Pregenerated sensors for HSD17B12 (Homo sapiens)
Ensembl gene IDs: ENSG00000149084Ensembl transcript IDs: ENST00000278353.10, ENST00000395700.4, ENST00000525736.1, ENST00000527433.6, ENST00000531185.5, ENST00000532178.1, ENST00000533090.6, ENST00000534053.1, ENST00000636722.1
Found 61 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CTGTGTAGGGCCAAGACCTTGTCTTTGAGATTGGATCTGCGGACTTaGATTCCAGTCTTTCTTGCATGCATCACACCCATATTCTATCAT | + |
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Preference number: 1 (lower is better) Translates to: LCRAKTLSLRLDLRT*IPVFLACITPIFYH Trigger: ATGATAGAATATGGGTGTGATGCATGCAAGAAAGACTGGAATTCAAGTCCGCAGATCCAATCTCAAAGACAAGGTCTTGGCCCTACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR CCA 90 bp | AAGCATTATACACAGAAGCTTCCTGGCCACAAATGGTCAGCAAACTaGGGACATCAGTTAGTATGTTTTACCAAACAAATGAACAGCATT | + |
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Preference number: 1 (lower is better) Translates to: KHYTQKLPGHKWSAN*GHQLVCFTKQMNSI Trigger: AATGCTGTTCATTTGTTTGGTAAAACATACTAACTGATGTCCCCAGTTTGCTGACCATTTGTGGCCAGGAAGCTTCTGTGTATAATGCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR-3UTR CCA 90 bp | CCATGTATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGACCTTGTCTTCCTGGCCACAAATaGTCAGCAAACTGGGGACAT | + |
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Preference number: 2 (lower is better) Translates to: PCINVIHSPILCVGPRPCLPGHK*SANWGH Trigger: ATGTCCCCAGTTTGCTGACCATTTGTGGCCAGGAAG...ACAAGGTCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATACATGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR-3UTR TCA 90 bp | CTTAAACCATGTATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGATTGGATCTGCGGACTTaGATTCCAGTCTTTCTTGCA | + |
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Preference number: 2 (lower is better) Translates to: LKPCINVIHSPILCVGPRLDLRT*IPVFLA Trigger: TGCAAGAAAGACTGGAATTCAAGTCCGCAGATCCAA...TCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATACATGGTTTAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR-3UTR TCA 90 bp | TATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGACCTTGTCTTTGAAACTTCAACACATATaGAACAATCAGGAGAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: YKCNSFTNPLCRAKTLSLKLQHI*NNQESR Trigger: TCTGCTCTCCTGATTGTTTCATATGTGTTGAAGTTT...CAAAGACAAGGTCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR-3UTR CCA 90 bp | TGCGGACTTGAATTCCAGTCTTTCTTGCATGCATCACACCCATATTCTATCATTACAAATGAACAGCATTaGTTTATCCATCTGGTTGAT | + |
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Preference number: 2 (lower is better) Translates to: CGLEFQSFLHASHPYSIITNEQH*FIHLVD Trigger: ATCAACCAGATGGATAAACCAATGCTGTTCATTTGT...AATGATAGAATATGGGTGTGATGCATGCAAGAAAGACTGGAATTCAAGTCCGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTTACGACATTCCCACGTaGTTCACTAAGATGCCGATT | + |
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Preference number: 3 (lower is better) Translates to: VQNSPFGSFHHARQYQLCYDIPT*FTKMPI Trigger: AATCGGCATCTTAGTGAACAACGTGGGAATGTCGTA...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| 3UTR TCA 72 bp | GCCAAGACCTTGTCTTTGAGATTGGATCTGCGGACTTaGATTCCAGTCTTTCTTGCATGCATCACACCCATA | + |
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Preference number: 3 (lower is better) Translates to: AKTLSLRLDLRT*IPVFLACITPI Trigger: TATGGGTGTGATGCATGCAAGAAAGACTGGAATTCAAGTCCGCAGATCCAATCTCAAAGACAAGGTCTTGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR-3UTR CAA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTATTTTCTTGATCACATaGTCCAAGTCAGGAACATCC | + |
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Preference number: 3 (lower is better) Translates to: VQNSPFGSFHHARQYQLCIFLIT*SKSGTS Trigger: GGATGTTCCTGACTTGGACAATGTGATCAAGAAAAT...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| 3UTR CCA 72 bp | TATAAGCATTATACACAGAAGCTTCCTGGCCACAAATaGTCAGCAAACTGGGGACATCAGTTAGTATGTTTT | + |
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Preference number: 3 (lower is better) Translates to: YKHYTQKLPGHK*SANWGHQLVCF Trigger: AAAACATACTAACTGATGTCCCCAGTTTGCTGACCATTTGTGGCCAGGAAGCTTCTGTGTATAATGCTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR TCA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTAAAAGAGCGAGTGAATaGATCCAGGAGGAGGCGCCG | + |
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Preference number: 4 (lower is better) Translates to: VQNSPFGSFHHARQYQLCKRASE*IQEEAP Trigger: CGGCGCCTCCTCCTGGATTCATTCACTCGCTCTTTT...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS-3UTR GCA 90 bp | CCATGTATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGACCTTGTCTAGGTAGGCCACGGTaGCCGCGCCGACCCAGTACA | + |
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Preference number: 4 (lower is better) Translates to: PCINVIHSPILCVGPRPCLGRPR*PRRPST Trigger: TGTACTGGGTCGGCGCGGGCACCGTGGCCTACCTAG...ACAAGGTCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATACATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR GCA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTGACACTAATAGGCGCTaGTCCGACACCACTTTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VQNSPFGSFHHARQYQLCDTNRR*SDTTLG Trigger: GCCCAAAGTGGTGTCGGAGCAGCGCCTATTAGTGTC...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS-3UTR TCA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTAATGAAAAGAGCGAGTaGATGAATCCAGGAGGAGGC | + |
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Preference number: 4 (lower is better) Translates to: VQNSPFGSFHHARQYQLCNEKSE*MNPGGG Trigger: GCCTCCTCCTGGATTCATTCACTCGCTCTTTTCATT...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS-3UTR TCA 90 bp | TGCGGACTTGAATTCCAGTCTTTCTTGCATGCATCACACCCATATTCTATCATTAGACCCGGAGGGCCGTaGAGAGCGAGTACGAAATAC | + |
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Preference number: 4 (lower is better) Translates to: CGLEFQSFLHASHPYSIIRPGGP*RASTKY Trigger: GTATTTCGTACTCGCTCTTCACGGCCCTCCGGGTCT...AATGATAGAATATGGGTGTGATGCATGCAAGAAAGACTGGAATTCAAGTCCGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR GCA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTTGGATCTTTCCACCATaGCAGGCAGTACCAATTGTG | + |
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Preference number: 4 (lower is better) Translates to: VQNSPFGSFHHARQYQLCWIFPP*QAVPIV Trigger: CACAATTGGTACTGCCTGGCATGGTGGAAAGATCCA...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS-3UTR TCA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTCCTGTGACAACTTCGTaGATGAAAAGAGCGAGTGAA | + |
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Preference number: 4 (lower is better) Translates to: VQNSPFGSFHHARQYQLCPVTTS*MKRASE Trigger: TTCACTCGCTCTTTTCATTCACGAAGTTGTCACAGG...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS-3UTR CCA 90 bp | TATAAGCATTATACACAGAAGCTTCCTGGCCACAAATGGTCAGCAAACTGGGGACTTCCTGGCCACAAATaGTCAGCAAACTGGGGACAT | + |
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Preference number: 4 (lower is better) Translates to: YKHYTQKLPGHKWSANWGLPGHK*SANWGH Trigger: ATGTCCCCAGTTTGCTGACCATTTGTGGCCAGGAAG...TCCCCAGTTTGCTGACCATTTGTGGCCAGGAAGCTTCTGTGTATAATGCTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| 3UTR CAA 72 bp | GGCCAAGACCTTGTCTTTGAGATTGGATCTGCGGACTaGAATTCCAGTCTTTCTTGCATGCATCACACCCAT | + |
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Preference number: 4 (lower is better) Translates to: GQDLVFEIGSAD*NSSLSCMHHTH Trigger: ATGGGTGTGATGCATGCAAGAAAGACTGGAATTCAAGTCCGCAGATCCAATCTCAAAGACAAGGTCTTGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR TCA 90 bp | CATTATACACAGAAGCTTCCTGGCCACAAATGGTCAGCAAACTGGGGACATCAGAAACTTCAACACATATaGAACAATCAGGAGAGCAGA | + |
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Preference number: 4 (lower is better) Translates to: HYTQKLPGHKWSANWGHQKLQHI*NNQESR Trigger: TCTGCTCTCCTGATTGTTTCATATGTGTTGAAGTTT...CTGATGTCCCCAGTTTGCTGACCATTTGTGGCCAGGAAGCTTCTGTGTATAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR TCA 90 bp | CTTAAACCATGTATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGACATCAGTACTACCTGTaGCAACTGCCCATTCTCCGA | + |
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Preference number: 4 (lower is better) Translates to: LKPCINVIHSPILCVGPRHQYYL*QLPILR Trigger: TCGGAGAATGGGCAGTTGTCACAGGTAGTACTGATG...TCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATACATGGTTTAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR TCA 90 bp | TATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGACCTTGTCTTTGTTGGATCTGCGGACTTaGATTCCAGTCTTTCTTGCA | + |
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Preference number: 4 (lower is better) Translates to: YKCNSFTNPLCRAKTLSLLDLRT*IPVFLA Trigger: TGCAAGAAAGACTGGAATTCAAGTCCGCAGATCCAA...CAAAGACAAGGTCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS-3UTR GCA 90 bp | TGCGGACTTGAATTCCAGTCTTTCTTGCATGCATCACACCCATATTCTATCATTGGTCTCAAGTATAATTaGTTATTTCACTGGAAACCT | + |
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Preference number: 4 (lower is better) Translates to: CGLEFQSFLHASHPYSIIGLKYN*LFHWKP Trigger: AGGTTTCCAGTGAAATAAGCAATTATACTTGAGACC...AATGATAGAATATGGGTGTGATGCATGCAAGAAAGACTGGAATTCAAGTCCGCA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS GCA 90 bp | GGCCCAGGCCTGGTCCGGGCCGCCGCGGGAGCGAGGACGCGGCGCTaGATCCGACTCACCTGCCCATTCTCCGAGCCCCGGGCCGACCCC | + |
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Preference number: 5 (lower is better) Translates to: GPGLVRAAAGARTRR*IRLTCPFSEPRADP Trigger: GGGGTCGGCCCGGGGCTCGGAGAATGGGCAGGTGAGTCGGATGCAGCGCCGCGTCCTCGCTCCCGCGGCGGCCCGGACCAGGCCTGGGCC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636722.1 |
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| CDS CCA 90 bp | GAAGGCCAGGAGCAGACCCCAGAACTAGTCATCACGGCCCAGGCCTaGTCCGGGCCGCCGCGGGAGCGAGGACGCGGCGCTGCATCCGAC | + |
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Preference number: 5 (lower is better) Translates to: EGQEQTPELVITAQA*SGPPRERGRGAASD Trigger: GTCGGATGCAGCGCCGCGTCCTCGCTCCCGCGGCGGCCCGGACCAGGCCTGGGCCGTGATGACTAGTTCTGGGGTCTGCTCCTGGCCTTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000636722.1 |
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| CDS GCA 90 bp | GGAGGAGGCGCCGGCCGTGACGGTGAGGATGACACTAATAGGCGCTaGTCCGACACCACTTTGGGCCTAAACCCCGCCCGCGGGGCCATA | + |
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Preference number: 5 (lower is better) Translates to: GGGAGRDGEDDTNRR*SDTTLGLNPARGAI Trigger: TATGGCCCCGCGGGCGGGGTTTAGGCCCAAAGTGGTGTCGGAGCAGCGCCTATTAGTGTCATCCTCACCGTCACGGCCGGCGCCTCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS-3UTR CAA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTTGCTCCGACACCACTTaGGGCCTAAACCCCGCCCGC | + |
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Preference number: 5 (lower is better) Translates to: VQNSPFGSFHHARQYQLCCSDTT*GLNPAR Trigger: GCGGGCGGGGTTTAGGCCCAAAGTGGTGTCGGAGCA...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS GCA 90 bp | CCACCGCGCCCGGCCGTCTCTGGGTTTTTATGTACGTGTGTGCTTTaGATTTTTCCCACTCCGAAGTCTAAGTCAAGGAATGCAACCCAC | + |
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Preference number: 5 (lower is better) Translates to: PPRPAVSGFLCTCVL*IFPTPKSKSRNATH Trigger: GTGGGTTGCATTCCTTGACTTAGACTTCGGAGTGGGAAAAATGCAAAGCACACACGTACATAAAAACCCAGAGACGGCCGGGCGCGGTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 90 bp | AGTAACCCAGGGCATAACCAGATCAGATCTCCAGTCTCCTCGAGTTaGTCTCTACCCTCTGAGGTCTTCTCTAGCCACAGTGCTGAGAAT | + |
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Preference number: 5 (lower is better) Translates to: SNPGHNQIRSPVSSS*SLPSEVFSSHSAEN Trigger: ATTCTCAGCACTGTGGCTAGAGAAGACCTCAGAGGGTAGAGATCAACTCGAGGAGACTGGAGATCTGATCTGGTTATGCCCTGGGTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534053.1 |
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| CDS CCA 90 bp | CAGCTAAACCATAGAGCTAGTCTAGAGAACCCCCAGATCAAGGGGTaGGGACAAGAGATGCATACTCAGGAATTCCAAGTTGGGTTATGT | + |
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Preference number: 5 (lower is better) Translates to: QLNHRASLENPQIKG*GQEMHTQEFQVGLC Trigger: ACATAACCCAACTTGGAATTCCTGAGTATGCATCTCTTGTCCCCACCCCTTGATCTGGGGGTTCTCTAGACTAGCTCTATGGTTTAGCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS-3UTR CAA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTTTCAGAATAGCCCCTTaGGATCTTTCCACCATGCCA | + |
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Preference number: 5 (lower is better) Translates to: VQNSPFGSFHHARQYQLCFRIAP*DLSTMP Trigger: TGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAA...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS TCA 90 bp | CAGGACACTCTAGAAAGGGAACACCCACCCCAGAAAACATGCCATTaGTTAGTAAGGCCACAAACTCAGAATGTACAGTGGTGCTTGACT | + |
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Preference number: 5 (lower is better) Translates to: QDTLEREHPPQKTCH*LVRPQTQNVQWCLT Trigger: AGTCAAGCACCACTGTACATTCTGAGTTTGTGGCCTTACTAATCAATGGCATGTTTTCTGGGGTGGGTGTTCCCTTTCTAGAGTGTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS-3UTR CAA 90 bp | GTTCAGAATAGCCCCTTTGGATCTTTCCACCATGCCAGGCAGTACCAATTGTGTCCTTCATTCCATGCTTaGCTAACTCTTCTGCATATG | + |
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Preference number: 5 (lower is better) Translates to: VQNSPFGSFHHARQYQLCPSFHA*LTLLHM Trigger: CATATGCAGAAGAGTTAGCAAAGCATGGAATGAAGG...ACACAATTGGTACTGCCTGGCATGGTGGAAAGATCCAAAGGGGCTATTCTGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS TCA 90 bp | AAATTGGACTACTTTGATCTTGTAGGAGAATTAAGTTGCACTGCCTaGCTGAACCACTTGGTGGTGCCACAAGTTAACTCTTCATGCAGC | + |
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Preference number: 5 (lower is better) Translates to: KLDYFDLVGELSCTA*LNHLVVPQVNSSCS Trigger: GCTGCATGAAGAGTTAACTTGTGGCACCACCAAGTGGTTCAGTCAGGCAGTGCAACTTAATTCTCCTACAAGATCAAAGTAGTCCAATTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 90 bp | TTGAGTTTCTTCGTTTTTGATATATACTCAGTAGTGGAATCAAGATaGCCCAGGATGGGGTTGGACACCAGAAAGACCAACTCTGTGACT | + |
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Preference number: 5 (lower is better) Translates to: LSFFVFDIYSVVESR*PRMGLDTRKTNSVT Trigger: AGTCACAGAGTTGGTCTTTCTGGTGTCCAACCCCATCCTGGGTCATCTTGATTCCACTACTGAGTATATATCAAAAACGAAGAAACTCAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532178.1 |
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| CDS TCA 90 bp | ACCACTTCTACAGACAGCAGGTTATTTTCTGTACACTGTAGAATGTaGCTGTGTCAAGAGGGCATAAAAAGGAACCAGCTGAAATTACTG | + |
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Preference number: 5 (lower is better) Translates to: TTSTDSRLFSVHCRM*LCQEGIKRNQLKLL Trigger: CAGTAATTTCAGCTGGTTCCTTTTTATGCCCTCTTGACACAGTCACATTCTACAGTGTACAGAAAATAACCTGCTGTCTGTAGAAGTGGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000533090.6 |
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| CDS-3UTR CAA 90 bp | ACCATGTATAAATGTAATTCATTCACCAATCCTCTGTGTAGGGCCAAGACCTTGCCTTCATTCCATGCTTaGCTAACTCTTCTGCATATG | + |
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Preference number: 5 (lower is better) Translates to: TMYKCNSFTNPLCRAKTLPSFHA*LTLLHM Trigger: CATATGCAGAAGAGTTAGCAAAGCATGGAATGAAGG...CAAGGTCTTGGCCCTACACAGAGGATTGGTGAATGAATTACATTTATACATGGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000395700.4 |
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| CDS TCA 90 bp | CAAAATCACCTCACAGTTAAATACCGAGGCTGTAACGTGAATTTCTaGCTCCTGGATATCATCAATTCTCTAAGAAACAGATGCTGTTTT | + |
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Preference number: 5 (lower is better) Translates to: QNHLTVKYRGCNVNF*LLDIINSLRNRCCF Trigger: AAAACAGCATCTGTTTCTTAGAGAATTGATGATATCCAGGAGTCAGAAATTCACGTTACAGCCTCGGTATTTAACTGTGAGGTGATTTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533090.6 |
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| CDS TCA 90 bp | CATAGAGTGCAGATATCTCTTCAATATATTGAGTTTCTTCGTTTTTaGTATATACTCAGTAGTGGAATCAAGATGACCCAGGATGGGGTT | + |
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Preference number: 5 (lower is better) Translates to: HRVQISLQYIEFLRF*YILSSGIKMTQDGV Trigger: AACCCCATCCTGGGTCATCTTGATTCCACTACTGAGTATATATCAAAAACGAAGAAACTCAATATATTGAAGAGATATCTGCACTCTATG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532178.1 |
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| CDS TCA 90 bp | AACACAGGGAATACTTTAATGAACCTGGCTAAAATTAGTCTTGCCTaGAATGTAATACTGGCACAGAGTTCTTCAAACAATGAAGGATTT | + |
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Preference number: 5 (lower is better) Translates to: NTGNTLMNLAKISLA*NVILAQSSSNNEGF Trigger: AAATCCTTCATTGTTTGAAGAACTCTGTGCCAGTATTACATTTCAGGCAAGACTAATTTTAGCCAGGTTCATTAAAGTATTCCCTGTGTT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000533090.6 |
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| CDS GCA 72 bp | GCGGGAGCGAGGACGCGGCGCTGCATCCGACTCACCTaGCCATTCTCCGAGCCCCGGGCCGACCCCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: AGARTRRCIRLT*PFSEPRADPRL Trigger: GAGGCGGGGGTCGGCCCGGGGCTCGGAGAATGGGCAGGTGAGTCGGATGCAGCGCCGCGTCCTCGCTCCCGC 76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000636722.1 |
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| CDS GCA 72 bp | GCCGGCCGTGACGGTGAGGATGACACTAATAGGCGCTaGTCCGACACCACTTTGGGCCTAAACCCCGCCCGC | + |
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Preference number: 6 (lower is better) Translates to: AGRDGEDDTNRR*SDTTLGLNPAR Trigger: GCGGGCGGGGTTTAGGCCCAAAGTGGTGTCGGAGCAGCGCCTATTAGTGTCATCCTCACCGTCACGGCCGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS TCA 72 bp | CTAGGCCTCACTACCTTCGTGAATGAAAAGAGCGAGTaGATGAATCCAGGAGGAGGCGCCGGCCGTGACGGT | + |
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Preference number: 6 (lower is better) Translates to: LGLTTFVNEKSE*MNPGGGAGRDG Trigger: ACCGTCACGGCCGGCGCCTCCTCCTGGATTCATTCACTCGCTCTTTTCATTCACGAAGGTAGTGAGGCCTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000278353.10 ENST00000531185.5 |
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| CDS TCA 72 bp | ACTACCTGTGACAACTTCGTGAATGAAAAGAGCGAGTaGATGAATCCAGGAGGAGGCGCCGGCCGTGACGGT | + |
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Preference number: 6 (lower is better) Translates to: TTCDNFVNEKSE*MNPGGGAGRDG Trigger: ACCGTCACGGCCGGCGCCTCCTCCTGGATTCATTCACTCGCTCTTTTCATTCACGAAGTTGTCACAGGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000527433.6 |
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| CDS TCA 72 bp | GGGCATAACCAGATCAGATCTCCAGTCTCCTCGAGTTaGTCTCTACCCTCTGAGGTCTTCTCTAGCCACAGT | + |
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Preference number: 6 (lower is better) Translates to: GHNQIRSPVSSS*SLPSEVFSSHS Trigger: ACTGTGGCTAGAGAAGACCTCAGAGGGTAGAGATCAACTCGAGGAGACTGGAGATCTGATCTGGTTATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000534053.1 |
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| CDS GCA 72 bp | CGCGCCCGGCCGTCTCTGGGTTTTTATGTACGTGTGTaGTTTGCATTTTTCCCACTCCGAAGTCTAAGTCAA | + |
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Preference number: 6 (lower is better) Translates to: RARPSLGFYVRV*FAFFPLRSLSQ Trigger: TTGACTTAGACTTCGGAGTGGGAAAAATGCAAAGCACACACGTACATAAAAACCCAGAGACGGCCGGGCGCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS CAA 90 bp | GCAGGACACTCTAGAAAGGGAACACCCACCCCAGAAAACATGCCATaGATTAGTAAGGCCACAAACTCAGAATGTACAGTGGTGCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: AGHSRKGTPTPENMP*ISKATNSECTVVLD Trigger: GTCAAGCACCACTGTACATTCTGAGTTTGTGGCCTTACTAATCAATGGCATGTTTTCTGGGGTGGGTGTTCCCTTTCTAGAGTGTCCTGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | TTGAGATCTGTTCCATTCTATGGATTTCCGTCCTGCTaGGACCTAGAAGGAGTGGTCCCATGTCTCTGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LRSVPFYGFPSC*DLEGVVPCLWF Trigger: AAACCAGAGACATGGGACCACTCCTTCTAGGTCTCAGCAGGACGGAAATCCATAGAATGGAACAGATCTCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS GCA 72 bp | CCGGCCGTCTCTGGGTTTTTATGTACGTGTGTGCTTTaGATTTTTCCCACTCCGAAGTCTAAGTCAAGGAAT | + |
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Preference number: 6 (lower is better) Translates to: PAVSGFLCTCVL*IFPTPKSKSRN Trigger: ATTCCTTGACTTAGACTTCGGAGTGGGAAAAATGCAAAGCACACACGTACATAAAAACCCAGAGACGGCCGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | CTAGAAAGGGAACACCCACCCCAGAAAACATGCCATTaGTTAGTAAGGCCACAAACTCAGAATGTACAGTGG | + |
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Preference number: 6 (lower is better) Translates to: LEREHPPQKTCH*LVRPQTQNVQW Trigger: CCACTGTACATTCTGAGTTTGTGGCCTTACTAATCAATGGCATGTTTTCTGGGGTGGGTGTTCCCTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS CAA 90 bp | AAGAACCCCAGATGGAGTGCTGTCACTCTCTATCTTCCTCTTTCCTaGTTGCTGCAGCCACAGACTCATACTAAGTATGAAGTACTTCAA | + |
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Preference number: 6 (lower is better) Translates to: KNPRWSAVTLYLPLS*LLQPQTHTKYEVLQ Trigger: TTGAAGTACTTCATACTTAGTATGAGTCTGTGGCTGCAGCAACAAGGAAAGAGGAAGATAGAGAGTGACAGCACTCCATCTGGGGTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS CAA 72 bp | TCTAGAAAGGGAACACCCACCCCAGAAAACATGCCATaGATTAGTAAGGCCACAAACTCAGAATGTACAGTG | + |
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Preference number: 6 (lower is better) Translates to: SRKGTPTPENMP*ISKATNSECTV Trigger: CACTGTACATTCTGAGTTTGTGGCCTTACTAATCAATGGCATGTTTTCTGGGGTGGGTGTTCCCTTTCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | TACTTTGATCTTGTAGGAGAATTAAGTTGCACTGCCTaGCTGAACCACTTGGTGGTGCCACAAGTTAACTCT | + |
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Preference number: 6 (lower is better) Translates to: YFDLVGELSCTA*LNHLVVPQVNS Trigger: AGAGTTAACTTGTGGCACCACCAAGTGGTTCAGTCAGGCAGTGCAACTTAATTCTCCTACAAGATCAAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | GTCCTGAGTCATGATACAAGAGGTCCTTCTGTAGTTTaGAATAACCTGGGCATGGTAGTTCAACAAAGAGTG | + |
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Preference number: 6 (lower is better) Translates to: VLSHDTRGPSVV*NNLGMVVQQRV Trigger: CACTCTTTGTTGAACTACCATGCCCAGGTTATTTCAAACTACAGAAGGACCTCTTGTATCATGACTCAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | TTCGTTTTTGATATATACTCAGTAGTGGAATCAAGATaGCCCAGGATGGGGTTGGACACCAGAAAGACCAAC | + |
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Preference number: 6 (lower is better) Translates to: FVFDIYSVVESR*PRMGLDTRKTN Trigger: GTTGGTCTTTCTGGTGTCCAACCCCATCCTGGGTCATCTTGATTCCACTACTGAGTATATATCAAAAACGAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000532178.1 |
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| CDS CAA 72 bp | TTAGTAAGGCCACAAACTCAGAATGTACAGTGGTGCTaGACTGCTCTTAGTGGTAGAAACATCTGTATCTTT | + |
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Preference number: 6 (lower is better) Translates to: LVRPQTQNVQWC*TALSGRNICIF Trigger: AAAGATACAGATGTTTCTACCACTAAGAGCAGTCAAGCACCACTGTACATTCTGAGTTTGTGGCCTTACTAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | CTCACAGTTAAATACCGAGGCTGTAACGTGAATTTCTaGCTCCTGGATATCATCAATTCTCTAAGAAACAGA | + |
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Preference number: 6 (lower is better) Translates to: LTVKYRGCNVNF*LLDIINSLRNR Trigger: TCTGTTTCTTAGAGAATTGATGATATCCAGGAGTCAGAAATTCACGTTACAGCCTCGGTATTTAACTGTGAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533090.6 |
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| CDS CCA 72 bp | TTTTTGCCATCTTCTTCCCTCCCTTCGTATGTAACATaGTATAAATTGGACTACTTTGATCTTGTAGGAGAA | + |
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Preference number: 6 (lower is better) Translates to: FLPSSSLPSYVT*YKLDYFDLVGE Trigger: TTCTCCTACAAGATCAAAGTAGTCCAATTTATACCATGTTACATACGAAGGGAGGGAAGAAGATGGCAAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS CAA 72 bp | CTCAACATTGAGACAGAACCACCAAGTAGGAGATCTTaGATACTTTATTCTTCTAATGGGATAATGCCAACT | + |
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Preference number: 6 (lower is better) Translates to: LNIETEPPSRRS*ILYSSNGIMPT Trigger: AGTTGGCATTATCCCATTAGAAGAATAAAGTATCAAAGATCTCCTACTTGGTGGTTCTGTCTCAATGTTGAG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS CAA 90 bp | CTTAGTAAACTCAACATTGAGACAGAACCACCAAGTAGGAGATCTTaGATACTTTATTCTTCTAATGGGATAATGCCAACTTTCTCCATA | + |
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Preference number: 6 (lower is better) Translates to: LSKLNIETEPPSRRS*ILYSSNGIMPTFSI Trigger: TATGGAGAAAGTTGGCATTATCCCATTAGAAGAATAAAGTATCAAAGATCTCCTACTTGGTGGTTCTGTCTCAATGTTGAGTTTACTAAG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000525736.1 |
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| CDS TCA 72 bp | TATATGTTATCAGAAGAAATATCCTGCCTACCAAGATaGCTTAAGCTTTCTAACCTCAAGAGCTCACATAAA | + |
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Preference number: 6 (lower is better) Translates to: YMLSEEISCLPR*LKLSNLKSSHK Trigger: TTTATGTGAGCTCTTGAGGTTAGAAAGCTTAAGTCATCTTGGTAGGCAGGATATTTCTTCTGATAACATATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000533090.6 |
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