RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HSD11B1L (Homo sapiens)

Ensembl gene IDs: ENSG00000167733

Ensembl transcript IDs: ENST00000301382.8, ENST00000339423.7, ENST00000342970.6, ENST00000411793.6, ENST00000422535.6, ENST00000423665.6, ENST00000577257.5, ENST00000577701.1, ENST00000577917.5, ENST00000577920.1, ENST00000578046.1, ENST00000578167.5, ENST00000578832.5, ENST00000579559.1, ENST00000579562.5, ENST00000581423.1, ENST00000581521.5, ENST00000581773.5, ENST00000581893.5, ENST00000582346.5, ENST00000583928.5, ENST00000584904.5, ENST00000616276.4

Found 590 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGCGTaGCGCCGCCGCGGATCACGGCCAGGGCTGCCTTGGGCCCCGGGG +
Preference number: 1 (lower is better)
Translates to: TAGGNATGRRRRPRA*RRRGSRPGLPWAPG
Trigger: CCCCGGGGCCCAAGGCAGCCCTGGCCGTGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGT
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR CCA 90 bp CCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGA +
Preference number: 1 (lower is better)
Translates to: PAPAAGSRRSRPAQT*PPSREWRTTWARGR
Trigger: TCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
3UTR CCA 90 bp GCAGCGAGGACACCACCACCAGGGAGCCCTTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTA +
Preference number: 1 (lower is better)
Translates to: AARTPPPGSPCCPSG*AAPATSVARSSQSL
Trigger: TAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCAAGGGCTCCCTGGTGGTGGTGTCCTCGCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR GCA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTC +
Preference number: 1 (lower is better)
Translates to: MEAVTSSIMAKQVRP*KSPTKAPNTGHLHL
Trigger: GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp ATCACGGCCAGGGCTGCCTTGGGCCCCGGGGCCGCCTTGACCCTCGTGACTCCCGACAGGAGGGCACGGTaGGGACTGCGGCTGGGGCTG +
Preference number: 2 (lower is better)
Translates to: ITARAALGPGAALTLVTPDRRAR*GLRLGL
Trigger: CAGCCCCAGCCGCAGTCCCCACCGTGCCCTCCTGTC...GGGAGTCACGAGGGTCAAGGCGGCCCCGGGGCCCAAGGCAGCCCTGGCCGTGAT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000578046.1
3UTR-3UTR GCA 90 bp GCCTTGACCCTCGTGACTCCCCTGACTGCCTCGGCGGCGGAGGCGCGATCTCGGGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 2 (lower is better)
Translates to: ALTLVTPLTASAAEARSRATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...CCGAGATCGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACGAGGGTCAAGGC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR GCA 90 bp GGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCGCGGATCATGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: GNATGRRRRPRAWRRRGSWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...TGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR GCA 90 bp CCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 2 (lower is better)
Translates to: PAAGSRRSRPAQTWPPSRHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...CCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
3UTR-3UTR GCA 90 bp GCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: AGAVASAGASTAGGNATGWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...ACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR CCA 90 bp GCACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 2 (lower is better)
Translates to: ARPAPAAGSRRSRPAQTWCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
3UTR-3UTR TCA 90 bp ACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCAAAGTTTACCTGCATaGGCCAGCGAGTTGCCTGGG +
Preference number: 2 (lower is better)
Translates to: TAGGNATGRRRRPRAWRRQSLPA*ASELPG
Trigger: CCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTG...GCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR TCA 90 bp CAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCCCTCAGTGTGGGCAGTaGGCACCAGGTGGGAGCCCA +
Preference number: 2 (lower is better)
Translates to: QRKLGRRVGSGERRGHAAPQCGQ*APGGSP
Trigger: TGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGG...GGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584904.5
3UTR-3UTR GCA 90 bp CCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGAGGACAGTCCAGCCCGCCTTCTaGAGGAGAGCCTCAGTGTGG +
Preference number: 2 (lower is better)
Translates to: PPSREWRTTWARGRAARTVQPAF*RRASVW
Trigger: CCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGAC...TGTCCTCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584904.5
3UTR-3UTR CCA 90 bp GGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: GAVASAGASTAGGNATGRRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...TCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR GCA 90 bp CGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: RGRGSQRRSKHSRRKRHGVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...CCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR CCA 90 bp GCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGAAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 2 (lower is better)
Translates to: AEEAVQRKLGRRVGSGERSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...TCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR-3UTR CCA 90 bp AGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 2 (lower is better)
Translates to: RSRPAQTWPPSREWRTTWCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCT
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR-3UTR TCA 90 bp CACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: HVQLPPQGAEEAVQRKLGSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp TGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: WRINQARGRGSQRRSKHSLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...GCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: APEQAQQAETPRVEDAGRLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...GCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 2 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp CAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTACCTGCATGAGCCAAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 2 (lower is better)
Translates to: QRPRRQLHVAHKVYLHEPSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...TGGCTCATGCAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR-3UTR TCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAATCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp CTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGACTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: LGRRVGSGERRGHAAEQRLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...TCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR-3UTR GCA 90 bp CCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGAGGACACTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 2 (lower is better)
Translates to: PPSREWRTTWARGRAARTLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...TGTCCTCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR-3UTR TCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 2 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 2 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: GSSHVINHGQTGEALQVPAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp CAGGCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTACCTGGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: QAGQRPRRQLHVAHKVYLGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...CAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 2 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 2 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp AGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: RSRPAQTWPPSREWRTTWVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...CCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR GCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: GSSHVINHGQTGEALQVPRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 2 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 2 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 2 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: VINHGQTGEALQVPDKGAGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 2 (lower is better)
Translates to: GSSHVINHGQTGEALQVPLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 2 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR TCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: GSSHVINHGQTGEALQVPSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACATCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 2 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 2 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: GSSHVINHGQTGEALQVPGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp CCGTCAGGCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTATTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: PSGWAAPATSVARSSQSLLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...TAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTGACGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 2 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 2 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 2 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 2 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: GSSHVINHGQTGEALQVPVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR CAA 90 bp TCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTaGCTTTTCTGTCTTGATGACTTCATCTTGGGCTGTGGCCACCCT +
Preference number: 2 (lower is better)
Translates to: SQAVTGSRCPSFFSV*LFCLDDFILGCGHP
Trigger: AGGGTGGCCACAGCCCAAGATGAAGTCATCAAGACAGAAAAGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 2 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACATTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 2 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 2 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 2 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 2 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 2 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 2 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 2 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 2 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 2 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR TCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 2 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 2 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR GCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 2 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 2 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 2 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR CCA 72 bp GGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGCGTaGCGCCGCCGCGGATCACGGCCAGGGCTGCCTTGG +
Preference number: 3 (lower is better)
Translates to: GNATGRRRRPRA*RRRGSRPGLPW
Trigger: CCAAGGCAGCCCTGGCCGTGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCC
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR CCA 72 bp GGTGCTCAGGCTGCCGCGGCCGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAG +
Preference number: 3 (lower is better)
Translates to: GAQAAAAVTLSS*RINQARGRGSQ
Trigger: CTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGCAGCCTGAGCACC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR CAA 90 bp CGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 3 (lower is better)
Translates to: RGRGSQRRSKHSRRKRHGLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR-3UTR CAA 90 bp GGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGAGGATCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 3 (lower is better)
Translates to: GRRVGSGERRGHAAEQRGSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...TCCTCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582346.5
3UTR CCA 72 bp AGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGCGGCCGAGCAGCGAGG +
Preference number: 3 (lower is better)
Translates to: SRPAQTWPPSRE*RTTWARGRAAR
Trigger: CCTCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR-3UTR CAA 90 bp CGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: RGRGSQRRSKHSRRKRHGLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...CCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
3UTR CCA 72 bp GTAGTCCAGCCCGCCTTCTGCAGGAGAGCCTCAGTGTaGGCAGTGAGCACCAGGTGGGAGCCCAGACGCGCG +
Preference number: 3 (lower is better)
Translates to: VVQPAFCRRASV*AVSTRWEPRRA
Trigger: CGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGACTAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584904.5
3UTR-3UTR CAA 90 bp TGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 3 (lower is better)
Translates to: WRINQARGRGSQRRSKHSRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...GCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR GCA 72 bp CCCAGGACGCACATGGTGATGGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAG +
Preference number: 3 (lower is better)
Translates to: PRTHMVMATFTS*TSSSRRREPKK
Trigger: CTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGCCATCACCATGTGCGTCCTGGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR CCA 72 bp GCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCA +
Preference number: 3 (lower is better)
Translates to: AAGSRRSRPAQT*PPSREWRTTWA
Trigger: TGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
3UTR-3UTR CAA 90 bp GCACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 3 (lower is better)
Translates to: ARPAPAAGSRRSRPAQTWLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
3UTR-3UTR CAA 90 bp CTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGACGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 3 (lower is better)
Translates to: LGRRVGSGERRGHAAEQRRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...TCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
3UTR TCA 72 bp AGCCCGCCTTCTGCAGGAGAGCCTCAGTGTGGGCAGTaGGCACCAGGTGGGAGCCCAGACGCGCGTAGTGAT +
Preference number: 3 (lower is better)
Translates to: SPPSAGEPQCGQ*APGGSPDARSD
Trigger: ATCACTACGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGCGGGCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000584904.5
3UTR-3UTR CAA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR GCA 72 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAGAGACCCCAGCTAGGG +
Preference number: 3 (lower is better)
Translates to: PCHQVDEQCRRP*RCEEYQRPQLG
Trigger: CCCTAGCTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR CCA 72 bp GGGTGTCTCTGTGAGTGTTCTGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGG +
Preference number: 3 (lower is better)
Translates to: GCLCECSGSRDS*REEHCRLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAACACTCACAGAGACACCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 3 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR GCA 72 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCGCCTAACACGGGGCAC +
Preference number: 3 (lower is better)
Translates to: VTSSIMAKQVRP*KSPTKAPNTGH
Trigger: GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 3 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFALDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR CCA 72 bp AGAATAAATCAGGGACTTAAAGGCGCAGGCAGGAGATaGAGAGGGGTCCATGGGTGGCTCAAGGGTGGCGTG +
Preference number: 3 (lower is better)
Translates to: RINQGLKGAGRR*RGVHGWLKGGV
Trigger: CACGCCACCCTTGAGCCACCCATGGACCCCTCTCCATCTCCTGCCTGCGCCTTTAAGTCCCTGATTTATTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 12 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR TCA 72 bp TGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACA +
Preference number: 3 (lower is better)
Translates to: WKQSRHQSWPNR*GLASPRQRRLT
Trigger: TGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 3 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 3 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 3 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 3 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
3UTR-3UTR CAA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 3 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp ACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCGCGGATCACGGCCAGGGGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: TGRRRRPRAWRRRGSRPGATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...CCCTGGCCGTGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGT
76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR GCA 90 bp CGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: RGRGSQRRSKHSRRKRHGPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...CCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp CGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: RGRGSQRRSKHSRRKRHGSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...CCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp ACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCGCGGATCACGGCCAGGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: TGRRRRPRAWRRRGSRPGPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CCCTGGCCGTGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGT
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR TCA 90 bp TCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACTGTCCGGGCCTCACCTaGCTGCCTCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SWRINQARGRGSQRRSKHCPGLT*LPRRRR
Trigger: CCTCCGCCGCCGAGGCAGTCAGGTGAGGCCCGGACA...GTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGA
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578046.1
CDS-3UTR CCA 90 bp ACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCGCGGATCACGGCCAGGGAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: TGRRRRPRAWRRRGSRPGRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...CCCTGGCCGTGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGT
73% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp GCTGCGGGCTCGCGTGCCGGCCGGGGCGCCGCCGATGTGGTTCAGCACGAGGTAGCAACAGTGCCCGCCTaGTCTTCGCCTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: AAGSRAGRGAADVVQHEVATVPA*SSPPSR
Trigger: CCTGCTGGGAGGCGAAGACCAGGCGGGCACTGTTGC...TACCTCGTGCTGAACCACATCGGCGGCGCCCCGGCCGGCACGCGAGCCCGCAGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582346.5
CDS-3UTR CCA 90 bp TCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: SWRINQARGRGSQRRSKHSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp CCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: PAPAAGSRRSRPAQTWPPSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...CGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
CDS-3UTR CCA 90 bp GCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: AGAVASAGASTAGGNATGCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...ACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCCCGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp GCCGCGGCCGTGACGTTGAGCTCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: AAAVTLSSWRINQARGRGEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...ACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp ATCACGGCCAGGGCTGCCTTGGGCCCCGGGGCCGCCTTGACCCTCGTGACTCCCGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: ITARAALGPGAALTLVTPEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...GGGAGTCACGAGGGTCAAGGCGGCCCCGGGGCCCAAGGCAGCCCTGGCCGTGAT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp TCGCGTGCCGGCCGGGGCGCCGCCGATGTGGTTCAGCACGAGGTAGTCCAGCCCGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: SRAGRGAADVVQHEVVQPEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...GGGCTGGACTACCTCGTGCTGAACCACATCGGCGGCGCCCCGGCCGGCACGCGA
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp GTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCGGCAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: VYLHEPASCLGAAGSRAGSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GCCGGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAAC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000578832.5
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp ACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: TAGGNATGRRRRPRAWRRRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...GCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR GCA 90 bp CAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: QRKLGRRVGSGERRGHAAPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...GGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTG
70% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS-3UTR GCA 90 bp GGCTCGCGTGCCGGCCGGGGCGCCGCCGATGTGGTTCAGCACGAGGTAGTCCAGTTGTCCAGCGCAAACTaGACCACGCTCTCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GSRAGRGAADVVQHEVVQLSSAN*TTLSGA
Trigger: GGCGCCCGAGAGCGTGGTGCAGTTTGCGCTGGACAA...CTGGACTACCTCGTGCTGAACCACATCGGCGGCGCCCCGGCCGGCACGCGAGCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582346.5
CDS-3UTR CCA 90 bp GGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGAGGACCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: GRRVGSGERRGHAAEQRGPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...TCCTCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp GCGGGCTCGCGTGCCGGCCGGGGCGCCGCCGATGTGGTTCAGCACGAGGTAGTCGCGCTCCCTGGAGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: AGSRAGRGAADVVQHEVVALPGG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCTCCAGGGAGCGC...GACTACCTCGTGCTGAACCACATCGGCGGCGCCCCGGCCGGCACGCGAGCCCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584904.5
CDS-3UTR GCA 90 bp ATCACGGCCAGGGCTGCCTTGGGCCCCGGGGCCGCCTTGACCCTCGTGACTCCCTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ITARAALGPGAALTLVTPWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...GGGAGTCACGAGGGTCAAGGCGGCCCCGGGGCCCAAGGCAGCCCTGGCCGTGAT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR GCA 90 bp CCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGGTCCAGCCCGCCTTCTaGAGGAGAGCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: PAPAAGSRRSRPAQTWPPVQPAF*RRASVW
Trigger: CCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGAC...CGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGG
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS-3UTR CCA 90 bp GCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: AAGSRRSRPAQTWPPSRECCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
CDS-3UTR CCA 90 bp GCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: APEQAQQAETPRVEDAGRRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp TCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: SWRINQARGRGSQRRSKHRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGA
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR GCA 90 bp ACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCGCGGATCACGGCCAGGGCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: TGRRRRPRAWRRRGSRPGLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...CCCTGGCCGTGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR GCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAACCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
68% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCGAGCAGCGAGTCCAGCCCGCCTTCTaGAGGAGAGCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LGRRVGSGERRGHAAEQRVQPAF*RRASVW
Trigger: CCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGAC...TCGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000584904.5
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: APEQAQQAETPRVEDAGRVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...GCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp GCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: APEQAQQAETPRVEDAGRLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp CAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGACGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: QLPPQGAEEAVQRKLGRRRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...TCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582346.5
CDS-3UTR TCA 90 bp CAGGCTGCCGCGGCCGTGACGTTGAGCTCCTGGCGGATAAACCAGGCCCGCGGGTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QAAAAVTLSSWRINQARGSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...CCCGCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGCAGCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR GCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGCGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGTAGTCCAGCCCGCCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: AGASTAGGNATGRRRRPRVVQPA*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGGCGGGCTGGACTAC...GCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000578046.1
CDS-3UTR CCA 90 bp AGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: RSRPAQTWPPSREWRTTWSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...CCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCT
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCATGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: SRPAQTWPPSREWRTTWACCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...TGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCT
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp AAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KVYLHEPASCLGAAGSRAEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...GGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp CAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QRKLGRRVGSGERRGHAARPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp TCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: SWRINQARGRGSQRRSKHGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp AAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCGAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: KFTCMSQRVAWGLRARVPSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...CGGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578832.5
ENST00000579562.5
CDS-3UTR CCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGGACAGGAGGGCACGGTaGGGACTGCGGCTGGGGCTG +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGDRRAR*GLRLGL
Trigger: CAGCCCCAGCCGCAGTCCCCACCGTGCCCTCCTGTC...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578046.1
CDS-3UTR CCA 90 bp AAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCGACAGGGGACAGAGGTaGCCGGCACAGGCCCGCTCA +
Preference number: 4 (lower is better)
Translates to: KVYLHEPASCLGAAGSRADRGQR*PAQARS
Trigger: TGAGCGGGCCTGTGCCGGCCACCTCTGTCCCCTGTC...GGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000578832.5
CDS-3UTR CCA 90 bp CGTGCCGGCCGGGGCGCCGCCGATGTGGTTCAGCACGAGGTAGTCCAGCCCGCCCAGTTCCCTACCACCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: RAGRGAADVVQHEVVQPAQFPTT*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGGTGGTAGGGAACTG...GGCGGGCTGGACTACCTCGTGCTGAACCACATCGGCGGCGCCCCGGCCGGCACG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000582346.5
CDS-3UTR TCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAAGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: HVQLPPQGAEEAVQRKLGGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...GCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: CTSSSRRREPKKPSSANLRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...CAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTGCA
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
CDS-3UTR CCA 90 bp GGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGATCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: GAVASAGASTAGGNATGRSLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...TCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS-3UTR TCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTCGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFARDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: SWRINQARGRGSQRRSKHVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGCAACAGTGCCCGCCTaGTCTTCGCCTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSATVPA*SSPPSR
Trigger: CCTGCTGGGAGGCGAAGACCAGGCGGGCACTGTTGC...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000301382.8
ENST00000581893.5
CDS-3UTR CCA 90 bp GGCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTACCTGCATGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: GWAAPATSVARSSQSLPACCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...TGCAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCTCACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: AHKVYLHEPASCLGAAGSPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAGC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CCGCCGCGGATCACGGCCAGGGCTGCCTTGGGCCCCGGGGCCGCCTTGACCCTCTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: PPRITARAALGPGAALTLSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GAGGGTCAAGGCGGCCCCGGGGCCCAAGGCAGCCCTGGCCGTGATCCGCGGCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS-3UTR CCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCGGCGCTCCCTGGAGGCTaGCTGGGTCGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KFTCMSQRVAWGLRARVPALPGG*LGRSCH
Trigger: ATGACAACTTCGACCCAGCCAGCCTCCAGGGAGCGC...CGGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578832.5
ENST00000579562.5
CDS-3UTR CCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
63% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACACGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCCGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: GSSHVINHGQTGEALQVPRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFAPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAATGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGTTGTCCAGCGCAAACTaGACCACGCTCTCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSLSSAN*TTLSGA
Trigger: GGCGCCCGAGAGCGTGGTGCAGTTTGCGCTGGACAA...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GCTCACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGGTCCAGCCCGCCTTCTaGAGGAGAGCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: AHKVYLHEPASCLGAAGSVQPAF*RRASVW
Trigger: CCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGAC...CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000578832.5
ENST00000579562.5
ENST00000584904.5
CDS-3UTR GCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCGCCGAGATTTGCCATTaGACTCCAGCCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPAEICH*TPARSG
Trigger: GCCTGAGCGGGCTGGAGTGCAATGGCAAATCTCGGC...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGCTTCATGGTCCTGTGTaGGCCCGCTCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRLHGPV*ARSGLS
Trigger: ACTGAGGCCTGAGCGGGCCCACACAGGACCATGAAG...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCCTTCATGGTCCTGTGTaGGCCCGCTCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPLHGPV*ARSGLS
Trigger: ACTGAGGCCTGAGCGGGCCCACACAGGACCATGAAG...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TCCTGGCGGATAAACCAGGCCCGCGGGCGCGGTAGCCAGCGCCGGAGCAAGCACTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SWRINQARGRGSQRRSKHLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...GTGCTTGCTCCGGCGCTGGCTACCGCGCCCGCGGGCCTGGTTTATCCGCCAGGA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAACTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACGCGCTCCCTGGAGGCTaGCTGGGTCGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHALPGG*LGRSCH
Trigger: ATGACAACTTCGACCCAGCCAGCCTCCAGGGAGCGC...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCCTTCATGGTCCTGTGTaGGCCTGCAGAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPLHGPV*ACRGTG
Trigger: CCCTGTCCCTCTGCAGGCCCACACAGGACCATGAAG...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616276.4
CDS-3UTR CCA 90 bp AAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCAGCACTCGCGCTCCCTaGAGGCTGGGTCGAAGTTGT +
Preference number: 4 (lower is better)
Translates to: KVYLHEPASCLGAAGSRASTRAP*RLGRSC
Trigger: ACAACTTCGACCCAGCCTCCAGGGAGCGCGAGTGCT...GGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000584904.5
CDS-3UTR TCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAATCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGCCGGCCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: VYLHEPASCLGAAGSRAGLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...GCCGGCACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000578832.5
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR GCA 90 bp CAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGACTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: QLPPQGAEEAVQRKLGRRLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...TCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000582346.5
CDS-3UTR GCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFAATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACACCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: GSSHVINHGQTGEALQVPSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGATTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GAVASAGASTAGGNATGRLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...TCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCTCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCSLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPSLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHSLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTCTTCATGGTCCTGTGTaGGCCTGCAGAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: HKVYLHEPASCLGAAGSRLHGPV*ACRGTG
Trigger: CCCTGTCCCTCTGCAGGCCCACACAGGACCATGAAG...ACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578832.5
CDS-3UTR TCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAACAAAGTTTACCTGCATaGGCCAGCGAGTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQQSLPA*ASELPG
Trigger: CCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTG...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCCAAAGTTTACCTGCATaGGCCAGCGAGTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCQSLPA*ASELPG
Trigger: CCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTG...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGCAAAGTTTACCTGCATaGGCCAGCGAGTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRQSLPA*ASELPG
Trigger: CCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTG...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCTTCAGCCAGGCACCTaGCGCCTCTTTCCCCTCACG +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYLQPGT*RLFPLT
Trigger: CGTGAGGGGAAAGAGGCGTCAGGTGCCTGGCTGAAG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR GCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGGCAACAGTGCCCGCCTaGTCTTCGCCTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQATVPA*SSPPSR
Trigger: CCTGCTGGGAGGCGAAGACCAGGCGGGCACTGTTGC...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000301382.8
ENST00000411793.6
ENST00000577917.5
ENST00000581893.5
CDS-3UTR CCA 90 bp CCGTCAGGCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTACTTCATGGTCCTGTGTaGGCCCGCTCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: PSGWAAPATSVARSSQSLLHGPV*ARSGLS
Trigger: ACTGAGGCCTGAGCGGGCCCACACAGGACCATGAAG...TAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000579562.5
CDS-3UTR CCA 90 bp CCGTCAGGCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTAGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PSGWAAPATSVARSSQSLGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...TAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTGACGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: GSSHVINHGQTGEALQVPCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGAPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCTTCATGGTCCTGTGTaGGCCTGCAGAGGGACAGGG +
Preference number: 4 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGLHGPV*ACRGTG
Trigger: CCCTGTCCCTCTGCAGGCCCACACAGGACCATGAAG...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGCGTGGGAGAAGCACCTTCATaGTCCTGTGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: TKFTCMSQRVAWGLRARVGEAPS*SCVGLQ
Trigger: CTGCAGGCCCACACAGGACCATGAAGGTGCTTCTCC...CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000578832.5
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGGACAGGGGACAGAGGTaGCCGGCACAGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQDRGQR*PAQACL
Trigger: CAGGCATGCCTGTGCCGGCCACCTCTGTCCCCTGTC...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000616276.4
3UTR CAA 72 bp GCTGTCCGTCAGGCTGGGCAGCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTTTACCTGCATGAGCCA +
Preference number: 4 (lower is better)
Translates to: AVRQAGQRPRRQ*HVAHKVYLHEP
Trigger: TGGCTCATGCAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR TCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCAAAGTTTACCTGCATaGGCCAGCGAGTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGQSLPA*ASELPG
Trigger: CCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CAGGCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTACCTGTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: QAGQRPRRQLHVAHKVYLSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...CAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS-3UTR TCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCGTGACGTTGAGCTCCTaGCTGCCTCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLVTLSS*LPRRRR
Trigger: CCTCCGCCGCCGAGGCAGTCAGGAGCTCAACGTCAC...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
CDS-3UTR GCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGTTGTCCAGCGCAAACTaGACCACGCTCTCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQLSSAN*TTLSGA
Trigger: GGCGCCCGAGAGCGTGGTGCAGTTTGCGCTGGACAA...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000581521.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTTTGTCCAGCGCAAACTaGACCACGCTCTCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFALSSAN*TTLSGA
Trigger: GGCGCCCGAGAGCGTGGTGCAGTTTGCGCTGGACAA...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTTGTCCAGCGCAAACTaGACCACGCTCTCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGALSSAN*TTLSGA
Trigger: GGCGCCCGAGAGCGTGGTGCAGTTTGCGCTGGACAA...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCTGGGCAGCGCCCGCGACGTCAGTTGCACGTAGCTCACAAAGTTTACCTGCATCTTCATGGTCCTGTGTaGGCCCGCTCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: AGQRPRRQLHVAHKVYLHLHGPV*ARSGLS
Trigger: ACTGAGGCCTGAGCGGGCCCACACAGGACCATGAAG...ATGCAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR CCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGARPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 12 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTAGCTCACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: VAHKVYLHEPASCLGAAGSLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...GCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAGCTAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000578832.5
ENST00000579562.5
CDS-3UTR CCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGGAGAAGCACCTTCATaGTCCTGTGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGGEAPS*SCVGLQ
Trigger: CTGCAGGCCCACACAGGACCATGAAGGTGCTTCTCC...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000581773.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGAPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: EAVQRKLGRRVGSGERRGLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...CCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000579562.5
ENST00000582346.5
ENST00000584904.5
CDS-3UTR GCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGCGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGAWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTAGCTCACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: VAHKVYLHEPASCLGAAGKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...GCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAGCTAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS-3UTR GCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACATCCCGCCCTCTCGTTaGCGTGACAACCGCCTTGTA +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYIPPSR*RDNRLV
Trigger: TACAAGGCGGTTGTCACGGCAACGAGAGGGCGGGAT...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR CCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGAVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGALPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFALPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACACGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGGCGCTCCCTGGAGGCTaGCTGGGTCGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQALPGG*LGRSCH
Trigger: ATGACAACTTCGACCCAGCCAGCCTCCAGGGAGCGC...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTGCGCTCCCTGGAGGCTaGCTGGGTCGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFAALPGG*LGRSCH
Trigger: ATGACAACTTCGACCCAGCCAGCCTCCAGGGAGCGC...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGACAGGGGACAGAGGTaGCCGGCACAGGCATGCCTG +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKDRGQR*PAQACL
Trigger: CAGGCATGCCTGTGCCGGCCACCTCTGTCCCCTGTC...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581773.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: GSSHVINHGQTGEALQVPPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
58% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCGCACCTCCCAAGCCGTaGCTGGTTCCAGGTGCCCGT +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSAPPKP*LVPGAR
Trigger: ACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGC...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGGATCTCTCGGGCTCTaGCTTGTTTTCGGGTCACCT +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYGSLGL*LVFGSP
Trigger: AGGTGACCCGAAAACAAGTCAGAGCCCGAGAGATCC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR GCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAGCCGAGATTTGCCATTaGACTCCAGCCCGCTCAGGC +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTAEICH*TPARSG
Trigger: GCCTGAGCGGGCTGGAGTGCAATGGCAAATCTCGGC...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581521.5
ENST00000581773.5
CDS-3UTR CCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTGTAGTCCAGCCCGCCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFAVVQPA*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGGCGGGCTGGACTAC...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000301382.8
CDS-3UTR CCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFAGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GGCACCTGCACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: GTCTSQAVTGSRCPSFFSLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...CGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTGCAGGTGCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTTCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFASLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CACCTCCCAAGCCGTGACTGGTTCCAGGTGCCCGTCGTTTTTCTCGGTTTTGCTCAAAGTTTACCTGCATaGGCCAGCGAGTTGCCTGGG +
Preference number: 4 (lower is better)
Translates to: HLPSRDWFQVPVVFLGFAQSLPA*ASELPG
Trigger: CCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTG...AGCAAAACCGAGAAAAACGACGGGCACCTGGAACCAGTCACGGCTTGGGAGGTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACGTGACTCCCCTGACTaGCTCGGCGGCGGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTRDSPD*LGGGGA
Trigger: CGCGCCTCCGCCGCCGAGGCAGTCAGGGGAGTCACG...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGAQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCTTCATGGTCCTGTGTaGGCCCGCTCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLLHGPV*ARSGLS
Trigger: ACTGAGGCCTGAGCGGGCCCACACAGGACCATGAAG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVREWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGTAATCCAGATATTTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPCNPDI*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAAATATCTGGATTACA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTGTAATCCAGATATTTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHCNPDI*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAAATATCTGGATTACA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR TCA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTGTGACGTTGAGCTCCTaGCTGCCTCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPVTLSS*LPRRRR
Trigger: CCTCCGCCGCCGAGGCAGTCAGGAGCTCAACGTCAC...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
CDS-3UTR GCA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCATGAGCCAGCGAGTTaGCTGGGGGCTGCGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPHEPAS*LGAAGS
Trigger: CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATG...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTCCCCGGTGCTCAGGCTaGCGCGGCCGTGACGTTGAG +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLPRCSG*RGRDVE
Trigger: CTCAACGTCACGGCCGCGGCAGCCTGAGCACCGGGG...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGAVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAATCTTTCAAGTCTCAGTaGAAAAGTGACCTCCTTCAG +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQSFKSQ*KSDLLQ
Trigger: CTGAAGGAGGTCACTTTTGCACTGAGACTTGAAAGA...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS-3UTR CCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCGTAGTCCAGCCCGCCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLVVQPA*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGGCGGGCTGGACTAC...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000301382.8
ENST00000577917.5
CDS-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACAGCCAGCGAGTTGCCTaGGGGCTGCGGGCTCGCGTG +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHSQRVA*GLRARV
Trigger: CACGCGAGCCCGCAGCCCCCAGGCAACTCGCTGGCT...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGC +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRPPSRE*RTTWAR
Trigger: GCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGG...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: VINHGQTGEALQVPDKGASRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCGCGCTCCCTGGAGGCTaGCTGGGTCGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSALPGG*LGRSCH
Trigger: ATGACAACTTCGACCCAGCCAGCCTCCAGGGAGCGC...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCGCGCGGGCGCGGGTaGATCTCTCGGGCTCTGACT +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFPRGRG*ISRALT
Trigger: AGTCAGAGCCCGAGAGATCCACCCGCGCCCGCGCGG...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR TCA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAATCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTGTGACGTTGAGCTCCTaGCTGCCTCGGCGGCGGAGG +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLVTLSS*LPRRRR
Trigger: CCTCCGCCGCCGAGGCAGTCAGGAGCTCAACGTCAC...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
CDS-3UTR GCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTGCCACGTTCACGTCCTaGACGTCCAGCTCCCGCCGC +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLATFTS*TSSSRR
Trigger: GCGGCGGGAGCTGGACGTGCAGGACGTGAACGTGGC...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTTGTCCAGCGCAAACTaGACCACGCTCTCGGGCGCC +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSLSSAN*TTLSGA
Trigger: GGCGCCCGAGAGCGTGGTGCAGTTTGCGCTGGACAA...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000616276.4
CDS-3UTR GCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCGTCCAGCCCGCCTTCTaGAGGAGAGCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLVQPAF*RRASVW
Trigger: CCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGAC...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000411793.6
ENST00000579562.5
ENST00000581893.5
CDS-3UTR GCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGTCCAGCCCGCCTTCTaGAGGAGAGCCTCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRVQPAF*RRASVW
Trigger: CCACACTGAGGCTCTCCTGCAGAAGGCGGGCTGGAC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000581893.5
CDS-3UTR GCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTTTCCCCTCACGGTaGCAGGGCCGGGCCGAACTA +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPSFPSR*QGRAEL
Trigger: TAGTTCGGCCCGGCCCTGGCACCGTGAGGGGAAAGA...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTGCTGTCCGTCAGGCTaGGCAGCGCCCGCGACGTCA +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLCCPSG*AAPATS
Trigger: TGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGCA...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACAGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTGAGTGGAGAACGACGTaGGCACGCGGCCGAGCAGCG +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFEWRTT*ARGRAA
Trigger: CGCTGCTCGGCCGCGTGCCCACGTCGTTCTCCACTC...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACATCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTGCCCTCTCGTTGCCGTaGCAACCGCCTTGTAGGCAC +
Preference number: 4 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPALSLP*QPPCRH
Trigger: GTGCCTACAAGGCGGTTGTCACGGCAACGAGAGGGC...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR GCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACACTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACAGCAACAGTGCCCGCCTaGTCTTCGCCTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTATVPA*SSPPSR
Trigger: CCTGCTGGGAGGCGAAGACCAGGCGGGCACTGTTGC...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301382.8
ENST00000411793.6
ENST00000577917.5
ENST00000581893.5
CDS-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACGCAACAGTGCCCGCCTaGTCTTCGCCTCCCAGCAGG +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHATVPA*SSPPSR
Trigger: CCTGCTGGGAGGCGAAGACCAGGCGGGCACTGTTGC...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000301382.8
ENST00000411793.6
ENST00000577917.5
ENST00000581893.5
CDS-3UTR CCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCTTCATGGTCCTGTGTaGGCCCGCTCAGGCCTCAGT +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSLHGPV*ARSGLS
Trigger: ACTGAGGCCTGAGCGGGCCCACACAGGACCATGAAG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000579562.5
CDS-3UTR CCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCGGAGAAGCACCTTCATaGTCCTGTGTGGGCCCGCTC +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSGEAPS*SCVGPL
Trigger: GAGCGGGCCCACACAGGACCATGAAGGTGCTTCTCC...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
CDS-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCCTCCCAAGCCGTGACTaGTTCCAGGTGCCCGTCGTT +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPLPSRD*FQVPVV
Trigger: AACGACGGGCACCTGGAACCAGTCACGGCTTGGGAG...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTAGCACTCGCGCTCCCTaGAGGCTGGCTGGGTCGAAG +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLSTRAP*RLAGSK
Trigger: CTTCGACCCAGCCAGCCTCCAGGGAGCGCGAGTGCT...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTCAGGGGTGTCTCTGTaGGTGTTCTGGCTCCAGGGA +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLSGVSL*VFWLQG
Trigger: TCCCTGGAGCCAGAACACTCACAGAGACACCCCTGA...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGG +
Preference number: 4 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTRPAQT*PPSREW
Trigger: CCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACAAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTAGGAACATTGCCGTCTaGGACTGGAGGGGCACCCCC +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLRNIAV*DWRGTP
Trigger: GGGGGTGCCCCTCCAGTCCCAGACGGCAATGTTCCT...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGC +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFRCRRP*GRPASG
Trigger: GCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCG...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000616276.4
CDS-3UTR CCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCTGGAGGCTGGCTaGGTCGAAGTTGTCATCCCA +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPSLEAG*VEVVIP
Trigger: TGGGATGACAACTTCGACCCAGCCAGCCTCCAGGGA...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000616276.4
CDS-3UTR CCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGGAGAAGCACCTTCATaGTCCTGTGTGGGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRGEAPS*SCVGLQ
Trigger: CTGCAGGCCCACACAGGACCATGAAGGTGCTTCTCC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581773.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTCCAGGACGCACATGGTaGTGGCCACGTTCACGTCCT +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLPGRTW*WPRSRP
Trigger: AGGACGTGAACGTGGCCATCACCATGTGCGTCCTGG...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACATGGAGGGAGGAACATTaGCGTCTGGGACTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTWREEH*RLGLEG
Trigger: CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCA...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTGTGACGTTGAGCTCCTaGCGGATAAACCAGGCCCGC +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLVTLSS*RINQAR
Trigger: GCGGGCCTGGTTTATCCGCCAGGAGCTCAACGTCAC...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACGCGCTCCCTGGAGGCTaGCTGGGTCGAAGTTGTCAT +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHALPGG*LGRSCH
Trigger: ATGACAACTTCGACCCAGCCAGCCTCCAGGGAGCGC...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000423665.6
ENST00000579562.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACATCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACTCATGGCCAAACAGGTaGGGCCTTGCAAGTCCCCGA +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHSWPNR*GLASPR
Trigger: TCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGA...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGAGACCCCAGTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: VDEQCRRPCRCEEYQRPQSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...CTGGGGTCTCTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACAGGCTCCAGGGACAGTTaGAGGGAGGAACATTGCCGT +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTGSRDS*REEHCR
Trigger: ACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCC...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACATCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: GSSHVINHGQTGEALQVPSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGGTCTCAGTGCAAAAGTaGCCTCCTTCAGCTGGATGT +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRVSVQK*PPSAGC
Trigger: ACATCCAGCTGAAGGAGGTCACTTTTGCACTGAGAC...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS-3UTR GCA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACAAAACAGGTGAGGCCTTaGAAGTCCCCGACAAAGGCG +
Preference number: 4 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTKQVRP*KSPTKA
Trigger: CGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTT...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACCAGTGTAGACGCCCCTaGAGGTGTGAAGAGTACCAG +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHQCRRP*RCEEYQ
Trigger: CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTG...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: VTSSIMAKQVRPCKSPTKSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGGGAGAAGCACCTTCATaGTCCTGTGTGGGCTTCTTT +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKGEAPS*SCVGFF
Trigger: AAAGAAGCCCACACAGGACCATGAAGGTGCTTCTCC...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS-3UTR TCA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTGTGACTGGTTCCAGGTaGCCGTCGTTTTTCTCGGTT +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFVTGSR*PSFFSV
Trigger: AACCGAGAAAAACGACGGGCACCTGGAACCAGTCAC...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTTCTCGAACAAGAGGCTaGGTCCAGCTCAGAACACAC +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFSRTRG*VQLRTH
Trigger: GTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGA...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR GCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCTCACAAAGTTTACCTaGATGAGCCAGCGAGTTGCC +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFLTKFT*MSQRVA
Trigger: GGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAG...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACTTGATGACTTCATCTTaGGCTGTGGCCACCCTCTCA +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHLMTSS*AVATLS
Trigger: TGAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAA...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR TCA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp AGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTGTAATCCAGATATTTaGGAGGCTGAGGCAGGAGAA +
Preference number: 4 (lower is better)
Translates to: RRVFILEQEAGSSSEHTLCNPDI*EAEAGE
Trigger: TTCTCCTGCCTCAGCCTCCCAAATATCTGGATTACA...AAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000616276.4
CDS-3UTR TCA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CCA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTTCCTCATCTGCAAAATaGAAGCAGTCACGTCATCAA +
Preference number: 4 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFSSSAK*KQSRHQ
Trigger: TTGATGACGTGACTGCTTCCATTTTGCAGATGAGGA...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR TCA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACTCCTCCCAGATGGAATaGATGGAAAGAATAAATCAG +
Preference number: 4 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHSSQME*MERINQ
Trigger: CTGATTTATTCTTTCCATTCATTCCATCTGGGAGGA...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS CCA 90 bp CTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCTaGGGGCGCGGACGGCAGCGGCTGAGTGGCTCCCCCTCGTCCGGG +
Preference number: 5 (lower is better)
Translates to: LGRRVGSGERRGHAA*GRGRQRLSGSPSSG
Trigger: CCCGGACGAGGGGGAGCCACTCAGCCGCTGCCGTCCGCGCCCCCAGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581423.1
CDS-3UTR CAA 90 bp CCGCCGCGGATCACGGCCAGGGCTGCCTTGGGCCCCGGGGCCGCCTTGACCCTCGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: PPRITARAALGPGAALTLAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GAGGGTCAAGGCGGCCCCGGGGCCCAAGGCAGCCCTGGCCGTGATCCGCGGCGG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CAA 90 bp GCCGCGGATCACGGCCAGGGCTGCCTTGGGCCCCGGGGCCGCCTTGACCCTCGTAGCCCAGCCCCCAGCTaGTCCGGGCCTCACCTGACT +
Preference number: 5 (lower is better)
Translates to: AADHGQGCLGPRGRLDPRSPAPS*SGPHLT
Trigger: AGTCAGGTGAGGCCCGGACAAGCTGGGGGCTGGGCT...ACGAGGGTCAAGGCGGCCCCGGGGCCCAAGGCAGCCCTGGCCGTGATCCGCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000578046.1
CDS CCA 90 bp CGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTaGGCACGCGGCCTGGGGGCGCGGACGGCAGCGGCTGAGTGGCTC +
Preference number: 5 (lower is better)
Translates to: RPAQTWPPSREWRTT*ARGLGARTAAAEWL
Trigger: GAGCCACTCAGCCGCTGCCGTCCGCGCCCCCAGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581423.1
CDS CCA 90 bp AGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGCGGCCTGGGGGCGCGGACGGCAGCG +
Preference number: 5 (lower is better)
Translates to: SRRSRPAQTWPPSRE*RTTWARGLGARTAA
Trigger: CGCTGCCGTCCGCGCCCCCAGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581423.1
CDS CCA 90 bp CACCAGCGTTGGCCCCTGTCAGCAGCACTCGCGCTCCCTGGAGGCTaGCTGGCCATAGCCGGGGTGGTCACTCTGGGCGGAGGACAGGAC +
Preference number: 5 (lower is better)
Translates to: HQRWPLSAALALPGG*LAIAGVVTLGGGQD
Trigger: GTCCTGTCCTCCGCCCAGAGTGACCACCCCGGCTATGGCCAGCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGGTG
70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577920.1
ENST00000578167.5
CDS CCA 90 bp CCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTaGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCTG +
Preference number: 5 (lower is better)
Translates to: PAPAAGSRRSRPAQT*PPSREWRTTWARGL
Trigger: CAGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGG
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000581423.1
CDS-3UTR CAA 90 bp GGAAACGCCACGGGTAGAAGACGCCGGCCGCGCGCGTGGCGCCGCCGCGGATCATTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GNATGRRRRPRAWRRRGSLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...TGATCCGCGGCGGCGCCACGCGCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCC
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS CCA 90 bp TCACCAACACCAGCGTTGGCCCCTGTCAGCAGCACTCGCGCTCCCTaGAGGCTGGCTGGCCATAGCCGGGGTGGTCACTCCGCTCAGGCC +
Preference number: 5 (lower is better)
Translates to: SPTPALAPVSSTRAP*RLAGHSRGGHSAQA
Trigger: GGCCTGAGCGGAGTGACCACCCCGGCTATGGCCAGCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342970.6
ENST00000411793.6
ENST00000577701.1
ENST00000581893.5
CDS CCA 90 bp TCACCAACACCAGCGTTGGCCCCTGTCAGCAGCACTCGCGCTCCCTaGAGGCTGGCTGGCCATAGCCGGGGTGGTCACTCTGGGCGGAGG +
Preference number: 5 (lower is better)
Translates to: SPTPALAPVSSTRAP*RLAGHSRGGHSGRR
Trigger: CCTCCGCCCAGAGTGACCACCCCGGCTATGGCCAGCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577920.1
ENST00000578167.5
CDS CCA 90 bp CGGGCGCCTCAGGGGAGGCCATGTCCGCCGCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGCAGTTCCCTACCACCTGGGTCGAAG +
Preference number: 5 (lower is better)
Translates to: RAPQGRPCPPRCRRP*GRPASGSSLPPGSK
Trigger: CTTCGACCCAGGTGGTAGGGAACTGCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCGCGGCGGACATGGCCTCCCCTGAGGCGCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000582346.5
CDS TCA 90 bp GGGCCCTTGGTCCCCCGCGCGGGCGCGGGTGGATCTCTCGGGCTCTaGCTTGTTTTCGGGTCACCTTCAGGCTTCAGCCAGGCACCTGAC +
Preference number: 5 (lower is better)
Translates to: GPLVPRAGAGGSLGL*LVFGSPSGFSQAPD
Trigger: GTCAGGTGCCTGGCTGAAGCCTGAAGGTGACCCGAAAACAAGTCAGAGCCCGAGAGATCCACCCGCGCCCGCGCGGGGGACCAAGGGCCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS GCA 90 bp CCCCAGCCCTGTGAGGAGAAGCACCTTCATGGTCCTGTGTGGGCCTaGAGAGGGACAGGGGACAGAGGTGGCCGGCACAGGCCCGCTCAG +
Preference number: 5 (lower is better)
Translates to: PQPCEEKHLHGPVWA*RGTGDRGGRHRPAQ
Trigger: CTGAGCGGGCCTGTGCCGGCCACCTCTGTCCCCTGTCCCTCTGCAGGCCCACACAGGACCATGAAGGTGCTTCTCCTCACAGGGCTGGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000578832.5
CDS CCA 90 bp CACCAGCGTTGGCCCCTGTCAGCAGCACTCGCGCTCCCTGGAGGCTaGCTGGCCATAGCCGGGGTGGTCACTCCGCTCAGGCCTCAGTTT +
Preference number: 5 (lower is better)
Translates to: HQRWPLSAALALPGG*LAIAGVVTPLRPQF
Trigger: AAACTGAGGCCTGAGCGGAGTGACCACCCCGGCTATGGCCAGCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGGTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342970.6
ENST00000411793.6
ENST00000577701.1
ENST00000581893.5
CDS CCA 90 bp CGGGCGCCTCAGGGGAGGCCATGTCCGCCGCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGCAGTTCCCTACCACCTTCTGCAGGA +
Preference number: 5 (lower is better)
Translates to: RAPQGRPCPPRCRRP*GRPASGSSLPPSAG
Trigger: TCCTGCAGAAGGTGGTAGGGAACTGCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCGCGGCGGACATGGCCTCCCCTGAGGCGCCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000577257.5
ENST00000577920.1
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TGCACGTCCAGCTCCCGCCGCAGGGAGCCGAAGAAGCCGTCCAGCGCAAACTTGGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: CTSSSRRREPKKPSSANLAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...CAAGTTTGCGCTGGACGGCTTCTTCGGCTCCCTGCGGCGGGAGCTGGACGTGCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579562.5
CDS GCA 90 bp CCCCAGCCCTGTGAGGAGAAGCACCTTCATGGTCCTGTGTGGGCCTaGAGAGGGACAGGGGACAGAGGTGGCCGGCACAGGCATGCCTGT +
Preference number: 5 (lower is better)
Translates to: PQPCEEKHLHGPVWA*RGTGDRGGRHRHAC
Trigger: ACAGGCATGCCTGTGCCGGCCACCTCTGTCCCCTGTCCCTCTGCAGGCCCACACAGGACCATGAAGGTGCTTCTCCTCACAGGGCTGGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000581773.5
ENST00000616276.4
CDS CCA 90 bp CCAGACGCGCGTAGTGATAGGCCAGCTCCTCACCAACACCAGCGTTaGCCCCTGTCAGCAGCACTCGCGCTCCCTGGAGGCTGGGTCGAA +
Preference number: 5 (lower is better)
Translates to: PDARSDRPAPHQHQR*PLSAALALPGGWVE
Trigger: TTCGACCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGAGGAGCTGGCCTATCACTACGCGCGTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000584904.5
CDS-3UTR CAA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGAAGACGCCGGCCGCGCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: AGASTAGGNATGRRRRPRLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GCGCGGCCGGCGTCTTCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CAA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAATCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACTCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS GCA 90 bp CCAGGTGCAAACAGCGCCGTGCTGACTACATTTCCCAGACAGCCTTaGGGCGGCCCGGGCCTTAAAGCGTCCATTTCCCAGCGGCCCTCC +
Preference number: 5 (lower is better)
Translates to: PGANSAVLTTFPRQP*GGPGLKASISQRPS
Trigger: GGAGGGCCGCTGGGAAATGGACGCTTTAAGGCCCGGGCCGCCGCAAGGCTGTCTGGGAAATGTAGTCAGCACGGCGCTGTTTGCACCTGG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577257.5
CDS CCA 90 bp CGTGACAACCGCCTTGTAGGCACACTCTTCTTAAATCCGGGCCCTTaGTCCCCCGCGCGGGCGCGGGTGGATCTCTCGGGCTCTGACTTG +
Preference number: 5 (lower is better)
Translates to: RDNRLVGTLFLNPGP*SPARARVDLSGSDL
Trigger: CAAGTCAGAGCCCGAGAGATCCACCCGCGCCCGCGCGGGGGACCAAGGGCCCGGATTTAAGAAGAGTGTGCCTACAAGGCGGTTGTCACG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS-3UTR CAA 90 bp GGCGCGGTAGCCAGCGCCGGAGCAAGCACAGCAGGCGGAAACGCCACGGGTAGACTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: GAVASAGASTAGGNATGRLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...TCTACCCGTGGCGTTTCCGCCTGCTGTGCTTGCTCCGGCGCTGGCTACCGCGCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000578046.1
ENST00000579562.5
CDS-3UTR CAA 90 bp AGAAGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGTCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: RSRPAQTWPPSREWRTTWSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...CCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCTTCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000582346.5
CDS TCA 90 bp GGCAGTTCCCTACCACCTTCTGCAGGAGAGCCTCAGTGTGGGCAGTaGGCACCAGGTGGGAGCCCAGACGCGCGTAGTGATAGGCCAGCT +
Preference number: 5 (lower is better)
Translates to: GSSLPPSAGEPQCGQ*APGGSPDARSDRPA
Trigger: AGCTGGCCTATCACTACGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGTGGTAGGGAACTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000577257.5
ENST00000577920.1
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS TCA 90 bp ACATTTCCCAGGAGGCTCCGCGGCCAGGTGCAAACAGCGCCGTGCTaGCTACATTTCCCAGACAGCCTTGCGGCGGCCCGGGCCTTAAAG +
Preference number: 5 (lower is better)
Translates to: TFPRRLRGQVQTAPC*LHFPDSLAAARALK
Trigger: CTTTAAGGCCCGGGCCGCCGCAAGGCTGTCTGGGAAATGTAGTCAGCACGGCGCTGTTTGCACCTGGCCGCGGAGCCTCCTGGGAAATGT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000577257.5
CDS-3UTR CAA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: VRPCKSPTKAPNTGHLHLLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LPLRPCHQVDEQCRRPCRSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...CCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTGGAGAACGACGTGGGCATCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: SRPAQTWPPSREWRTTWASPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...TGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000579562.5
ENST00000584904.5
CDS-3UTR CAA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGTCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS TCA 90 bp GCTCTGACTTGTTTTCGGGTCACCTTCAGGCTTCAGCCAGGCACCTaGCGCCTCTTTCCCCTCACGGTGCCAGGGCCGGGCCGAACTACA +
Preference number: 5 (lower is better)
Translates to: ALTCFRVTFRLQPGT*RLFPLTVPGPGRTT
Trigger: TGTAGTTCGGCCCGGCCCTGGCACCGTGAGGGGAAAGAGGCGTCAGGTGCCTGGCTGAAGCCTGAAGGTGACCCGAAAACAAGTCAGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577257.5
CDS TCA 90 bp GTGAGGGGGCCGCAGCGCTCGAACAATCCCGCCCTCTCGTTGCCGTaGCAACCGCCTTGTAGGCACACTCTTCTTAAATCCGGGCCCTTG +
Preference number: 5 (lower is better)
Translates to: VRGPQRSNNPALSLP*QPPCRHTLLKSGPL
Trigger: CAAGGGCCCGGATTTAAGAAGAGTGTGCCTACAAGGCGGTTGTCACGGCAACGAGAGGGCGGGATTGTTCGAGCGCTGCGGCCCCCTCAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS-3UTR CAA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCTCCCAACAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: GLASPRQRRLTRGTCTSQQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...TTGGGAGGTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTGCACCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: QVRPCKSPTKAPNTGHLHQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...GTGCAGGTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GCTCACAAAGTTTACCTGCATGAGCCAGCGAGTTGCCTGGGGGCTGCGGGCTCGTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: AHKVYLHEPASCLGAAGSSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...CGAGCCCGCAGCCCCCAGGCAACTCGCTGGCTCATGCAGGTAAACTTTGTGAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000578832.5
ENST00000579562.5
ENST00000584904.5
CDS-3UTR CAA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACTCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGGCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 5 (lower is better)
Translates to: SGSRDSWREEHCRLGLEGRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...CCCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: VINHGQTGEALQVPDKGAAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TTCTGGCTCCAGGGACAGTTGGAGGGAGGAACATTGCCGTCTGGGACTGGAGGGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: FWLQGQLEGGTLPSGTGGLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAACTGTCCCTGGAGCCAGAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 10 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000578046.1
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: LLPLRPCHQVDEQCRRPCLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCCTCCTCCCGCTCAGACCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: LLLPLRPCHQVDEQCRRPLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGGTCTGAGCGGGAGGAGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000581521.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGCACCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: AKQVRPCKSPTKAPNTGHLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GTGCCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp ATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTAACACGGGGGTAGTGTGCCGAGATTaGCCATTGCACTCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: MAKQVRPCKSPTKAPNTGVVCRD*PLHSSP
Trigger: CGGGCTGGAGTGCAATGGCAAATCTCGGCACACTAC...CCCCGTGTTAGGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000581521.5
ENST00000581773.5
CDS-3UTR CAA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: VINHGQTGEALQVPDKGALEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 11 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCAGTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: CHQVDEQCRRPCRCEEYQSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...CTGGTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000579562.5
ENST00000581521.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTTAAATCCGGGCCCTaGGTCCCCCGCGCGGGCGCG +
Preference number: 5 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLLKSGP*VPRAGA
Trigger: CGCGCCCGCGCGGGGGACCAAGGGCCCGGATTTAAG...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR CAA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: GSSHVINHGQTGEALQVPLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: GSSHVINHGQTGEALQVPSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACCTCTCGGGCTCTGACTaGTTTTCGGGTCACCTTCAG +
Preference number: 5 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYLSGSD*FSGHLQ
Trigger: CTGAAGGTGACCCGAAAACAAGTCAGAGCCCGAGAG...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000577917.5
CDS-3UTR CAA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCGTAGTGTGCCGAGATTaGCCATTGCACTCCAGCCCG +
Preference number: 5 (lower is better)
Translates to: VINHGQTGEALQVPDKGAVVCRD*PLHSSP
Trigger: CGGGCTGGAGTGCAATGGCAAATCTCGGCACACTAC...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000581521.5
ENST00000581773.5
CDS CCA 90 bp CAGGGCCCCCAGCCCTGTGAGGAGAAGCACCTTCATGGTCCTGTGTaGGCTTCTTTCAAGTCTCAGTGCAAAAGTGACCTCCTTCAGCTG +
Preference number: 5 (lower is better)
Translates to: QGPQPCEEKHLHGPV*ASFKSQCKSDLLQL
Trigger: CAGCTGAAGGAGGTCACTTTTGCACTGAGACTTGAAAGAAGCCCACACAGGACCATGAAGGTGCTTCTCCTCACAGGGCTGGGGGCCCTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS-3UTR CAA 90 bp GTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACAAAGGCGCCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: VINHGQTGEALQVPDKGALDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GGCGCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCGACACAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: AVTSSIMAKQVRPCKSPTQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...TGTCGGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCCCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: GSSHVINHGQTGEALQVPQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...GGGGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CCCTGCCACCAGGTAGACGAACAGTGTAGACGCCCCTGCAGGTGTGAAGAGTACAGGCGGGCAAATCACTaGAGATCAGGAGTTCGAGAC +
Preference number: 5 (lower is better)
Translates to: PCHQVDEQCRRPCRCEEYRRANH*RSGVRD
Trigger: GTCTCGAACTCCTGATCTCAAGTGATTTGCCCGCCT...GTACTCTTCACACCTGCAGGGGCGTCTACACTGTTCGTCTACCTGGTGGCAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS-3UTR CAA 90 bp ATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCTCCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 5 (lower is better)
Translates to: ILEQEAGSSSEHTLSLLLRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...GAGGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 5 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp ATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTCCCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: MEAVTSSIMAKQVRPCKSQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...GGACTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTGCCGCGGCCGTGACGTaGAGCTCCTGGCGGATAAAC +
Preference number: 5 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFAAAVT*SSWRIN
Trigger: GTTTATCCGCCAGGAGCTCAACGTCACGGCCGCGGC...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCCTTGCAAGTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: KMEAVTSSIMAKQVRPCKLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...CTTGCAAGGCCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: VFILEQEAGSSSEHTLSLLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...GAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp TTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCTCCCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: LFSNKRLGPAQNTLFPSSLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GGAGGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: EFLFSNKRLGPAQNTLFPSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...GGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTTCCAGCCCGCCCAGCTaGTCCAGCGCAAACTGCACC +
Preference number: 5 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFSSPPS*SSANCT
Trigger: GGTGCAGTTTGCGCTGGACAAGCTGGGCGGGCTGGA...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000616276.4
CDS-3UTR CAA 90 bp TTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCCCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: FLFSNKRLGPAQNTLFPSQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...GGAGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTTTGGAGGGAGGAACATaGCCGTCTGGGACTGGAGGG +
Preference number: 5 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTLEGGT*PSGTGG
Trigger: CCCTCCAGTCCCAGACGGCAATGTTCCTCCCTCCAA...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp CTCATCTGCAAAATGGAAGCAGTCACGTCATCAATCATGGCCAAACAGGTGAGGCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: LICKMEAVTSSIMAKQVRLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...CCTCACCTGTTTGGCCATGATTGATGACGTGACTGCTTCCATTTTGCAGATGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000579562.5
ENST00000581521.5
ENST00000581773.5
ENST00000581893.5
ENST00000583928.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTTCACCAACACCAGCGTaGGCCCCTGTCAGCAGCACT +
Preference number: 5 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFSPTPA*APVSST
Trigger: AGTGCTGCTGACAGGGGCCAACGCTGGTGTTGGTGA...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 5 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTT +
Preference number: 5 (lower is better)
Translates to: REEEFLFSNKRLGPAQNTRPRRQ*HVAHKV
Trigger: AACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCG...TGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCCCTCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: SFYSRTRGWVQLRTHSFPLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...AGGGAAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp GAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTTCAAACAGGTGAGGCCTaGCAAGTCCCCGACAAAGGC +
Preference number: 5 (lower is better)
Translates to: EEFLFSNKRLGPAQNTLFQTGEA*QVPDKG
Trigger: GCCTTTGTCGGGGACTTGCAAGGCCTCACCTGTTTG...AAAGAGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACACTCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: RRRVFILEQEAGSSSEHTLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...AGTGTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS-3UTR CAA 90 bp AAGAGAAGAAGAGTTTTTATTCTCGAACAAGAGGCTGGGTCCAGCTCAGAACACCTTGATGACTTCATCTaGGGCTGTGGCCACCCTCTC +
Preference number: 5 (lower is better)
Translates to: KRRRVFILEQEAGSSSEHLDDFI*GCGHPL
Trigger: GAGAGGGTGGCCACAGCCCAAGATGAAGTCATCAAG...GTGTTCTGAGCTGGACCCAGCCTCTTGTTCGAGAATAAAAACTCTTCTTCTCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 9 transcripts:
ENST00000301382.8
ENST00000339423.7
ENST00000342970.6
ENST00000411793.6
ENST00000423665.6
ENST00000577917.5
ENST00000579562.5
ENST00000581893.5
ENST00000616276.4
CDS GCA 72 bp TCGGGGACCCAGCGCCGGAGCGTCGCCGGGCAACAGTaGCCGCCTGGTCTTCGCCTCCCAGCAGGGGCCCGG +
Preference number: 6 (lower is better)
Translates to: SGTQRRSVAGQQ*PPGLRLPAGAR
Trigger: CCGGGCCCCTGCTGGGAGGCGAAGACCAGGCGGGCACTGTTGCCCGGCGACGCTCCGGCGCTGGGTCCCCGA
78% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000577257.5
ENST00000577917.5
ENST00000581893.5
ENST00000582346.5
CDS CCA 72 bp CGAGTAGGGAGTGGAGAACGACGTGGGCACGCGGCCTaGGGGCGCGGACGGCAGCGGCTGAGTGGCTCCCCC +
Preference number: 6 (lower is better)
Translates to: RVGSGERRGHAA*GRGRQRLSGSP
Trigger: GGGGGAGCCACTCAGCCGCTGCCGTCCGCGCCCCCAGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581423.1
CDS CCA 72 bp AGCCGTCCAGCGCAAACTTGGCCGCCGAGTAGGGAGTaGAGAACGACGTGGGCACGCGGCCTGGGGGCGCGG +
Preference number: 6 (lower is better)
Translates to: SRPAQTWPPSRE*RTTWARGLGAR
Trigger: CCGCGCCCCCAGGCCGCGTGCCCACGTCGTTCTCCACTCCCTACTCGGCGGCCAAGTTTGCGCTGGACGGCT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000581423.1
CDS CCA 72 bp CCAGCGTTGGCCCCTGTCAGCAGCACTCGCGCTCCCTaGAGGCTGGCTGGCCATAGCCGGGGTGGTCACTCC +
Preference number: 6 (lower is better)
Translates to: PALAPVSSTRAP*RLAGHSRGGHS
Trigger: GGAGTGACCACCCCGGCTATGGCCAGCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000342970.6
ENST00000411793.6
ENST00000577701.1
ENST00000581893.5
CDS CCA 72 bp CCAGCGTTGGCCCCTGTCAGCAGCACTCGCGCTCCCTaGAGGCTGGCTGGCCATAGCCGGGGTGGTCACTCT +
Preference number: 6 (lower is better)
Translates to: PALAPVSSTRAP*RLAGHSRGGHS
Trigger: AGAGTGACCACCCCGGCTATGGCCAGCCAGCCTCCAGGGAGCGCGAGTGCTGCTGACAGGGGCCAACGCTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577920.1
ENST00000578167.5
CDS CCA 72 bp GTGAGCCACCGTGCCTTCTGCAGGAGAGCCTCAGTGTaGGCAGTGAGCACCAGGTGGGAGCCCAGACGCGCG +
Preference number: 6 (lower is better)
Translates to: VSHRAFCRRASV*AVSTRWEPRRA
Trigger: CGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGCACGGTGGCTCAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422535.6
ENST00000577701.1
CDS CAA 72 bp CCGCCTTGTAGGCACACTCTTCTTAAATCCGGGCCCTaGGTCCCCCGCGCGGGCGCGGGTGGATCTCTCGGG +
Preference number: 6 (lower is better)
Translates to: PPCRHTLLKSGP*VPRAGAGGSLG
Trigger: CCCGAGAGATCCACCCGCGCCCGCGCGGGGGACCAAGGGCCCGGATTTAAGAAGAGTGTGCCTACAAGGCGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS CAA 90 bp CCTTGGTCCCCCGCGCGGGCGCGGGTGGATCTCTCGGGCTCTGACTaGTTTTCGGGTCACCTTCAGGCTTCAGCCAGGCACCTGACGCCT +
Preference number: 6 (lower is better)
Translates to: PWSPARARVDLSGSD*FSGHLQASARHLTP
Trigger: AGGCGTCAGGTGCCTGGCTGAAGCCTGAAGGTGACCCGAAAACAAGTCAGAGCCCGAGAGATCCACCCGCGCCCGCGCGGGGGACCAAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS TCA 72 bp GTCCCCCGCGCGGGCGCGGGTGGATCTCTCGGGCTCTaGCTTGTTTTCGGGTCACCTTCAGGCTTCAGCCAG +
Preference number: 6 (lower is better)
Translates to: VPRAGAGGSLGL*LVFGSPSGFSQ
Trigger: CTGGCTGAAGCCTGAAGGTGACCCGAAAACAAGTCAGAGCCCGAGAGATCCACCCGCGCCCGCGCGGGGGAC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS CCA 72 bp CAGGGGAGGCCATGTCCGCCGCGATGTAGAAGACCTTaGGGGCGCCCAGCTTCCGGCAGTTCCCTACCACCT +
Preference number: 6 (lower is better)
Translates to: QGRPCPPRCRRP*GRPASGSSLPP
Trigger: AGGTGGTAGGGAACTGCCGGAAGCTGGGCGCCCCCAAGGTCTTCTACATCGCGGCGGACATGGCCTCCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 9 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000577257.5
ENST00000577920.1
ENST00000581521.5
ENST00000581773.5
ENST00000582346.5
ENST00000616276.4
CDS CAA 72 bp CCCGCGCGGGCGCGGGTGGATCTCTCGGGCTCTGACTaGTTTTCGGGTCACCTTCAGGCTTCAGCCAGGCAC +
Preference number: 6 (lower is better)
Translates to: PARARVDLSGSD*FSGHLQASARH
Trigger: GTGCCTGGCTGAAGCCTGAAGGTGACCCGAAAACAAGTCAGAGCCCGAGAGATCCACCCGCGCCCGCGCGGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS TCA 72 bp TGTTTTCGGGTCACCTTCAGGCTTCAGCCAGGCACCTaGCGCCTCTTTCCCCTCACGGTGCCAGGGCCGGGC +
Preference number: 6 (lower is better)
Translates to: CFRVTFRLQPGT*RLFPLTVPGPG
Trigger: GCCCGGCCCTGGCACCGTGAGGGGAAAGAGGCGTCAGGTGCCTGGCTGAAGCCTGAAGGTGACCCGAAAACA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS TCA 72 bp ACCGTGCCTTCTGCAGGAGAGCCTCAGTGTGGGCAGTaGGCACCAGGTGGGAGCCCAGACGCGCGTAGTGAT +
Preference number: 6 (lower is better)
Translates to: TVPSAGEPQCGQ*APGGSPDARSD
Trigger: ATCACTACGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGCACGGT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000422535.6
ENST00000577701.1
CDS TCA 72 bp CTACCACCTTCTGCAGGAGAGCCTCAGTGTGGGCAGTaGGCACCAGGTGGGAGCCCAGACGCGCGTAGTGAT +
Preference number: 6 (lower is better)
Translates to: LPPSAGEPQCGQ*APGGSPDARSD
Trigger: ATCACTACGCGCGTCTGGGCTCCCACCTGGTGCTCACTGCCCACACTGAGGCTCTCCTGCAGAAGGTGGTAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENST00000339423.7
ENST00000342970.6
ENST00000423665.6
ENST00000577257.5
ENST00000577920.1
ENST00000581521.5
ENST00000581773.5
ENST00000616276.4
CDS GCA 72 bp GGGGGCCGCAGCGCTCGAACAATCCCGCCCTCTCGTTaGCGTGACAACCGCCTTGTAGGCACACTCTTCTTA +
Preference number: 6 (lower is better)
Translates to: GGRSARTIPPSR*RDNRLVGTLFL
Trigger: TAAGAAGAGTGTGCCTACAAGGCGGTTGTCACGGCAACGAGAGGGCGGGATTGTTCGAGCGCTGCGGCCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS CAA 72 bp GCTGTCCGTCAGGCTGGGCAGCGCCCGCGACGTCAGTaGCACGTAGCTCACAAAGTTTACCTGGGTCGAAGT +
Preference number: 6 (lower is better)
Translates to: AVRQAGQRPRRQ*HVAHKVYLGRS
Trigger: ACTTCGACCCAGGTAAACTTTGTGAGCTACGTGCAACTGACGTCGCGGGCGCTGCCCAGCCTGACGGACAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000579559.1
CDS TCA 72 bp CCGCAGCGCTCGAACAATCCCGCCCTCTCGTTGCCGTaGCAACCGCCTTGTAGGCACACTCTTCTTAAATCC +
Preference number: 6 (lower is better)
Translates to: PQRSNNPALSLP*QPPCRHTLLKS
Trigger: GGATTTAAGAAGAGTGTGCCTACAAGGCGGTTGTCACGGCAACGAGAGGGCGGGATTGTTCGAGCGCTGCGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000577257.5
ENST00000577917.5
CDS CCA 72 bp CAGCCCTGTGAGGAGAAGCACCTTCATGGTCCTGTGTaGGCTTCTTTCAAGTCTCAGTGCAAAAGTGACCTC +
Preference number: 6 (lower is better)
Translates to: QPCEEKHLHGPV*ASFKSQCKSDL
Trigger: GAGGTCACTTTTGCACTGAGACTTGAAAGAAGCCCACACAGGACCATGAAGGTGCTTCTCCTCACAGGGCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581521.5
CDS GCA 72 bp CTTCATGGTCCTGTGTGGGCTTCTTTCAAGTCTCAGTaGAAAAGTGACCTCCTTCAGCTGGATGTGGTGGCT +
Preference number: 6 (lower is better)
Translates to: LHGPVWASFKSQ*KSDLLQLDVVA
Trigger: AGCCACCACATCCAGCTGAAGGAGGTCACTTTTGCACTGAGACTTGAAAGAAGCCCACACAGGACCATGAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000581521.5