RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS3ST3B1 (Homo sapiens)

Ensembl gene IDs: ENSG00000125430

Ensembl transcript IDs: ENST00000360954.3, ENST00000466596.5

Found 268 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CGAGGGACACAGCTGACCCCTCTGAGTCTCGACACCCAGCGCCCTTaGTTTGTGCTGGTGGCTCTGCTAGCCTACGGGATTCTTTGGTGT +
Preference number: 1 (lower is better)
Translates to: RGTQLTPLSLDTQRP*FVLVALLAYGILWC
Trigger: ACACCAAAGAATCCCGTAGGCTAGCAGAGCCACCAGCACAAACCAAGGGCGCTGGGTGTCGAGACTCAGAGGGGTCAGCTGTGTCCCTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 90 bp CAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTaGATGAGGCCTGCCCTTCAGAATACAGCCCTGTTGAGGCAGCTC +
Preference number: 1 (lower is better)
Translates to: QATSLDGTPHLQGGC*MRPALQNTALLRQL
Trigger: GAGCTGCCTCAACAGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 90 bp CGCCCTTGGTTTGTGCTGGTGGCTCTGCTAGCCTACGGGATTCTTTaGTGTGTCAAAGCAGAACTGTCTGCCTGGGGAACGCAGCATGGT +
Preference number: 1 (lower is better)
Translates to: RPWFVLVALLAYGIL*CVKAELSAWGTQHG
Trigger: ACCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCTAGCAGAGCCACCAGCACAAACCAAGGGCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 90 bp TTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTaGTGCATGAGGCCTGCCCTTCAGAATACAGCCCTGTTGAGGCAG +
Preference number: 1 (lower is better)
Translates to: FQATSLDGTPHLQGG*CMRPALQNTALLRQ
Trigger: CTGCCTCAACAGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 90 bp GGTAACCCTTCTGTCAAGACCTGGCTAAAACAAGGGACAGCTGTATaGGCATCAGGCTCAAGGGTTTACAGGCAATATGGGCCCAGCTTT +
Preference number: 1 (lower is better)
Translates to: GNPSVKTWLKQGTAV*ASGSRVYRQYGPSF
Trigger: AAAGCTGGGCCCATATTGCCTGTAAACCCTTGAGCCTGATGCTCATACAGCTGTCCCTTGTTTTAGCCAGGTCTTGACAGAAGGGTTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 90 bp TCTGCTAGCCTACGGGATTCTTTGGTGTGTCAAAGCAGAACTGTCTaGCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGA +
Preference number: 1 (lower is better)
Translates to: SASLRDSLVCQSRTV*LGNAAWCSFMQIKG
Trigger: TCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCTAGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 90 bp CTAGCCTACGGGATTCTTTGGTGTGTCAAAGCAGAACTGTCTGCCTaGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGATC +
Preference number: 1 (lower is better)
Translates to: LAYGILWCVKAELSA*GTQHGVVSCKLKEI
Trigger: GATCTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 90 bp CAGGTGTTTTTCACAATCACTCATCAAGAAGGCAGAACCACGCTATaGTTCTGGTATTCCCCTAAGTGCAGGTCCCACACTACTTTCTGG +
Preference number: 1 (lower is better)
Translates to: QVFFTITHQEGRTTL*FWYSPKCRSHTTFW
Trigger: CCAGAAAGTAGTGTGGGACCTGCACTTAGGGGAATACCAGAATCATAGCGTGGTTCTGCCTTCTTGATGAGTGATTGTGAAAAACACCTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 90 bp GCATGGTGTAGTTTCATGCAAATTAAAGGAGATCATCTTGATTTCTaGAGCAGCACCCAGGCATCTCACACATGTGACCTGGGAAAGACG +
Preference number: 1 (lower is better)
Translates to: AWCSFMQIKGDHLDF*SSTQASHTCDLGKT
Trigger: CGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCTGCTTCAGAAATCAAGATGATCTCCTTTAATTTGCATGAAACTACACCATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 90 bp AAAGCTCCTGTGTGTTTTCCTATGGCTTTGTTGCATACTCTTCTCTaGACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCA +
Preference number: 1 (lower is better)
Translates to: KAPVCFPMALLHTLL*TLLQFHINSHIRPS
Trigger: TGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGAAAACACACAGGAGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR GCA 90 bp TGTGTTTTCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTaGAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAG +
Preference number: 1 (lower is better)
Translates to: CVFLWLCCILFSELF*SSTSTATSDHQNDQ
Trigger: CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGAAAACACA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR GCA 90 bp CCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCATGTTATaGTGTAAACCGAAAAGAGGTGTTCTCAGTTTGATTTCAAATAAA +
Preference number: 1 (lower is better)
Translates to: PGEGLGYCLLLQAML*CKPKRGVLSLISNK
Trigger: TTTATTTGAAATCAAACTGAGAACACCTCTTTTCGGTTTACAGCATAACATGGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 90 bp TGTGATATTGCTATATGTTTAACCAACTGCCCCTGTATTACTATATaGCTACTCAATTGCCACTATATTGCTATCTGGTTACCCAACTGT +
Preference number: 1 (lower is better)
Translates to: CDIAICLTNCPCITI*LLNCHYIAIWLPNC
Trigger: ACAGTTGGGTAACCAGATAGCAATATAGTGGCAATTGAGTAGCCATATAGTAATACAGGGGCAGTTGGTTAAACATATAGCAATATCACA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 90 bp CCGAGGGACACAGCTGACCCCTCTGAGTCTCGACACCCAGCGCCCTaGGTTTGTGCTGGTGGCTCTGCTAGCCTACGGGATTCTTTGGTG +
Preference number: 2 (lower is better)
Translates to: PRDTADPSESRHPAP*VCAGGSASLRDSLV
Trigger: CACCAAAGAATCCCGTAGGCTAGCAGAGCCACCAGCACAAACCAAGGGCGCTGGGTGTCGAGACTCAGAGGGGTCAGCTGTGTCCCTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 90 bp GCGCCCTTGGTTTGTGCTGGTGGCTCTGCTAGCCTACGGGATTCTTaGGTGTGTCAAAGCAGAACTGTCTGCCTGGGGAACGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: APLVCAGGSASLRDS*VCQSRTVCLGNAAW
Trigger: CCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCTAGCAGAGCCACCAGCACAAACCAAGGGCGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp CTGGCTGGCTCTGTACCTAGCAGCACCTTGGTAGACGCTGATGCCGAGGGACACGATCATCTTGATTTCTaGAGCAGCACCCAGGCATCT +
Preference number: 2 (lower is better)
Translates to: LAGSVPSSTLVDADAEGHDHLDF*SSTQAS
Trigger: AGATGCCTGGGTGCTGCTTCAGAAATCAAGATGATC...GTGTCCCTCGGCATCAGCGTCTACCAAGGTGCTGCTAGGTACAGAGCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCGACAGGAGAATCGCTTaGACCGGGAGCCAGAGGTTG +
Preference number: 2 (lower is better)
Translates to: VDRARPGEGLGYCLLLQADRRIA*TGSQRL
Trigger: CAACCTCTGGCTCCCGGTTCAAGCGATTCTCCTGTC...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CCA 90 bp TGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTGAAGAGACAGGGAAGCTaGAATGGGAGACCCAAGACA +
Preference number: 2 (lower is better)
Translates to: WLSGYIIGRDTTSARRLLKRQGS*NGRPKT
Trigger: TGTCTTGGGTCTCCCATTCCAGCTTCCCTGTCTCTT...CAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 90 bp TGTCAGACTCCTTCCTCTGTCAGGCTGCCTGTCATTTTGAGGCCTTaGTCTTTTCTCCCTATTGAGGCTGTGAGCCTGCTGCCCAACACT +
Preference number: 2 (lower is better)
Translates to: CQTPSSVRLPVILRP*SFLPIEAVSLLPNT
Trigger: AGTGTTGGGCAGCAGGCTCACAGCCTCAATAGGGAGAAAAGACAAAGGCCTCAAAATGACAGGCAGCCTGACAGAGGAAGGAGTCTGACA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CCA 90 bp GAACTGTCTGCCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGCAAGGAGGCAGCAACTaGAGAACTCAGACGGTGACT +
Preference number: 2 (lower is better)
Translates to: ELSAWGTQHGVVSCKLKEQGGSN*RTQTVT
Trigger: AGTCACCGTCTGAGTTCTCCAGTTGCTGCCTCCTTG...CTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp TACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGCTGCAAGGAGGCTGCTaGATGAGGCCTGCCCTTCAG +
Preference number: 2 (lower is better)
Translates to: YSNEYQSFSCKSEEVQNTLQGGC*MRPALQ
Trigger: CTGAAGGGCAGGCCTCATGCAGCAGCCTCCTTGCAG...CGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp TGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTGAAGCACCATCAATTGTaGAGAAGAGAACGAAATACT +
Preference number: 2 (lower is better)
Translates to: WLSGYIIGRDTTSARRLLKHHQL*RRERNT
Trigger: AGTATTTCGTTCTCTTCTTCACAATTGATGGTGCTT...CAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAGTCTTTTCTCCCTATTaGGGCTGTGAGCCTGCTGCC +
Preference number: 2 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVVFSPY*GCEPAA
Trigger: GGCAGCAGGCTCACAGCCTCAATAGGGAGAAAAGAC...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp AACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAGGCTACTGCTGCATGAGGCCTaGCCTTCAGAATACAGCCCT +
Preference number: 2 (lower is better)
Translates to: NLHNDGLAAKCKLARCRLLLHEA*PSEYSP
Trigger: AGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCAG...TAGCCTACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CCA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAGACTCTAGAAGGATGTaGATAGCGGGCGCAGTGGCT +
Preference number: 2 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVDSRRM*IAGAVA
Trigger: AGCCACTGCGCCCGCTATCCACATCCTTCTAGAGTC...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp ACTTTAAACCATCAGACCCTTGCAGACCCTTATGAGGAGATGCACATGATGTTTAGAATACAGCCCTGTTaGGGCAGCTCAGCGTTCCTA +
Preference number: 2 (lower is better)
Translates to: TLNHQTLADPYEEMHMMFRIQPC*GSSAFL
Trigger: TAGGAACGCTGAGCTGCCTCAACAGGGCTGTATTCT...AAACATCATGTGCATCTCCTCATAAGGGTCTGCAAGGGTCTGATGGTTTAAAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCCGTCCGATGATGGGGTaGAAGCTCCGGCAGATGCTG +
Preference number: 2 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFRPMMG*KLRQML
Trigger: CAGCATCTGCCGGAGCTTGCACCCCATCATCGGACG...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR-3UTR CCA 90 bp CAAGACCTGGCTAAAACAAGGGACAGCTGTATGAGCATCAGGCTCAAGGGTTTACTGGGGAACGCAGCATaGTGTAGTTTCATGCAAATT +
Preference number: 2 (lower is better)
Translates to: QDLAKTRDSCMSIRLKGLLGNAA*CSFMQI
Trigger: AATTTGCATGAAACTACACCATGCTGCGTTCCCCAG...TAAACCCTTGAGCCTGATGCTCATACAGCTGTCCCTTGTTTTAGCCAGGTCTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp AGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGGGAGAACTCAGACGGTaGCTGAAGGCTGAATACCCG +
Preference number: 2 (lower is better)
Translates to: RTGRNLSLMLPNFCSRKMGELRR*LKAEYP
Trigger: CGGGTATTCAGCCTTCAGTCACCGTCTGAGTTCTCC...CATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp AACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAGGCTAAAAGACGCATCAAGCTaGGGTGTCAGACTCCTTCCT +
Preference number: 2 (lower is better)
Translates to: NLHNDGLAAKCKLARCRLKDASS*GVRLLP
Trigger: AGGAAGGAGTCTGACACCTCAGCTTGATGCGTCTTT...TAGCCTACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp AACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAGGCTAGCCACTCTTAGTTCTTaGTGTTTGGCCACTGGCTAC +
Preference number: 2 (lower is better)
Translates to: NLHNDGLAAKCKLARCRLATLSS*CLATGY
Trigger: GTAGCCAGTGGCCAAACAGCAAGAACTAAGAGTGGC...TAGCCTACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCCAATTGCCACTATATTaGTATCTGGTTACCCAACTG +
Preference number: 2 (lower is better)
Translates to: VDRARPGEGLGYCLLLQAQLPLY*YLVTQL
Trigger: CAGTTGGGTAACCAGATAGCAATATAGTGGCAATTG...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCACCTGCTGCCCAACACTaGCTGGCTCTGTACCTAGCA +
Preference number: 2 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPPAAQH*LALYLA
Trigger: TGCTAGGTACAGAGCCAGCCAGTGTTGGGCAGCAGG...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCACAAAGCAGAACTGTCTaGCTGGGGAACGCAGCATGG +
Preference number: 2 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPQSRTV*LGNAAW
Trigger: CCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTG...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 90 bp CCAACTGCCCCTGTATTACTATATGGCTACTCAATTGCCACTATATaGCTATCTGGTTACCCAACTGTTATAAATCAACAGAGAGGCACG +
Preference number: 2 (lower is better)
Translates to: PTAPVLLYGYSIATI*LSGYPTVINQQRGT
Trigger: CGTGCCTCTCTGTTGATTTATAACAGTTGGGTAACCAGATAGCAATATAGTGGCAATTGAGTAGCCATATAGTAATACAGGGGCAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 90 bp AAGGGGGTTTGTCTTCTGGCAGCTAAAAAGTTAAGCCTGGTGGTCTaGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCT +
Preference number: 2 (lower is better)
Translates to: KGVCLLAAKKLSLVV*QIARTGRNLSLMLP
Trigger: AGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAACTTTTTAGCTGCCAGAAGACAAACCCCCTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR-3UTR TCA 90 bp AGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTAACGGTGACTGAAGGCTaGATACCCGTAACAACAAAA +
Preference number: 2 (lower is better)
Translates to: SLVVLQIARTGRNLSLMLTVTEG*IPVTTK
Trigger: TTTTGTTGTTACGGGTATTCAGCCTTCAGTCACCGT...TAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACATGGTATTCCCCTAAGTaGAGGTCCCACACTACTTTC +
Preference number: 2 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTWYSPK*RSHTTF
Trigger: GAAAGTAGTGTGGGACCTGCACTTAGGGGAATACCA...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCACTCACACATGTGACCTaGGAAAGACGGGGCAACAAT +
Preference number: 2 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPLTHVT*ERRGNN
Trigger: ATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAG...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp AACTTGCTCTATTCCATCAGTACTGATTATGGACATCTGTTTGAATTCAAGGATAACTCAGACGGTGACTaGAGGCTGAATACCCGTAAC +
Preference number: 2 (lower is better)
Translates to: NLLYSISTDYGHLFEFKDNSDGD*RLNTRN
Trigger: GTTACGGGTATTCAGCCTTCAGTCACCGTCTGAGTT...ATCCTTGAATTCAAACAGATGTCCATAATCAGTACTGATGGAATAGAGCAAGTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCCCCAGAATAGAATTTTaGCCCACTTCAGTGTTCGTG +
Preference number: 2 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFPRIEF*PTSVFV
Trigger: CACGAACACTGAAGTGGGTCAAAATTCTATTCTGGG...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR-3UTR CCA 90 bp AAAGTGAGAAAACATCTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATGCCTACGGGATTCTTTaGTGTGTCAAAGCAGAACTG +
Preference number: 2 (lower is better)
Translates to: KVRKHLTTPLSFIGHPLDAYGIL*CVKAEL
Trigger: CAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGC...ATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAGATGTTTTCTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR TCA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACCATCCCAACCATTTTaGCAATATGTATATCTTCCC +
Preference number: 2 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTPSQPF*QYVYLP
Trigger: GGGAAGATATACATATTGTCAAAATGGTTGGGATGG...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp CTTTTACTTCAAGCCATGTTATGCTGTAAACCGAAAAGAGGTGTTCTCAGTTTGATATGGCTACTCAATTaGCACTATATTGCTATCTGG +
Preference number: 2 (lower is better)
Translates to: LLLQAMLCCKPKRGVLSLIWLLN*HYIAIW
Trigger: CCAGATAGCAATATAGTGGCAATTGAGTAGCCATAT...CAAACTGAGAACACCTCTTTTCGGTTTACAGCATAACATGGCTTGAAGTAAAAG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR GCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTTCCTATGGCTTTGTTaGATACTCTTCTCTGAACTC +
Preference number: 2 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFFLWLC*ILFSEL
Trigger: GAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGAA...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR CCA 72 bp CAGCTGACCCCTCTGAGTCTCGACACCCAGCGCCCTTaGTTTGTGCTGGTGGCTCTGCTAGCCTACGGGATT +
Preference number: 3 (lower is better)
Translates to: QLTPLSLDTQRP*FVLVALLAYGI
Trigger: AATCCCGTAGGCTAGCAGAGCCACCAGCACAAACCAAGGGCGCTGGGTGTCGAGACTCAGAGGGGTCAGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 72 bp TCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTaGATGAGGCCTGCCCTTCAGAATACAGCCCTGTTG +
Preference number: 3 (lower is better)
Translates to: SLDGTPHLQGGC*MRPALQNTALL
Trigger: CAACAGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 72 bp ACATCATTGGACGGGACACCACATCTGCAAGGAGGCTaGTGCATGAGGCCTGCCCTTCAGAATACAGCCCTG +
Preference number: 3 (lower is better)
Translates to: TSLDGTPHLQGG*CMRPALQNTAL
Trigger: CAGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 72 bp CAGAACCCTAGGGCTGTGGCTTTCAGGCTACATCATTaGACGGGACACCACATCTGCAAGGAGGCTGCTGCA +
Preference number: 3 (lower is better)
Translates to: QNPRAVAFRLHH*TGHHICKEAAA
Trigger: TGCAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 72 bp GTGCTGAATGGAGGGAGGGACAGAACCCTAGGGCTGTaGCTTTCAGGCTACATCATTGGACGGGACACCACA +
Preference number: 3 (lower is better)
Translates to: VLNGGRDRTLGL*LSGYIIGRDTT
Trigger: TGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCTGTCCCTCCCTCCATTCAGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 72 bp CTTCTGCAGCAGGAAGATGACCGTCCGATGATGGGGTaGAAGCTCCGGCAGATGCTGCAACCAGATCTGTTA +
Preference number: 3 (lower is better)
Translates to: LLQQEDDRPMMG*KLRQMLQPDLL
Trigger: TAACAGATCTGGTTGCAGCATCTGCCGGAGCTTGCACCCCATCATCGGACGGTCATCTTCCTGCTGCAGAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR GCA 72 bp CTACGGGATTCTTTGGTGTGTCAAAGCAGAACTGTCTaGCTGGGGAACGCAGCATGGTGTAGTTTCATGCAA +
Preference number: 3 (lower is better)
Translates to: LRDSLVCQSRTV*LGNAAWCSFMQ
Trigger: TTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 72 bp TCTGAAGCAGCACCCAGGCATCTCACACATGTGACCTaGGAAAGACGGGGCAACAATCTACATACACTTCAA +
Preference number: 3 (lower is better)
Translates to: SEAAPRHLTHVT*ERRGNNLHTLQ
Trigger: TTGAAGTGTATGTAGATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCTGCTTCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CAA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTACAGAATACAGCCCTGTaGAGGCAGCTCAGCGTTCCT +
Preference number: 3 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVQNTAL*RQLSVP
Trigger: AGGAACGCTGAGCTGCCTCAACAGGGCTGTATTCTG...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CAA 90 bp TGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACGACCAGGTGAAGGACTaGGATACTGCCTTTTACTTC +
Preference number: 3 (lower is better)
Translates to: CILFSELFCSSTSTATSDDQVKD*DTAFYF
Trigger: GAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTC...GTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR TCA 72 bp GGCAGCAACTGGAGAACTCAGACGGTGACTGAAGGCTaGATACCCGTAACAACAAAAATCTCAAGTTGTGCT +
Preference number: 3 (lower is better)
Translates to: GSNWRTQTVTEG*IPVTTKISSCA
Trigger: AGCACAACTTGAGATTTTTGTTGTTACGGGTATTCAGCCTTCAGTCACCGTCTGAGTTCTCCAGTTGCTGCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 72 bp TTCACAATCACTCATCAAGAAGGCAGAACCACGCTATaGTTCTGGTATTCCCCTAAGTGCAGGTCCCACACT +
Preference number: 3 (lower is better)
Translates to: FTITHQEGRTTL*FWYSPKCRSHT
Trigger: AGTGTGGGACCTGCACTTAGGGGAATACCAGAATCATAGCGTGGTTCTGCCTTCTTGATGAGTGATTGTGAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CCA 72 bp GGGATTCTTTGGTGTGTCAAAGCAGAACTGTCTGCCTaGGGAACGCAGCATGGTGTAGTTTCATGCAAATTA +
Preference number: 3 (lower is better)
Translates to: GILWCVKAELSA*GTQHGVVSCKL
Trigger: TAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 72 bp CTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTaGAGTTCCACATCAACAGCCACATCAGACCATCAG +
Preference number: 3 (lower is better)
Translates to: LWLCCILFSELF*SSTSTATSDHQ
Trigger: CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR CCA 72 bp TGTCAAAGCAGAACTGTCTGCCTGGGGAACGCAGCATaGTGTAGTTTCATGCAAATTAAAGGAGATCATCTT +
Preference number: 3 (lower is better)
Translates to: CQSRTVCLGNAA*CSFMQIKGDHL
Trigger: AAGATGATCTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CAA 90 bp AAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAGCCTACGGGATTCTTaGGTGTGTCAAAGCAGAACT +
Preference number: 3 (lower is better)
Translates to: KQNLHNDGLAAKCKLARCSLRDS*VCQSRT
Trigger: AGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCT...ACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 72 bp AGTTTCATGCAAATTAAAGGAGATCATCTTGATTTCTaGAGCAGCACCCAGGCATCTCACACATGTGACCTG +
Preference number: 3 (lower is better)
Translates to: SFMQIKGDHLDF*SSTQASHTCDL
Trigger: CAGGTCACATGTGTGAGATGCCTGGGTGCTGCTTCAGAAATCAAGATGATCTCCTTTAATTTGCATGAAACT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 72 bp ACCAACTGCCCCTGTATTACTATATGGCTACTCAATTaGCACTATATTGCTATCTGGTTACCCAACTGTTAT +
Preference number: 3 (lower is better)
Translates to: TNCPCITIWLLN*HYIAIWLPNCY
Trigger: ATAACAGTTGGGTAACCAGATAGCAATATAGTGGCAATTGAGTAGCCATATAGTAATACAGGGGCAGTTGGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR GCA 72 bp GGACTTGGATACTGCCTTTTACTTCAAGCCATGTTATaGTGTAAACCGAAAAGAGGTGTTCTCAGTTTGATT +
Preference number: 3 (lower is better)
Translates to: GLGYCLLLQAML*CKPKRGVLSLI
Trigger: AATCAAACTGAGAACACCTCTTTTCGGTTTACAGCATAACATGGCTTGAAGTAAAAGGCAGTATCCAAGTCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR-3UTR CAA 90 bp CTTTTACTTCAAGCCATGTTATGCTGTAAACCGAAAAGAGGTGTTCTCAGTTTGTCAATTGCCACTATATaGCTATCTGGTTACCCAACT +
Preference number: 3 (lower is better)
Translates to: LLLQAMLCCKPKRGVLSLSIATI*LSGYPT
Trigger: AGTTGGGTAACCAGATAGCAATATAGTGGCAATTGA...CAAACTGAGAACACCTCTTTTCGGTTTACAGCATAACATGGCTTGAAGTAAAAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR TCA 72 bp AAAGTGTCCTTTGTAACTATCCCATCCCAACCATTTTaGCAATATGTATATCTTCCCACATATTCCTTGATG +
Preference number: 3 (lower is better)
Translates to: KVSFVTIPSQPF*QYVYLPTYSLM
Trigger: CATCAAGGAATATGTGGGAAGATATACATATTGTCAAAATGGTTGGGATGGGATAGTTACAAAGGACACTTT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 72 bp ACAGCTGACCCCTCTGAGTCTCGACACCCAGCGCCCTaGGTTTGTGCTGGTGGCTCTGCTAGCCTACGGGAT +
Preference number: 4 (lower is better)
Translates to: TADPSESRHPAP*VCAGGSASLRD
Trigger: ATCCCGTAGGCTAGCAGAGCCACCAGCACAAACCAAGGGCGCTGGGTGTCGAGACTCAGAGGGGTCAGCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp TGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTGGCCGCACGCCGGGGCTaGCTCCTTGCAGTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: WLSGYIIGRDTTSARRLLAARRG*LLAVLR
Trigger: TCTTAGGACTGCAAGGAGGCAGCCCCGGCGTGCGGC...CAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCTGCTGGGCGAGGGTCTaGTCCCGGGGCGCGACGACG +
Preference number: 4 (lower is better)
Translates to: VDRARPGEGLGYCLLLQACWARV*SRGATT
Trigger: CGTCGTCGCGCCCCGGGAGCAGACCCTCGCCCAGCA...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp AGCACCCAGGCATCTCACACATGTGACCTGGGAAAGACGGGGCAACAATCTACAGCGCGGCCAGGGACATaGCTCAGCACATGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: STQASHTCDLGKTGQQSTARPGT*LSTWRG
Trigger: CCCACGCCATGTGCTGAGCCATGTCCCTGGCCGCGC...TGTAGATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCAGCCAGTGGGGTGGCTaGCGGCGCCCGGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: VDRARPGEGLGYCLLLQASQWGG*RRPERQ
Trigger: CTGCCGTTCCGGGCGCCGCCAGCCACCCCACTGGCT...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp GAACTGTCTGCCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGGCCCGCGGCCGCCGCTaGTGCTGCTGCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ELSAWGTQHGVVSCKLKEARGRR*CCCSSP
Trigger: TGGGGAAGAGCAGCAGCAGCAGCGGCGGCCGCGGGC...CTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp AGAACCCTAGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTATGGCCTGCGGCAGCTaGTTGCTCCCAGACCCACTG +
Preference number: 4 (lower is better)
Translates to: RTLGLWLSGYIIGRDTTSMACGS*LLPDPL
Trigger: CAGTGGGTCTGGGAGCAAGCAGCTGCCGCAGGCCAT...AGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp GAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAGGGTTCCCCGGCACGCTaGACGCCCGGGTGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: ELFCSSTSTATSDHQNDQGSPAR*TPGWLG
Trigger: ACCGAGCCACCCGGGCGTCCAGCGTGCCGGGGAACC...CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR CAA 72 bp TGCTGCATGAGGCCTGCCCTTCAGAATACAGCCCTGTaGAGGCAGCTCAGCGTTCCTACGAGGTACACAGGC +
Preference number: 4 (lower is better)
Translates to: CCMRPALQNTAL*RQLSVPTRYTG
Trigger: GCCTGTGTACCTCGTAGGAACGCTGAGCTGCCTCAACAGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp TGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCGCCGCTGCTGCTGCTaGTCTTCCCCAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: CILFSELFCSSTSTATSDRRCCC*SSPGGG
Trigger: GCCGCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCG...GTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCGGCCGCCGCTGCTGCTaGTGCTCTTCCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCGRRCC*CSSPGG
Trigger: GCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCGGCC...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCCTGAAGCCAGTGGGGTaGCTGGCGGCGCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCLKPVG*LAAPGT
Trigger: CGTTCCGGGCGCCGCCAGCCACCCCACTGGCTTCAG...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGGCTGGAGATGGGGCTTaGGGAGTCCGGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQAGDGA*GVRHLG
Trigger: CCCGAGGTGCCGGACTCCCCAAGCCCCATCTCCAGC...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAGGTCCCGCCGGGCAGTaGGCGCAGAGAGGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVGPAGQ*AQRGFP
Trigger: GGGGAACCCTCTCTGCGCTCACTGCCCGGCGGGACC...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGCACCCAGGCATCTCACACATGTGACCTGGGAAAGACGGGGCAACAATCTACATCTGCAGCAGGAAGATaGCCGTCCGATGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: STQASHTCDLGKTGQQSTSAAGR*PSDDGV
Trigger: CACCCCATCATCGGACGGTCATCTTCCTGCTGCAGA...TGTAGATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAATGCTGGGCGAGGGTCTaGTCCCGGGGCGCGACGACG +
Preference number: 4 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQCWARV*SRGATT
Trigger: CGTCGTCGCGCCCCGGGAGCAGACCCTCGCCCAGCA...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp ACTTTAAACCATCAGACCCTTGCAGACCCTTATGAGGAGATGCACATGATGTTTGCCCGCGGCCGCCGCTaGTGCTGCTGCTCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: TLNHQTLADPYEEMHMMFARGRR*CCCSSP
Trigger: TGGGGAAGAGCAGCAGCAGCAGCGGCGGCCGCGGGC...AAACATCATGTGCATCTCCTCATAAGGGTCTGCAAGGGTCTGATGGTTTAAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCATGGCCTGCGGCAGCTaGTTGCTCCCAGACCCACTG +
Preference number: 4 (lower is better)
Translates to: VDRARPGEGLGYCLLLQAMACGS*LLPDPL
Trigger: CAGTGGGTCTGGGAGCAAGCAGCTGCCGCAGGCCAT...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGCTGCTGCATGAGGCCTaGCCTTCAGAATACAGCCCT +
Preference number: 4 (lower is better)
Translates to: RAVAFRLHHWTGHHICKELLHEA*PSEYSP
Trigger: AGGGCTGTATTCTGAAGGGCAGGCCTCATGCAGCAG...CTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp GAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAGCGCTGGACGCCCGGGTaGCTCGGTTTATTGCCCCCG +
Preference number: 4 (lower is better)
Translates to: ELFCSSTSTATSDHQNDQRWTPG*LGLLPP
Trigger: CGGGGGCAATAAACCGAGCCACCCGGGCGTCCAGCG...CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp TCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCAGCCAGTGGGGTGGCTaGCGGCGCCCGGAACGGCAG +
Preference number: 4 (lower is better)
Translates to: SNEYQSFSCKSEEVQNTCSQWGG*RRPERQ
Trigger: CTGCCGTTCCGGGCGCCGCCAGCCACCCCACTGGCT...GCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGTGCAGTCCTAAGAACTaGGCCTCGAGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQCSPKN*ASSSPG
Trigger: GCCGGGGCTGCTCGAGGCTCAGTTCTTAGGACTGCA...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCGGCCATCTCCTTGCCTaGAGCCAGTGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCGHLLA*SQWGGW
Trigger: CCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCC...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp GAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAGGGCCATCTCCTTGCCTaGAGCCAGTGGGGTGGCTGG +
Preference number: 4 (lower is better)
Translates to: ELFCSSTSTATSDHQNDQGHLLA*SQWGGW
Trigger: CCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCC...CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCGCCGCACGCCGGGGCTaGCTCCTTGCAGTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCAARRG*LLAVLR
Trigger: TCTTAGGACTGCAAGGAGGCAGCCCCGGCGTGCGGC...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp TCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCGGCCGCCGCTGCTGCTaGTGCTCTTCCCCAGGTGGC +
Preference number: 4 (lower is better)
Translates to: SNEYQSFSCKSEEVQNTCGRRCC*CSSPGG
Trigger: GCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCGGCC...GCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp GAACTGTCTGCCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGCATCGAGGCAAGATCTaGCGCCACTCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: ELSAWGTQHGVVSCKLKEHRGKI*RHSGAA
Trigger: GGCAGCGCCTGAGTGGCGGCAGATCTTGCCTCGATG...CTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGCCTCGGCCATCTCCTTaGCTGAAGCCAGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQPRPSP*LKPVGW
Trigger: CCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGG...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp TCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCGGCACCTCGGGACTCTaGTCCTCCGGGCTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: SNEYQSFSCKSEEVQNTCGTSGL*SSGLAA
Trigger: CGCTGCGAGCCCGGAGGAGCAGAGTCCCGAGGTGCC...GCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp ACTTTAAACCATCAGACCCTTGCAGACCCTTATGAGGAGATGCACATGATGTTTGGCACCTCGGGACTCTaGTCCTCCGGGCTCGCAGCG +
Preference number: 4 (lower is better)
Translates to: TLNHQTLADPYEEMHMMFGTSGL*SSGLAA
Trigger: CGCTGCGAGCCCGGAGGAGCAGAGTCCCGAGGTGCC...AAACATCATGTGCATCTCCTCATAAGGGTCTGCAAGGGTCTGATGGTTTAAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp AGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTAGGTTCCCCGGCACGCTaGACGCCCGGGTGGCTCGGT +
Preference number: 4 (lower is better)
Translates to: SLVVLQIARTGRNLSLMLGSPAR*TPGWLG
Trigger: ACCGAGCCACCCGGGCGTCCAGCGTGCCGGGGAACC...TAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCACTGAAGCCAGTGGGGTaGCTGGCGGCGCCCGGAACG +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKALKPVG*LAAPGT
Trigger: CGTTCCGGGCGCCGCCAGCCACCCCACTGGCTTCAG...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR CAA 72 bp GTTTGTGCTGGTGGCTCTGCTAGCCTACGGGATTCTTaGGTGTGTCAAAGCAGAACTGTCTGCCTGGGGAAC +
Preference number: 4 (lower is better)
Translates to: VCAGGSASLRDS*VCQSRTVCLGN
Trigger: GTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCTAGCAGAGCCACCAGCACAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp AGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTAGGCCACTCTAGACTGTaGGCACCGCCGCACGCCGGG +
Preference number: 4 (lower is better)
Translates to: SLVVLQIARTGRNLSLMLGHSRL*APPHAG
Trigger: CCCGGCGTGCGGCGGTGCGCACAGTCTAGAGTGGCC...TAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp TTAAGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGCGCCGCTGCTGCTGCTaGTCTTCCCCAGGTGGCGGC +
Preference number: 4 (lower is better)
Translates to: LSLVVLQIARTGRNLSLMRRCCC*SSPGGG
Trigger: GCCGCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCG...CATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAAGGTGGCTCGGTTTATTaGCCCCGTGTGCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQGGSVY*PRVPAA
Trigger: GGCCGCGGGCACACGGGGGCAATAAACCGAGCCACC...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAAGACGGCGGTAACTGCTaGGCGAGGGTCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQDGGNC*ARVCSR
Trigger: CCGGGAGCAGACCCTCGCCCAGCAGTTACCGCCGTC...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAGACGGCGGTAACTGCTaGGCGAGGGTCTGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKADGGNC*ARVCSR
Trigger: CCGGGAGCAGACCCTCGCCCAGCAGTTACCGCCGTC...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGGGCAGGAGCTGCAACTaGAACGGAAAGTCGGGACGG +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQGRSCN*NGKSGR
Trigger: CCGTCCCGACTTTCCGTTCCAGTTGCAGCTCCTGCC...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCGGCCACTCTAGACTGTaGGCACCGCCGCACGCCGGG +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVGHSRL*APPHAG
Trigger: CCCGGCGTGCGGCGGTGCGCACAGTCTAGAGTGGCC...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCGGGCCAGGAGGACGTTaGACTCTCGCGCCCTGGCCA +
Preference number: 4 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTGPGGR*TLAPWP
Trigger: TGGCCAGGGCGCGAGAGTGCAACGTCCTCCTGGCCC...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp GATGAGCTAGGAATTCCAAAGACGCATCAAGCTGAGGTGTCAGACTCCTTCCTCCAAAGCAGAACTGTCTaGCTGGGGAACGCAGCATGG +
Preference number: 4 (lower is better)
Translates to: DELGIPKTHQAEVSDSFLQSRTV*LGNAAW
Trigger: CCATGCTGCGTTCCCCAGGCAGACAGTTCTGCTTTG...GAGGAAGGAGTCTGACACCTCAGCTTGATGCGTCTTTGGAATTCCTAGCTCATC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCGCGCGGCCAGGGACATaGCTCAGCACATGGCGTGGG +
Preference number: 4 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTARPGT*LSTWRG
Trigger: CCCACGCCATGTGCTGAGCCATGTCCCTGGCCGCGC...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp TACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGGCTGGAGATGGGGCTTaGGGAGTCCGGCACCTCGGG +
Preference number: 4 (lower is better)
Translates to: YSNEYQSFSCKSEEVQNTAGDGA*GVRHLG
Trigger: CCCGAGGTGCCGGACTCCCCAAGCCCCATCTCCAGC...CGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp AGAACCCTAGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGGTTTACAGGCAATATaGGCCCAGCTTTCCCAACCT +
Preference number: 4 (lower is better)
Translates to: RTLGLWLSGYIIGRDTTSGLQAI*AQLSQP
Trigger: AGGTTGGGAAAGCTGGGCCCATATTGCCTGTAAACC...AGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACAGCGGCGGCGGCTCTTaGCATGTTGCCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHSGGGS*HVARQE
Trigger: CTCCTGCCGGGCAACATGTCAAGAGCCGCCGCCGCT...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGGGACGGCGGTAACTaGTGGGCGAGGGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTRDGGN*WARVCS
Trigger: GGAGCAGACCCTCGCCCAGCAGTTACCGCCGTCCCG...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCTTGCCCGGCAGGAGCTaGAACTGGAACGGAAAGTCG +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCLPGRS*NWNGKS
Trigger: CGACTTTCCGTTCCAGTTGCAGCTCCTGCCGGGCAA...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCGGTGGCTCGGTTTATTaGCCCCGTGTGCCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVGGSVY*PRVPAA
Trigger: GGCCGCGGGCACACGGGGGCAATAAACCGAGCCACC...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCACCTCGGCCATCTCCTTaGCTGAAGCCAGTGGGGTGG +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAPRPSP*LKPVGW
Trigger: CCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGG...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACGCTCAGCACATGGCGTaGGTCCCGCCGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHAQHMA*VPPGSE
Trigger: CTCACTGCCCGGCGGGACCCACGCCATGTGCTGAGC...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCACATGGCTCAGCACATaGCGTGGGTCCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTTWLST*RGSRRA
Trigger: TGCCCGGCGGGACCCACGCCATGTGCTGAGCCATGT...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAGCCAGACGCAGAGCATaGCGAAGAGCAGCGCGAGCT +
Preference number: 4 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVARRRA*RRAARA
Trigger: AGCTCGCGCTGCTCTTCGCCATGCTCTGCGTCTGGC...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAGCCAGACGCAGAGCATaGCGAAGAGCAGCGCGAGCT +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAARRRA*RRAARA
Trigger: AGCTCGCGCTGCTCTTCGCCATGCTCTGCGTCTGGC...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGGACTCTAGAAGGATGTaGATAGCGGGCGCAGTGGCT +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQDSRRM*IAGAVA
Trigger: AGCCACTGCGCCCGCTATCCACATCCTTCTAGAGTC...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp AGCACCCAGGCATCTCACACATGTGACCTGGGAAAGACGGGGCAACAATCTACATTAGTTCTTGCTGTTTaGCCACTGGCTACCACCCAT +
Preference number: 4 (lower is better)
Translates to: STQASHTCDLGKTGQQSTLVLAV*PLATTH
Trigger: ATGGGTGGTAGCCAGTGGCCAAACAGCAAGAACTAA...TGTAGATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCAGCGGCGGCGGCTCTTaGCATGTTGCCCGGCAGGAG +
Preference number: 4 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFSGGGS*HVARQE
Trigger: CTCCTGCCGGGCAACATGTCAAGAGCCGCCGCCGCT...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp TGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACGGAGAACTCAGACGGTaGCTGAAGGCTGAATACCCG +
Preference number: 4 (lower is better)
Translates to: CILFSELFCSSTSTATSDGELRR*LKAEYP
Trigger: CGGGTATTCAGCCTTCAGTCACCGTCTGAGTTCTCC...GTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAGAATACAGCCCTGTTaGGGCAGCTCAGCGTTCCTA +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQRIQPC*GSSAFL
Trigger: TAGGAACGCTGAGCTGCCTCAACAGGGCTGTATTCT...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCCAGGGCAAGACCAGGTaGAGGACTTGGATACTGCCT +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCQGKTR*RTWILP
Trigger: AGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTG...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCACGGGACGGCGGTAACTaGTGGGCGAGGGTCTGCTCC +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPRDGGN*WARVCS
Trigger: GGAGCAGACCCTCGCCCAGCAGTTACCGCCGTCCCG...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGTACATAGCCCGGGTCTaGTCAATCCCAGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQYIARV*SIPAKV
Trigger: GACTTTGGCTGGGATTGAGCAGACCCGGGCTATGTA...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAGACACCCAGCGCCCTTaGTTTGTGCTGGTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKADTQRP*FVLVAL
Trigger: CAGAGCCACCAGCACAAACCAAGGGCGCTGGGTGTC...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp AGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGCCCCAAAGAGAATCCTaGGAAGAAAACAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAVAFRLHHWTGHHICKEPQRES*EENNFS
Trigger: GGAGAAATTGTTTTCTTCCCAGGATTCTCTTTGGGG...CTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACATGCAGTCCTAAGAACTaGGCCTCGAGCAGCCCCGGC +
Preference number: 4 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTCSPKN*ASSSPG
Trigger: GCCGGGGCTGCTCGAGGCTCAGTTCTTAGGACTGCA...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp AACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAGGCTAGACAGGAGAATCGCTTaGACCGGGAGCCAGAGGTTG +
Preference number: 4 (lower is better)
Translates to: NLHNDGLAAKCKLARCRLDRRIA*TGSQRL
Trigger: CAACCTCTGGCTCCCGGTTCAAGCGATTCTCCTGTC...TAGCCTACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACACCTTGGTAGACGCTaGTGCCGAGGGACACAGCTG +
Preference number: 4 (lower is better)
Translates to: SLVVLQIARTGRNLSLMLHLGRR*CRGTQL
Trigger: CAGCTGTGTCCCTCGGCATCAGCGTCTACCAAGGTG...TAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp TTAAGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGAAGATGACCGTCCGATaGTGGGGTGCAAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LSLVVLQIARTGRNLSLMKMTVR*WGASSG
Trigger: GCCGGAGCTTGCACCCCATCATCGGACGGTCATCTT...CATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGCAATTGCCACTATATTaGTATCTGGTTACCCAACTG +
Preference number: 4 (lower is better)
Translates to: RAVAFRLHHWTGHHICKEQLPLY*YLVTQL
Trigger: CAGTTGGGTAACCAGATAGCAATATAGTGGCAATTG...CTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp GATGAGCTAGGAATTCCAAAGACGCATCAAGCTGAGGTGTCAGACTCCTTCCTCTGGTATTCCCCTAAGTaGAGGTCCCACACTACTTTC +
Preference number: 4 (lower is better)
Translates to: DELGIPKTHQAEVSDSFLWYSPK*RSHTTF
Trigger: GAAAGTAGTGTGGGACCTGCACTTAGGGGAATACCA...GAGGAAGGAGTCTGACACCTCAGCTTGATGCGTCTTTGGAATTCCTAGCTCATC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp AAAGTGAGAAAACATCTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATGCTCAGCACATGGCGTaGGTCCCGCCGGGCAGTGAG +
Preference number: 4 (lower is better)
Translates to: KVRKHLTTPLSFIGHPLDAQHMA*VPPGSE
Trigger: CTCACTGCCCGGCGGGACCCACGCCATGTGCTGAGC...ATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAGATGTTTTCTCACTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp CTTAAAATACCTTTCCAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACATGGCTCAGCACATaGCGTGGGTCCCGCCGGGCA +
Preference number: 4 (lower is better)
Translates to: LKIPFQVPPTKLTDYCSNTWLST*RGSRRA
Trigger: TGCCCGGCGGGACCCACGCCATGTGCTGAGCCATGT...GTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTGGAAAGGTATTTTAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp GATGAGCTAGGAATTCCAAAGACGCATCAAGCTGAGGTGTCAGACTCCTTCCTCAGAACCCTAGGGCTGTaGCTTTCAGGCTACATCATT +
Preference number: 4 (lower is better)
Translates to: DELGIPKTHQAEVSDSFLRTLGL*LSGYII
Trigger: AATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCT...GAGGAAGGAGTCTGACACCTCAGCTTGATGCGTCTTTGGAATTCCTAGCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp GATGAGCTAGGAATTCCAAAGACGCATCAAGCTGAGGTGTCAGACTCCTTCCTCGCCTACGGGATTCTTTaGTGTGTCAAAGCAGAACTG +
Preference number: 4 (lower is better)
Translates to: DELGIPKTHQAEVSDSFLAYGIL*CVKAEL
Trigger: CAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGC...GAGGAAGGAGTCTGACACCTCAGCTTGATGCGTCTTTGGAATTCCTAGCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp TCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCCTGCTGCCCAACACTaGCTGGCTCTGTACCTAGCA +
Preference number: 4 (lower is better)
Translates to: SNEYQSFSCKSEEVQNTCPAAQH*LALYLA
Trigger: TGCTAGGTACAGAGCCAGCCAGTGTTGGGCAGCAGG...GCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp TGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTGTTATGGACATCTGTTTaGATTCAAGGATTTGACCCA +
Preference number: 4 (lower is better)
Translates to: WLSGYIIGRDTTSARRLLLWTSV*IQGFDP
Trigger: TGGGTCAAATCCTTGAATTCAAACAGATGTCCATAA...CAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp TACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTCTGCAGCAGGAAGATaGCCGTCCGATGATGGGGTG +
Preference number: 4 (lower is better)
Translates to: YSNEYQSFSCKSEEVQNTSAAGR*PSDDGV
Trigger: CACCCCATCATCGGACGGTCATCTTCCTGCTGCAGA...CGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCATCTGTCACACAAAATaGCCCCCAAAGAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: VDRARPGEGLGYCLLLQAICHTK*PPKRIL
Trigger: CAGGATTCTCTTTGGGGGTCATTTTGTGTGACAGAT...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp TTAAGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGCGGCTCTTGACATGTTaGCCGGCAGGAGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: LSLVVLQIARTGRNLSLMRLLTC*PAGAAT
Trigger: AGTTGCAGCTCCTGCCGGGCAACATGTCAAGAGCCG...CATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCACATCGAGGCAAGATCTaGCGCCACTCAGGCGCTGCC +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPHRGKI*RHSGAA
Trigger: GGCAGCGCCTGAGTGGCGGCAGATCTTGCCTCGATG...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACCGTCCGATGATGGGGTaGAAGCTCCGGCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHRPMMG*KLRQML
Trigger: CAGCATCTGCCGGAGCTTGCACCCCATCATCGGACG...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCCGTGCCAGGACAAATTaGCGAAACAGAAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCRARTN*RNRKGG
Trigger: ACCCCCTTTTCTGTTTCGGCAATTTGTCCTGGCACG...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCGAAGTCCAAAACACGTaGCAGGACAAATTGCCGAAA +
Preference number: 4 (lower is better)
Translates to: VDRARPGEGLGYCLLLQAEVQNT*QDKLPK
Trigger: TTTCGGCAATTTGTCCTGGCACGTGTTTTGGACTTC...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCGGCAGGAGCTGCAACTaGAACGGAAAGTCGGGACGG +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVGRSCN*NGKSGR
Trigger: CCGTCCCGACTTTCCGTTCCAGTTGCAGCTCCTGCC...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCGATCATCTTGATTTCTaGAGCAGCACCCAGGCATCT +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCDHLDF*SSTQAS
Trigger: AGATGCCTGGGTGCTGCTTCAGAAATCAAGATGATC...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCGTCTTTTCTCCCTATTaGGGCTGTGAGCCTGCTGCC +
Preference number: 4 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTVFSPY*GCEPAA
Trigger: GGCAGCAGGCTCACAGCCTCAATAGGGAGAAAAGAC...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTTAAAATACCTTTCCAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACAAGATGACCGTCCGATaGTGGGGTGCAAGCTCCGGC +
Preference number: 4 (lower is better)
Translates to: LKIPFQVPPTKLTDYCSNKMTVR*WGASSG
Trigger: GCCGGAGCTTGCACCCCATCATCGGACGGTCATCTT...GTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTGGAAAGGTATTTTAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp GAACTGTCTGCCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGATCTGTCACACAAAATaGCCCCCAAAGAGAATCCTG +
Preference number: 4 (lower is better)
Translates to: ELSAWGTQHGVVSCKLKEICHTK*PPKRIL
Trigger: CAGGATTCTCTTTGGGGGTCATTTTGTGTGACAGAT...CTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp CTTTTACTTCAAGCCATGTTATGCTGTAAACCGAAAAGAGGTGTTCTCAGTTTGCGGCTCTTGACATGTTaGCCGGCAGGAGCTGCAACT +
Preference number: 4 (lower is better)
Translates to: LLLQAMLCCKPKRGVLSLRLLTC*PAGAAT
Trigger: AGTTGCAGCTCCTGCCGGGCAACATGTCAAGAGCCG...CAAACTGAGAACACCTCTTTTCGGTTTACAGCATAACATGGCTTGAAGTAAAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp GCTAGCCTACGGGATTCTTTGGTGTGTCAAAGCAGAACTGTCTGCCTGGGGAACATATGGCTACTCAATTaGCACTATATTGCTATCTGG +
Preference number: 4 (lower is better)
Translates to: ASLRDSLVCQSRTVCLGNIWLLN*HYIAIW
Trigger: CCAGATAGCAATATAGTGGCAATTGAGTAGCCATAT...GTTCCCCAGGCAGACAGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCTAGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCGAAGGACTTGGATACTaGCTTTTACTTCAAGCCATG +
Preference number: 4 (lower is better)
Translates to: VDRARPGEGLGYCLLLQAEGLGY*LLLQAM
Trigger: CATGGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTC...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CAAGCTCCGGCAGATGCTGCAACCAGATCTGTTAGGAACTTTAAACCATCAGACATGTTACCTAACTTCTaGAGCAGGAAGATGACCGTC +
Preference number: 4 (lower is better)
Translates to: QAPADAATRSVRNFKPSDMLPNF*SRKMTV
Trigger: GACGGTCATCTTCCTGCTGCAGAAGTTAGGTAACAT...GTCTGATGGTTTAAAGTTCCTAACAGATCTGGTTGCAGCATCTGCCGGAGCTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp TGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCTGCTGTGGGCAAATACATACTaGATTTTCAAGACATCACTT +
Preference number: 4 (lower is better)
Translates to: WLSGYIIGRDTTSARRLLWANTY*IFKTSL
Trigger: AAGTGATGTCTTGAAAATCCAGTATGTATTTGCCCA...CAGCAGCCTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCAGGCATCTCACACATGTaGCCTGGGAAAGACGGGGCA +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPGISHM*PGKDGA
Trigger: TGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCC...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACAGGGCAAGACCAGGTaGAGGACTTGGATACTGCCT +
Preference number: 4 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTQGKTR*RTWILP
Trigger: AGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTG...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCGTGTTCGTGACTAAATaGCCCTCCTTCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCVFVTK*PSFYQK
Trigger: TTTCTGGTAGAAGGAGGGTCATTTAGTCACGAACAC...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCATTGCCCGGCAGGAGCTaGAACTGGAACGGAAAGTCG +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPLPGRS*NWNGKS
Trigger: CGACTTTCCGTTCCAGTTGCAGCTCCTGCCGGGCAA...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AAAGTGAGAAAACATCTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATCTGCAAGGAGGCTGCTaGATGAGGCCTGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: KVRKHLTTPLSFIGHPLDLQGGC*MRPALQ
Trigger: CTGAAGGGCAGGCCTCATGCAGCAGCCTCCTTGCAG...ATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAGATGTTTTCTCACTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp AACTTGCTCTATTCCATCAGTACTGATTATGGACATCTGTTTGAATTCAAGGATCGTCCGATGATGGGGTaGAAGCTCCGGCAGATGCTG +
Preference number: 4 (lower is better)
Translates to: NLLYSISTDYGHLFEFKDRPMMG*KLRQML
Trigger: CAGCATCTGCCGGAGCTTGCACCCCATCATCGGACG...ATCCTTGAATTCAAACAGATGTCCATAATCAGTACTGATGGAATAGAGCAAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAATTCAGGCTACATCATTaGACGGGACACCACATCTGC +
Preference number: 4 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQFRLHH*TGHHIC
Trigger: GCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAA...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTACTCACACATGTGACCTaGGAAAGACGGGGCAACAAT +
Preference number: 4 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVLTHVT*ERRGNN
Trigger: ATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAG...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCGCAGAACTGTCTGCCTaGGGAACGCAGCATGGTGTA +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVAELSA*GTQHGV
Trigger: TACACCATGCTGCGTTCCCCAGGCAGACAGTTCTGC...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAACTCAGACGGTGACTaGAGGCTGAATACCCGTAAC +
Preference number: 4 (lower is better)
Translates to: KQNLHNDGLAAKCKLARCNSDGD*RLNTRN
Trigger: GTTACGGGTATTCAGCCTTCAGTCACCGTCTGAGTT...ACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp ATCCCCCATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTCCATCCCAACCATTTTaGCAATATGTATATCTTCCC +
Preference number: 4 (lower is better)
Translates to: IPHELPPKQNLHNDGLAAPSQPF*QYVYLP
Trigger: GGGAAGATATACATATTGTCAAAATGGTTGGGATGG...AGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCATGGGGGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCATACACAGATCCCCCATaGGCTTCCTCCAAAACAGAA +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAYTDPP*ASSKTE
Trigger: TTCTGTTTTGGAGGAAGCTCATGGGGGATCTGTGTA...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTAGGCTACCACTTCAGTGTTCGTaGCTAAATGACCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: NLHNDGLAAKCKLARCRLPLQCS*LNDPPS
Trigger: AGAAGGAGGGTCATTTAGTCACGAACACTGAAGTGG...TAGCCTACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACAAGGAGGCAGCAACTaGAGAACTCAGACGGTGACT +
Preference number: 4 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTQGGSN*RTQTVT
Trigger: AGTCACCGTCTGAGTTCTCCAGTTGCTGCCTCCTTG...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp ATGAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAGTAATCCCAGATACTTaGGAGGCTGAGACAGGAGAA +
Preference number: 4 (lower is better)
Translates to: MSFLQNRTYTMMVWLLSVVIPDT*EAETGE
Trigger: TTCTCCTGTCTCAGCCTCCCAAGTATCTGGGATTAC...TACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCCCCCAAAGAGAATCCTaGGAAGAAAACAATTTCTCC +
Preference number: 4 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCPQRES*EENNFS
Trigger: GGAGAAATTGTTTTCTTCCCAGGATTCTCTTTGGGG...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR CAA 72 bp GAGCTTCCTCCAAAACAGAACCTACACAATGATGGTTaGGCTGCTAAGTGTAAGCTAGCTAGATGTAGGCTA +
Preference number: 4 (lower is better)
Translates to: ELPPKQNLHNDG*AAKCKLARCRL
Trigger: TAGCCTACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTTTGGAGGAAGCTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCGGCAGAACCACGCTATaGTTCTGGTATTCCCCTAAG +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVGRTTL*FWYSPK
Trigger: CTTAGGGGAATACCAGAATCATAGCGTGGTTCTGCC...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAAATCAGACCATCAGAATaGTCAGAAAGTAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQIRPSE*SESRQG
Trigger: GCCCTGTCTACTTTCTGATCATTCTGATGGTCTGAT...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAGTGTTCGTGACTAAATaGCCCTCCTTCTACCAGAAA +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAVFVTK*PSFYQK
Trigger: TTTCTGGTAGAAGGAGGGTCATTTAGTCACGAACAC...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCCCTTGCAGACCCTTATaGGGAGATGCACATGATGTT +
Preference number: 4 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTPCRPL*GDAHDV
Trigger: AACATCATGTGCATCTCCTCATAAGGGTCTGCAAGG...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTACATAGCCCGGGTCTaGTCAATCCCAGCCAAAGTC +
Preference number: 4 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFYIARV*SIPAKV
Trigger: GACTTTGGCTGGGATTGAGCAGACCCGGGCTATGTA...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGCGTGCCAGGACAAATTaGCGAAACAGAAAAGGGGGT +
Preference number: 4 (lower is better)
Translates to: RTGRNLSLMLPNFCSRKMRARTN*RNRKGG
Trigger: ACCCCCTTTTCTGTTTCGGCAATTTGTCCTGGCACG...CATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGACATACACTTCAAACTaGTTAATGAACCAGGGAATG +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQTYTSN*LMNQGM
Trigger: CATTCCCTGGTTCATTAACCAGTTTGAAGTGTATGT...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp GAACTGTCTGCCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGCCCTGTATTACTATATaGCTACTCAATTGCCACTAT +
Preference number: 4 (lower is better)
Translates to: ELSAWGTQHGVVSCKLKEPCITI*LLNCHY
Trigger: ATAGTGGCAATTGAGTAGCCATATAGTAATACAGGG...CTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACCCACTTCAGTGTTCGTaGCTAAATGACCCTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHPLQCS*LNDPPS
Trigger: AGAAGGAGGGTCATTTAGTCACGAACACTGAAGTGG...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCCCTTGCAGACCCTTATaGGGAGATGCACATGATGTT +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVPCRPL*GDAHDV
Trigger: AACATCATGTGCATCTCCTCATAAGGGTCTGCAAGG...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTTAAAATACCTTTCCAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACGCCACTCTTAGTTCTTaGTGTTTGGCCACTGGCTAC +
Preference number: 4 (lower is better)
Translates to: LKIPFQVPPTKLTDYCSNATLSS*CLATGY
Trigger: GTAGCCAGTGGCCAAACAGCAAGAACTAAGAGTGGC...GTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTGGAAAGGTATTTTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAGAAGGACTTGGATACTaGCTTTTACTTCAAGCCATG +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAEGLGY*LLLQAM
Trigger: CATGGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTC...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp TACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGGAAGTCCAAAACACGTaGCAGGACAAATTGCCGAAA +
Preference number: 4 (lower is better)
Translates to: YSNEYQSFSCKSEEVQNTEVQNT*QDKLPK
Trigger: TTTCGGCAATTTGTCCTGGCACGTGTTTTGGACTTC...CGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGTACCAGAATTTCACTTaGCTAGAAACATCTTTCTCT +
Preference number: 4 (lower is better)
Translates to: LFSELFCSSTSTATSDHQYQNFT*LETSFS
Trigger: AGAGAAAGATGTTTCTAGGCAAGTGAAATTCTGGTA...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCAAGAGACAGGGAAGCTaGAATGGGAGACCCAAGACA +
Preference number: 4 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFKRQGS*NGRPKT
Trigger: TGTCTTGGGTCTCCCATTCCAGCTTCCCTGTCTCTT...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CCA 90 bp TACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGCTGGGGAACGCAGCATaGTGTAGTTTCATGCAAATT +
Preference number: 4 (lower is better)
Translates to: YSNEYQSFSCKSEEVQNTLGNAA*CSFMQI
Trigger: AATTTGCATGAAACTACACCATGCTGCGTTCCCCAG...CGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 72 bp TGTCTTCTGGCAGCTAAAAAGTTAAGCCTGGTGGTCTaGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTT +
Preference number: 4 (lower is better)
Translates to: CLLAAKKLSLVV*QIARTGRNLSL
Trigger: AAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAACTTTTTAGCTGCCAGAAGACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp TTAAGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTGCAAAATCAAAAGCTaGAGTCAACAGACCCTACCA +
Preference number: 4 (lower is better)
Translates to: LSLVVLQIARTGRNLSLMCKIKS*SQQTLP
Trigger: TGGTAGGGTCTGTTGACTTCAGCTTTTGATTTTGCA...CATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGATCAGACCATCAGAATaGTCAGAAAGTAGACAGGGC +
Preference number: 4 (lower is better)
Translates to: RTGRNLSLMLPNFCSRKMIRPSE*SESRQG
Trigger: GCCCTGTCTACTTTCTGATCATTCTGATGGTCTGAT...CATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR TCA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACCCCAGAATAGAATTTTaGCCCACTTCAGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHPRIEF*PTSVFV
Trigger: CACGAACACTGAAGTGGGTCAAAATTCTATTCTGGG...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCCCTTCTGTCAAGACCTaGCTAAAACAAGGGACAGCT +
Preference number: 4 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFPSVKT*LKQGTA
Trigger: AGCTGTCCCTTGTTTTAGCCAGGTCTTGACAGAAGG...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAAAGCACCATCAATTGTaGAGAAGAGAACGAAATACT +
Preference number: 4 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAKHHQL*RRERNT
Trigger: AGTATTTCGTTCTCTTCTTCACAATTGATGGTGCTT...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCAACGGTGACTGAAGGCTaGATACCCGTAACAACAAAA +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPTVTEG*IPVTTK
Trigger: TTTTGTTGTTACGGGTATTCAGCCTTCAGTCACCGT...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAAATACTATCAGGCAAGTaGTCCCATACAACATACAAA +
Preference number: 4 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQILSGK*SHTTYK
Trigger: TTTGTATGTTGTATGGGATCACTTGCCTGATAGTAT...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp AAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTCTTCAAGCCATGTTATaGTGTAAACCGAAAAGAGGT +
Preference number: 4 (lower is better)
Translates to: KQNLHNDGLAAKCKLARCLQAML*CKPKRG
Trigger: ACCTCTTTTCGGTTTACAGCATAACATGGCTTGAAG...ACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR GCA 90 bp CTTAAAATACCTTTCCAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACATGTTACCTAACTTCTaGAGCAGGAAGATGACCGTC +
Preference number: 4 (lower is better)
Translates to: LKIPFQVPPTKLTDYCSNMLPNF*SRKMTV
Trigger: GACGGTCATCTTCCTGCTGCAGAAGTTAGGTAACAT...GTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTGGAAAGGTATTTTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCATTGCTGTTTGGCCACTaGCTACCACCCATATTATCA +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPLLFGH*LPPILS
Trigger: TGATAATATGGGTGGTAGCCAGTGGCCAAACAGCAA...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp AACTTGCTCTATTCCATCAGTACTGATTATGGACATCTGTTTGAATTCAAGGATCCCAGAATAGAATTTTaGCCCACTTCAGTGTTCGTG +
Preference number: 4 (lower is better)
Translates to: NLLYSISTDYGHLFEFKDPRIEF*PTSVFV
Trigger: CACGAACACTGAAGTGGGTCAAAATTCTATTCTGGG...ATCCTTGAATTCAAACAGATGTCCATAATCAGTACTGATGGAATAGAGCAAGTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCTTCCTATGGCTTTGTTaGATACTCTTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVFLWLC*ILFSEL
Trigger: GAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGAA...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGTTCCTATGGCTTTGTTaGATACTCTTCTCTGAACTC +
Preference number: 4 (lower is better)
Translates to: RTGRNLSLMLPNFCSRKMFLWLC*ILFSEL
Trigger: GAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGAA...CATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
3UTR CAA 72 bp GCTAAGTGTAAGCTAGCTAGATGTAGGCTAAAACTTTaGGGCAAATACATACTGGATTTTCAAGACATCACT +
Preference number: 4 (lower is better)
Translates to: AKCKLARCRLKL*GKYILDFQDIT
Trigger: AGTGATGTCTTGAAAATCCAGTATGTATTTGCCCAAAAGTTTTAGCCTACATCTAGCTAGCTTACACTTAGC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR TCA 90 bp CTTCTGTGTCAGCATCTTAGATACGTACTGTTTCTAGTTTATTGGAATCTTCCATTATGGACATCTGTTTaGATTCAAGGATTTGACCCA +
Preference number: 4 (lower is better)
Translates to: LLCQHLRYVLFLVYWNLPLWTSV*IQGFDP
Trigger: TGGGTCAAATCCTTGAATTCAAACAGATGTCCATAA...TGGAAGATTCCAATAAACTAGAAACAGTACGTATCTAAGATGCTGACACAGAAG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR GCA 90 bp AAAGTGAGAAAACATCTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATCAATTAGCACCCTTATaGAGGTGTTTTTCACAATCA +
Preference number: 4 (lower is better)
Translates to: KVRKHLTTPLSFIGHPLDQLAPL*RCFSQS
Trigger: TGATTGTGAAAAACACCTGCATAAGGGTGCTAATTG...ATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAGATGTTTTCTCACTTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 72 bp CCTGTATTACTATATGGCTACTCAATTGCCACTATATaGCTATCTGGTTACCCAACTGTTATAAATCAACAG +
Preference number: 4 (lower is better)
Translates to: PVLLYGYSIATI*LSGYPTVINQQ
Trigger: CTGTTGATTTATAACAGTTGGGTAACCAGATAGCAATATAGTGGCAATTGAGTAGCCATATAGTAATACAGG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
3UTR CAA 72 bp AGTACTGATTATGGACATCTGTTTGAATTCAAGGATTaGACCCAGAATAGAATTTTGACCCACTTCAGTGTT +
Preference number: 4 (lower is better)
Translates to: STDYGHLFEFKD*TQNRILTHFSV
Trigger: AACACTGAAGTGGGTCAAAATTCTATTCTGGGTCAAATCCTTGAATTCAAACAGATGTCCATAATCAGTACT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 90 bp GGGTGGCTCGGTTTATTGCCCCCGTGTGCCCGCGGCCGCCGCTGCTaGTGCTGCTCTTCCCCAGGTGGCGGCGGCAGCTGTAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: GWLGLLPPCARGRRC*CCSSPGGGGSCSGG
Trigger: GCCGCCGCTACAGCTGCCGCCGCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCGGCCGCGGGCACACGGGGGCAATAAACCGAGCCACCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 90 bp CCCGGGTGGCTCGGTTTATTGCCCCCGTGTGCCCGCGGCCGCCGCTaGTGCTGCTGCTCTTCCCCAGGTGGCGGCGGCAGCTGTAGCGGC +
Preference number: 5 (lower is better)
Translates to: PGWLGLLPPCARGRR*CCCSSPGGGGSCSG
Trigger: GCCGCTACAGCTGCCGCCGCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCGGCCGCGGGCACACGGGGGCAATAAACCGAGCCACCCGGG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 90 bp CGGGACTCTGCTCCTCCGGGCTCGCAGCGCCCTCGGCCATCTCCTTaGCTGAAGCCAGTGGGGTGGCTGGCGGCGCCCGGAACGGCAGCC +
Preference number: 5 (lower is better)
Translates to: RDSAPPGSQRPRPSP*LKPVGWLAAPGTAA
Trigger: GGCTGCCGTTCCGGGCGCCGCCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGGCGCTGCGAGCCCGGAGGAGCAGAGTCCCG
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CCA 90 bp GGCAGTGAGCGCAGAGAGGGTTCCCCGGCACGCTGGACGCCCGGGTaGCTCGGTTTATTGCCCCCGTGTGCCCGCGGCCGCCGCTGCTGC +
Preference number: 5 (lower is better)
Translates to: GSERREGSPARWTPG*LGLLPPCARGRRCC
Trigger: GCAGCAGCGGCGGCCGCGGGCACACGGGGGCAATAAACCGAGCCACCCGGGCGTCCAGCGTGCCGGGGAACCCTCTCTGCGCTCACTGCC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CCA 90 bp TGGGTCCCGCCGGGCAGTGAGCGCAGAGAGGGTTCCCCGGCACGCTaGACGCCCGGGTGGCTCGGTTTATTGCCCCCGTGTGCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: WVPPGSERREGSPAR*TPGWLGLLPPCARG
Trigger: GCCGCGGGCACACGGGGGCAATAAACCGAGCCACCCGGGCGTCCAGCGTGCCGGGGAACCCTCTCTGCGCTCACTGCCCGGCGGGACCCA
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS TCA 90 bp GGCCAGGGACATGGCTCAGCACATGGCGTGGGTCCCGCCGGGCAGTaGGCGCAGAGAGGGTTCCCCGGCACGCTGGACGCCCGGGTGGCT +
Preference number: 5 (lower is better)
Translates to: GQGHGSAHGVGPAGQ*AQRGFPGTLDARVA
Trigger: AGCCACCCGGGCGTCCAGCGTGCCGGGGAACCCTCTCTGCGCTCACTGCCCGGCGGGACCCACGCCATGTGCTGAGCCATGTCCCTGGCC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS TCA 90 bp ACTCTGCTCCTCCGGGCTCGCAGCGCCCTCGGCCATCTCCTTGCCTaGAGCCAGTGGGGTGGCTGGCGGCGCCCGGAACGGCAGCCTGGG +
Preference number: 5 (lower is better)
Translates to: TLLLRARSALGHLLA*SQWGGWRRPERQPG
Trigger: CCCAGGCTGCCGTTCCGGGCGCCGCCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGGCGCTGCGAGCCCGGAGGAGCAGAGT
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 90 bp CCGGCAGGAGCTGCAACTGGAACGGAAAGTCGGGACGGCGGTAACTaGTGGGCGAGGGTCTGCTCCCGGGGCGCGACGACGCGCTCGGGG +
Preference number: 5 (lower is better)
Translates to: PAGAATGTESRDGGN*WARVCSRGATTRSG
Trigger: CCCCGAGCGCGTCGTCGCGCCCCGGGAGCAGACCCTCGCCCAGCAGTTACCGCCGTCCCGACTTTCCGTTCCAGTTGCAGCTCCTGCCGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CCA 90 bp AGCCGGCGCACGAGTACAGGAACATATAGAGCCAGACGCAGAGCATaGCGAAGAGCAGCGCGAGCTTCCTCCTCACCGGCGGCGGGGGCG +
Preference number: 5 (lower is better)
Translates to: SRRTSTGTYRARRRA*RRAARASSSPAAGA
Trigger: CGCCCCCGCCGCCGGTGAGGAGGAAGCTCGCGCTGCTCTTCGCCATGCTCTGCGTCTGGCTCTATATGTTCCTGTACTCGTGCGCCGGCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp AGAACCCTAGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTAGCTGGAGATGGGGCTaGGGGAGTCCGGCACCTCGG +
Preference number: 5 (lower is better)
Translates to: RTLGLWLSGYIIGRDTTSSWRWG*GSPAPR
Trigger: CCGAGGTGCCGGACTCCCCAAGCCCCATCTCCAGCT...AGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTGCAAGGAGGCCTGCGGCAGCTGCTaGCTCCCAGACCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: RAVAFRLHHWTGHHICKEACGSC*LPDPLK
Trigger: TTTCAGTGGGTCTGGGAGCAAGCAGCTGCCGCAGGC...CTCCTTGCAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp GTAGACAGGGCAAGACCAGGTGAAGGACTTGGATACTGCCTTTTACTTCAAGCCCCCTCGGCCATCTCCTaGCCTGAAGCCAGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: VDRARPGEGLGYCLLLQAPSAIS*PEASGV
Trigger: CACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGG...GGCTTGAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTCTTGCCCTGTCTAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAGGGGCCAGGAGGACGTaGCACTCTCGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKAGARRT*HSRALA
Trigger: GGCCAGGGCGCGAGAGTGCAACGTCCTCCTGGCCCC...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp GAACTGTCTGCCTGGGGAACGCAGCATGGTGTAGTTTCATGCAAATTAAAGGAGCCCTCGGCCATCTCCTaGCCTGAAGCCAGTGGGGTG +
Preference number: 5 (lower is better)
Translates to: ELSAWGTQHGVVSCKLKEPSAIS*PEASGV
Trigger: CACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGG...CTCCTTTAATTTGCATGAAACTACACCATGCTGCGTTCCCCAGGCAGACAGTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp CTGGCTGGCTCTGTACCTAGCAGCACCTTGGTAGACGCTGATGCCGAGGGACACAGCCTACGGGATTCTTaGGTGTGTCAAAGCAGAACT +
Preference number: 5 (lower is better)
Translates to: LAGSVPSSTLVDADAEGHSLRDS*VCQSRT
Trigger: AGTTCTGCTTTGACACACCAAAGAATCCCGTAGGCT...GTGTCCCTCGGCATCAGCGTCTACCAAGGTGCTGCTAGGTACAGAGCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp CTGGCTGGCTCTGTACCTAGCAGCACCTTGGTAGACGCTGATGCCGAGGGACACTTAAGCCTGGTGGTCTaGCAGATTGCTAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: LAGSVPSSTLVDADAEGHLSLVV*QIARTG
Trigger: TCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA...GTGTCCCTCGGCATCAGCGTCTACCAAGGTGCTGCTAGGTACAGAGCCAGCCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCGGGGCCAGGAGGACGTaGCACTCTCGCGCCCTGGCC +
Preference number: 5 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTGARRT*HSRALA
Trigger: GGCCAGGGCGCGAGAGTGCAACGTCCTCCTGGCCCC...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp AGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACACGTGCCAGGACAAATTGCGCGGCTCTTGACATGTaGCCCGGCAGGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: RAFRVNRRKSKTRARTNCAALDM*PGRSCN
Trigger: GTTGCAGCTCCTGCCGGGCAACATGTCAAGAGCCGC...GCAATTTGTCCTGGCACGTGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp TTAAGCCTGGTGGTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGGGGTGGCTCGGTTTATaGCCCCCGTGTGCCCGCGGC +
Preference number: 5 (lower is better)
Translates to: LSLVVLQIARTGRNLSLMGWLGL*PPCARG
Trigger: GCCGCGGGCACACGGGGGCAATAAACCGAGCCACCC...CATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCAAGCTGGAGATGGGGCTaGGGGAGTCCGGCACCTCGG +
Preference number: 5 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKASWRWG*GSPAPR
Trigger: CCGAGGTGCCGGACTCCCCAAGCCCCATCTCCAGCT...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp GATGAGCTAGGAATTCCAAAGACGCATCAAGCTGAGGTGTCAGACTCCTTCCTCGTACCTAGCAGCACCTaGGTAGACGCTGATGCCGAG +
Preference number: 5 (lower is better)
Translates to: DELGIPKTHQAEVSDSFLVPSST*VDADAE
Trigger: CTCGGCATCAGCGTCTACCAAGGTGCTGCTAGGTAC...GAGGAAGGAGTCTGACACCTCAGCTTGATGCGTCTTTGGAATTCCTAGCTCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AGAACCCTAGGGCTGTGGCTTTCAGGCTACATCATTGGACGGGACACCACATCTACGTGCCAGGACAAATaGCCGAAACAGAAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: RTLGLWLSGYIIGRDTTSTCQDK*PKQKRG
Trigger: CCCCCTTTTCTGTTTCGGCAATTTGTCCTGGCACGT...AGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAAGCCACAGCCCTAGGGTTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAAGCGGCTCTTGACATGTaGCCCGGCAGGAGCTGCAAC +
Preference number: 5 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQAALDM*PGRSCN
Trigger: GTTGCAGCTCCTGCCGGGCAACATGTCAAGAGCCGC...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp CAAGCTCCGGCAGATGCTGCAACCAGATCTGTTAGGAACTTTAAACCATCAGACCAGAATACAGCCCTGTaGAGGCAGCTCAGCGTTCCT +
Preference number: 5 (lower is better)
Translates to: QAPADAATRSVRNFKPSDQNTAL*RQLSVP
Trigger: AGGAACGCTGAGCTGCCTCAACAGGGCTGTATTCTG...GTCTGATGGTTTAAAGTTCCTAACAGATCTGGTTGCAGCATCTGCCGGAGCTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp ACTTTAAACCATCAGACCCTTGCAGACCCTTATGAGGAGATGCACATGATGTTTCGACACCCAGCGCCCTaGGTTTGTGCTGGTGGCTCT +
Preference number: 5 (lower is better)
Translates to: TLNHQTLADPYEEMHMMFRHPAP*VCAGGS
Trigger: AGAGCCACCAGCACAAACCAAGGGCGCTGGGTGTCG...AAACATCATGTGCATCTCCTCATAAGGGTCTGCAAGGGTCTGATGGTTTAAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp GAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAGCTTAGTTCTTGCTGTTaGGCCACTGGCTACCACCCA +
Preference number: 5 (lower is better)
Translates to: ELFCSSTSTATSDHQNDQLSSCC*ATGYHP
Trigger: TGGGTGGTAGCCAGTGGCCAAACAGCAAGAACTAAG...CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp TGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACACGTGCCAGGACAAATaGCCGAAACAGAAAAGGGGG +
Preference number: 5 (lower is better)
Translates to: CILFSELFCSSTSTATSDTCQDK*PKQKRG
Trigger: CCCCCTTTTCTGTTTCGGCAATTTGTCCTGGCACGT...GTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCGCCTGCGGCAGCTGCTaGCTCCCAGACCCACTGAAA +
Preference number: 5 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFACGSC*LPDPLK
Trigger: TTTCAGTGGGTCTGGGAGCAAGCAGCTGCCGCAGGC...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp GAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAGTTTCAGGCTACATCATaGGACGGGACACCACATCTG +
Preference number: 5 (lower is better)
Translates to: ELFCSSTSTATSDHQNDQFQATS*DGTPHL
Trigger: CAGATGTGGTGTCCCGTCCAATGATGTAGCCTGAAA...CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AGCACCCAGGCATCTCACACATGTGACCTGGGAAAGACGGGGCAACAATCTACAGAAATGGATAAAACATaGGAGAACAGGGAGAAACCT +
Preference number: 5 (lower is better)
Translates to: STQASHTCDLGKTGQQSTEMDKT*ENREKP
Trigger: AGGTTTCTCCCTGTTCTCCAATGTTTTATCCATTTC...TGTAGATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AGCACCCAGGCATCTCACACATGTGACCTGGGAAAGACGGGGCAACAATCTACATATATGGCTACTCAATaGCCACTATATTGCTATCTG +
Preference number: 5 (lower is better)
Translates to: STQASHTCDLGKTGQQSTYMATQ*PLYCYL
Trigger: CAGATAGCAATATAGTGGCAATTGAGTAGCCATATA...TGTAGATTGTTGCCCCGTCTTTCCCAGGTCACATGTGTGAGATGCCTGGGTGCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp GAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGAATGATCAGGACCAGGTGAAGGACTaGGATACTGCCTTTTACTTC +
Preference number: 5 (lower is better)
Translates to: ELFCSSTSTATSDHQNDQDQVKD*DTAFYF
Trigger: GAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTC...CTGATCATTCTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp CTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACAGCCACATCAGACCATCAGACCCAGAATAGAATTTaGACCCACTTCAGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: LFSELFCSSTSTATSDHQTQNRI*THFSVR
Trigger: ACGAACACTGAAGTGGGTCAAAATTCTATTCTGGGT...CTGATGGTCTGATGTGGCTGTTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp ACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGCAGCAGGAAGATGACCTTAAGCCTGGTGGTCTaGCAGATTGCTAGAACAGGA +
Preference number: 5 (lower is better)
Translates to: TGRNLSLMLPNFCSRKMTLSLVV*QIARTG
Trigger: TCCTGTTCTAGCAATCTGCAAGACCACCAGGCTTAA...GGTCATCTTCCTGCTGCAGAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp TCCTATGGCTTTGTTGCATACTCTTCTCTGAACTCTTCTGCAGTTCCACATCAACTACACAATGATGGTTaGGCTGCTAAGTGTAAGCTA +
Preference number: 5 (lower is better)
Translates to: SYGFVAYSSLNSSAVPHQLHNDG*AAKCKL
Trigger: TAGCTTACACTTAGCAGCCAAACCATCATTGTGTAG...TTGATGTGGAACTGCAGAAGAGTTCAGAGAAGAGTATGCAACAAAGCCATAGGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp CAGGTACCACCTACTAAGTTAACAGACTACTGTTCAAACACCGCAAAGAAAGCATCAATTGCCACTATATaGCTATCTGGTTACCCAACT +
Preference number: 5 (lower is better)
Translates to: QVPPTKLTDYCSNTAKKASIATI*LSGYPT
Trigger: AGTTGGGTAACCAGATAGCAATATAGTGGCAATTGA...TGCTTTCTTTGCGGTGTTTGAACAGTAGTCTGTTAACTTAGTAGGTGGTACCTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACTGGTGGTCTTGCAGATaGCTAGAACAGGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHWWSCR*LEQEEI
Trigger: GATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCA...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp CTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACGTCATTTTGAGGCCTTaGTCTTTTCTCCCTATTGAG +
Preference number: 5 (lower is better)
Translates to: LTTPLSFIGHPLDKLKSHVILRP*SFLPIE
Trigger: CTCAATAGGGAGAAAAGACAAAGGCCTCAAAATGAC...GTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AAAGTGAGAAAACATCTAACCACACCTTTAAGTTTTATTGGCCATCCTCTTGATGACCAGGTGAAGGACTaGGATACTGCCTTTTACTTC +
Preference number: 5 (lower is better)
Translates to: KVRKHLTTPLSFIGHPLDDQVKD*DTAFYF
Trigger: GAAGTAAAAGGCAGTATCCAAGTCCTTCACCTGGTC...ATCAAGAGGATGGCCAATAAAACTTAAAGGTGTGGTTAGATGTTTTCTCACTTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AGTACTCCAATGAATATCAGAGCTTTTCGTGTAAATCGGAGGAAGTCCAAAACAACCCAGAATAGAATTTaGACCCACTTCAGTGTTCGT +
Preference number: 5 (lower is better)
Translates to: STPMNIRAFRVNRRKSKTTQNRI*THFSVR
Trigger: ACGAACACTGAAGTGGGTCAAAATTCTATTCTGGGT...TGTTTTGGACTTCCTCCGATTTACACGAAAAGCTCTGATATTCATTGGAGTACT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp GTCTTGCAGATTGCTAGAACAGGAAGAAATCTAAGTCTTATGTTACCTAACTTCTGGTGGTCTTGCAGATaGCTAGAACAGGAAGAAATC +
Preference number: 5 (lower is better)
Translates to: VLQIARTGRNLSLMLPNFWWSCR*LEQEEI
Trigger: GATTTCTTCCTGTTCTAGCAATCTGCAAGACCACCA...GAAGTTAGGTAACATAAGACTTAGATTTCTTCCTGTTCTAGCAATCTGCAAGAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS-3UTR CAA 90 bp AGTTTTATTGGCCATCCTCTTGATAAGCTGAAAAGTCACATTAGCTTCTGTGTCCCCATCCCAACCATTTaGACAATATGTATATCTTCC +
Preference number: 5 (lower is better)
Translates to: SFIGHPLDKLKSHISFCVPIPTI*TICISS
Trigger: GGAAGATATACATATTGTCAAAATGGTTGGGATGGG...GACACAGAAGCTAATGTGACTTTTCAGCTTATCAAGAGGATGGCCAATAAAACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTTGTAGGCTAAAACTTTaGGGCAAATACATACTGGAT +
Preference number: 5 (lower is better)
Translates to: KQNLHNDGLAAKCKLARCCRLKL*GKYILD
Trigger: ATCCAGTATGTATTTGCCCAAAAGTTTTAGCCTACA...ACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS-3UTR CAA 90 bp AAACAGAACCTACACAATGATGGTTTGGCTGCTAAGTGTAAGCTAGCTAGATGTTTACCAGAATTTCACTaGCCTAGAAACATCTTTCTC +
Preference number: 5 (lower is better)
Translates to: KQNLHNDGLAAKCKLARCLPEFH*PRNIFL
Trigger: GAGAAAGATGTTTCTAGGCAAGTGAAATTCTGGTAA...ACATCTAGCTAGCTTACACTTAGCAGCCAAACCATCATTGTGTAGGTTCTGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000360954.3
CDS TCA 72 bp CTCCGGGCTCGCAGCGCCCTCGGCCATCTCCTTGCCTaGAGCCAGTGGGGTGGCTGGCGGCGCCCGGAACGG +
Preference number: 6 (lower is better)
Translates to: LRARSALGHLLA*SQWGGWRRPER
Trigger: CCGTTCCGGGCGCCGCCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGGCGCTGCGAGCCCGGAG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp GCTCCTCCGGGCTCGCAGCGCCCTCGGCCATCTCCTTaGCTGAAGCCAGTGGGGTGGCTGGCGGCGCCCGGA +
Preference number: 6 (lower is better)
Translates to: APPGSQRPRPSP*LKPVGWLAAPG
Trigger: TCCGGGCGCCGCCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGGCGCTGCGAGCCCGGAGGAGC
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CCA 72 bp CGCAGAGAGGGTTCCCCGGCACGCTGGACGCCCGGGTaGCTCGGTTTATTGCCCCCGTGTGCCCGCGGCCGC +
Preference number: 6 (lower is better)
Translates to: RREGSPARWTPG*LGLLPPCARGR
Trigger: GCGGCCGCGGGCACACGGGGGCAATAAACCGAGCCACCCGGGCGTCCAGCGTGCCGGGGAACCCTCTCTGCG
75% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CAA 72 bp TGCTCCTCCGGGCTCGCAGCGCCCTCGGCCATCTCCTaGCCTGAAGCCAGTGGGGTGGCTGGCGGCGCCCGG +
Preference number: 6 (lower is better)
Translates to: CSSGLAAPSAIS*PEASGVAGGAR
Trigger: CCGGGCGCCGCCAGCCACCCCACTGGCTTCAGGCAAGGAGATGGCCGAGGGCGCTGCGAGCCCGGAGGAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp GAAAGTCGGGACGGCGGTAACTGCTGGGCGAGGGTCTaGTCCCGGGGCGCGACGACGCGCTCGGGGCCAGGA +
Preference number: 6 (lower is better)
Translates to: ESRDGGNCWARV*SRGATTRSGPG
Trigger: TCCTGGCCCCGAGCGCGTCGTCGCGCCCCGGGAGCAGACCCTCGCCCAGCAGTTACCGCCGTCCCGACTTTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp CTCGGTTTATTGCCCCCGTGTGCCCGCGGCCGCCGCTaGTGCTGCTGCTCTTCCCCAGGTGGCGGCGGCAGC +
Preference number: 6 (lower is better)
Translates to: LGLLPPCARGRR*CCCSSPGGGGS
Trigger: GCTGCCGCCGCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCGGCCGCGGGCACACGGGGGCAATAAACCGAG
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS TCA 72 bp CATGGCTCAGCACATGGCGTGGGTCCCGCCGGGCAGTaGGCGCAGAGAGGGTTCCCCGGCACGCTGGACGCC +
Preference number: 6 (lower is better)
Translates to: HGSAHGVGPAGQ*AQRGFPGTLDA
Trigger: GGCGTCCAGCGTGCCGGGGAACCCTCTCTGCGCTCACTGCCCGGCGGGACCCACGCCATGTGCTGAGCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp GGTTTATTGCCCCCGTGTGCCCGCGGCCGCCGCTGCTaGTGCTGCTCTTCCCCAGGTGGCGGCGGCAGCTGT +
Preference number: 6 (lower is better)
Translates to: GLLPPCARGRRC*CCSSPGGGGSC
Trigger: ACAGCTGCCGCCGCCACCTGGGGAAGAGCAGCAGCAGCAGCGGCGGCCGCGGGCACACGGGGGCAATAAACC
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp GAGATGGGGCTTGGGGAGTCCGGCACCTCGGGACTCTaGTCCTCCGGGCTCGCAGCGCCCTCGGCCATCTCC +
Preference number: 6 (lower is better)
Translates to: EMGLGESGTSGL*SSGLAAPSAIS
Trigger: GGAGATGGCCGAGGGCGCTGCGAGCCCGGAGGAGCAGAGTCCCGAGGTGCCGGACTCCCCAAGCCCCATCTC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp GACGTTGCACTCTCGCGCCCTGGCCACTCTAGACTGTaGGCACCGCCGCACGCCGGGGCTGCCTCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: DVALSRPGHSRL*APPHAGAASLQ
Trigger: CTGCAAGGAGGCAGCCCCGGCGTGCGGCGGTGCGCACAGTCTAGAGTGGCCAGGGCGCGAGAGTGCAACGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CCA 72 bp CCGGGCAGTGAGCGCAGAGAGGGTTCCCCGGCACGCTaGACGCCCGGGTGGCTCGGTTTATTGCCCCCGTGT +
Preference number: 6 (lower is better)
Translates to: PGSERREGSPAR*TPGWLGLLPPC
Trigger: ACACGGGGGCAATAAACCGAGCCACCCGGGCGTCCAGCGTGCCGGGGAACCCTCTCTGCGCTCACTGCCCGG
71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS GCA 72 bp GCTGCAACTGGAACGGAAAGTCGGGACGGCGGTAACTaGTGGGCGAGGGTCTGCTCCCGGGGCGCGACGACG +
Preference number: 6 (lower is better)
Translates to: AATGTESRDGGN*WARVCSRGATT
Trigger: CGTCGTCGCGCCCCGGGAGCAGACCCTCGCCCAGCAGTTACCGCCGTCCCGACTTTCCGTTCCAGTTGCAGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5
CDS CCA 72 bp ACGAGTACAGGAACATATAGAGCCAGACGCAGAGCATaGCGAAGAGCAGCGCGAGCTTCCTCCTCACCGGCG +
Preference number: 6 (lower is better)
Translates to: TSTGTYRARRRA*RRAARASSSPA
Trigger: CGCCGGTGAGGAGGAAGCTCGCGCTGCTCTTCGCCATGCTCTGCGTCTGGCTCTATATGTTCCTGTACTCGT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000360954.3
ENST00000466596.5