger: CAATTTAACACACTGTGTTCAGTTCCCTGTAAGCTG...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR-3UTR TCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCATTTGGCTTCACCTCTaGCCCATGTCTCTTCTCCAT +
Preference number: 2 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSIWLHL*PMSLLH
Trigger: ATGGAGAAGAGACATGGGTCAGAGGTGAAGCCAAAT...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATTTCCCAGAAAACTCATaGATAATCCACTCCTTGTCT +
Preference number: 2 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDFPENS*IIHSLS
Trigger: AGACAAGGAGTGGATTATTCATGAGTTTTCTGGGAA...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCACCCAGTGTGGCCTCTaGTTGCTGATGACTTATAAG +
Preference number: 2 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSTQCGL*LLMTYK
Trigger: CTTATAAGTCATCAGCAAGCAGAGGCCACACTGGGT...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATAGGACCATTTTTGAGCTaGGTTCCCACAGACCAAATA +
Preference number: 2 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIGPFLS*VPTDQI
Trigger: TATTTGGTCTGTGGGAACGCAGCTCAAAAATGGTCC...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATATCCCACGCTGTCTCCTaGAAAGTGCTTGGTTGTTCA +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSISHAVS*KVLGCS
Trigger: TGAACAACCAAGCACTTTGCAGGAGACAGCGTGGGA...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTCAGAGTTGTGGTGATTaGAGTATACATAGAAAGGGT +
Preference number: 2 (lower is better)
Translates to: WADTSFFFKHLMEFLATLQSCGD*SIHRKG
Trigger: ACCCTTTCTATGTATACTCCAATCACCACAACTCTG...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAAGCAATGTCCAGAAGTTaGTCTGTATGGTCTAAAAGG +
Preference number: 2 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKAMSRS*SVWSKR
Trigger: CCTTTTAGACCATACAGAGCAACTTCTGGACATTGC...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATATGCTCTTGGGCTTCTTaGCTTGAGAGAGCTCATCAA +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSICSWAS*LERAHQ
Trigger: TTGATGAGCTCTCTCAAGGCAAGAAGCCCAAGAGCA...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTCCCTCTCTTGGAATCTaGATCAGGAGCCCTTTTTGG +
Preference number: 2 (lower is better)
Translates to: MQYDLAIFISGHQKNLECPSLGI*IRSPFW
Trigger: CCAAAAAGGGCTCCTGATCCAGATTCCAAGAGAGGG...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATACATTTCAGGCACTGCTaGAGTAAATCGACTTTCACC +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSIHFRHC*SKSTFT
Trigger: GGTGAAAGTCGATTTACTGCAGCAGTGCCTGAAATG...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTAACCTTCTTGGCCAATaGCAGCAAAAGACTAATAAA +
Preference number: 2 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLNLLGQ*QQKTNK
Trigger: TTTATTAGTCTTTTGCTGCCATTGGCCAAGAAGGTT...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCTTTCTCACTGCAAGATaGGGCTATTATGATGCCTAC +
Preference number: 2 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSFLTAR*GYYDAY
Trigger: GTAGGCATCATAATAGCCCCATCTTGCAGTGAGAAA...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAAGACAGGAAAACTCTATaGTCTAGTCATTCTTTCAGA +
Preference number: 2 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKDRKTL*SSHSFR
Trigger: TCTGAAAGAATGACTAGATCATAGAGTTTTCCTGTC...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR TCA 90 bp AGTATATTTGTGACATTCATCCATGCACTGTGTGTTGATTCTCCTTTCAGCATAGAAAACAGGTTGGTATaGTTCAGTAAAGCTGAAGAC +
Preference number: 2 (lower is better)
Translates to: SIFVTFIHALCVDSPFSIENRLV*FSKAED
Trigger: GTCTTCAGCTTTACTGAATCATACCAACCTGTTTTC...TATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTGTAACAATTTCACTCTaGAGCATGTGTCATGGGAAA +
Preference number: 2 (lower is better)
Translates to: MQYDLAIFISGHQKNLECVTISL*SMCHGK
Trigger: TTTCCCATGACACATGCTGCAGAGTGAAATTGTTAC...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR GCA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTTCTGGTCATCCTCACTaGTCATTATATGCTACTTAT +
Preference number: 2 (lower is better)
Translates to: MQYDLAIFISGHQKNLECSGHPH*SLYATY
Trigger: ATAAGTAGCATATAATGAGCAGTGAGGATGACCAGA...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp AGCCCTGCTGGGTGGACACTGAGAGCTGGAGAGCTCTaGATGCATGACAACCCCTTCCCAACCCCCTGCACT +
Preference number: 3 (lower is better)
Translates to: SPAGWTLRAGEL*MHDNPFPTPCT
Trigger: AGTGCAGGGGGTTGGGAAGGGGTTGTCATGCATCCAGAGCTCTCCAGCTCTCAGTGTCCACCCAGCAGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTTGTGGGGATGAGCCCTaGCTAGCTTCGGTGACTCCT +
Preference number: 3 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLCGDEP*LASVTP
Trigger: AGGAGTCACCGAAGCTAGCAAGGGCTCATCCCCACA...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTAGGCGCTTGTCTCTGTaGGGAAGGATGGCCCTTTGC +
Preference number: 3 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGRRLSL*GRMALC
Trigger: GCAAAGGGCCATCCTTCCCAACAGAGACAAGCGCCT...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTCTGAAGCAGGGAGAATaGCTTGAACCCAGGAGGCAG +
Preference number: 3 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLLKQGE*LEPRRQ
Trigger: CTGCCTCCTGGGTTCAAGCAATTCTCCCTGCTTCAG...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp CCATACATGGAGAGCATGGCACTTAGAAGAGGCCCATaGAACCCAAGCCCTGCTGGGTGGACACTGAGAGCT +
Preference number: 3 (lower is better)
Translates to: PYMESMALRRGP*NPSPAGWTLRA
Trigger: AGCTCTCAGTGTCCACCCAGCAGGGCTTGGGTTGCATGGGCCTCTTCTAAGTGCCATGCTCTCCATGTATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTGTCCAACCAGCACATTaGGCTTCACCTCTGACCCAT +
Preference number: 3 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGVQPAH*ASPLTH
Trigger: ATGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGAC...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp GAGCCCATCCCTTTGGCTTCCCTCTCACCTCTGCAGTaGCCCAGTGACCCAAAAGTCAGGTCGATGGATCTT +
Preference number: 3 (lower is better)
Translates to: EPIPLASLSPLQ*PSDPKVRSMDL
Trigger: AAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACTGCAGAGGTGAGAGGGAAGCCAAAGGGATGGGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR TCA 72 bp AGCTGCGTTCCCACAGACCAAATACAACTCTACCATTaGGGGAGGGAGTGTGTGTCCCAGAAAGGTCCCGCT +
Preference number: 3 (lower is better)
Translates to: SCVPTDQIQLYH*GRECVSQKGPA
Trigger: AGCGGGACCTTTCTGGGACACACACTCCCTCCCTCAATGGTAGAGTTGTATTTGGTCTGTGGGAACGCAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp GTCTCTGTGGGAAGACAGAATCTGGACTTCTTTAATTaGCAGCTGGCAGACACAGCTGGCCCCTCTGCATGG +
Preference number: 3 (lower is better)
Translates to: VSVGRQNLDFFN*QLADTAGPSAW
Trigger: CCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGATTCTGTCTTCCCACAGAGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp AAAAGCTTGCGGTCTCCCACGCTGTCTCCTGCAAAGTaGTTGGTTGTTCACATAGCTGTGGGGATGAGCCCT +
Preference number: 3 (lower is better)
Translates to: KSLRSPTLSPAK*LVVHIAVGMSP
Trigger: AGGGCTCATCCCCACAGCTATGTGAACAACCAAGCACTTTGCAGGAGACAGCGTGGGAGACCGCAAGCTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCCCCTCCCATGCCACTTaGGTGCTGCACACAATGAAG +
Preference number: 3 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGPSHAT*VLHTMK
Trigger: CTTCATTGTGTGCAGCACCAAAGTGGCATGGGAGGG...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTAAAGCCATCAGCCTTTaGCCATCAGTCCGTCATCAT +
Preference number: 3 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGKAISL*PSVRHH
Trigger: ATGATGACGGACTGATGGCAAAAGGCTGATGGCTTT...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTAATTTCTGGCCACTCTaGTGGGTAACCTATCCAGAG +
Preference number: 3 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLNFWPL*WVTYPE
Trigger: CTCTGGATAGGTTACCCACAAGAGTGGCCAGAAATT...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp CACCAGGGGACCAGGGTTCTAACCCAGTGTGGCCTCTaGTTGCTGATGACTTATAAGCCAACGCAATTCCTT +
Preference number: 3 (lower is better)
Translates to: HQGTRVLTQCGL*LLMTYKPTQFL
Trigger: AAGGAATTGCGTTGGCTTATAAGTCATCAGCAAGCAGAGGCCACACTGGGTTAGAACCCTGGTCCCCTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp CCCTTGCTAGCTTCGGTGACTCCTGGATATCAGGACTaGAGAGAAGGAGGGATGCTCACTTGGAAATGTAGG +
Preference number: 3 (lower is better)
Translates to: PLLASVTPGYQD*REGGMLTWKCR
Trigger: CCTACATTTCCAAGTGAGCATCCCTCCTTCTCTGCAGTCCTGATATCCAGGAGTCACCGAAGCTAGCAAGGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp GTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTaGCGTGTAATAGGCAAAAGGGCTCTTCGCCAAGAT +
Preference number: 3 (lower is better)
Translates to: VSKADPQVSAFP*RVIGKRALRQD
Trigger: ATCTTGGCGAAGAGCCCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGCCTGACCTAGCTGGATaGAGGCTGCTCAACACTGGG +
Preference number: 3 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKPDLAG*RLLNTG
Trigger: CCCAGTGTTGAGCAGCCTCAATCCAGCTAGGTCAGG...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR TCA 72 bp TGGGTAACCTATCCAGAGTCCCCAAAGCTGTCTCTGTaGGTGACAAAGCCATCAGCCTTTTGCCATCAGTCC +
Preference number: 3 (lower is better)
Translates to: WVTYPESPKLSL*VTKPSAFCHQS
Trigger: GGACTGATGGCAAAAGGCTGATGGCTTTGTCACTCACAGAGACAGCTTTGGGGACTCTGGATAGGTTACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp CTTTCCAAAAAGCTTGCGGTCTCCCACGCTGTCTCCTaGAAAGTGCTTGGTTGTTCACATAGCTGTGGGGAT +
Preference number: 3 (lower is better)
Translates to: LSKKLAVSHAVS*KVLGCSHSCGD
Trigger: ATCCCCACAGCTATGTGAACAACCAAGCACTTTGCAGGAGACAGCGTGGGAGACCGCAAGCTTTTTGGAAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp AATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATaGACACTGATGGACCCTTGTACTTTTTCACTAATC +
Preference number: 3 (lower is better)
Translates to: NCQLADTAGPSA*TLMDPCTFSLI
Trigger: GATTAGTGAAAAAGTACAAGGGTCCATCAGTGTCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp CTTGAATCATCGGTTAAATGTTTGATGGCCCAGAACTaGAGACTGAGCCTTGGGGTAGGCTGCCTCTTCCCA +
Preference number: 3 (lower is better)
Translates to: LESSVKCLMAQN*RLSLGVGCLFP
Trigger: TGGGAAGAGGCAGCCTACCCCAAGGCTCAGTCTTCAGTTCTGGGCCATCAAACATTTAACCGATGATTCAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp GCAGCACCGGAGAGAAGTCCTTGCTGGCTAACGAGTTaGTCAATAGGAGGAAATTCCGCTGTGCTAAGATGT +
Preference number: 3 (lower is better)
Translates to: AAPERSPCWLTS*SIGGNSAVLRC
Trigger: ACATCTTAGCACAGCGGAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGTGCTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp CCAAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTaGATTTCTATCGCCCTGGTCCTGCCTGTCATCGTG +
Preference number: 3 (lower is better)
Translates to: PSWKPISRLHLL*ISIALVLPVIV
Trigger: CACGATGACAGGCAGGACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp GATCTGATCTCAAATTTTCCACCATCACGGTGTACGTaGGATACCAGATCCCCACCCAAGGGCATGTTATCC +
Preference number: 3 (lower is better)
Translates to: DLISNFPPSRCT*DTRSPPKGMLS
Trigger: GGATAACATGCCCTTGGGTGGGGATCTGGTATCCCACGTACACCGTGATGGTGGAAAATTTGAGATCAGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCCTGAGAGCCATTCCTTaGGAACTGAATCATCAAGGA +
Preference number: 3 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGLRAIP*ELNHQG
Trigger: TCCTTGATGATTCAGTTCCAAAGGAATGGCTCTCAG...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp AAGCCAACGCAATTCCTTTGTGAAAGGAAGCAGGGGTaGAGCCATACATGGAGAGCATGGCACTTAGAAGAG +
Preference number: 3 (lower is better)
Translates to: KPTQFLCERKQG*SHTWRAWHLEE
Trigger: CTCTTCTAAGTGCCATGCTCTCCATGTATGGCTTCACCCCTGCTTCCTTTCACAAAGGAATTGCGTTGGCTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATAATAAGGCCCTGTCCCTaGGATAACACCAGCCCCTCC +
Preference number: 3 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIIRPCP*DNTSPS
Trigger: GGAGGGGCTGGTGTTATCCAAGGGACAGGGCCTTAT...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAGGATTAGATAAGAGGTaGGCAGGATTGGTATCACAA +
Preference number: 3 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQGLDKR*AGLVSQ
Trigger: TTGTGATACCAATCCTGCCAACCTCTTATCTAATCC...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTCTGCCTGTCATCGTGTaGACCCATATCCCTTTCTCT +
Preference number: 3 (lower is better)
Translates to: WADTSFFFKHLMEFLATLLPVIV*THIPFS
Trigger: AGAGAAAGGGATATGGGTCAACACGATGACAGGCAG...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCGCAGGCAGCTTTTGTTaGATGGCACAAACAGAGGGA +
Preference number: 3 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVAGSFC*MAQTEG
Trigger: TCCCTCTGTTTGTGCCATCAAACAAAAGCTGCCTGC...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR TCA 72 bp TGGACACTGATGGACCCTTGTACTTTTTCACTAATCTaGCTTACTGAGCCATGCTTTCCCCTCTCCCTGGTT +
Preference number: 3 (lower is better)
Translates to: WTLMDPCTFSLI*LTEPCFPLSLV
Trigger: AACCAGGGAGAGGGGAAAGCATGGCTCAGTAAGTCAGATTAGTGAAAAAGTACAAGGGTCCATCAGTGTCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp ATAAAAGGAAGAACCCAGGCACTGCATCTCAGGATCTaGTCTCAAATTTTCCACCATCACGGTGTACGTGGG +
Preference number: 3 (lower is better)
Translates to: IKGRTQALHLRI*SQIFHHHGVRG
Trigger: CCCACGTACACCGTGATGGTGGAAAATTTGAGATCAGATCCTGAGATGCAGTGCCTGGGTTCTTCCTTTTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp GGACAGTTTATAAATGCCATGGCAATGTCCAGAAGTTaGTCTGTATGGTCTAAAAGGGGGAGGAACCCACAG +
Preference number: 3 (lower is better)
Translates to: GQFINAMAMSRS*SVWSKRGRNPQ
Trigger: CTGTGGGTTCCTCCCCCTTTTAGACCATACAGAGCAACTTCTGGACATTGCCATGGCATTTATAAACTGTCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp TCTTTAAACACCTCATGGAATTTCTGGCCACTCTTGTaGGTAACCTATCCAGAGTCCCCAAAGCTGTCTCTG +
Preference number: 3 (lower is better)
Translates to: SLNTSWNFWPLL*VTYPESPKLSL
Trigger: CAGAGACAGCTTTGGGGACTCTGGATAGGTTACCCACAAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp CACTATACTGTGATGGGCACTGCGCTTATTTTCAACTaGGCCTTTAGAAATGCTGCTGCCACAGACACTCAT +
Preference number: 3 (lower is better)
Translates to: HYTVMGTALIFN*AFRNAAATDTH
Trigger: ATGAGTGTCTGTGGCAGCAGCATTTCTAAAGGCCCAGTTGAAAATAAGCGCAGTGCCCATCACAGTATAGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATAATACAACTCTACCATaGAGGGAGGGAGTGTGTGTC +
Preference number: 3 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDNTTLP*REGVCV
Trigger: GACACACACTCCCTCCCTCAATGGTAGAGTTGTATT...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAACTAATGGATTATACATaGTTAAACAGGTTTGGGTGG +
Preference number: 3 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQLMDYT*LNRFGW
Trigger: CCACCCAAACCTGTTTAACAATGTATAATCCATTAG...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCCAGCATAGTATTCCGTaGCATAAAAATGCCATGAAT +
Preference number: 3 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGQHSIP*HKNAMN
Trigger: ATTCATGGCATTTTTATGCAACGGAATACTATGCTG...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp AAAGACACTTCCACCAGCACCAGGACAGTTTATAAATaGCATGGCAATGTCCAGAAGTTGCTCTGTATGGTC +
Preference number: 3 (lower is better)
Translates to: KDTSTSTRTVYK*HGNVQKLLCMV
Trigger: GACCATACAGAGCAACTTCTGGACATTGCCATGGCATTTATAAACTGTCCTGGTGCTGGTGGAAGTGTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp AGCTTTTGTTTGATGGCACAAACAGAGGGAAGGTATTaGCTACTCAGCTTACAGGGAACTGAACACAGTGTG +
Preference number: 3 (lower is better)
Translates to: SFCLMAQTEGRY*LLSLQGTEHSV
Trigger: CACACTGTGTTCAGTTCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTTTGTGCCATCAAACAAAAGCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR CCA 72 bp GTATCAAAATCCCATCTCTGCCTCCTATCAGCTCTATaGCTTTGGAACTTCCTTAACTTCTCTGAGCCTCCA +
Preference number: 3 (lower is better)
Translates to: VSKSHLCLLSAL*LWNFLNFSEPP
Trigger: TGGAGGCTCAGAGAAGTTAAGGAAGTTCCAAAGCCATAGAGCTGATAGGAGGCAGAGATGGGATTTTGATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCCAGGGAGTCCCCAAGTaGGAAACCCATCTCAAGACT +
Preference number: 3 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSQGVPK*ETHLKT
Trigger: AGTCTTGAGATGGGTTTCCAACTTGGGGACTCCCTG...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTAACCTAACTGCAGGATaGCTCTCTCGTCTAAATGGA +
Preference number: 3 (lower is better)
Translates to: WADTSFFFKHLMEFLATLNLTAG*LSRLNG
Trigger: TCCATTTAGACGAGAGAGCAATCCTGCAGTTAGGTT...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp CCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTaGGGGCTTCCATTGCCTAGGTGGCCTTTTTCTTGT +
Preference number: 3 (lower is better)
Translates to: PFHFKTMTFRLL*GLPLPRWPFSC
Trigger: ACAAGAAAAAGGCCACCTAGGCAATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCCAGTGTGGCCTCTGCTaGCTGATGACTTATAAGCCA +
Preference number: 3 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSQCGLC*LMTYKP
Trigger: TGGCTTATAAGTCATCAGCAAGCAGAGGCCACACTG...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTTTACCTATTGGGAGGTaGGAGAGGGCTGTGATGGTA +
Preference number: 3 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSLPIGR*ERAVMV
Trigger: TACCATCACAGCCCTCTCCAACCTCCCAATAGGTAA...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGGTGTACTATTTGTTCTaGGAAACAGAGAGAGACAAA +
Preference number: 3 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKVYYLF*ETERDK
Trigger: TTTGTCTCTCTCTGTTTCCAAGAACAAATAGTACAC...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR TCA 72 bp GCCACTTTGGTGCTGCACACAATGAAGTTATTGATATaGCCTGTATCAAAATCCCATCTCTGCCTCCTATCA +
Preference number: 3 (lower is better)
Translates to: ATLVLHTMKLLI*PVSKSHLCLLS
Trigger: TGATAGGAGGCAGAGATGGGATTTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp CTCAGCTTACAGGGAACTGAACACAGTGTGTTAAATTaGCGAAGTGTTGAAAACAGGTTGCCTGAAATGCTG +
Preference number: 3 (lower is better)
Translates to: LSLQGTEHSVLN*RSVENRLPEML
Trigger: CAGCATTTCAGGCAACCTGTTTTCAACACTTCGTCAATTTAACACACTGTGTTCAGTTCCCTGTAAGCTGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR GCA 72 bp CTGGATCAGGAGCCCTTTTTGGTAACAATTTCACTCTaGAGCATGTGTCATGGGAAAATTCAAGCACACAAA +
Preference number: 3 (lower is better)
Translates to: LDQEPFLVTISL*SMCHGKIQAHK
Trigger: TTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAATTGTTACCAAAAAGGGCTCCTGATCCAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp TCCAGTTGTTCCTATAGGTTTCAGCATTTCAGGCACTaGTGCAGTAAATCGACTTTCACCACCTATTCGTTT +
Preference number: 3 (lower is better)
Translates to: SSCSYRFQHFRH*CSKSTFTTYSF
Trigger: AAACGAATAGGTGGTGAAAGTCGATTTACTGCAGCAGTGCCTGAAATGCTGAAACCTATAGGAACAACTGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp AAGATGGCAACAACAGTGACCTCTGGTCATCCTCACTaGTCATTATATGCTACTTATAATGCATTAGCATGC +
Preference number: 3 (lower is better)
Translates to: KMATTVTSGHPH*SLYATYNALAC
Trigger: GCATGCTAATGCATTATAAGTAGCATATAATGAGCAGTGAGGATGACCAGAGGTCACTGTTGTTGCCATCTT
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTTGTCTAATCAGAATATaGAGTGAAAGAAGCCAGACA +
Preference number: 3 (lower is better)
Translates to: WADTSFFFKHLMEFLATLCLIRI*SERSQT
Trigger: TGTCTGGCTTCTTTCACTCAATATTCTGATTAGACA...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTTCCAAAAACCCTCTCTaGGAATCTGGATCAGGAGCC +
Preference number: 3 (lower is better)
Translates to: MQYDLAIFISGHQKNLECSKNPL*ESGSGA
Trigger: GGCTCCTGATCCAGATTCCAAGAGAGGGTTTTTGGA...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR-3UTR CAA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTGTGTTGGAATTCTCTTaGGGCTGTGTCACCAAACAC +
Preference number: 3 (lower is better)
Translates to: MQYDLAIFISGHQKNLECVLEFS*GCVTKH
Trigger: GTGTTTGGTGACACAGCCCAAAGAGAATTCCAACAC...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp AAAATCATGGCATATTCACAGAATACTGCACAGCAATaGAATGAGTGGACTACAGCTACACACAGTGCAGAT +
Preference number: 3 (lower is better)
Translates to: KIMAYSQNTAQQ*NEWTTATHSAD
Trigger: ATCTGCACTGTGTGTAGCTGTAGTCCACTCATTTCATTGCTGTGCAGTATTCTGTGAATATGCCATGATTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp ATTGAACAGCTTTTAGCCAATCACTTCCCTATCCAATaGCCTTCCAGTTGTTCCTATAGGTTTCAGCATTTC +
Preference number: 3 (lower is better)
Translates to: IEQLLANHFPIQ*PSSCSYRFQHF
Trigger: GAAATGCTGAAACCTATAGGAACAACTGGAAGGTCATTGGATAGGGAAGTGATTGGCTAAAAGCTGTTCAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR GCA 72 bp AGTTGTTCCTATAGGTTTCAGCATTTCAGGCACTGCTaGAGTAAATCGACTTTCACCACCTATTCGTTTTTA +
Preference number: 3 (lower is better)
Translates to: SCSYRFQHFRHC*SKSTFTTYSFL
Trigger: TAAAAACGAATAGGTGGTGAAAGTCGATTTACTGCAGCAGTGCCTGAAATGCTGAAACCTATAGGAACAACT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp CCTTTCAGCATAGTATTCCGTTGCATAAAAATGCCATaGATTATTTATCCACTATACTGTGATGGGCACTGC +
Preference number: 3 (lower is better)
Translates to: PFSIVFRCIKMP*IIYPLYCDGHC
Trigger: GCAGTGCCCATCACAGTATAGTGGATAAATAATTCATGGCATTTTTATGCAACGGAATACTATGCTGAAAGG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CCA 72 bp AAATTCTTTCTCACACAAGATCCAAAAACCCTCTCTTaGAATCTGGATCAGGAGCCCTTTTTGGTAACAATT +
Preference number: 3 (lower is better)
Translates to: KFFLTQDPKTLS*NLDQEPFLVTI
Trigger: AATTGTTACCAAAAAGGGCTCCTGATCCAGATTCCAAGAGAGGGTTTTTGGATCTTGTGTGAGAAAGAATTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp CATAAAAATGCCATGAATTATTTATCCACTATACTGTaGTGGGCACTGCGCTTATTTTCAACTGGGCCTTTA +
Preference number: 3 (lower is better)
Translates to: HKNAMNYLSTIL*WALRLFSTGPL
Trigger: TAAAGGCCCAGTTGAAAATAAGCGCAGTGCCCATCACAGTATAGTGGATAAATAATTCATGGCATTTTTATG
38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR TCA 72 bp CAGTATATTTGTGACATTCATCCATGCACTGTGTGTTaGTTCTCCTTTCAGCATAGTATTCCGTTGCATAAA +
Preference number: 3 (lower is better)
Translates to: QYICDIHPCTVC*FSFQHSIPLHK
Trigger: TTTATGCAACGGAATACTATGCTGAAAGGAGAATCAACACACAGTGCATGGATGAATGTCACAAATATACTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTCTGAGATCGCACCACTaGGCTCCAGCCTGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGLRSHH*APAWVR
Trigger: TCTCACCCAGGCTGGAGCGCAGTGGTGCGATCTCAG...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTTGCCAGCCTTTCCATTaGGGCCCCTCCTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLCQPFH*GPSSHA
Trigger: AGCATGGGAGGAGGGGCCCCAATGGAAAGGCTGGCA...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTTCTGCACTGGCTTCGTaGTGTCCATTTGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGSALAS*CPFGAP
Trigger: CGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGA...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTAGCTACCTGGGAGGCTaGAGCAGGGAGAATTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLSYLGG*SRENCL
Trigger: CAAGCAATTCTCCCTGCTTCAGCCTCCCAGGTAGCT...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTTACCCATCCCTCCCATaGCACTTTGGTGCTGCACAC +
Preference number: 4 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLYPSLP*HFGAAH
Trigger: GTGTGCAGCACCAAAGTGGCATGGGAGGGATGGGTA...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp AGCTTGCGGTCTCCCACGCTGTCTCCTGCAAAGTGCTaGGTTGTTCACATAGCTGTGGGGATGAGCCCTTGC +
Preference number: 4 (lower is better)
Translates to: SLRSPTLSPAKC*VVHIAVGMSPC
Trigger: GCAAGGGCTCATCCCCACAGCTATGTGAACAACCAAGCACTTTGCAGGAGACAGCGTGGGAGACCGCAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTTATCCAAGACATCCCTaGGAGGTCCCTGACTTCCCT +
Preference number: 4 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGYPRHP*EVPDFP
Trigger: AGGGAAGTCAGGGACCTCTCAGGGATGTCTTGGATA...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTTCCCTGAGAGGTCCCTaGCTTCCCTTTCCTGAAATA +
Preference number: 4 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGSLRGP*LPFPEI
Trigger: TATTTCAGGAAAGGGAAGTCAGGGACCTCTCAGGGA...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTGAGGGGTTCAATGTGTaGTCTGTCAGACCAAGAGGA +
Preference number: 4 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGEGFNV*SVRPRG
Trigger: TCCTCTTGGTCTGACAGAGCACACATTGAACCCCTC...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAACCTCAGCGGGGAGGTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQTSAGR*SRMSFS
Trigger: GGAGAAGGACATTCTGGACCACCTCCCCGCTGAGGT...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAGCCAAGATAGCATGCTaGATGTCCCGCAGCACCGGA +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQAKIAC*MSRSTG
Trigger: TCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGC...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCATTCGGGAGACTGAAGTaGGAGGACCCCTCGAGCCCA +
Preference number: 4 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPFGRLK*EDPSSP
Trigger: TGGGCTCGAGGGGTCCTCCCACTTCAGTCTCCCGAA...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp TCCAGCACAGTTTCTAGCAGCATAAGGCCCTGTCCCTaGGATAACACCAGCCCCTCCCTAAAATGCCTGCCT +
Preference number: 4 (lower is better)
Translates to: SSTVSSSIRPCP*DNTSPSLKCLP
Trigger: AGGCAGGCATTTTAGGGAGGGGCTGGTGTTATCCAAGGGACAGGGCCTTATGCTGCTAGAAACTGTGCTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp GTGCTTGGTTGTTCACATAGCTGTGGGGATGAGCCCTaGCTAGCTTCGGTGACTCCTGGATATCAGGACTGC +
Preference number: 4 (lower is better)
Translates to: VLGCSHSCGDEP*LASVTPGYQDC
Trigger: GCAGTCCTGATATCCAGGAGTCACCGAAGCTAGCAAGGGCTCATCCCCACAGCTATGTGAACAACCAAGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ATCTGGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGAAGCCTCCCGAGTAGCTaGGATTACAGGCATCACCAA +
Preference number: 4 (lower is better)
Translates to: IWTSLIASWQTQLAPLHGSLPSS*DYRHHQ
Trigger: TTGGTGATGCCTGTAATCCCAGCTACTCGGGAGGCT...TCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp GCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTaGCTGGCTAACGAGTTGATCAATAGGAGGAAATTC +
Preference number: 4 (lower is better)
Translates to: ACWMSRSTGEKS*LANELINRRKF
Trigger: GAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GGTCGATGGATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAACACCTCCCATGCTGCTaGCATTCACCAGCCTCCCTT +
Preference number: 4 (lower is better)
Translates to: GRWIFPKLNKSPRNPSLKHLPCC*HSPASL
Trigger: AAGGGAGGCTGGTGAATGTCAGCAGCATGGGAGGTG...TTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCCATCGACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp TTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTCTCTCACCTCTGCAGTaGCCCAGTGACCCAAAAGTC +
Preference number: 4 (lower is better)
Translates to: LRLLNTGDNLRVNNSRQLLSPLQ*PSDPKV
Trigger: GACTTTTGGGTCACTGGGTCACTGCAGAGGTGAGAG...AAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAATTGATGGCCCAGAACTaGAGACTGAGCCTTGGGGTA +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQLMAQN*RLSLGV
Trigger: TACCCCAAGGCTCAGTCTTCAGTTCTGGGCCATCAA...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTAGACTTCATCTTCTCTaGATTTCTATCGCCCTGGTC +
Preference number: 4 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGRLHLL*ISIALV
Trigger: GACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCT...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTCTGTCTCCTGCAAAGTaGTTGGTTGTTCACATAGCT +
Preference number: 4 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLLSPAK*LVVHIA
Trigger: AGCTATGTGAACAACCAAGCACTTTGCAGGAGACAG...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp GGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTAAGCTCCCCATCAGTTaGAAAGCCAAGCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: GCSTLGTIFGLTIAGSFCKLPIS*KAKHPS
Trigger: GCTGGGGTGCTTGGCTTTCCAACTGATGGGGAGCTT...ACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAGCATTCTTAGAGCTCTaGGCATGGGCTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQAFLEL*AWACLG
Trigger: GCCAAGACAAGCCCATGCCCAGAGCTCTAAGAATGC...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ATCTGGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGAAGCTTCGGTGACTCCTaGATATCAGGACTGCAGAGA +
Preference number: 4 (lower is better)
Translates to: IWTSLIASWQTQLAPLHGSFGDS*ISGLQR
Trigger: TCTCTGCAGTCCTGATATCCAGGAGTCACCGAAGCT...TCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCACATTCCGACTTCTTTaGGGGCTTCCATTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGTFRLL*GLPLPR
Trigger: CCTAGGCAATGGAAGCCCTCAAAGAAGTCGGAATGT...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTATGAGCCATGTCTTGTaGTGGGCACCCCATGACCAT +
Preference number: 4 (lower is better)
Translates to: GCSTLGTIFGLTIAGSFCMSHVL*WAPHDH
Trigger: ATGGTCATGGGGTGCCCATCACAAGACATGGCTCAT...ACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGCTTCCCTCTCACCTCTaGAGTGACCCAGTGACCCAA +
Preference number: 4 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKLPSHL*SDPVTQ
Trigger: TTGGGTCACTGGGTCACTGCAGAGGTGAGAGGGAAG...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCCCCTTCCCAACCCCCTaGACTAAGAGACTTAACGAA +
Preference number: 4 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGPFPTP*TKRLNE
Trigger: TTCGTTAAGTCTCTTAGTGCAGGGGGTTGGGAAGGG...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCCGGGCAAAGGCTGGCTaGAGGCAGCCTGAGTTCTGT +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASRAKAG*RQPEFC
Trigger: ACAGAACTCAGGCTGCCTCCAGCCAGCCTTTGCCCG...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCCCAAGCCCTGCTGGGTaGACACTGAGAGCTGGAGAG +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASPSPAG*TLRAGE
Trigger: CTCTCCAGCTCTCAGTGTCCACCCAGCAGGGCTTGG...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp CAGGGGACCAGGGTTCTAACCCAGTGTGGCCTCTGCTaGCTGATGACTTATAAGCCAACGCAATTCCTTTGT +
Preference number: 4 (lower is better)
Translates to: QGTRVLTQCGLC*LMTYKPTQFLC
Trigger: ACAAAGGAATTGCGTTGGCTTATAAGTCATCAGCAAGCAGAGGCCACACTGGGTTAGAACCCTGGTCCCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp CGCAGCACCGGAGAGAAGTCCTTGCTGGCTAACGAGTaGATCAATAGGAGGAAATTCCGCTGTGCTAAGATG +
Preference number: 4 (lower is better)
Translates to: RSTGEKSLLANE*INRRKFRCAKM
Trigger: CATCTTAGCACAGCGGAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGTGCTGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTGGATCTTCCCTAAACTaGACAAGAGCCCAAGGAACC +
Preference number: 4 (lower is better)
Translates to: LRLLNTGDNLRVNNSRQLGSSLN*TRAQGT
Trigger: GGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCC...AAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAAAGAGCTCTGGATGCATaGCAACCCCTTCCCAACCCC +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQRALDA*QPLPNP
Trigger: GGGGTTGGGAAGGGGTTGTCATGCATCCAGAGCTCT...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCGAGGTTACAGTGAGCTaGGATCGCACCACTGCGCTC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASEVTVS*DRTTAL
Trigger: GAGCGCAGTGGTGCGATCTCAGCTCACTGTAACCTC...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAAAGCTATTCGGGAGACTaGAGTGGGAGGACCCCTCGA +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQSYSGD*SGRTPR
Trigger: TCGAGGGGTCCTCCCACTTCAGTCTCCCGAATAGCT...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAAGGGAGTCCCCAAGTTaGAAACCCATCTCAAGACTT +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQRESPS*KPISRL
Trigger: AAGTCTTGAGATGGGTTTCCAACTTGGGGACTCCCT...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCACCAAAAACCCTCTCTTaGAATCTGGATCAGGAGCCC +
Preference number: 4 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPPKTLS*NLDQEP
Trigger: GGGCTCCTGATCCAGATTCCAAGAGAGGGTTTTTGG...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTGCAATCCCAGCACTTTaGGAGGCCCAGGTAGGTGGA +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGAIPAL*EAQVGG
Trigger: TCCACCTACCTGGGCCTCCCAAAGTGCTGGGATTGC...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp AACTATCCAGTGTCATCACATCCTGACCTAGCTGGATaGAGGCTGCTCAACACTGGGGACAATCTTCGGGTT +
Preference number: 4 (lower is better)
Translates to: NYPVSSHPDLAG*RLLNTGDNLRV
Trigger: AACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAATCCAGCTAGGTCAGGATGTGATGACACTGGATAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp TTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTACCAGGACTGCCTTCTaGTCCACAGGTAACAATTCT +
Preference number: 4 (lower is better)
Translates to: LRLLNTGDNLRVNNSRQLTRTAF*STGNNS
Trigger: AGAATTGTTACCTGTGGATCAGAAGGCAGTCCTGGT...AAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp GGTCGATGGATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAACCACATAGAATGCCATaGGCCATGTCTTGTGATGGG +
Preference number: 4 (lower is better)
Translates to: GRWIFPKLNKSPRNPSLKPHRMP*AMSCDG
Trigger: CCCATCACAAGACATGGCTCATGGCATTCTATGTGG...TTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCCATCGACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATTGGCCAGGCTGGTCTTaGACTCCTGACCTCAATTGG +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDWPGWS*TPDLNW
Trigger: CCAATTGAGGTCAGGAGTTCAAGACCAGCCTGGCCA...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGACTGCACAGAGGCCTaGCAGGCAGACCATCCAGCT +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRDCTEA*QADHPA
Trigger: AGCTGGATGGTCTGCCTGGCAGGCCTCTGTGCAGTC...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp ATCTGGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGAAGAAGTTCACGGCCATaGATTGTTTGTAGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: IWTSLIASWQTQLAPLHGRSSRP*IVCSQS
Trigger: TGACTGACTACAAACAATGCATGGCCGTGAACTTCT...TCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGAACCCTGCCTTTGCATaGCCTGCATTTTTGTTCGCC +
Preference number: 4 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKNPAFA*PAFLFA
Trigger: GGCGAACAAAAATGCAGGGCATGCAAAGGCAGGGTT...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGCCAGAAAAGAGGGCATaGTATGACACGCATGGGCAT +
Preference number: 4 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKPEKRA*YDTHGH
Trigger: ATGCCCATGCGTGTCATAGCATGCCCTCTTTTCTGG...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGGGCATGGTGGTGGGTaGCTGGAATCCCAGCTACCT +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRGHGGG*LESQLP
Trigger: AGGTAGCTGGGATTCCAGGCACCCACCACCATGCCC...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTCCCACATAGTACTGTaGGGACAGCCAGGCAGATCC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASSHIVL*GQPGRS
Trigger: GGATCTGCCTGGCTGTCCCCACAGTACTATGTGGGA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTTCGTGATGTCCATTTaGAGCACCGAGAGGCGCGGA +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASFVMSI*STERRG
Trigger: TCCGCGCCTCTCGGTGCTCCAAATGGACATCACGAA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCAAGCTCCCCATCAGTTaGAAAGCCAAGCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASKLPIS*KAKHPS
Trigger: GCTGGGGTGCTTGGCTTTCCAACTGATGGGGAGCTT...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTAAGCTCCCCATCAGTTaGAAAGCCAAGCACCCCAGC +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGKLPIS*KAKHPS
Trigger: GCTGGGGTGCTTGGCTTTCCAACTGATGGGGAGCTT...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTGCCAGCCTTTCCATTaGGGCCCCTCCTCCCATGCT +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHCQPFH*GPSSHA
Trigger: AGCATGGGAGGAGGGGCCCCAATGGAAAGGCTGGCA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAACAACCCAAGCCCTGCTaGGTGGACACTGAGAGCTGG +
Preference number: 4 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKQPKPC*VDTESW
Trigger: CCAGCTCTCAGTGTCCACCCAGCAGGGCTTGGGTTG...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCACATACATGGAGAGCATaGCACTTAGAAGAGGCCCAT +
Preference number: 4 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPHTWRA*HLEEAH
Trigger: ATGGGCCTCTTCTAAGTGCCATGCTCTCCATGTATG...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAAGAAGTTGCTCTGTATaGTCTAAAAGGGGGAGGAAC +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQRSCSV*SKRGRN
Trigger: GTTCCTCCCCCTTTTAGACCATACAGAGCAACTTCT...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTCTCCGGCAAATACCGTaGAGCCCAGCTCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRALRQIP*SPAHPD
Trigger: ATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAG...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCTGCACTGGCTTCGTaGTGTCCATTTGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRASALAS*CPFGAP
Trigger: CGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGA...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR TCA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCAGCAAAAACGTCTTTGTaGCCTCCACAGTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPAKTSL*PPQFQR
Trigger: TCTTTGGAACTGTGGAGGTCACAAAGACGTTTTTGC...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp ATTGATCCAACAGTGAAGAGTGGTACTCCTCTATTTGAAGGCAGGATCCTAGGATCTGCAGTGACCCAGTaGCCCAAAAGTCAGGTCGAT +
Preference number: 4 (lower is better)
Translates to: IDPTVKSGTPLFEGRILGSAVTQ*PKSQVD
Trigger: ATCGACCTGACTTTTGGGTCACTGGGTCACTGCAGA...TCCTAGGATCCTGCCTTCAAATAGAGGAGTACCACTCTTCACTGTTGGATCAAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCCCTCCAGAGTTGAAGTaGTTCTCTTGCCTCAGCCTC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASPPELK*FSCLSL
Trigger: GAGGCTGAGGCAAGAGAATCACTTCAACTCTGGAGG...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTGCTGCACCTTCAAGTaGTCAGGGCCAGTGAGTCTA +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASCCTFK*SGPVSL
Trigger: TAGACTCACTGGCCCTGAGCACTTGAAGGTGCAGCA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTTCGCCAAGATAGCATaGTGGATGTCCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAFAKIA*WMSRST
Trigger: GGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAA...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTTTCGCCAAGATAGCATaGTGGATGTCCCGCAGCACC +
Preference number: 4 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLFAKIA*WMSRST
Trigger: GGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAA...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAGCAATGTCCAGAAGTTaGTCTGTATGGTCTAAAAGG +
Preference number: 4 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQAMSRS*SVWSKR
Trigger: CCTTTTAGACCATACAGAGCAACTTCTGGACATTGC...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ATCTGGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGAAGGACAGTTTATAAATaGCATGGCAATGTCCAGAAG +
Preference number: 4 (lower is better)
Translates to: IWTSLIASWQTQLAPLHGRTVYK*HGNVQK
Trigger: CTTCTGGACATTGCCATGGCATTTATAAACTGTCCT...TCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCACATTTCAGGCACTGCTaGAGTAAATCGACTTTCACC +
Preference number: 4 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPHFRHC*SKSTFT
Trigger: GGTGAAAGTCGATTTACTGCAGCAGTGCCTGAAATG...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAACCTCAGCGGGGAGGTaGTCCAGAATGTCCTTCTCC +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSTSAGR*SRMSFS
Trigger: GGAGAAGGACATTCTGGACCACCTCCCCGCTGAGGT...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCCAAGATAGCATGCTaGATGTCCCGCAGCACCGGA +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRAKIAC*MSRSTG
Trigger: TCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGC...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAATCTTTAATTGCCAGCTaGCAGACACAGCTGGCCCCT +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQSLIAS*QTQLAP
Trigger: AGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGA...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATGGTTCTAACCCAGTGTaGCCTCTGCTTGCTGATGAC +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDGSNPV*PLLADD
Trigger: GTCATCAGCAAGCAGAGGCCACACTGGGTTAGAACC...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTGCATTTCTATCGCCCTaGTCCTGCCTGTCATCGTGT +
Preference number: 4 (lower is better)
Translates to: WADTSFFFKHLMEFLATLAFLSP*SCLSSC
Trigger: ACACGATGACAGGCAGGACCAGGGCGATAGAAATGC...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAACCATCACGGTGTACGTaGGATACCAGATCCCCACCC +
Preference number: 4 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKPSRCT*DTRSPP
Trigger: GGGTGGGGATCTGGTATCCCACGTACACCGTGATGG...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ATCTGGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGATCTTTAAACACCTCATaGAATTTCTGGCCACTCTTG +
Preference number: 4 (lower is better)
Translates to: IWTSLIASWQTQLAPLHGSLNTS*NFWPLL
Trigger: CAAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGA...TCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTGTAATCTCAGCACTTTaGGAGGCCCAGGAAGGGGAA +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGVISAL*EAQEGE
Trigger: TTCCCCTTCCTGGGCCTCCCAAAGTGCTGAGATTAC...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACACTCCGGCAAATACCGTaGAGCCCAGCTCATCCAGAT +
Preference number: 4 (lower is better)
Translates to: CNVRFPVQIYQPCVLAVTLRQIP*SPAHPD
Trigger: ATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAG...TGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGGCAAAAACGTCTTTGTaGCCTCCACAGTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKAKTSL*PPQFQR
Trigger: TCTTTGGAACTGTGGAGGTCACAAAGACGTTTTTGC...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp AGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGAGGGTATATACAATTTaGCTAATCCTGACCCAACCC +
Preference number: 4 (lower is better)
Translates to: RLLNTGDNLRVNNSRQLLRVYTI*LILTQP
Trigger: GGGTTGGGTCAGGATTAGTCAAATTGTATATACCCT...CAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCAGTGTCATCACATCCTaGCCTAGCTGGATTGAGGCT +
Preference number: 4 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVSVITS*PSWIEA
Trigger: AGCCTCAATCCAGCTAGGTCAGGATGTGATGACACT...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCTTCCCAGAAAACTCATaGATAATCCACTCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGFPENS*IIHSLS
Trigger: AGACAAGGAGTGGATTATTCATGAGTTTTCTGGGAA...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTCCAAAGCTGTCTCTGTaGGTGACAAAGCCATCAGCC +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAPKLSL*VTKPSA
Trigger: GGCTGATGGCTTTGTCACTCACAGAGACAGCTTTGG...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCAGGGAGAATTGCTTaGACCCAGGAGGCAGAGGTT +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRAGRIA*TQEAEV
Trigger: AACCTCTGCCTCCTGGGTTCAAGCAATTCTCCCTGC...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTCTGGTCTTGAACTCCTaGCCTCAATTGGTCCACCTG +
Preference number: 4 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLLVLNS*PQLVHL
Trigger: CAGGTGGACCAATTGAGGTCAGGAGTTCAAGACCAG...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTCTGTCCTGCAGCATTaGTGCAACCTTGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASSVLQH*CNLAVS
Trigger: GCTTACAGCAAGGTTGCAGCAATGCTGCAGGACAGA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp AAACAGAGGGAAGGTATTGCCTACTCAGCTTACAGGGAACTGAACACAGTGTGTACCCAACCCTGCCTTTaGATGCCCTGCATTTTTGTT +
Preference number: 4 (lower is better)
Translates to: KQREGIAYSAYRELNTVCTQPCL*MPCIFV
Trigger: AACAAAAATGCAGGGCATGCAAAGGCAGGGTTGGGT...ACACACTGTGTTCAGTTCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp AAACAGAGGGAAGGTATTGCCTACTCAGCTTACAGGGAACTGAACACAGTGTGTACAGAGGGAAGGTATTaGCTACTCAGCTTACAGGGA +
Preference number: 4 (lower is better)
Translates to: KQREGIAYSAYRELNTVCTEGRY*LLSLQG
Trigger: TCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGT...ACACACTGTGTTCAGTTCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTGAAGAACCCAGGCACTaGATCTCAGGATCTGATCTC +
Preference number: 4 (lower is better)
Translates to: WADTSFFFKHLMEFLATLEEPRH*ISGSDL
Trigger: GAGATCAGATCCTGAGATGCAGTGCCTGGGTTCTTC...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATAGCTGGGCACAATGGTaGTTATCTCTAGTCCCAGCT +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDSWAQW*LSLVPA
Trigger: AGCTGGGACTAGAGATAAGCACCATTGTGCCCAGCT...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATCCACCACGCCTGGCCTaGAAACGCCTTTTAAAATGT +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDPPRLA*KRLLKC
Trigger: ACATTTTAAAAGGCGTTTGCAGGCCAGGCGTGGTGG...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTACTTGCACAAAGCATaGCCAAGCCCGCAATCACCA +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASYLHKA*PSPQSP
Trigger: TGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CCA 90 bp ATTGATCCAACAGTGAAGAGTGGTACTCCTCTATTTGAAGGCAGGATCCTAGGATACTTGCACAAAGCATaGCCAAGCCCGCAATCACCA +
Preference number: 4 (lower is better)
Translates to: IDPTVKSGTPLFEGRILGYLHKA*PSPQSP
Trigger: TGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTA...TCCTAGGATCCTGCCTTCAAATAGAGGAGTACCACTCTTCACTGTTGGATCAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CCA 90 bp GGATTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGATCTTTTATCTGCACTaGCTTCGTGATGTCCATTTG +
Preference number: 4 (lower is better)
Translates to: GLRLLNTGDNLRVNNSRQIFYLH*LRDVHL
Trigger: CAAATGGACATCACGAAGCCAGTGCAGATAAAAGAT...CTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAATCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTGCATTCTTAGAGCTCTaGGCATGGGCTTGTCTTGGC +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAAFLEL*AWACLG
Trigger: GCCAAGACAAGCCCATGCCCAGAGCTCTAAGAATGC...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp AGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGCAAAAGTCAGGTCGATaGATCTTCCCTAAACTGAAC +
Preference number: 4 (lower is better)
Translates to: RLLNTGDNLRVNNSRQLLQKSGR*IFPKLN
Trigger: GTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTG...CAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTGAGGTGATTACCTATTaGGAGGTTGGAGAGGGCTGT +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGEVITY*EVGEGC
Trigger: ACAGCCCTCTCCAACCTCCCAATAGGTAATCACCTC...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp AAAGCTGTCTCTGTGAGTGACAAAGCCATCAGCCTTTaGCCATCAGTCCGTCATCATCTCCCACTTTTGACA +
Preference number: 4 (lower is better)
Translates to: KAVSVSDKAISL*PSVRHHLPLLT
Trigger: TGTCAAAAGTGGGAGATGATGACGGACTGATGGCAAAAGGCTGATGGCTTTGTCACTCACAGAGACAGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp GGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTaGTTTGATGGCACAAACAGAGGGAAGGTATTGCCT +
Preference number: 4 (lower is better)
Translates to: GDNLRVNNSRQL*FDGTNRGKVLP
Trigger: AGGCAATACCTTCCCTCTGTTTGTGCCATCAAACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp AATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATCTGCACTGGCTTCGTaGTGTCCATTTGGAGCACCG +
Preference number: 4 (lower is better)
Translates to: NVRFPVQIYQPCVLAVTLSALAS*CPFGAP
Trigger: CGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGA...TAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTACATTCCGACTTCTTTaGGGGCTTCCATTGCCTAGG +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRATFRLL*GLPLPR
Trigger: CCTAGGCAATGGAAGCCCTCAAAGAAGTCGGAATGT...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTATACAACTCTACCATTaGGGGAGGGAGTGTGTGTCC +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAIQLYH*GRECVS
Trigger: GGACACACACTCCCTCCCTCAATGGTAGAGTTGTAT...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTGTTAGGGACCATTTTTaGGCTGCGTTCCCACAGACC +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIVRDHF*AAFPQT
Trigger: GGTCTGTGGGAACGCAGCTCAAAAATGGTCCCTAAC...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAAATTTGGCTTCACCTCTaGCCCATGTCTCTTCTCCAT +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQIWLHL*PMSLLH
Trigger: ATGGAGAAGAGACATGGGTCAGAGGTGAAGCCAAAT...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTCTCTGCCTCCAGAGTTaGAGTGATTCTCTTGCCTCA +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRALCLQS*SDSLAS
Trigger: TGAGGCAAGAGAATCACTTCAACTCTGGAGGCAGAG...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCTGTCCTGCAGCATTaGTGCAACCTTGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRASVLQH*CNLAVS
Trigger: GCTTACAGCAAGGTTGCAGCAATGCTGCAGGACAGA...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCTTCGCCCACATAGAATaGCATGAGCCATGTCTTGTG +
Preference number: 4 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVFAHIE*HEPCLV
Trigger: CACAAGACATGGCTCATGGCATTCTATGTGGGCGAA...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAAACCCAGTGTGGCCTCTaGTTGCTGATGACTTATAAG +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQTQCGL*LLMTYK
Trigger: CTTATAAGTCATCAGCAAGCAGAGGCCACACTGGGT...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAAGTCTTGCACCCCCTCTaGAACCTTAGGAGGTTCTCA +
Preference number: 4 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKVLHPL*NLRRFS
Trigger: TGAGAACCTCCTAAGGTTGCAGAGGGGGTGCAAGAC...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTCTCTCAGGCTTAAGTaGAGTGGTGTGATCTCAGCT +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASSLRLK*SGVISA
Trigger: AGCTGAGATCACACCACTGCACTTAAGCCTGAGAGA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTTAGAGCTCTGGGCATaGGCTTGTCTTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASLELWA*ACLGQN
Trigger: ATTTTGGCCAAGACAAGCCCATGCCCAGAGCTCTAA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTTCTGGCCACTCTTGTaGGTAACCTATCCAGAGTCC +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAFWPLL*VTYPES
Trigger: GGACTCTGGATAGGTTACCCACAAGAGTGGCCAGAA...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATCTGTCCCTGTCTTCGTaGGCTGACACCTCATTCTTC +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHLSLSS*ADTSFF
Trigger: GAAGAATGAGGTGTCAGCCCACGAAGACAGGGACAG...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAGGTGCCTGCGATATCTaGGGTGAAAGGAAAGGGAAG +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSGACDI*GERKGK
Trigger: CTTCCCTTTCCTTTCACCCCAGATATCGCAGGCACC...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp TCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTaGTGGGTAACCTATCCAGAGTCCCCAAAGCTGTCT +
Preference number: 4 (lower is better)
Translates to: SSLNTSWNFWPL*WVTYPESPKLS
Trigger: AGACAGCTTTGGGGACTCTGGATAGGTTACCCACAAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTAGTGCTCATTCTCAGTaGCTTGCTGCACCTTCAAGT +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRASAHSQ*LAAPSS
Trigger: ACTTGAAGGTGCAGCAAGTCACTGAGAATGAGCACT...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTACCAGGACTGCCTTCTaGTCCACAGGTAACAATTCT +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRATRTAF*STGNNS
Trigger: AGAATTGTTACCTGTGGATCAGAAGGCAGTCCTGGT...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR TCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAATGCTGGCTAACGAGTTaGTCAATAGGAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQCWLTS*SIGGNS
Trigger: GGAATTTCCTCCTATTGATCAACTCGTTAGCCAGCA...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGAGATGGCAACAACAGTaGCCTCTGGTCATCCTCACT +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRRWQQQ*PLVILT
Trigger: AGTGAGGATGACCAGAGGTCACTGTTGTTGCCATCT...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTATCATCTCCCACTTTTaGCAGACTCTCCCTACCCAT +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAIISHF*QTLPTH
Trigger: ATGGGTAGGGAGAGTCTGTCAAAAGTGGGAGATGAT...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTCCATGCACTGTGTGTTaGTTCTCCTTTCAGCATAGT +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGPCTVC*FSFQHS
Trigger: ACTATGCTGAAAGGAGAATCAACACACAGTGCATGG...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTTCTCAGTGACTTGCTaGACCTTCAAGTGCTCAGGG +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHFSVTC*TFKCSG
Trigger: CCCTGAGCACTTGAAGGTGCAGCAAGTCACTGAGAA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTGTCCGAGAAGAAAGTaGTCATTCTCAGTGACTTGC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASCPRRK*SFSVTC
Trigger: GCAAGTCACTGAGAATGAGCACTTTCTTCTCGGACA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATAGCCAGGCAGATCCATaGTGTGTCCGAGAAGAAAGT +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHSQADP*CVREES
Trigger: ACTTTCTTCTCGGACACAGCATGGATCTGCCTGGCT...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGATCCAGCTCCACAGCTaGCCTGAGCTCTTCTTGTAT +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRIQLHS*PELFLY
Trigger: ATACAAGAAGAGCTCAGGGCAGCTGTGGAGCTGGAT...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAGCTCATCCAGATACTTaGACAAAGCATGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSAHPDT*TKHGQA
Trigger: GGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGC...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp TGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACAGCTCATCCAGATACTTaGACAAAGCATGGCCAAGCC +
Preference number: 4 (lower is better)
Translates to: CNVRFPVQIYQPCVLAVTAHPDT*TKHGQA
Trigger: GGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGC...TGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTCCCACTTGTCACTGGTaGCTGCGATATTTGTTAGGA +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAPTCHW*LRYLLG
Trigger: TCCTAACAAATATCGCAGGCACCAGTGACAAGTGGG...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTTTTGAGGGCTTCCATTaGCTAGGTGGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: WADTSFFFKHLMEFLATLFEGFH*LGGLFL
Trigger: AAGAAAAAGGCCACCTAGGCAATGGAAGCCCTCAAA...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAACCTTTCTCTGAGTCTTaGACCCCCTCTGCAACCTTA +
Preference number: 4 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKPFSES*TPSATL
Trigger: TAAGGTTGCAGAGGGGGTGCAAGACTCAGAGAAAGG...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGAATGAGAATGAGACCTaGTGGGCTGCATTCCCTGGA +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRNENET*WAAFPG
Trigger: TCCAGGGAATGCAGCCCAGCAGGTCTCATTCTCATT...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTCAAAATCCCATCTCTaGCTCCTATCAGCTCTATGG +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASSKSHL*LLSALW
Trigger: CCATAGAGCTGATAGGAGGCAGAGATGGGATTTTGA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAAGCAGAGAAGGAGGGATaGTCACTTGGAAATGTAGGC +
Preference number: 4 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKAEKEG*SLGNVG
Trigger: GCCTACATTTCCAAGTGAGCATCCCTCCTTCTCTGC...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCCCTGGATATCAGGACTaGAGAGAAGGAGGGATGCTC +
Preference number: 4 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSPGYQD*REGGML
Trigger: GAGCATCCCTCCTTCTCTGCAGTCCTGATATCCAGG...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTTCCCACGCTGTCTCCTaGAAAGTGCTTGGTTGTTCA +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASISHAVS*KVLGCS
Trigger: TGAACAACCAAGCACTTTGCAGGAGACAGCGTGGGA...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCCAGCATTTCAGGCACTaGTGCAGTAAATCGACTTTC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASQHFRH*CSKSTF
Trigger: GAAAGTCGATTTACTGCAGCAGTGCCTGAAATGCTG...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCCCACGAGTTGGAGGATaGAGTGAGCTATTATATGAC +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASPRVGG*SELLYD
Trigger: GTCATATAATAGCTCACTGCATCCTCCAACTCGTGG...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGTAAGCGCCTTTCCCTaGCGTGTAATAGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRVSAFP*RVIGKR
Trigger: CCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTAC...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATGTAAGCGCCTTTCCCTaGCGTGTAATAGGCAAAAGG +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHVSAFP*RVIGKR
Trigger: CCTTTTGCCTATTACACGCCAGGGAAAGGCGCTTAC...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTGGCATGGGCTTGTCTTaGCCAAAATGTCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGGMGLS*PKCLLA
Trigger: TGCTAAAAGACATTTTGGCCAAGACAAGCCCATGCC...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp GGATTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGTGTACTATTTGTTCTTaGAAACAGAGAGAGACAAAC +
Preference number: 4 (lower is better)
Translates to: GLRLLNTGDNLRVNNSRQCTICS*KQRETN
Trigger: GTTTGTCTCTCTCTGTTTCCAAGAACAAATAGTACA...CTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATAGAATGTATGGTAAGTaGGTGAGAACAGCTCTCCAG +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDRMYGK*VRTALQ
Trigger: CTGGAGAGCTGTTCTCACCCACTTACCATACATTCT...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATCAGCCTTCTGCTCTTaGGCTTCTTGCCTTGAGAGA +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSSAFCS*ASCLER
Trigger: TCTCTCAAGGCAAGAAGCCCAAGAGCAGAAGGCTGA...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCATGGTGGTGGGTGCCTaGAATCCCAGCTACCTGGGA +
Preference number: 4 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSMVVGA*NPSYLG
Trigger: TCCCAGGTAGCTGGGATTCCAGGCACCCACCACCAT...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCTTTCCCACTTGTCACTaGTGCCTGCGATATCTGGGG +
Preference number: 4 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSFPTCH*CLRYLG
Trigger: CCCCAGATATCGCAGGCACCAGTGACAAGTGGGAAA...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp AGAAGCATTTCTCTCCAGGATCTGAGAGCCATTCCTTaGGAACTGAATCATCAAGGATCAGACCTCTGTTTC +
Preference number: 4 (lower is better)
Translates to: RSISLQDLRAIP*ELNHQGSDLCF
Trigger: GAAACAGAGGTCTGATCCTTGATGATTCAGTTCCAAAGGAATGGCTCTCAGATCCTGGAGAGAAATGCTTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp ACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTTaGATGGCACAAACAGAGGGAAGGTATTGCCTACTC +
Preference number: 4 (lower is better)
Translates to: TIFGLTIAGSFC*MAQTEGRYCLL
Trigger: GAGTAGGCAATACCTTCCCTCTGTTTGTGCCATCAAACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTGCAAAAACGTCTTTGTaGCCTCCACAGTTCCAAAGA +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAAKTSL*PPQFQR
Trigger: TCTTTGGAACTGTGGAGGTCACAAAGACGTTTTTGC...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR TCA 90 bp TGTGTTGGCAGTCACATTATAAAGACATATAAGAACCCTAAATCCCCAGTAACAGTGATGGGCACCCCATaGCCATGTGTGAAAATGCTG +
Preference number: 4 (lower is better)
Translates to: CVGSHIIKTYKNPKSPVTVMGTP*PCVKML
Trigger: CAGCATTTTCACACATGGTCATGGGGTGCCCATCAC...TGTTACTGGGGATTTAGGGTTCTTATATGTCTTTATAATGTGACTGCCAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ATTGATCCAACAGTGAAGAGTGGTACTCCTCTATTTGAAGGCAGGATCCTAGGACAGCTTACAGGGAACTaGACACAGTGTGTTAAATTG +
Preference number: 4 (lower is better)
Translates to: IDPTVKSGTPLFEGRILGQLTGN*TQCVKL
Trigger: CAATTTAACACACTGTGTTCAGTTCCCTGTAAGCTG...TCCTAGGATCCTGCCTTCAAATAGAGGAGTACCACTCTTCACTGTTGGATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATATTTCACCCCTTTAACTaGTCTCTGGCTGTGCTCATC +
Preference number: 4 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIFHPFN*SLAVLI
Trigger: GATGAGCACAGCCAGAGATCAGTTAAAGGGGTGAAA...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTACTGTCAGCAGTTACTaGATCAAACCTGTTTTCACC +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGTVSSY*IKPVFT
Trigger: GGTGAAAACAGGTTTGATTCAGTAACTGCTGACAGT...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTTGGGCTTCTTGCCTTaGGAGAGCTCATCAAATAGC +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHLGFLP*ESSSNS
Trigger: GCTATTTGATGAGCTCTCTCAAGGCAAGAAGCCCAA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAGTCATTCTCCAAACATaGGTTCTCAGCCTTCTGCTC +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSVILQT*VLSLLL
Trigger: GAGCAGAAGGCTGAGAACTCATGTTTGGAGAATGAC...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCGAGGTTTCTAGGTCCTaGAAAACATGTTTTCGTGAG +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASEVSRS*KTCFRE
Trigger: CTCACGAAAACATGTTTTTCAGGACCTAGAAACCTC...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCATTCTCAGTGACTTaGTGCACCTTCAAGTGCTCA +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRASFSVT*CTFKCS
Trigger: TGAGCACTTGAAGGTGCAGCAAGTCACTGAGAATGA...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp ATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATAAAGACAATCCTGACCCAACCCTaGCTTTGCATGCCCTGCATT +
Preference number: 4 (lower is better)
Translates to: ISCTNLPTMCVGSHIIKTILTQP*LCMPCI
Trigger: AATGCAGGGCATGCAAAGGCAGGGTTGGGTCAGGAT...TGTCTTTATAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTGCTCTTGGGCTTCTTaGCTTGAGAGAGCTCATCAA +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHCSWAS*LERAHQ
Trigger: TTGATGAGCTCTCTCAAGGCAAGAAGCCCAAGAGCA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAAAGCCATCAGCCTTTTaGCATCAGTCCGTCATCATC +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSKPSAF*HQSVII
Trigger: GATGATGACGGACTGATGGCAAAAGGCTGATGGCTT...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATAGGAAGCCTCCAGGTTaGATGGAAGCAACTTTAATT +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDRKPPG*MEATLI
Trigger: AATTAAAGTTGCTTCCATCCAACCTGGAGGCTTCCT...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTTAGAGCTCTGGGCATaGGCTTGTCTTGGCCAAAAT +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHLELWA*ACLGQN
Trigger: ATTTTGGCCAAGACAAGCCCATGCCCAGAGCTCTAA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp AGTAATAAATCACAGACCTCCCTTCTTGTCAATGTCTATGGATTAAACCAGAGCCCCTCTCTTGGAATCTaGATCAGGAGCCCTTTTTGG +
Preference number: 4 (lower is better)
Translates to: SNKSQTSLLVNVYGLNQSPSLGI*IRSPFW
Trigger: CCAAAAAGGGCTCCTGATCCAGATTCCAAGAGAGGG...GCTCTGGTTTAATCCATAGACATTGACAAGAAGGGAGGTCTGTGATTTATTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTTTTCTCACTGCAAGATaGGGCTATTATGATGCCTAC +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGFLTAR*GYYDAY
Trigger: GTAGGCATCATAATAGCCCCATCTTGCAGTGAGAAA...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATCTCCTATCAGCTCTATaGCTTTGGAACTTCCTTAAC +
Preference number: 4 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDLLSAL*LWNFLN
Trigger: GTTAAGGAAGTTCCAAAGCCATAGAGCTGATAGGAG...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATAGGAGGGATGCTCACTTaGAAATGTAGGCCAGTGAAA +
Preference number: 4 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIGGMLT*KCRPVK
Trigger: TTTCACTGGCCTACATTTCCAAGTGAGCATCCCTCC...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAAGAACAAAACAAGTCTaGGCACCGTGGCTCATACCT +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSRTKQV*APWLIP
Trigger: AGGTATGAGCCACGGTGCCCAGACTTGTTTTGTTCT...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAACTCTGTTGGGAAGGATaGCCCTTTGCAAATGACGTT +
Preference number: 4 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKLCWEG*PFANDV
Trigger: AACGTCATTTGCAAAGGGCCATCCTTCCCAACAGAG...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTATACATGAGGAAGCATaGCACCGAGAAGAGGATCAA +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIIHEEA*HREEDQ
Trigger: TTGATCCTCTTCTCGGTGTCATGCTTCCTCATGTAT...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR TCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTGCTGGCTAACGAGTTaGTCAATAGGAGGAAATTCC +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHCWLTS*SIGGNS
Trigger: GGAATTTCCTCCTATTGATCAACTCGTTAGCCAGCA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR TCA 90 bp ATTGATCCAACAGTGAAGAGTGGTACTCCTCTATTTGAAGGCAGGATCCTAGGACACAGTGTGTTAAATTaGCGAAGTGTTGAAAACAGG +
Preference number: 4 (lower is better)
Translates to: IDPTVKSGTPLFEGRILGHSVLN*RSVENR
Trigger: CCTGTTTTCAACACTTCGTCAATTTAACACACTGTG...TCCTAGGATCCTGCCTTCAAATAGAGGAGTACCACTCTTCACTGTTGGATCAAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ATTTGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCTGGTACTCCTCTATTTaGAGGCAGGATCCTAGGATC +
Preference number: 4 (lower is better)
Translates to: ICNVRFPVQIYQPCVLAVWYSSI*RQDPRI
Trigger: GATCCTAGGATCCTGCCTTCAAATAGAGGAGTACCA...GACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTGGGTTCCTTCCAGGATaGACATCACAGGTTCTTGGG +
Preference number: 4 (lower is better)
Translates to: MQYDLAIFISGHQKNLECGFLPG*TSQVLG
Trigger: CCCAAGAACCTGTGATGTTCATCCTGGAAGGAACCC...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTCATCGGTTAAATGTTTaGTGGCCCAGAACTGAAGAC +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIHRLNV*WPRTED
Trigger: GTCTTCAGTTCTGGGCCATCAAACATTTAACCGATG...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATAAAGACATCTGTCCTGCAGCATTaGTGCAACCTTGCTGTAAGC +
Preference number: 4 (lower is better)
Translates to: ISCTNLPTMCVGSHIIKTSVLQH*CNLAVS
Trigger: GCTTACAGCAAGGTTGCAGCAATGCTGCAGGACAGA...TGTCTTTATAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTAGAAGTTCACGGCCATaGATTGTTTGTAGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRARSSRP*IVCSQS
Trigger: TGACTGACTACAAACAATGCATGGCCGTGAACTTCT...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTTTGAGGGCTTCCATTaGCTAGGTGGCCTTTTTCTT +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHFEGFH*LGGLFL
Trigger: AAGAAAAAGGCCACCTAGGCAATGGAAGCCCTCAAA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp ATTTGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCTGCCTTTGCATGCCCTaGATTTTTGTTCGCCCACAT +
Preference number: 4 (lower is better)
Translates to: ICNVRFPVQIYQPCVLAVCLCMP*IFVRPH
Trigger: ATGTGGGCGAACAAAAATGCAGGGCATGCAAAGGCA...GACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTGTAACAATTTCACTCTaGAGCATGTGTCATGGGAAA +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGVTISL*SMCHGK
Trigger: TTTCCCATGACACATGCTGCAGAGTGAAATTGTTAC...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTTACTGTGATGGGCACTaGGCTTATTTTCAACTGGGC +
Preference number: 4 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSYCDGH*AYFQLG
Trigger: GCCCAGTTGAAAATAAGCGCAGTGCCCATCACAGTA...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATCTTTTATCTGCACTaGCTTCGTGATGTCCATTTG +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASIFYLH*LRDVHL
Trigger: CAAATGGACATCACGAAGCCAGTGCAGATAAAAGAT...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTGGCATGGGCTTGTCTTaGCCAAAATGTCTTTTAGCA +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIGMGLS*PKCLLA
Trigger: TGCTAAAAGACATTTTGGCCAAGACAAGCCCATGCC...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATGTTTCTCTGTCTCTGTaGGAAGACAGAATCTGGACT +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHVSLSL*EDRIWT
Trigger: AGTCCAGATTCTGTCTTCCCACAGAGACAGAGAAAC...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTCAGAGTTGTGGTGATTaGAGTATACATAGAAAGGGT +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGQSCGD*SIHRKG
Trigger: ACCCTTTCTATGTATACTCCAATCACCACAACTCTG...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCACACAGAAATTTAGCTaGGCACAATGGTGCTTATCT +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASTQKFS*AQWCLS
Trigger: AGATAAGCACCATTGTGCCCAGCTAAATTTCTGTGT...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp GTTCAGCCCTTGACTCAAGTTGTGTACTATTTGTTCTaGGAAACAGAGAGAGACAAACTATCCAGTGTCATC +
Preference number: 4 (lower is better)
Translates to: VQPLTQVVYYLF*ETERDKLSSVI
Trigger: GATGACACTGGATAGTTTGTCTCTCTCTGTTTCCAAGAACAAATAGTACACAACTTGAGTCAAGGGCTGAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp AATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTACAAGGAACCCCAGTTTaGAAATGTCTGTCCCAGAAA +
Preference number: 4 (lower is better)
Translates to: NVRFPVQIYQPCVLAVTLQGTPV*KCLSQK
Trigger: TTTCTGGGACAGACATTTTCAAACTGGGGTTCCTTG...TAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAAGACAGGAAAACTCTATaGTCTAGTCATTCTTTCAGA +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQDRKTL*SSHSFR
Trigger: TCTGAAAGAATGACTAGATCATAGAGTTTTCCTGTC...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATACTGCATCTCAGGATCTaGTCTCAAATTTTCCACCAT +
Preference number: 4 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLILHLRI*SQIFHH
Trigger: ATGGTGGAAAATTTGAGATCAGATCCTGAGATGCAG...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTGGACCATTTTTGAGCTaGGTTCCCACAGACCAAATA +
Preference number: 4 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSGPFLS*VPTDQI
Trigger: TATTTGGTCTGTGGGAACGCAGCTCAAAAATGGTCC...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTTCTGGTCATCCTCACTaGTCATTATATGCTACTTAT +
Preference number: 4 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGSGHPH*SLYATY
Trigger: ATAAGTAGCATATAATGAGCAGTGAGGATGACCAGA...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTAGGAAGCCTCCAGGTTaGATGGAAGCAACTTTAATT +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIRKPPG*MEATLI
Trigger: AATTAAAGTTGCTTCCATCCAACCTGGAGGCTTCCT...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTTCCCACTTGTCACTaGTGCCTGCGATATTTGTTA +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSFPTCH*CLRYLL
Trigger: TAACAAATATCGCAGGCACCAGTGACAAGTGGGAAA...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CCA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAATCTTGTCAATGTCTATaGATTAAACCAGAGCAACAG +
Preference number: 4 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQSCQCL*IKPEQQ
Trigger: CTGTTGCTCTGGTTTAATCCATAGACATTGACAAGA...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTATAAGTAAGTATACATaGGGAAGCATGACACCGAGA +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIISKYT*GSMTPR
Trigger: TCTCGGTGTCATGCTTCCTCATGTATACTTACTTAT...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR TCA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCTTTCTCTCCAGGATCTaGGAGCCATTCCTTTGGAAC +
Preference number: 4 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSFLSRI*EPFLWN
Trigger: GTTCCAAAGGAATGGCTCTCAGATCCTGGAGAGAAA...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTGGAAATGTAGGCCAGTaGAATCCAATTATACTTATG +
Preference number: 4 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAGNVGQ*NPIILM
Trigger: CATAAGTATAATTGGATTTCACTGGCCTACATTTCC...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR GCA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCAGCTCTTCTTGTATTTaGAAAATACTGTCCCACATA +
Preference number: 4 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASSSSCI*KILSHI
Trigger: TATGTGGGACAGTATTTTGCAAATACAAGAAGAGCT...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR GCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAGCATTGCTGCAACCTTaGTGTAAGCATCTTTTATCT +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSALLQP*CKHLLS
Trigger: AGATAAAAGATGCTTACAGCAAGGTTGCAGCAATGC...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTGCATTGCTGCAACCTTaGTGTAAGCATCTTTTATCT +
Preference number: 4 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIALLQP*CKHLLS
Trigger: AGATAAAAGATGCTTACAGCAAGGTTGCAGCAATGC...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR GCA 90 bp TGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACAGCATTGCTGCAACCTTaGTGTAAGCATCTTTTATCT +
Preference number: 4 (lower is better)
Translates to: CNVRFPVQIYQPCVLAVTALLQP*CKHLLS
Trigger: AGATAAAAGATGCTTACAGCAAGGTTGCAGCAATGC...TGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR GCA 90 bp AATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTAAGAAGTTCACGGCCATaGATTGTTTGTAGTCAGTCA +
Preference number: 4 (lower is better)
Translates to: NVRFPVQIYQPCVLAVTLRSSRP*IVCSQS
Trigger: TGACTGACTACAAACAATGCATGGCCGTGAACTTCT...TAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CCA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATAATCTTTTATCTGCACTaGCTTCGTGATGTCCATTTG +
Preference number: 4 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIIFYLH*LRDVHL
Trigger: CAAATGGACATCACGAAGCCAGTGCAGATAAAAGAT...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACAACCAACCATGTGTGTTaGCAGTCACATTATAAAGAC +
Preference number: 4 (lower is better)
Translates to: CNVRFPVQIYQPCVLAVTTNHVC*QSHYKD
Trigger: GTCTTTATAATGTGACTGCCAACACACATGGTTGGT...TGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR CAA 72 bp AAGACTGTTCAGCCCTTGACTCAAGTTGTGTACTATTaGTTCTTGGAAACAGAGAGAGACAAACTATCCAGT +
Preference number: 4 (lower is better)
Translates to: KTVQPLTQVVYY*FLETERDKLSS
Trigger: ACTGGATAGTTTGTCTCTCTCTGTTTCCAAGAACAAATAGTACACAACTTGAGTCAAGGGCTGAACAGTCTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR TCA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATAACAGAATTTCCCATTaGACAGCTTTTAGCCAATCA +
Preference number: 4 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHNRISH*TAFSQS
Trigger: TGATTGGCTAAAAGCTGTTCAATGGGAAATTCTGTT...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAAACCTTCTTGGCCAATaGCAGCAAAAGACTAATAAA +
Preference number: 4 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSNLLGQ*QQKTNK
Trigger: TTTATTAGTCTTTTGCTGCCATTGGCCAAGAAGGTT...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp ATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATAAAGACACCAGTAACAAATGGATaGGTTAGAAGGCAGATAAGA +
Preference number: 4 (lower is better)
Translates to: ISCTNLPTMCVGSHIIKTPVTNG*VRRQIR
Trigger: TCTTATCTGCCTTCTAACTCATCCATTTGTTACTGG...TGTCTTTATAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
3UTR CAA 72 bp AACCAAAGTACATGTACCAGAAAGTTCATAGCTGCATaGTTCATACTTGTTCAAACTAGAAGGGACTCAAAC +
Preference number: 4 (lower is better)
Translates to: NQSTCTRKFIAA*FILVQTRRDSN
Trigger: GTTTGAGTCCCTTCTAGTTTGAACAAGTATGAACAATGCAGCTATGAACTTTCTGGTACATGTACTTTGGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTCTCAGCACCATCACCTaGAGAATAATGTCAATGAAA +
Preference number: 4 (lower is better)
Translates to: MQYDLAIFISGHQKNLECLSTIT*RIMSMK
Trigger: TTTCATTGACATTATTCTCCAGGTGATGGTGCTGAG...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR TCA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCAATAATCAAAATTGGTaGGAGTCAGTTAGGGACCAT +
Preference number: 4 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSNNQNW*ESVRDH
Trigger: ATGGTCCCTAACTGACTCTCACCAATTTTGATTATT...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CCA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCTCATATAGGGGCTTCTaGGTGTTGGTAATGTTTTAT +
Preference number: 4 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSSYRGF*VLVMFY
Trigger: ATAAAACATTACCAACACCCAGAAGCCCCTATATGA...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000566838.2
3UTR CAA 72 bp ATACTGAATCTCCAAAATCATAACCTAACTGCAGGATaGCTCTCTCGTCTAAATGGAATTTTACATCTGTGT +
Preference number: 4 (lower is better)
Translates to: ILNLQNHNLTAG*LSRLNGILHLC
Trigger: ACACAGATGTAAAATTCCATTTAGACGAGAGAGCAATCCTGCAGTTAGGTTATGATTTTGGAGATTCAGTAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GTGCTAAGATGTAGTCCTGGCCGTAGTCTTCCTGTACCTCAGCGGGGAGGTGGTTGTGGGGATGAGCCCTaGCTAGCTTCGGTGACTCCT +
Preference number: 5 (lower is better)
Translates to: VLRCSPGRSLPVPQRGGGCGDEP*LASVTP
Trigger: AGGAGTCACCGAAGCTAGCAAGGGCTCATCCCCACA...ACCACCTCCCCGCTGAGGTACAGGAAGACTACGGCCAGGACTACATCTTAGCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS GCA 90 bp CCGAGAAGAAAGTGCTCATTCTCAGTGACTTGCTGCACCTTCAAGTaGTCAGGGCCAGTGAGTCTAGCGGGCAAAGGCTGGCTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PRRKCSFSVTCCTFK*SGPVSLAGKGWLEA
Trigger: TGCCTCCAGCCAGCCTTTGCCCGCTAGACTCACTGGCCCTGAGCACTTGAAGGTGCAGCAAGTCACTGAGAATGAGCACTTTCTTCTCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566213.1
CDS GCA 90 bp CTGTGGGGACAGCCAGGCAGATCCATGCTGTGTCCGAGAAGAAAGTaGTCATTCTCAGTGACTTGCTGCACCTTCAAGTGCTCAGGGCCA +
Preference number: 5 (lower is better)
Translates to: LWGQPGRSMLCPRRK*SFSVTCCTFKCSGP
Trigger: TGGCCCTGAGCACTTGAAGGTGCAGCAAGTCACTGAGAATGAGCACTTTCTTCTCGGACACAGCATGGATCTGCCTGGCTGTCCCCACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566213.1
CDS CCA 90 bp CACCGAGAGGCGCGGAGAGCAGGTTCTTCGCAATTCCTCAGCTCCTaGGCCATTTTCATTCAAAACTCCGGCAAATACCGTGAAGCCCAG +
Preference number: 5 (lower is better)
Translates to: HREARRAGSSQFLSS*AIFIQNSGKYREAQ
Trigger: CTGGGCTTCACGGTATTTGCCGGAGTTTTGAATGAAAATGGCCCAGGAGCTGAGGAATTGCGAAGAACCTGCTCTCCGCGCCTCTCGGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000568090.5
ENST00000569351.2
CDS-3UTR CAA 90 bp AGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCAAAGCACCCCAGCATTGTaGATCACAGCCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: SEQGRSTSKRLSLACNRQSTPAL*ITAHSP
Trigger: AGGACTGTGGGCTGTGATCAACAATGCTGGGGTGCT...TTGCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATCTGGACTTCTTTAATTGCCAGCTGGCAGACACAGCTGGCCCCTCTGCATGGATCCAGCTTTTCCCACTaGTCACTGGTGCCTGCGATA +
Preference number: 5 (lower is better)
Translates to: IWTSLIASWQTQLAPLHGSSFSH*SLVPAI
Trigger: TATCGCAGGCACCAGTGACAAGTGGGAAAAGCTGGA...TCCATGCAGAGGGGCCAGCTGTGTCTGCCAGCTGGCAATTAAAGAAGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGTCCTGACCTAGCTGGATaGAGGCTGCTCAACACTGGG +
Preference number: 5 (lower is better)
Translates to: GCSTLGTIFGLTIAGSFCPDLAG*RLLNTG
Trigger: CCCAGTGTTGAGCAGCCTCAATCCAGCTAGGTCAGG...ACAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS TCA 90 bp CCTCAGCTCCTGGGCCATTTTCATTCAAAACTCCGGCAAATACCGTaGAGCCCAGCTCATCCAGATACTTGCACAAAGCATGGCCAAGCC +
Preference number: 5 (lower is better)
Translates to: PQLLGHFHSKLRQIP*SPAHPDTCTKHGQA
Trigger: GGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAGTTTTGAATGAAAATGGCCCAGGAGCTGAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000568090.5
ENST00000569351.2
CDS-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCTGGTCACAGCCGCCTTaGATGAGCCATAAGATGCCA +
Preference number: 5 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGWSQPP*MSHKMP
Trigger: TGGCATCTTATGGCTCATCAAAGGCGGCTGTGACCA...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCACCGGAGAGAAGTCCTaGCTGGCTAACGAGTTGATC +
Preference number: 5 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGTGEKS*LANELI
Trigger: GATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGT...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS TCA 90 bp GTGTGCTCTGTCAGACCAAGAGGACCTTCGGGGTTCCTTCCAGGATaGACATCACAGGTTCTTGGGCTCAGAAACCTACTTGTTAGGAAG +
Preference number: 5 (lower is better)
Translates to: VCSVRPRGPSGFLPG*TSQVLGLRNLLVRK
Trigger: CTTCCTAACAAGTAGGTTTCTGAGCCCAAGAACCTGTGATGTTCATCCTGGAAGGAACCCCGAAGGTCCTCTTGGTCTGACAGAGCACAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GGTCGATGGATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAAGCACCCCAGCATTGTaGATCACAGCCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: GRWIFPKLNKSPRNPSLKSTPAL*ITAHSP
Trigger: AGGACTGTGGGCTGTGATCAACAATGCTGGGGTGCT...TTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCCATCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp GGTCGATGGATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAACCAAGCACCCCAGCATaGTTGATCACAGCCCACAGT +
Preference number: 5 (lower is better)
Translates to: GRWIFPKLNKSPRNPSLKPSTPA*LITAHS
Trigger: ACTGTGGGCTGTGATCAACAATGCTGGGGTGCTTGG...TTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGATCCATCGACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp GCTCTTCGCCAAGATAGCATGCTGGATGTCCCGCAGCACCGGAGAGAAGTCCTTTTGCTGGCTAACGAGTaGATCAATAGGAGGAAATTC +
Preference number: 5 (lower is better)
Translates to: ALRQDSMLDVPQHRREVLLLANE*INRRKF
Trigger: GAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAA...AAGGACTTCTCTCCGGTGCTGCGGGACATCCAGCATGCTATCTTGGCGAAGAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GGATTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGGCATGCCCTGCATTTTaGTTCGCCCACATAGAATGC +
Preference number: 5 (lower is better)
Translates to: GLRLLNTGDNLRVNNSRQACPAF*FAHIEC
Trigger: GCATTCTATGTGGGCGAACAAAAATGCAGGGCATGC...CTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCCCAGAGCCCATCCCTTaGGCTTCCCTCTCACCTCTG +
Preference number: 5 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVPEPIP*ASLSPL
Trigger: CAGAGGTGAGAGGGAAGCCAAAGGGATGGGCTCTGG...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS CCA 90 bp GCAAATACCGTGAAGCCCAGCTCATCCAGATACTTGCACAAAGCATaGCCAAGCCCGCAATCACCACCCACAAACACACACCTTCTATTT +
Preference number: 5 (lower is better)
Translates to: ANTVKPSSSRYLHKA*PSPQSPPTNTHLLF
Trigger: AAATAGAAGGTGTGTGTTTGTGGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563491.5
CDS-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCTTCACCAGCCTCCCTTaGGATTTTCTAAGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGFTSLP*DFLRRG
Trigger: GCCTCTTCTTAGAAAATCCAAAGGGAGGCTGGTGAA...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTATGCCAGCCTTTCCATaGGGGCCCCTCCTCCCATGC +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIMPAFP*GPLLPC
Trigger: GCATGGGAGGAGGGGCCCCAATGGAAAGGCTGGCAT...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATATGCCAGCCTTTCCATaGGGGCCCCTCCTCCCATGC +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHMPAFP*GPLLPC
Trigger: GCATGGGAGGAGGGGCCCCAATGGAAAGGCTGGCAT...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp AGTGACCCAGTGACCCAAAAGTCAGGTCGATGGATCTTCCCTAAACTGAACAAGGACCCAACCCTGCCTTaGCATGCCCTGCATTTTTGT +
Preference number: 5 (lower is better)
Translates to: SDPVTQKSGRWIFPKLNKDPTLP*HALHFC
Trigger: ACAAAAATGCAGGGCATGCAAAGGCAGGGTTGGGTC...CTTGTTCAGTTTAGGGAAGATCCATCGACCTGACTTTTGGGTCACTGGGTCACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCATTCACCATTTCCCTCTaGTACCAGCTCTCAAGCAGC +
Preference number: 5 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPFTISL*YQLSSS
Trigger: GCTGCTTGAGAGCTGGTACAAGAGGGAAATGGTGAA...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS CCA 90 bp CTGAGCTCTTCTTGTATTTGCAAAATACTGTCCCACATAGTACTGTaGGGACAGCCAGGCAGATCCATGCTGTGTCCGAGAAGAAAGTGC +
Preference number: 5 (lower is better)
Translates to: LSSSCICKILSHIVL*GQPGRSMLCPRRKC
Trigger: GCACTTTCTTCTCGGACACAGCATGGATCTGCCTGGCTGTCCCCACAGTACTATGTGGGACAGTATTTTGCAAATACAAGAAGAGCTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566213.1
CDS CCA 90 bp CATGCATTGTTTGTAGTCAGTCATAAGAAGAAGCTCCCCATCAGTTaGAAAGCCAAGCACCCCAGCATTGTTGATCACAGCCCACAGTCC +
Preference number: 5 (lower is better)
Translates to: HALFVVSHKKKLPIS*KAKHPSIVDHSPQS
Trigger: GGACTGTGGGCTGTGATCAACAATGCTGGGGTGCTTGGCTTTCCAACTGATGGGGAGCTTCTTCTTATGACTGACTACAAACAATGCATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566213.1
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CCA 90 bp CAGGTTCTTGGGCTCAGAAACCTACTTGTTAGGAAGCCTCCAGGTTaGATGGAAGCAACTTTAATTCCCCACTTGGAAAGCTCCAGTCTC +
Preference number: 5 (lower is better)
Translates to: QVLGLRNLLVRKPPG*MEATLIPHLESSSL
Trigger: GAGACTGGAGCTTTCCAAGTGGGGAATTAAAGTTGCTTCCATCCAACCTGGAGGCTTCCTAACAAGTAGGTTTCTGAGCCCAAGAACCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTCTTCGTGATGTCCATTaGGAGCACCGAGAGGCGCGG +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASILRDVH*EHREAR
Trigger: CCGCGCCTCTCGGTGCTCCAAATGGACATCACGAAG...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp ACCATCACCTGGAGAATAATGTCAATGAAACCTGCTCCTCAGAGTTGTGGTGATCCAAGCACCCCAGCATaGTTGATCACAGCCCACAGT +
Preference number: 5 (lower is better)
Translates to: TITWRIMSMKPAPQSCGDPSTPA*LITAHS
Trigger: ACTGTGGGCTGTGATCAACAATGCTGGGGTGCTTGG...ATCACCACAACTCTGAGGAGCAGGTTTCATTGACATTATTCTCCAGGTGATGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATAGTGAGCAAGGCAGATCCACAAGTAAGCGCCTTTCCCTGGCGTGTAATAGGCGTTCACGGCCATGCATaGTTTGTAGTCAGTCATAAG +
Preference number: 5 (lower is better)
Translates to: IVSKADPQVSAFPWRVIGVHGHA*FVVSHK
Trigger: CTTATGACTGACTACAAACAATGCATGGCCGTGAAC...GCCTATTACACGCCAGGGAAAGGCGCTTACTTGTGGATCTGCCTTGCTCACTAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TTTGTATCCCAGTCTCTCAGTCCAACCAGCACATTTGGCTTCACCTCTGACCCATCTCCTGCAAAGTGCTaGGTTGTTCACATAGCTGTG +
Preference number: 5 (lower is better)
Translates to: FVSQSLSPTSTFGFTSDPSPAKC*VVHIAV
Trigger: CACAGCTATGTGAACAACCAAGCACTTTGCAGGAGA...TGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGACTGAGAGACTGGGATACAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTCTGAAGCAGGGAGAATaGCTTGAACCCAGGAGGCAG +
Preference number: 5 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGLKQGE*LEPRRQ
Trigger: CTGCCTCCTGGGTTCAAGCAATTCTCCCTGCTTCAG...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTGCAATCCCAGCACTTaGGGAGGCCCAGGTAGGTGG +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHCNPST*GGPGRW
Trigger: CCACCTACCTGGGCCTCCCAAAGTGCTGGGATTGCA...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTCCAAGCACCCCAGCATaGTTGATCACAGCCCACAGT +
Preference number: 5 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAPSTPA*LITAHS
Trigger: ACTGTGGGCTGTGATCAACAATGCTGGGGTGCTTGG...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTGGTCACAGCCGCCTTaGATGAGCCATAAGATGCCA +
Preference number: 5 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASWSQPP*MSHKMP
Trigger: TGGCATCTTATGGCTCATCAAAGGCGGCTGTGACCA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTCCAGCTTTTCCCACTaGTCACTGGTGCCTGCGATA +
Preference number: 5 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASSSFSH*SLVPAI
Trigger: TATCGCAGGCACCAGTGACAAGTGGGAAAAGCTGGA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCGCTCTGGGCATGGGCTaGTCTTGGCCAAAATGTCTT +
Preference number: 5 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASALGMG*SWPKCL
Trigger: AAGACATTTTGGCCAAGACAAGCCCATGCCCAGAGC...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp GGATTGAGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCAGGGTATATACAATTaGACTAATCCTGACCCAACC +
Preference number: 5 (lower is better)
Translates to: GLRLLNTGDNLRVNNSRQQGIYN*TNPDPT
Trigger: GGTTGGGTCAGGATTAGTCAAATTGTATATACCCTG...CTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCTCAATCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCAAGGCGCTTGTCTCTGTaGGGAAGGATGGCCCTTTGC +
Preference number: 5 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSRRLSL*GRMALC
Trigger: GCAAAGGGCCATCCTTCCCAACAGAGACAAGCGCCT...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTTCAGGGAGCAGGCGCTaGTCTCTGTTGGGAAGGATG +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASISGSRR*SLLGRM
Trigger: CATCCTTCCCAACAGAGACAAGCGCCTGCTCCCTGA...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTAGCACCCCAGCATTGTaGATCACAGCCCACAGTCCT +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASISTPAL*ITAHSP
Trigger: AGGACTGTGGGCTGTGATCAACAATGCTGGGGTGCT...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCAACAGAGGGAAGGTATaGCCTACTCAGCTTACAGGG +
Preference number: 5 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVNRGKV*PTQLTG
Trigger: CCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTT...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp AGGCTGCTCAACACTGGGGACAATCTTCGGGTTAACAATAGCAGGCAGCTTTTGAAGACTGTTCAGCCCTaGACTCAAGTTGTGTACTAT +
Preference number: 5 (lower is better)
Translates to: RLLNTGDNLRVNNSRQLLKTVQP*TQVVYY
Trigger: ATAGTACACAACTTGAGTCAAGGGCTGAACAGTCTT...CAAAAGCTGCCTGCTATTGTTAACCCGAAGATTGTCCCCAGTGTTGAGCAGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp AAACAGAGGGAAGGTATTGCCTACTCAGCTTACAGGGAACTGAACACAGTGTGTCCAAGGAACCCCAGTTaGAAAATGTCTGTCCCAGAA +
Preference number: 5 (lower is better)
Translates to: KQREGIAYSAYRELNTVCPRNPS*KMSVPE
Trigger: TTCTGGGACAGACATTTTCAAACTGGGGTTCCTTGG...ACACACTGTGTTCAGTTCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTCAGTGTGGCCTCTGCTaGCTGATGACTTATAAGCCA +
Preference number: 5 (lower is better)
Translates to: WADTSFFFKHLMEFLATLQCGLC*LMTYKP
Trigger: TGGCTTATAAGTCATCAGCAAGCAGAGGCCACACTG...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTCAGGGAGTCCCCAAGTaGGAAACCCATCTCAAGACT +
Preference number: 5 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLQGVPK*ETHLKT
Trigger: AGTCTTGAGATGGGTTTCCAACTTGGGGACTCCCTG...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTACTTTCCAAAAAGCTaGCGGTCTCCCACGCTGTCT +
Preference number: 5 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASYFPKS*RSPTLS
Trigger: AGACAGCGTGGGAGACCGCAAGCTTTTTGGAAAGTA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCACTCTGTCCTGCAGCATaGCTGCAACCTTGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSLCPAA*LQPCCK
Trigger: CTTACAGCAAGGTTGCAGCAATGCTGCAGGACAGAG...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAACTCTGTCCTGCAGCATaGCTGCAACCTTGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKLCPAA*LQPCCK
Trigger: CTTACAGCAAGGTTGCAGCAATGCTGCAGGACAGAG...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGACCGGAGAGAAGTCCTaGCTGGCTAACGAGTTGATC +
Preference number: 5 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRTGEKS*LANELI
Trigger: GATCAACTCGTTAGCCAGCAAGGACTTCTCTCCGGT...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAAGCTCTGGGCATGGGCTaGTCTTGGCCAAAATGTCTT +
Preference number: 5 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKALGMG*SWPKCL
Trigger: AAGACATTTTGGCCAAGACAAGCCCATGCCCAGAGC...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp CAGTCCATGCTGCTGCTCTGCCTAAGAAGTAGGCATTCTTTTATTCCTTTACTTGGCTCAGAAACCTACTaGTTAGGAAGCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: QSMLLLCLRSRHSFIPLLGSETY*LGSLQV
Trigger: AACCTGGAGGCTTCCTAACAAGTAGGTTTCTGAGCC...AAGTAAAGGAATAAAAGAATGCCTACTTCTTAGGCAGAGCAGCAGCATGGACTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCTGGCTGTGCTCATCTTaGACAACAATGAGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASWLCSS*TTMRGS
Trigger: TGAACCCCTCATTGTTGTCAAAGATGAGCACAGCCA...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTAATACAACTCTACCATaGAGGGAGGGAGTGTGTGTC +
Preference number: 5 (lower is better)
Translates to: WADTSFFFKHLMEFLATLNTTLP*REGVCV
Trigger: GACACACACTCCCTCCCTCAATGGTAGAGTTGTATT...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATGTCCAACCAGCACATTaGGCTTCACCTCTGACCCAT +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHVQPAH*ASPLTH
Trigger: ATGGGTCAGAGGTGAAGCCAAATGTGCTGGTTGGAC...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCACTCATTCTCAGTGACTaGCTGCACCTTCAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSLILSD*LHLQVL
Trigger: GAGCACTTGAAGGTGCAGCAAGTCACTGAGAATGAG...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASISSSRY*HKAWPS
Trigger: GCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCT...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CAA 90 bp ATCTTCCCTAAACTGAACAAGAGCCCAAGGAACCCCAGTTTGAAAATGTCTGTCGTTCACGGCCATGCATaGTTTGTAGTCAGTCATAAG +
Preference number: 5 (lower is better)
Translates to: IFPKLNKSPRNPSLKMSVVHGHA*FVVSHK
Trigger: CTTATGACTGACTACAAACAATGCATGGCCGTGAAC...GACAGACATTTTCAAACTGGGGTTCCTTGGGCTCTTGTTCAGTTTAGGGAAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATGGTGCCTGCGATATTaGTTAGGAAGCCTCCAGGTT +
Preference number: 5 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSWCLRY*LGSLQV
Trigger: AACCTGGAGGCTTCCTAACAAATATCGCAGGCACCA...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CAA 90 bp TGTAATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACAGCAGGCAGCTTTTGTTaGATGGCACAAACAGAGGGA +
Preference number: 5 (lower is better)
Translates to: CNVRFPVQIYQPCVLAVTAGSFC*MAQTEG
Trigger: TCCCTCTGTTTGTGCCATCAAACAAAAGCTGCCTGC...TGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATTACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTACCTATTGGGAGGTaGGAGAGGGCTGTGATGGTA +
Preference number: 5 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSLPIGR*ERAVMV
Trigger: TACCATCACAGCCCTCTCCAACCTCCCAATAGGTAA...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTTCCAAAAACCCTCTCTaGGAATCTGGATCAGGAGCC +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASISKNPL*ESGSGA
Trigger: GGCTCCTGATCCAGATTCCAAGAGAGGGTTTTTGGA...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGCATCATCTCCCACTTTaGACAGACTCTCCCTACCCA +
Preference number: 5 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRHHLPL*TDSPYP
Trigger: TGGGTAGGGAGAGTCTGTCAAAAGTGGGAGATGATG...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TGTGTTGGCAGTCACATTATAAAGACATATAAGAACCCTAAATCCCCAGTAACACTCTGTCCTGCAGCATaGCTGCAACCTTGCTGTAAG +
Preference number: 5 (lower is better)
Translates to: CVGSHIIKTYKNPKSPVTLCPAA*LQPCCK
Trigger: CTTACAGCAAGGTTGCAGCAATGCTGCAGGACAGAG...TGTTACTGGGGATTTAGGGTTCTTATATGTCTTTATAATGTGACTGCCAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTGTTCACGGCCATGCATaGTTTGTAGTCAGTCATAAG +
Preference number: 5 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRAVHGHA*FVVSHK
Trigger: CTTATGACTGACTACAAACAATGCATGGCCGTGAAC...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGTTCACCAGCCTCCCTTaGGATTTTCTAAGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRFTSLP*DFLRRG
Trigger: GCCTCTTCTTAGAAAATCCAAAGGGAGGCTGGTGAA...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp TCTCTTTGGGCTGTGTCACCAAACACTCAATCCTCCTGCCAGATTCAAAATCAAACTTTAATTCCCCACTaGGAAAGCTCCAGTCTCATA +
Preference number: 5 (lower is better)
Translates to: SLWAVSPNTQSSCQIQNQTLIPH*ESSSLI
Trigger: TATGAGACTGGAGCTTTCCAAGTGGGGAATTAAAGT...TTGATTTTGAATCTGGCAGGAGGATTGAGTGTTTGGTGACACAGCCCAAAGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATTGATCCAACAGTGAAGAGTGGTACTCCTCTATTTGAAGGCAGGATCCTAGGAAATAGCAGGCAGCTTTaGTTTGATGGCACAAACAGA +
Preference number: 5 (lower is better)
Translates to: IDPTVKSGTPLFEGRILGNSRQL*FDGTNR
Trigger: TCTGTTTGTGCCATCAAACAAAAGCTGCCTGCTATT...TCCTAGGATCCTGCCTTCAAATAGAGGAGTACCACTCTTCACTGTTGGATCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATGAACATCACAGGTTCTaGGGCTCAGAAACCTACTTG +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHEHHRF*GSETYL
Trigger: CAAGTAGGTTTCTGAGCCCAAGAACCTGTGATGTTC...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTGACACTGATGGACCCTaGTACTTTTTCACTAATCTG +
Preference number: 5 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGDTDGP*YFFTNL
Trigger: CAGATTAGTGAAAAAGTACAAGGGTCCATCAGTGTC...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTCTGAGAGCCATTCCTTaGGAACTGAATCATCAAGGA +
Preference number: 5 (lower is better)
Translates to: FPVSLSFQDYDIPTSLRALRAIP*ELNHQG
Trigger: TCCTTGATGATTCAGTTCCAAAGGAATGGCTCTCAG...AGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTCTGCCTGTCATCGTGTaGACCCATATCCCTTTCTCT +
Preference number: 5 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSLPVIV*THIPFS
Trigger: AGAGAAAGGGATATGGGTCAACACGATGACAGGCAG...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATGTGTTGGAATTCTCTTaGGGCTGTGTCACCAAACAC +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHVLEFS*GCVTKH
Trigger: GTGTTTGGTGACACAGCCCAAAGAGAATTCCAACAC...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp CCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCAAGAGTAACTCCATCTaGAATAGGGGCTGGGTAAAA +
Preference number: 5 (lower is better)
Translates to: PVSLSFQDYDIPTSLRASKSNSI*NRGWVK
Trigger: TTTTACCCAGCCCCTATTCAAGATGGAGTTACTCTT...GGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCCCCTCCCATGCCACTTaGGTGCTGCACACAATGAAG +
Preference number: 5 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSPSHAT*VLHTMK
Trigger: CTTCATTGTGTGCAGCACCAAAGTGGCATGGGAGGG...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATAAAGCCATCAGCCTTTaGCCATCAGTCCGTCATCAT +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHKAISL*PSVRHH
Trigger: ATGATGACGGACTGATGGCAAAAGGCTGATGGCTTT...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TGTGTTGGCAGTCACATTATAAAGACATATAAGAACCCTAAATCCCCAGTAACAAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGC +
Preference number: 5 (lower is better)
Translates to: CVGSHIIKTYKNPKSPVTSSSRY*HKAWPS
Trigger: GCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCT...TGTTACTGGGGATTTAGGGTTCTTATATGTCTTTATAATGTGACTGCCAACACA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp AATGTGAGATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATTCACCAGCCTCCCTTaGGATTTTCTAAGAAGAGGC +
Preference number: 5 (lower is better)
Translates to: NVRFPVQIYQPCVLAVTLFTSLP*DFLRRG
Trigger: GCCTCTTCTTAGAAAATCCAAAGGGAGGCTGGTGAA...TAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAATCTCACATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp AAACAGAGGGAAGGTATTGCCTACTCAGCTTACAGGGAACTGAACACAGTGTGTGTGTACTATTTGTTCTaGGAAACAGAGAGAGACAAA +
Preference number: 5 (lower is better)
Translates to: KQREGIAYSAYRELNTVCVYYLF*ETERDK
Trigger: TTTGTCTCTCTCTGTTTCCAAGAACAAATAGTACAC...ACACACTGTGTTCAGTTCCCTGTAAGCTGAGTAGGCAATACCTTCCCTCTGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp AGTTTCCCAGTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGAACCTAACTGCAGGATaGCTCTCTCGTCTAAATGGA +
Preference number: 5 (lower is better)
Translates to: SFPVSLSFQDYDIPTSLRNLTAG*LSRLNG
Trigger: TCCATTTAGACGAGAGAGCAATCCTGCAGTTAGGTT...CCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAACTGGGAAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCAGAGGTGATTACCTATaGGGAGGTTGGAGAGGGCTG +
Preference number: 5 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSRGDYL*GGWRGL
Trigger: CAGCCCTCTCCAACCTCCCAATAGGTAATCACCTCT...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TGGGCTGACACCTCATTCTTCTTTAAACACCTCATGGAATTTCTGGCCACTCTTCTGCATTGTTCATACTaGTTCAAACTAGAAGGGACT +
Preference number: 5 (lower is better)
Translates to: WADTSFFFKHLMEFLATLLHCSY*FKLEGT
Trigger: AGTCCCTTCTAGTTTGAACAAGTATGAACAATGCAG...AAGAGTGGCCAGAAATTCCATGAGGTGTTTAAAGAAGAATGAGGTGTCAGCCCA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATTTCACTCTGCAGCATGTGTCATGGGAAAATTCAAGCACACAAAAACCAAAGTAATTTCTGGCCACTCTaGTGGGTAACCTATCCAGAG +
Preference number: 5 (lower is better)
Translates to: ISLCSMCHGKIQAHKNQSNFWPL*WVTYPE
Trigger: CTCTGGATAGGTTACCCACAAGAGTGGCCAGAAATT...ACTTTGGTTTTTGTGTGCTTGAATTTTCCCATGACACATGCTGCAGAGTGAAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATACTTTAATTCCCCACTaGGAAAGCTCCAGTCTCATA +
Preference number: 5 (lower is better)
Translates to: TEWETTLMRNPVSQFPFHTLIPH*ESSSLI
Trigger: TATGAGACTGGAGCTTTCCAAGTGGGGAATTAAAGT...ATGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp TACAGAGTGGGAAACAACTTTAATGAGAAACCCAGTTTCCCAGTTTCCCTTTCATTGCTGGCTAACGAGTaGATCAATAGGAGGAAATTC +
Preference number: 5 (lower is better)
Translates to: YRVGNNFNEKPSFPVSLSLLANE*INRRKF
Trigger: GAATTTCCTCCTATTGATCAACTCGTTAGCCAGCAA...TGAAAGGGAAACTGGGAAACTGGGTTTCTCATTAAAGTTGTTTCCCACTCTGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566838.2
CDS-3UTR CAA 90 bp AAGTTGGAAACCCATCTCAAGACTTCATCTTCTCTGCATTTCTATCGCCCTGGTCTAATGGATTATACATaGTTAAACAGGTTTGGGTGG +
Preference number: 5 (lower is better)
Translates to: KLETHLKTSSSLHFYRPGLMDYT*LNRFGW
Trigger: CCACCCAAACCTGTTTAACAATGTATAATCCATTAG...ACCAGGGCGATAGAAATGCAGAGAAGATGAAGTCTTGAGATGGGTTTCCAACTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp TTTAAAATGTTTAAAACACCTTCGCACAAATCAGAATGGAGCTTAGCTCTTTCCAGGAAGGGGAATCGCTaGAGCCTAGGAGTTCAAGAT +
Preference number: 5 (lower is better)
Translates to: FKMFKTPSHKSEWSLALSRKGNR*SLGVQD
Trigger: ATCTTGAACTCCTAGGCTCAAGCGATTCCCCTTCCT...GGAAAGAGCTAAGCTCCATTCTGATTTGTGCGAAGGTGTTTTAAACATTTTAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp CCATGCCACTTTGGTGCTGCACACAATGAAGTTATTGATATGACCTGTATCAAAGGGAAGGATGGCCCTTaGCAAATGACGTTTATTTAT +
Preference number: 5 (lower is better)
Translates to: PCHFGAAHNEVIDMTCIKGKDGP*QMTFIY
Trigger: ATAAATAAACGTCATTTGCAAAGGGCCATCCTTCCC...TTTGATACAGGTCATATCAATAACTTCATTGTGTGCAGCACCAAAGTGGCATGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS TCA 90 bp AGAGAAAGGTTTTATTGTGATAAGACCAACAGGGTATATACAATTTaGCTAATCCTGACCCAACCCTGCCTTTGCATGCCCTGCATTTTT +
Preference number: 5 (lower is better)
Translates to: RERFYCDKTNRVYTI*LILTQPCLCMPCIF
Trigger: AAAAATGCAGGGCATGCAAAGGCAGGGTTGGGTCAGGATTAGTCAAATTGTATATACCCTGTTGGTCTTATCACAATAAAACCTTTCTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp GTTTCCCTTTCATTTCAAGACTATGACATTCCGACTTCTTTGAGGGCTTCCATTGAGCTCTTCTTGTATTaGCAAAATACTGTCCCACAT +
Preference number: 5 (lower is better)
Translates to: VSLSFQDYDIPTSLRASIELFLY*QNTVPH
Trigger: ATGTGGGACAGTATTTTGCAAATACAAGAAGAGCTC...AATGGAAGCCCTCAAAGAAGTCGGAATGTCATAGTCTTGAAATGAAAGGGAAAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000199936.9
CDS-3UTR CAA 90 bp AGAGGTTGGCAGGATTGGTATCACAAGATACAAGTCATAGTAACTCTGCTGATACAGCATAGTATTCCGTaGCATAAAAATGCCATGAAT +
Preference number: 5 (lower is better)
Translates to: RGWQDWYHKIQVIVTLLIQHSIP*HKNAMN
Trigger: ATTCATGGCATTTTTATGCAACGGAATACTATGCTG...TATCAGCAGAGTTACTATGACTTGTATCTTGTGATACCAATCCTGCCAACCTCT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATAAAGACAAGTGTTGAAAACAGGTaGCCTGAAATGCTGACATTA +
Preference number: 5 (lower is better)
Translates to: ISCTNLPTMCVGSHIIKTSVENR*PEMLTL
Trigger: TAATGTCAGCATTTCAGGCAACCTGTTTTCAACACT...TGTCTTTATAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS-3UTR CAA 90 bp ATGCAGTATGATTTAGCTATCTTTATTTCAGGGCACCAGAAAAATCTGGAATGTGGATTAGATAAGAGGTaGGCAGGATTGGTATCACAA +
Preference number: 5 (lower is better)
Translates to: MQYDLAIFISGHQKNLECGLDKR*AGLVSQ
Trigger: TTGTGATACCAATCCTGCCAACCTCTTATCTAATCC...ACATTCCAGATTTTTCTGGTGCCCTGAAATAAAGATAGCTAAATCATACTGCAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS-3UTR CAA 90 bp ATTTCCTGTACAAATCTACCAACCATGTGTGTTGGCAGTCACATTATAAAGACACAAGTTGTGTACTATTaGTTCTTGGAAACAGAGAGA +
Preference number: 5 (lower is better)
Translates to: ISCTNLPTMCVGSHIIKTQVVYY*FLETER
Trigger: TCTCTCTGTTTCCAAGAACAAATAGTACACAACTTG...TGTCTTTATAATGTGACTGCCAACACACATGGTTGGTAGATTTGTACAGGAAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS CAA 72 bp CCGGCAAATACCGTGAAGCCCAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGCCCGCAATCACCACCC +
Preference number: 6 (lower is better)
Translates to: PANTVKPSSSRY*HKAWPSPQSPP
Trigger: GGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000563491.5
CDS GCA 72 bp AAGTGCTCATTCTCAGTGACTTGCTGCACCTTCAAGTaGTCAGGGCCAGTGAGTCTAGCGGGCAAAGGCTGG +
Preference number: 6 (lower is better)
Translates to: KCSFSVTCCTFK*SGPVSLAGKGW
Trigger: CCAGCCTTTGCCCGCTAGACTCACTGGCCCTGAGCACTTGAAGGTGCAGCAAGTCACTGAGAATGAGCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566213.1
CDS CCA 72 bp GTGAAGCCCAGCTCATCCAGATACTTGCACAAAGCATaGCCAAGCCCGCAATCACCACCTGTCACCAGGACT +
Preference number: 6 (lower is better)
Translates to: VKPSSSRYLHKA*PSPQSPPVTRT
Trigger: AGTCCTGGTGACAGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000569351.2
CDS CCA 72 bp GCATCTTTTATCTGCACTGGCTTCGTGATGTCCATTTaGAGCACCGAGAGGCGCGGAGAGCAGGTTCTTCGC +
Preference number: 6 (lower is better)
Translates to: ASFICTGFVMSI*STERRGEQVLR
Trigger: GCGAAGAACCTGCTCTCCGCGCCTCTCGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGATAAAAGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000568090.5
ENST00000569351.2
CDS CAA 72 bp CCGGCAAATACCGTGAAGCCCAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGCCCGCAATCACCACCT +
Preference number: 6 (lower is better)
Translates to: PANTVKPSSSRY*HKAWPSPQSPP
Trigger: AGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000199936.9
ENST00000568090.5
ENST00000569351.2
CDS CAA 90 bp CCTGCCAGGCAGACCATCCAGCTCCACAGCTGCCCTGAGCTCTTCTaGTATTTGCAAAATACTGTCCCACATAGTACTGTGGGGACAGCC +
Preference number: 6 (lower is better)
Translates to: PARQTIQLHSCPELF*YLQNTVPHSTVGTA
Trigger: GGCTGTCCCCACAGTACTATGTGGGACAGTATTTTGCAAATACAAGAAGAGCTCAGGGCAGCTGTGGAGCTGGATGGTCTGCCTGGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566213.1
CDS TCA 72 bp CCTTGCTGTAAGCATCTTTTATCTGCACTGGCTTCGTaGTGTCCATTTGGAGCACCGAGAGGCGCGGAGAGC +
Preference number: 6 (lower is better)
Translates to: PCCKHLLSALAS*CPFGAPRGAES
Trigger: GCTCTCCGCGCCTCTCGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGATAAAAGATGCTTACAGCAAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CAA 72 bp AGCATCTTTTATCTGCACTGGCTTCGTGATGTCCATTaGGAGCACCGAGAGGCGCGGAGAGCAGGTTCTTCG +
Preference number: 6 (lower is better)
Translates to: SIFYLHWLRDVH*EHREARRAGSS
Trigger: CGAAGAACCTGCTCTCCGCGCCTCTCGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGATAAAAGATGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CAA 72 bp TCCCCATCAGTTGGAAAGCCAAGCACCCCAGCATTGTaGATCACAGCCCACAGTCCTCTGTCCTGCAGCATT +
Preference number: 6 (lower is better)
Translates to: SPSVGKPSTPAL*ITAHSPLSCSI
Trigger: AATGCTGCAGGACAGAGGACTGTGGGCTGTGATCAACAATGCTGGGGTGCTTGGCTTTCCAACTGATGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CAA 90 bp TTCAAAACTCCGGCAAATACCGTGAAGCCCAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGCCCGCAATCACCACCTGTCACCAGG +
Preference number: 6 (lower is better)
Translates to: FKTPANTVKPSSSRY*HKAWPSPQSPPVTR
Trigger: CCTGGTGACAGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAGTTTTGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000569351.2
CDS GCA 72 bp TGTCCGAGAAGAAAGTGCTCATTCTCAGTGACTTGCTaGACCTTCAAGTGCTCAGGGCCAGTGAGTCTAGCG +
Preference number: 6 (lower is better)
Translates to: CPRRKCSFSVTC*TFKCSGPVSLA
Trigger: CGCTAGACTCACTGGCCCTGAGCACTTGAAGGTGCAGCAAGTCACTGAGAATGAGCACTTTCTTCTCGGACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000566213.1
CDS CAA 90 bp CTTGCTGTAAGCATCTTTTATCTGCACTGGCTTCGTGATGTCCATTaGGAGCACCGAGAGGCGCGGAGAGCAGGTTCTTCGCAATTCCTC +
Preference number: 6 (lower is better)
Translates to: LAVSIFYLHWLRDVH*EHREARRAGSSQFL
Trigger: GAGGAATTGCGAAGAACCTGCTCTCCGCGCCTCTCGGTGCTCCAAATGGACATCACGAAGCCAGTGCAGATAAAAGATGCTTACAGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000568090.5
ENST00000569351.2
CDS CAA 90 bp CAAGAGGACCTTCGGGGTTCCTTCCAGGATGAACATCACAGGTTCTaGGGCTCAGAAACCTACTTGTTAGGAAGCCTCCAGGTTGGATGG +
Preference number: 6 (lower is better)
Translates to: QEDLRGSFQDEHHRF*GSETYLLGSLQVGW
Trigger: CCATCCAACCTGGAGGCTTCCTAACAAGTAGGTTTCTGAGCCCAAGAACCTGTGATGTTCATCCTGGAAGGAACCCCGAAGGTCCTCTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS CAA 90 bp TTCAAAACTCCGGCAAATACCGTGAAGCCCAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGCCCGCAATCACCACCCACAAACACA +
Preference number: 6 (lower is better)
Translates to: FKTPANTVKPSSSRY*HKAWPSPQSPPTNT
Trigger: TGTGTTTGTGGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAGTTTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000563491.5
CDS TCA 72 bp ATGCCCTGCATTTTTGTTCGCCCACATAGAATGCCATaGGCCATGTCTTGTGATGGGCACCCCATGACCATG +
Preference number: 6 (lower is better)
Translates to: MPCIFVRPHRMP*AMSCDGHPMTM
Trigger: CATGGTCATGGGGTGCCCATCACAAGACATGGCTCATGGCATTCTATGTGGGCGAACAAAAATGCAGGGCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS TCA 72 bp GTCAGACCAAGAGGACCTTCGGGGTTCCTTCCAGGATaGACATCACAGGTTCTTGGGCTCAGAAACCTACTT +
Preference number: 6 (lower is better)
Translates to: VRPRGPSGFLPG*TSQVLGLRNLL
Trigger: AAGTAGGTTTCTGAGCCCAAGAACCTGTGATGTTCATCCTGGAAGGAACCCCGAAGGTCCTCTTGGTCTGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS CAA 72 bp CTTCGGGGTTCCTTCCAGGATGAACATCACAGGTTCTaGGGCTCAGAAACCTACTTGTTAGGAAGCCTCCAG +
Preference number: 6 (lower is better)
Translates to: LRGSFQDEHHRF*GSETYLLGSLQ
Trigger: CTGGAGGCTTCCTAACAAGTAGGTTTCTGAGCCCAAGAACCTGTGATGTTCATCCTGGAAGGAACCCCGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS CCA 72 bp CCAGAATGTCCTTCTCCAGCTTTTCCCACTTGTCACTaGTGCCTGCGATATTTGTTAGGAAGCCTCCAGGTT +
Preference number: 6 (lower is better)
Translates to: PECPSPAFPTCH*CLRYLLGSLQV
Trigger: AACCTGGAGGCTTCCTAACAAATATCGCAGGCACCAGTGACAAGTGGGAAAAGCTGGAGAAGGACATTCTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000568090.5
CDS CAA 90 bp TTCAAAACTCCGGCAAATACCGTGAAGCCCAGCTCATCCAGATACTaGCACAAAGCATGGCCAAGCCCGCAATCACCACCTGATTTTTGT +
Preference number: 6 (lower is better)
Translates to: FKTPANTVKPSSSRY*HKAWPSPQSPPDFC
Trigger: ACAAAAATCAGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAGTTTTGAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000568090.5
CDS CCA 72 bp CTGGTGCCTGCGATATTTGTTAGGAAGCCTCCAGGTTaGATGGAAGCAACTTTAATTCCCCACTTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: LVPAIFVRKPPG*MEATLIPHLES
Trigger: GCTTTCCAAGTGGGGAATTAAAGTTGCTTCCATCCAACCTGGAGGCTTCCTAACAAATATCGCAGGCACCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000199936.9
ENST00000568090.5
CDS CCA 72 bp GGGCTCAGAAACCTACTTGTTAGGAAGCCTCCAGGTTaGATGGAAGCAACTTTAATTCCCCACTTGGAAAGC +
Preference number: 6 (lower is better)
Translates to: GLRNLLVRKPPG*MEATLIPHLES
Trigger: GCTTTCCAAGTGGGGAATTAAAGTTGCTTCCATCCAACCTGGAGGCTTCCTAACAAGTAGGTTTCTGAGCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS CCA 72 bp GTGAAGCCCAGCTCATCCAGATACTTGCACAAAGCATaGCCAAGCCCGCAATCACCACCTGATTTTTGTTTT +
Preference number: 6 (lower is better)
Translates to: VKPSSSRYLHKA*PSPQSPPDFCF
Trigger: AAAACAAAAATCAGGTGGTGATTGCGGGCTTGGCCATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000568090.5
CDS CAA 90 bp GTTAGGAAGCCTCCAGGTTGGATGGAAGCAACTTTAATTCCCCACTaGGAAAGCTCCAGTCTCATAACTGATGAGAACATGGTCACAGCC +
Preference number: 6 (lower is better)
Translates to: VRKPPGWMEATLIPH*ESSSLITDENMVTA
Trigger: GGCTGTGACCATGTTCTCATCAGTTATGAGACTGGAGCTTTCCAAGTGGGGAATTAAAGTTGCTTCCATCCAACCTGGAGGCTTCCTAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000199936.9
ENST00000566838.2
ENST00000568090.5
CDS TCA 72 bp CTGGGCCATTTTCATTCAAAACTCCGGCAAATACCGTaGAGCCCAGCTCATCCAGATACTTGCACAAAGCAT +
Preference number: 6 (lower is better)
Translates to: LGHFHSKLRQIP*SPAHPDTCTKH
Trigger: ATGCTTTGTGCAAGTATCTGGATGAGCTGGGCTTCACGGTATTTGCCGGAGTTTTGAATGAAAATGGCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000568090.5
ENST00000569351.2
CDS CCA 72 bp TTTGTAGTCAGTCATAAGAAGAAGCTCCCCATCAGTTaGAAAGCCAAGCACCCCAGCATTGTTGATCACAGC +
Preference number: 6 (lower is better)
Translates to: FVVSHKKKLPIS*KAKHPSIVDHS
Trigger: GCTGTGATCAACAATGCTGGGGTGCTTGGCTTTCCAACTGATGGGGAGCTTCTTCTTATGACTGACTACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566213.1
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CAA 72 bp GACCTCCACAGTTCCAAAGAAGTTCACGGCCATGCATaGTTTGTAGTCAGTCATAAGAAGAAGCTCCCCATC +
Preference number: 6 (lower is better)
Translates to: DLHSSKEVHGHA*FVVSHKKKLPI
Trigger: GATGGGGAGCTTCTTCTTATGACTGACTACAAACAATGCATGGCCGTGAACTTCTTTGGAACTGTGGAGGTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566213.1
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CAA 72 bp GATGAACATCACAGGTTCTTGGGCTCAGAAACCTACTaGTTAGGAAGCCTCCAGGTTGGATGGAAGCAACTT +
Preference number: 6 (lower is better)
Translates to: DEHHRFLGSETY*LGSLQVGWKQL
Trigger: AAGTTGCTTCCATCCAACCTGGAGGCTTCCTAACAAGTAGGTTTCTGAGCCCAAGAACCTGTGATGTTCATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS CAA 90 bp CGTCTTTGTGACCTCCACAGTTCCAAAGAAGTTCACGGCCATGCATaGTTTGTAGTCAGTCATAAGAAGAAGCTCCCCATCAGTTGGAAA +
Preference number: 6 (lower is better)
Translates to: RLCDLHSSKEVHGHA*FVVSHKKKLPISWK
Trigger: TTTCCAACTGATGGGGAGCTTCTTCTTATGACTGACTACAAACAATGCATGGCCGTGAACTTCTTTGGAACTGTGGAGGTCACAAAGACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000199936.9
ENST00000563491.5
ENST00000566213.1
ENST00000566838.2
ENST00000568090.5
ENST00000569351.2
CDS CAA 72 bp CCTCCAGGTTGGATGGAAGCAACTTTAATTCCCCACTaGGAAAGCTCCAGTCTCATAACTGATGAGAACATG +
Preference number: 6 (lower is better)
Translates to: PPGWMEATLIPH*ESSSLITDENM
Trigger: CATGTTCTCATCAGTTATGAGACTGGAGCTTTCCAAGTGGGGAATTAAAGTTGCTTCCATCCAACCTGGAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000199936.9
ENST00000566838.2
ENST00000568090.5
CDS CAA 72 bp TTCACCCCTTTAACTGATCTCTGGCTGTGCTCATCTTaGACAACAATGAGGGGTTCAATGTGTGCTCTGTCA +
Preference number: 6 (lower is better)
Translates to: FTPLTDLWLCSS*TTMRGSMCALS
Trigger: TGACAGAGCACACATTGAACCCCTCATTGTTGTCAAAGATGAGCACAGCCAGAGATCAGTTAAAGGGGTGAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2
CDS TCA 72 bp TTTTATTGTGATAAGACCAACAGGGTATATACAATTTaGCTAATCCTGACCCAACCCTGCCTTTGCATGCCC +
Preference number: 6 (lower is better)
Translates to: FYCDKTNRVYTI*LILTQPCLCMP
Trigger: GGGCATGCAAAGGCAGGGTTGGGTCAGGATTAGTCAAATTGTATATACCCTGTTGGTCTTATCACAATAAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000569351.2
CDS TCA 72 bp CAGTTACTGAATCAAACCTGTTTTCACCCCTTTAACTaGTCTCTGGCTGTGCTCATCTTTGACAACAATGAG +
Preference number: 6 (lower is better)
Translates to: QLLNQTCFHPFN*SLAVLIFDNNE
Trigger: CTCATTGTTGTCAAAGATGAGCACAGCCAGAGATCAGTTAAAGGGGTGAAAACAGGTTTGATTCAGTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000566838.2