Pregenerated sensors for HS6ST1 (Homo sapiens)
Ensembl gene IDs: ENSG00000136720Ensembl transcript IDs: ENST00000463963.1, ENST00000469019.1, ENST00000494089.1
Found 10 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS CCA 90 bp | CAGCCATTCTGTCAAGGGCTGGCCATCTGTGGCCATGGAGCACAGTaGCAGGGCTGTCCAGCTTGGACAAGCCACAGTTGGCCGATCCTC | + |
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Preference number: 5 (lower is better) Translates to: QPFCQGLAICGHGAQ*QGCPAWTSHSWPIL Trigger: GAGGATCGGCCAACTGTGGCTTGTCCAAGCTGGACAGCCCTGCCACTGTGCTCCATGGCCACAGATGGCCAGCCCTTGACAGAATGGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS CCA 90 bp | CTGGCCATCTGTGGCCATGGAGCACAGTGGCAGGGCTGTCCAGCTTaGACAAGCCACAGTTGGCCGATCCTCGACTCTTACGCACTGCTA | + |
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Preference number: 5 (lower is better) Translates to: LAICGHGAQWQGCPA*TSHSWPILDSYALL Trigger: TAGCAGTGCGTAAGAGTCGAGGATCGGCCAACTGTGGCTTGTCCAAGCTGGACAGCCCTGCCACTGTGCTCCATGGCCACAGATGGCCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS CAA 90 bp | GCTGGCCATCTGTGGCCATGGAGCACAGTGGCAGGGCTGTCCAGCTaGGACAAGCCACAGTTGGCCGATCCTCGACTCTTACGCACTGCT | + |
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Preference number: 6 (lower is better) Translates to: AGHLWPWSTVAGLSS*DKPQLADPRLLRTA Trigger: AGCAGTGCGTAAGAGTCGAGGATCGGCCAACTGTGGCTTGTCCAAGCTGGACAGCCCTGCCACTGTGCTCCATGGCCACAGATGGCCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS CCA 72 bp | TGTCAAGGGCTGGCCATCTGTGGCCATGGAGCACAGTaGCAGGGCTGTCCAGCTTGGACAAGCCACAGTTGG | + |
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Preference number: 6 (lower is better) Translates to: CQGLAICGHGAQ*QGCPAWTSHSW Trigger: CCAACTGTGGCTTGTCCAAGCTGGACAGCCCTGCCACTGTGCTCCATGGCCACAGATGGCCAGCCCTTGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS CAA 72 bp | GTCCAAGAGTATGGTGATGGCGTCTGGCAAAGGCCTTaGTGCTATGTCATCCTGGGCGTGCGCAGCGCGGCG | + |
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Preference number: 6 (lower is better) Translates to: VQEYGDGVWQRP*CYVILGVRSAA Trigger: CGCCGCGCTGCGCACGCCCAGGATGACATAGCACAAAGGCCTTTGCCAGACGCCATCACCATACTCTTGGAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS CCA 72 bp | CAGTGGCAGGGCTGTCCAGCTTGGACAAGCCACAGTTaGCCGATCCTCGACTCTTACGCACTGCTAATTCTG | + |
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Preference number: 6 (lower is better) Translates to: QWQGCPAWTSHS*PILDSYALLIL Trigger: CAGAATTAGCAGTGCGTAAGAGTCGAGGATCGGCCAACTGTGGCTTGTCCAAGCTGGACAGCCCTGCCACTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS CAA 72 bp | ACAGTGGCAGGGCTGTCCAGCTTGGACAAGCCACAGTaGGCCGATCCTCGACTCTTACGCACTGCTAATTCT | + |
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Preference number: 6 (lower is better) Translates to: TVAGLSSLDKPQ*ADPRLLRTANS Trigger: AGAATTAGCAGTGCGTAAGAGTCGAGGATCGGCCAACTGTGGCTTGTCCAAGCTGGACAGCCCTGCCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000469019.1 |
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| CDS GCA 72 bp | TTCCCCAAGGAATGCATCTGTCATCTGTTTCCTCCTTaGACAAAACAAGACAATATGCCTCCTGGAGGTCAC | + |
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Preference number: 6 (lower is better) Translates to: FPKECICHLFPP*TKQDNMPPGGH Trigger: GTGACCTCCAGGAGGCATATTGTCTTGTTTTGTGCAAGGAGGAAACAGATGACAGATGCATTCCTTGGGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000494089.1 |
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| CDS CAA 72 bp | ACAGCAAGTGAGAGCACCCACTCACAAGCACAAATATaGCAAAATGTTAACAAGCAGTGGGTCTCGGTGAAA | + |
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Preference number: 6 (lower is better) Translates to: TASESTHSQAQI*QNVNKQWVSVK Trigger: TTTCACCGAGACCCACTGCTTGTTAACATTTTGCAATATTTGTGCTTGTGAGTGGGTGCTCTCACTTGCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463963.1 |
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| CDS CCA 72 bp | TCACAAGCACAAATATTGCAAAATGTTAACAAGCAGTaGGTCTCGGTGAAAGGTATGAGGTTCACTTTACTA | + |
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Preference number: 6 (lower is better) Translates to: SQAQILQNVNKQ*VSVKGMRFTLL Trigger: TAGTAAAGTGAACCTCATACCTTTCACCGAGACCCACTGCTTGTTAACATTTTGCAATATTTGTGCTTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000463963.1 |
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