Pregenerated sensors for HSBP1L1 (Homo sapiens)
Ensembl gene IDs: ENSG00000226742Ensembl transcript IDs: ENST00000451882.3, ENST00000587347.1, ENST00000589516.1, ENST00000590571.1, ENST00000592352.1
Found 56 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTaGTTTCTGGGGAGGGCTCTCCTTGGCTTGCCGATGGCCTCCTTC | + |
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Preference number: 1 (lower is better) Translates to: TVLFSGSPRSRCWSV*FLGRALLGLPMASF Trigger: GAAGGAGGCCATCGGCAAGCCAAGGAGAGCCCTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR CCA 90 bp | TCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTGGGGAGGATGGCCTCCTTCTCTaGTGCAGGCACGGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: SVFWKSQIKVLVRVISGEDGLLL*CRHGGE Trigger: CTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATC...CTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR TCA 90 bp | TTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTGGGGAAGGTGCTGGTCCGTGTaGTTTCTGGGGAGGGCTCTC | + |
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Preference number: 2 (lower is better) Translates to: FCFLEVPDQGAGPCDFWGRCWSV*FLGRAL Trigger: GAGAGCCCTCCCCAGAAATCACACGGACCAGCACCT...TCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR CCA 90 bp | CACCCTCAGGACCGATGTAACCTTAATGACTTCTGTAGAGGCCCCATCTCCAAATCCTTGGCTTGCCGATaGCCTCCTTCTCTGGTGCAG | + |
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Preference number: 2 (lower is better) Translates to: HPQDRCNLNDFCRGPISKSLACR*PPSLVQ Trigger: CTGCACCAGAGAAGGAGGCCATCGGCAAGCCAAGGA...TTTGGAGATGGGGCCTCTACAGAAGTCATTAAGGTTACATCGGTCCTGAGGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR CCA 90 bp | AGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGATGGCCTCCTTCTCTaGTGCAGGCACGGAGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: RNLSFHSSVFWKSQIKVLDGLLL*CRHGGE Trigger: CTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATC...CAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR GCA 90 bp | CAGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTAGCAGGCGAGCCCCTTaGGTCTCTTCTCAGAAAGAC | + |
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Preference number: 2 (lower is better) Translates to: QKLVFSQFCFLEVPDQGASRRAP*VSSQKD Trigger: GTCTTTCTGAGAAGAGACGCAAGGGGCTCGCCTGCT...AGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR CCA 90 bp | TTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTGGGGACACAGTTCTGTTTTCTaGAAGTCCCAGATCAAGGTG | + |
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Preference number: 2 (lower is better) Translates to: FCFLEVPDQGAGPCDFWGHSSVF*KSQIKV Trigger: CACCTTGATCTGGGACTTCCAGAAAACAGAACTGTG...TCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR GCA 90 bp | TTAAACAACAGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCGCCTCCCATGGCACATaGAACTACTACTACCAGACA | + |
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Preference number: 2 (lower is better) Translates to: LNNRNLSFHSSVFWKSQIASHGT*NYYYQT Trigger: TGTCTGGTAGTAGTAGTTGCATGTGCCATGGGAGGC...GATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCTGTTGTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| 3UTR CAA 90 bp | TGTTCTTTAATAGAATTTTCAATGCCAGCTTGCACCATTAAGTCCTaGACATTCTTCTGTAAGTCCTCAATGCGATTTCCCATTTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: CSLIEFSMPACTIKS*TFFCKSSMRFPISS Trigger: GGAAGAAATGGGAAATCGCATTGAGGACTTACAGAAGAATGTCAAGGACTTAATGGTGCAAGCTGGCATTGAAAATTCTATTAAAGAACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| 3UTR GCA 72 bp | GGCTCTCCTTGGCTTGCCGATGGCCTCCTTCTCTGGTaGAGGCACGGAGGGGAGAGCAGGCGAGCCCCTTGC | + |
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Preference number: 3 (lower is better) Translates to: GSPWLADGLLLW*RHGGESRRAPC Trigger: GCAAGGGGCTCGCCTGCTCTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATCGGCAAGCCAAGGAGAGCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR CCA 72 bp | TGTGATTTCTGGGGAGGGCTCTCCTTGGCTTGCCGATaGCCTCCTTCTCTGGTGCAGGCACGGAGGGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: CDFWGGLSLACR*PPSLVQARRGE Trigger: CTCTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATCGGCAAGCCAAGGAGAGCCCTCCCCAGAAATCACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR-3UTR CAA 90 bp | TCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTGGGGAGGGCTCTCCTaGGCTTGCCGATGGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: SQFCFLEVPDQGAGPCDFWGGLS*ACRWPP Trigger: AGGAGGCCATCGGCAAGCCAAGGAGAGCCCTCCCCA...GAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR TCA 72 bp | TTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTaGTTTCTGGGGAGGGCTCTCCTTGGCTTGCCGATG | + |
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Preference number: 3 (lower is better) Translates to: FSGSPRSRCWSV*FLGRALLGLPM Trigger: CATCGGCAAGCCAAGGAGAGCCCTCCCCAGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR GCA 72 bp | ATTTCCCATTTCTTCCAGTACAGTGTTAAGGCGCTCTaGGTAGAGCTGGAGTCCAGAGCCGCCGAGGCACAG | + |
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Preference number: 3 (lower is better) Translates to: ISHFFQYSVKAL*VELESRAAEAQ Trigger: CTGTGCCTCGGCGGCTCTGGACTCCAGCTCTACGCAGAGCGCCTTAACACTGTACTGGAAGAAATGGGAAAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| 3UTR-3UTR CAA 90 bp | ACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCTGGGGAGGGCTCTCCTaGGCTTGCCGATGGCCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TCLFTVLFSGSPRSRCWSWGGLS*ACRWPP Trigger: AGGAGGCCATCGGCAAGCCAAGGAGAGCCCTCCCCA...GGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| 3UTR CCA 72 bp | GCCCAGGACTGCCATAACAAAATACTTCAGATTGGGTaGTTTAAACAACAGAAACTTGTCTTTTCACAGTTC | + |
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Preference number: 3 (lower is better) Translates to: AQDCHNKILQIG*FKQQKLVFSQF Trigger: GAACTGTGAAAAGACAAGTTTCTGTTGTTTAAACCACCCAATCTGAAGTATTTTGTTATGGCAGTCCTGGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451882.3 |
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| CDS-3UTR CCA 90 bp | TGGCTTGCCGATGGCCTCCTTCTCTGGTGCAGGCACGGAGGGGAGAGCAGGCGAGTCCATGTGGACCGCTaGCCGGGGGCGTCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: WLADGLLLWCRHGGESRRVHVDR*PGASVG Trigger: CCCCACTGACGCCCCCGGCCAGCGGTCCACATGGAC...TCGCCTGCTCTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATCGGCAAGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | CCTCCTTCTCTGGTGCAGGCACGGAGGGGAGAGCAGGCGAGCCCCTTGCGTCTCGATGGCCTCCTTCTCTaGTGCAGGCACGGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PPSLVQARRGEQASPLRLDGLLL*CRHGGE Trigger: CTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATC...GAGACGCAAGGGGCTCGCCTGCTCTCCCCTCCGTGCCTGCACCAGAGAAGGAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | CACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTGTCCATGTGGACCGCTaGCCGGGGGCGTCAGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: HSSVFWKSQIKVLVRVISVHVDR*PGASVG Trigger: CCCCACTGACGCCCCCGGCCAGCGGTCCACATGGAC...AGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | ACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGGACCCGGCGCGAGGTaGCGACAGCTAAGCTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: TCLFTVLFSGSPRSRCWSGPGAR*RQLSSA Trigger: CGCGGAGCTTAGCTGTCGCCACCTCGCGCCGGGTCC...GGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | CAGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTCCCCGCACGTCCATGTaGACCGCTGGCCGGGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: QKLVFSQFCFLEVPDQGAPRTSM*TAGRGR Trigger: ACGCCCCCGGCCAGCGGTCCACATGGACGTGCGGGG...AGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | AAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTGGACCCGGCGCGAGGTaGCGACAGCTAAGCTCCGCG | + |
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Preference number: 4 (lower is better) Translates to: KLVFSQFCFLEVPDQGAGGPGAR*RQLSSA Trigger: CGCGGAGCTTAGCTGTCGCCACCTCGCGCCGGGTCC...ACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR TCA 90 bp | TCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCAGGTGCTGGTCCGTGTaGTTTCTGGGGAGGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: SQFCFLEVPDQGAGPCDFRCWSV*FLGRAL Trigger: GAGAGCCCTCCCCAGAAATCACACGGACCAGCACCT...GAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | CAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTGGTCCTTGGCTTGCCGATaGCCTCCTTCTCTGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: QFCFLEVPDQGAGPCDFWSLACR*PPSLVQ Trigger: CTGCACCAGAGAAGGAGGCCATCGGCAAGCCAAGGA...CCAGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | TTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCCTTGGCTTGCCGATaGCCTCCTTCTCTGGTGCAG | + |
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Preference number: 4 (lower is better) Translates to: FHSSVFWKSQIKVLVRVISLACR*PPSLVQ Trigger: CTGCACCAGAGAAGGAGGCCATCGGCAAGCCAAGGA...AATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR GCA 90 bp | AACCTTAATGACTTCTGTAGAGGCCCCATCTCCAAATACAGACATGCTGCAGTTAGTGTTAAGGCGCTCTaGGTAGAGCTGGAGTCCAGA | + |
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Preference number: 4 (lower is better) Translates to: NLNDFCRGPISKYRHAAVSVKAL*VELESR Trigger: TCTGGACTCCAGCTCTACGCAGAGCGCCTTAACACT...AACTGCAGCATGTCTGTATTTGGAGATGGGGCCTCTACAGAAGTCATTAAGGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| CDS-3UTR TCA 90 bp | TGGTTTAAACAACAGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAAGGTGCTGGTCCGTGTaGTTTCTGGGGAGGGCTCTC | + |
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Preference number: 4 (lower is better) Translates to: WFKQQKLVFSQFCFLEVPRCWSV*FLGRAL Trigger: GAGAGCCCTCCCCAGAAATCACACGGACCAGCACCT...TGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCTGTTGTTTAAACCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | ACAACAAAAAGATACTCCATGATAATCTACCAGTCCGAAAGAATCACAGCATTTGATGGCCTCCTTCTCTaGTGCAGGCACGGAGGGGAG | + |
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Preference number: 4 (lower is better) Translates to: TTKRYSMIIYQSERITAFDGLLL*CRHGGE Trigger: CTCCCCTCCGTGCCTGCACCAGAGAAGGAGGCCATC...AAATGCTGTGATTCTTTCGGACTGGTAGATTATCATGGAGTATCTTTTTGTTGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| CDS-3UTR CCA 90 bp | CACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTCACAGTTCTGTTTTCTaGAAGTCCCAGATCAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: HSSVFWKSQIKVLVRVISHSSVF*KSQIKV Trigger: CACCTTGATCTGGGACTTCCAGAAAACAGAACTGTG...AGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR TCA 90 bp | CCTCAGGACCGATGTAACCTTAATGACTTCTGTAGAGGCCCCATCTCCAAATACCCATTTCTTCCATTCTaGGGTTTAATGTTGCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: PQDRCNLNDFCRGPISKYPFLPF*GLMLPS Trigger: TGACGGCAACATTAAACCTCAGAATGGAAGAAATGG...GTATTTGGAGATGGGGCCTCTACAGAAGTCATTAAGGTTACATCGGTCCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000451882.3 |
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| CDS-3UTR CCA 90 bp | ACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCCACAGTTCTGTTTTCTaGAAGTCCCAGATCAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: TCLFTVLFSGSPRSRCWSHSSVF*KSQIKV Trigger: CACCTTGATCTGGGACTTCCAGAAAACAGAACTGTG...GGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR GCA 90 bp | CCTCAGGACCGATGTAACCTTAATGACTTCTGTAGAGGCCCCATCTCCAAATACTCTGTAAGTCCTCAATaGGATTTCCCATTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: PQDRCNLNDFCRGPISKYSVSPQ*DFPFLP Trigger: TGGAAGAAATGGGAAATCGCATTGAGGACTTACAGA...GTATTTGGAGATGGGGCCTCTACAGAAGTCATTAAGGTTACATCGGTCCTGAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR GCA 90 bp | CACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGGTCCGTGTGATTTCTTCTGTAAGTCCTCAATaGGATTTCCCATTTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: HSSVFWKSQIKVLVRVISSVSPQ*DFPFLP Trigger: TGGAAGAAATGGGAAATCGCATTGAGGACTTACAGA...AGAAATCACACGGACCAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR GCA 90 bp | TGGTTTAAACAACAGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAAGCAGGCGAGCCCCTTaGGTCTCTTCTCAGAAAGAC | + |
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Preference number: 4 (lower is better) Translates to: WFKQQKLVFSQFCFLEVPSRRAP*VSSQKD Trigger: GTCTTTCTGAGAAGAGACGCAAGGGGCTCGCCTGCT...TGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCTGTTGTTTAAACCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR GCA 90 bp | TACTACTACCAGACAACAAAAAGATACTCCATGATAATCTACCAGTCCGAAAGAGCCTCCCATGGCACATaGAACTACTACTACCAGACA | + |
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Preference number: 4 (lower is better) Translates to: YYYQTTKRYSMIIYQSERASHGT*NYYYQT Trigger: TGTCTGGTAGTAGTAGTTGCATGTGCCATGGGAGGC...TCTTTCGGACTGGTAGATTATCATGGAGTATCTTTTTGTTGTCTGGTAGTAGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| CDS-3UTR TCA 90 bp | AGAAACTTGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAGATCAAGGTGCTGAGAAAAGGATATTTCTaGGGTTTAATGTTGCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: RNLSFHSSVFWKSQIKVLRKGYF*GLMLPS Trigger: TGACGGCAACATTAAACCTCAGAAATATCCTTTTCT...CAGCACCTTGATCTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| 3UTR CAA 72 bp | AGTCTGCCCAGGACTGCCATAACAAAATACTTCAGATaGGGTGGTTTAAACAACAGAAACTTGTCTTTTCAC | + |
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Preference number: 4 (lower is better) Translates to: SLPRTAITKYFR*GGLNNRNLSFH Trigger: GTGAAAAGACAAGTTTCTGTTGTTTAAACCACCCAATCTGAAGTATTTTGTTATGGCAGTCCTGGGCAGACT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451882.3 |
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| 3UTR CAA 72 bp | ATAGAATTTTCAATGCCAGCTTGCACCATTAAGTCCTaGACATTCTTCTGTAAGTCCTCAATGCGATTTCCC | + |
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Preference number: 4 (lower is better) Translates to: IEFSMPACTIKS*TFFCKSSMRFP Trigger: GGGAAATCGCATTGAGGACTTACAGAAGAATGTCAAGGACTTAATGGTGCAAGCTGGCATTGAAAATTCTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| 3UTR CAA 72 bp | AAATACTTCAGATTGGGTGGTTTAAACAACAGAAACTaGTCTTTTCACAGTTCTGTTTTCTGGAAGTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: KYFRLGGLNNRN*SFHSSVFWKSQ Trigger: CTGGGACTTCCAGAAAACAGAACTGTGAAAAGACAAGTTTCTGTTGTTTAAACCACCCAATCTGAAGTATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000451882.3 |
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| CDS-3UTR CAA 90 bp | CCTTCTCTGGTGCAGGCACGGAGGGGAGAGCAGGCGAGCCCCTTGCGTCTCTTCTGCACCATTAAGTCCTaGACATTCTTCTGTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PSLVQARRGEQASPLRLFCTIKS*TFFCKS Trigger: GGACTTACAGAAGAATGTCAAGGACTTAATGGTGCA...GAAGAGACGCAAGGGGCTCGCCTGCTCTCCCCTCCGTGCCTGCACCAGAGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS-3UTR CAA 90 bp | AGAGGCCCCATCTCCAAATACAGACATGCTGCAGTTAGGTCTTCAGCATTTGTTTGGGGAGGGCTCTCCTaGGCTTGCCGATGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: RGPISKYRHAAVRSSAFVWGGLS*ACRWPP Trigger: AGGAGGCCATCGGCAAGCCAAGGAGAGCCCTCCCCA...AACAAATGCTGAAGACCTAACTGCAGCATGTCTGTATTTGGAGATGGGGCCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000589516.1 |
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| CDS-3UTR CAA 90 bp | TGTAACCTTAATGACTTCTGTAGAGGCCCCATCTCCAAATACAGACATGCTGCATGGGGAGGGCTCTCCTaGGCTTGCCGATGGCCTCCT | + |
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Preference number: 5 (lower is better) Translates to: CNLNDFCRGPISKYRHAAWGGLS*ACRWPP Trigger: AGGAGGCCATCGGCAAGCCAAGGAGAGCCCTCCCCA...TGCAGCATGTCTGTATTTGGAGATGGGGCCTCTACAGAAGTCATTAAGGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS TCA 90 bp | CAGGATGTCCTCAGAGACTCCGCCTCCCATGGCACATGCAACTTTTaGAATGAGGGAATCAACGACAGGCCTAGTGTCCATGCAAATCAG | + |
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Preference number: 5 (lower is better) Translates to: QDVLRDSASHGTCNF*NEGINDRPSVHANQ Trigger: CTGATTTGCATGGACACTAGGCCTGTCGTTGATTCCCTCATTTCAAAAGTTGCATGTGCCATGGGAGGCGGAGTCTCTGAGGACATCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000587347.1 |
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| CDS-3UTR CAA 90 bp | CCTCAGGACCGATGTAACCTTAATGACTTCTGTAGAGGCCCCATCTCCAAATACTGCACCATTAAGTCCTaGACATTCTTCTGTAAGTCC | + |
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Preference number: 5 (lower is better) Translates to: PQDRCNLNDFCRGPISKYCTIKS*TFFCKS Trigger: GGACTTACAGAAGAATGTCAAGGACTTAATGGTGCA...GTATTTGGAGATGGGGCCTCTACAGAAGTCATTAAGGTTACATCGGTCCTGAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000451882.3 ENST00000589516.1 |
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| CDS GCA 90 bp | TGTTCACCCCTGATTTTAATAACGTTCTCACTGGTGCTTTGTGGCTaGAGTACAGTTGAAATCATAATGATTTGGACTCTGTATTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: CSPLILITFSLVLCG*STVEIIMIWTLYFK Trigger: CTTGAAATACAGAGTCCAAATCATTATGATTTCAACTGTACTGCAGCCACAAAGCACCAGTGAGAACGTTATTAAAATCAGGGGTGAACA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS GCA 90 bp | ACTCTGTATTTCAAGTTTATCTCATTATGTACCTGCTGTCTACCTTaGCCTGACTTAAGTGCTTTGCAAGCAATTTTCTTAAATCCTTAC | + |
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Preference number: 5 (lower is better) Translates to: TLYFKFISLCTCCLP*PDLSALQAIFLNPY Trigger: GTAAGGATTTAAGAAAATTGCTTGCAAAGCACTTAAGTCAGGGCAAGGTAGACAGCAGGTACATAATGAGATAAACTTGAAATACAGAGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS GCA 90 bp | ATAATGATTTGGACTCTGTATTTCAAGTTTATCTCATTATGTACCTaGTGTCTACCTTGCCCTGACTTAAGTGCTTTGCAAGCAATTTTC | + |
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Preference number: 5 (lower is better) Translates to: IMIWTLYFKFISLCT*CLPCPDLSALQAIF Trigger: GAAAATTGCTTGCAAAGCACTTAAGTCAGGGCAAGGTAGACAGCAGGTACATAATGAGATAAACTTGAAATACAGAGTCCAAATCATTAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS TCA 72 bp | TCCCCAGGTTACAGCCAGCAACAGAGGATAAGAATTTaGAACCTAGGCCTGCATGGCTGCCAAGCCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: SPGYSQQQRIRI*NLGLHGCQALP Trigger: AGGCAAGGCTTGGCAGCCATGCAGGCCTAGGTTTCAAATTCTTATCCTCTGTTGCTGGCTGTAACCTGGGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS CAA 72 bp | TTCCCCAGGTTACAGCCAGCAACAGAGGATAAGAATTaGAAACCTAGGCCTGCATGGCTGCCAAGCCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: FPRLQPATEDKN*KPRPAWLPSLA Trigger: GGCAAGGCTTGGCAGCCATGCAGGCCTAGGTTTCAAATTCTTATCCTCTGTTGCTGGCTGTAACCTGGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS CCA 72 bp | GCATGGCTGCCAAGCCTTGCCTCGTCTGTGGCACTGTaGTGCTTTAATCAAGTTGGATATACTAGTGGCTCT | + |
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Preference number: 6 (lower is better) Translates to: AWLPSLASSVAL*CFNQVGYTSGS Trigger: AGAGCCACTAGTATATCCAACTTGATTAAAGCACCACAGTGCCACAGACGAGGCAAGGCTTGGCAGCCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS CCA 72 bp | CTAGGCCTGCATGGCTGCCAAGCCTTGCCTCGTCTGTaGCACTGTGGTGCTTTAATCAAGTTGGATATACTA | + |
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Preference number: 6 (lower is better) Translates to: LGLHGCQALPRL*HCGALIKLDIL Trigger: TAGTATATCCAACTTGATTAAAGCACCACAGTGCCACAGACGAGGCAAGGCTTGGCAGCCATGCAGGCCTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS TCA 72 bp | ACTGCACCCGGCCGGAGGTACAGCTTTTGCTATAGGTaGGGGGTAATTAACACATCAGGAAGCCACATAAAA | + |
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Preference number: 6 (lower is better) Translates to: TAPGRRYSFCYR*GVINTSGSHIK Trigger: TTTTATGTGGCTTCCTGATGTGTTAATTACCCCTCACCTATAGCAAAAGCTGTACCTCCGGCCGGGTGCAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000592352.1 |
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| CDS GCA 72 bp | TGGACTCTGTATTTCAAGTTTATCTCATTATGTACCTaGTGTCTACCTTGCCCTGACTTAAGTGCTTTGCAA | + |
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Preference number: 6 (lower is better) Translates to: WTLYFKFISLCT*CLPCPDLSALQ Trigger: TTGCAAAGCACTTAAGTCAGGGCAAGGTAGACAGCAGGTACATAATGAGATAAACTTGAAATACAGAGTCCA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS GCA 72 bp | CTGATTTTAATAACGTTCTCACTGGTGCTTTGTGGCTaGAGTACAGTTGAAATCATAATGATTTGGACTCTG | + |
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Preference number: 6 (lower is better) Translates to: LILITFSLVLCG*STVEIIMIWTL Trigger: CAGAGTCCAAATCATTATGATTTCAACTGTACTGCAGCCACAAAGCACCAGTGAGAACGTTATTAAAATCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS GCA 72 bp | TTCAAGTTTATCTCATTATGTACCTGCTGTCTACCTTaGCCTGACTTAAGTGCTTTGCAAGCAATTTTCTTA | + |
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Preference number: 6 (lower is better) Translates to: FKFISLCTCCLP*PDLSALQAIFL Trigger: TAAGAAAATTGCTTGCAAAGCACTTAAGTCAGGGCAAGGTAGACAGCAGGTACATAATGAGATAAACTTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000590571.1 |
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| CDS TCA 72 bp | ATCACAGCATTTGTTAAAGGTAGAAAAGGATATTTCTaGGGTTTAATGTTGCCGTCAGAGCTTGAAAATGTT | + |
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Preference number: 6 (lower is better) Translates to: ITAFVKGRKGYF*GLMLPSELENV Trigger: AACATTTTCAAGCTCTGACGGCAACATTAAACCTCAGAAATATCCTTTTCTACCTTTAACAAATGCTGTGAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000589516.1 ENST00000592352.1 |
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