RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS3ST2 (Homo sapiens)

Ensembl gene IDs: ENSG00000122254

Ensembl transcript IDs: ENST00000261374.4, ENST00000473392.1

Found 276 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GGAAGTACTGCAGCCAGCTCTCCAGGTGCAGCACGTACATGCCGATaGGGATGGCGTTCCATGACACGTCCACCAGGCCCAGGGTGCGGT +
Preference number: 1 (lower is better)
Translates to: GSTAASSPGAARTCR*GWRSMTRPPGPGCG
Trigger: ACCGCACCCTGGGCCTGGTGGACGTGTCATGGAACGCCATCCGCATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCTGCAGTACTTCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 90 bp CTAGCGGGAAGTACTGCAGCCAGCTCTCCAGGTGCAGCACGTACATaGCGATGCGGATGGCGTTCCATGACACGTCCACCAGGCCCAGGG +
Preference number: 1 (lower is better)
Translates to: LAGSTAASSPGAART*RCGWRSMTRPPGPG
Trigger: CCCTGGGCCTGGTGGACGTGTCATGGAACGCCATCCGCATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCTGCAGTACTTCCCGCTAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTaGAGCCAGGGTTTGTTGGAGGGAGATCAGAGGGTCTGGGAGCAA +
Preference number: 1 (lower is better)
Translates to: ASWFQDDATQVGKGG*SQGLLEGDQRVWEQ
Trigger: TTGCTCCCAGACCCTCTGATCTCCCTCCAACAAACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CCA 90 bp CTAGTGGCAGGGACTCTCTGGTCTCTTGGCTTTAGCTGGGCTTCCTaGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGC +
Preference number: 1 (lower is better)
Translates to: LVAGTLWSLGFSWAS*FQDDATQVGKGGWS
Trigger: GCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCACTAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR TCA 90 bp GGGTCTGGGAGCAAATCTCACGGAAGAGATGAGCAGAAGAGCCCTTaGGAGCCCTTTCCTTTCGTGGGCTTATTCCCACCTGAAGTCCTG +
Preference number: 1 (lower is better)
Translates to: GSGSKSHGRDEQKSP*EPFPFVGLFPPEVL
Trigger: CAGGACTTCAGGTGGGAATAAGCCCACGAAAGGAAAGGGCTCTCAAGGGCTCTTCTGCTCATCTCTTCCGTGAGATTTGCTCCCAGACCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR TCA 90 bp TTGGAGGGAGATCAGAGGGTCTGGGAGCAAATCTCACGGAAGAGATaGGCAGAAGAGCCCTTGAGAGCCCTTTCCTTTCGTGGGCTTATT +
Preference number: 1 (lower is better)
Translates to: LEGDQRVWEQISRKR*AEEPLRALSFRGLI
Trigger: AATAAGCCCACGAAAGGAAAGGGCTCTCAAGGGCTCTTCTGCTCATCTCTTCCGTGAGATTTGCTCCCAGACCCTCTGATCTCCCTCCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CCA 90 bp GAGGGAAGATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTaGACAATGACAGGGACCGACTGCTGTGTTCATAGCAACAGAACC +
Preference number: 1 (lower is better)
Translates to: EGRYMPLGINKATPG*TMTGTDCCVHSNRT
Trigger: GGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTCCCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR TCA 90 bp GATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATaGCAGGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCG +
Preference number: 1 (lower is better)
Translates to: DTCHLELTRPLLGGQ*QGPTAVFIATEPSS
Trigger: CGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR GCA 90 bp GGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCGACTaGTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTAT +
Preference number: 1 (lower is better)
Translates to: GINKATPGWTMTGTD*CVHSNRTIIAYNIY
Trigger: ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR GCA 90 bp CCCTCTGACCTTCTTCTCCAGCTATACGTGCTCCTGGGTCATTGCTaGTGCTTCCATGAATTTAATTATCATCCACAGTTTAGCAAGACA +
Preference number: 1 (lower is better)
Translates to: PSDLLLQLYVLLGHC*CFHEFNYHPQFSKT
Trigger: TGTCTTGCTAAACTGTGGATGATAATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAAGAAGGTCAGAGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 90 bp AGACCCTCTGACCTTCTTCTCCAGCTATACGTGCTCCTGGGTCATTaGTGCTGCTTCCATGAATTTAATTATCATCCACAGTTTAGCAAG +
Preference number: 1 (lower is better)
Translates to: RPSDLLLQLYVLLGH*CCFHEFNYHPQFSK
Trigger: CTTGCTAAACTGTGGATGATAATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAAGAAGGTCAGAGGGTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CCA 90 bp AAGTCACTGGTTTATTTCATCACCAAAGGGTCTGTCTCCCAGGAGTaGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCAATGAATTGATA +
Preference number: 1 (lower is better)
Translates to: KSLVYFITKGSVSQE*PEVLSALQSLNELI
Trigger: TATCAATTCATTGAGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGATGAAATAAACCAGTGACTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR TCA 90 bp TTCTTAAAGCAATTCTCCAAGGCCCTTTATGGGCAGAAAGGAGAATaGTTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGC +
Preference number: 1 (lower is better)
Translates to: FLKQFSKALYGQKGE*FWNLLDVPGADQLC
Trigger: GCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCTCCTTTCTGCCCATAAAGGGCCTTGGAGAATTGCTTTAAGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR GCA 90 bp TCTGACCTTCTTCTCCAGCTATACGTGCTCCTGGGTCATTGCTGCTaGTTCCATGAATTTAATTATCATCCACAGTTTAGCAAGACACAC +
Preference number: 1 (lower is better)
Translates to: SDLLLQLYVLLGHCC*FHEFNYHPQFSKTH
Trigger: GTGTGTCTTGCTAAACTGTGGATGATAATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAAGAAGGTCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 90 bp CATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTaGTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCA +
Preference number: 1 (lower is better)
Translates to: HESSYEQSTRNSRIM*FCPQGAGRITKLFS
Trigger: TGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CCA 90 bp ATTGGAACATTCACTCTTCTTAAAGCAATTCTCCAAGGCCCTTTATaGGCAGAAAGGAGAATGATTCTGGAATTTACTGGACGTGCCAGG +
Preference number: 1 (lower is better)
Translates to: IGTFTLLKAILQGPL*AERRMILEFTGRAR
Trigger: CCTGGCACGTCCAGTAAATTCCAGAATCATTCTCCTTTCTGCCCATAAAGGGCCTTGGAGAATTGCTTTAAGAAGAGTGAATGTTCCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCCACCAGGCCCAGGGTaGGGTTGCGGAAGGAGAGGC +
Preference number: 2 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISPPGPG*GCGRRG
Trigger: GCCTCTCCTTCCGCAACCGCACCCTGGGCCTGGTGG...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR GCA 90 bp GGCCCAGGGTGCGGTTGCGGAAGGAGAGGCCCTCAAAGGTCGGGATGTCGGGCTGTGCTCCTGGGTCATTaGTGCTGCTTCCATGAATTT +
Preference number: 2 (lower is better)
Translates to: GPGCGCGRRGPQRSGCRAVLLGH*CCFHEF
Trigger: AAATTCATGGAAGCAGCAGCAATGACCCAGGAGCAC...AGCCCGACATCCCGACCTTTGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CCA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTTTCTCCAGCGTGATCTaGCTCTCGAGGGTCCTGGGC +
Preference number: 2 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISFSSVI*LSRVLG
Trigger: GCCCAGGACCCTCGAGAGCCAGATCACGCTGGAGAA...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR TCA 90 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCGCGTCTTCTCCAGCGTaGTCTGGCTCTCGAGGGTCC +
Preference number: 2 (lower is better)
Translates to: YMPLGINKATPGWTMTGTASSPA*SGSRGS
Trigger: GGACCCTCGAGAGCCAGATCACGCTGGAGAAGACGC...GGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR TCA 90 bp CTAGTGGCAGGGACTCTCTGGTCTCTTGGCTTTAGCTGGGCTTCCTGGTTCCAAGAGCAGAAGAGCCCTTaGGAGCCCTTTCCTTTCGTG +
Preference number: 2 (lower is better)
Translates to: LVAGTLWSLGFSWASWFQEQKSP*EPFPFV
Trigger: CACGAAAGGAAAGGGCTCTCAAGGGCTCTTCTGCTC...TTGGAACCAGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCACTAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp ACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTGGAGATCAGAGGGTCTaGGAGCAAATCTCACGGAAG +
Preference number: 2 (lower is better)
Translates to: TKGSVSQEWPEVLSALQSGDQRV*EQISRK
Trigger: CTTCCGTGAGATTTGCTCCCAGACCCTCTGATCTCC...AGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCGTTGGGAAAGGGGGCTaGAGCCAGGGTTTGTTGGAG +
Preference number: 2 (lower is better)
Translates to: YMPLGINKATPGWTMTGTVGKGG*SQGLLE
Trigger: CTCCAACAAACCCTGGCTCCAGCCCCCTTTCCCAAC...GGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCAAGGCCACTCCTGGGTaGACAATGACAGGGACCGAC +
Preference number: 2 (lower is better)
Translates to: YMPLGINKATPGWTMTGTKATPG*TMTGTD
Trigger: GTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTT...GGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp AAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCATGACAGGGACCGACTaGTGTGTTCATAGCAACAGA +
Preference number: 2 (lower is better)
Translates to: KGSVSQEWPEVLSALQSLMTGTD*CVHSNR
Trigger: TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCAT...GAGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR TCA 90 bp CATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAACTCCTGGGTGGACAATaGCAGGGACCGACTGCTGTG +
Preference number: 2 (lower is better)
Translates to: HCMLNMKARMSKVPVTAELLGGQ*QGPTAV
Trigger: CACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAG...TTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTTTTAGCTGGGCTTCCTaGTTCCAAGATGATGCAACT +
Preference number: 2 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISFSWAS*FQDDAT
Trigger: AGTTGCATCATCTTGGAACCAGGAAGCCCAGCTAAA...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR TCA 90 bp TTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGTTTTTCTCCTGGGTGGACAATaGCAGGGACCGACTGCTGTG +
Preference number: 2 (lower is better)
Translates to: LSTGSRENHKVVFRDSVFLLGGQ*QGPTAV
Trigger: CACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAG...AAAAACACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCGGTGCAGCACGTACATaGCGATGCGGATGGCGTTCC +
Preference number: 2 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTGAART*RCGWRS
Trigger: GGAACGCCATCCGCATCGGCATGTACGTGCTGCACC...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CCA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGGAGCCAGGGTTTGTTaGAGGGAGATCAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDGARVC*REIRGS
Trigger: AGACCCTCTGATCTCCCTCCAACAAACCCTGGCTCC...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp AGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAAAGCCAGCTCTCCAGGTaGAGCACGTACATGCCGATG +
Preference number: 2 (lower is better)
Translates to: RMILEFTGRARSRSTLLESQLSR*STYMPM
Trigger: CATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCT...TTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CCA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGGGAGATCAGAGGGTCTaGGAGCAAATCTCACGGAAG +
Preference number: 2 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLGDQRV*EQISRK
Trigger: CTTCCGTGAGATTTGCTCCCAGACCCTCTGATCTCC...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp CATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAAGGAGCCAGGGTTTGTTaGAGGGAGATCAGAGGGTCT +
Preference number: 2 (lower is better)
Translates to: HCMLNMKARMSKVPVTAEGARVC*REIRGS
Trigger: AGACCCTCTGATCTCCCTCCAACAAACCCTGGCTCC...TTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCCTCCAAGGCCCTTTATaGGCAGAAAGGAGAATGATT +
Preference number: 2 (lower is better)
Translates to: YMPLGINKATPGWTMTGTLQGPL*AERRMI
Trigger: AATCATTCTCCTTTCTGCCCATAAAGGGCCTTGGAG...GGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp CATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAAACATGCCGATGCGGATaGCGTTCCATGACACGTCCA +
Preference number: 2 (lower is better)
Translates to: HCMLNMKARMSKVPVTAETCRCG*RSMTRP
Trigger: TGGACGTGTCATGGAACGCCATCCGCATCGGCATGT...TTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR TCA 90 bp CTATCACTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCGAGCAGAAGAGCCCTTaGGAGCCCTTTCCTTTCGTG +
Preference number: 2 (lower is better)
Translates to: LSLQDQSVHEFSLLICPSEQKSP*EPFPFV
Trigger: CACGAAAGGAAAGGGCTCTCAAGGGCTCTTCTGCTC...GCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAGTGATAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CCA 90 bp GGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATGTGGCAGGGACTCTCTaGTCTCTTGGCTTTAGCTGG +
Preference number: 2 (lower is better)
Translates to: GTDCCVHSNRTIIAYNIYVAGTL*SLGFSW
Trigger: CCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCAC...ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCGTGGCAGGGACTCTCTaGTCTCTTGGCTTTAGCTGG +
Preference number: 2 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTVAGTL*SLGFSW
Trigger: CCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCAC...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp ATTTATTTCACATGGACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGGGCTCTCGAGGGTCCTaGGCATCAGGCTCCTGTAGT +
Preference number: 2 (lower is better)
Translates to: IYFTWTSMIPLHAEHESSGSRGS*ASGSCS
Trigger: ACTACAGGAGCCTGATGCCCAGGACCCTCGAGAGCC...CGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR TCA 90 bp CAGGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTCAGAGTGAGACCCTCTaGCCTTCTTCTCCAGCTATA +
Preference number: 2 (lower is better)
Translates to: QGPTAVFIATEPSSLIISQSETL*PSSPAI
Trigger: TATAGCTGGAGAAGAAGGTCAGAGGGTCTCACTCTG...AGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR GCA 90 bp CAGGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTTTCTCCAGCTATACGTaGTCCTGGGTCATTGCTGCT +
Preference number: 2 (lower is better)
Translates to: QGPTAVFIATEPSSLIISFSSYT*SWVIAA
Trigger: AGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAA...AGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR TCA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGTTCCTGGTTCCAAGATaGTGCAACTCAAGTTGGGAA +
Preference number: 2 (lower is better)
Translates to: MSKVPVTAELCAFVHREQFLVPR*CNSSWE
Trigger: TTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAA...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR TCA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGGGGCAGAAAGGAGAATaGTTCTGGAATTTACTGGAC +
Preference number: 2 (lower is better)
Translates to: MSKVPVTAELCAFVHREQGQKGE*FWNLLD
Trigger: GTCCAGTAAATTCCAGAATCATTCTCCTTTCTGCCC...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGTTTAGCTGGGCTTCCTaGTTCCAAGATGATGCAACT +
Preference number: 2 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLFSWAS*FQDDAT
Trigger: AGTTGCATCATCTTGGAACCAGGAAGCCCAGCTAAA...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp TTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGTTTTTATGACAGGGACCGACTaGTGTGTTCATAGCAACAGA +
Preference number: 2 (lower is better)
Translates to: LSTGSRENHKVVFRDSVFMTGTD*CVHSNR
Trigger: TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCAT...AAAAACACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CCA 90 bp CATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAACTCCAAGGCCCTTTATaGGCAGAAAGGAGAATGATT +
Preference number: 2 (lower is better)
Translates to: HCMLNMKARMSKVPVTAELQGPL*AERRMI
Trigger: AATCATTCTCCTTTCTGCCCATAAAGGGCCTTGGAG...TTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR TCA 90 bp CCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATGAGTTCTCCCTTTTaGTTTGCCCAAGCATCGAGG +
Preference number: 2 (lower is better)
Translates to: PTAVFIATEPSSLIISIIMSSPF*FAQASR
Trigger: CCTCGATGCTTGGGCAAATCAAAAGGGAGAACTCAT...GATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR GCA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGCTCCTGGGTCATTGCTaGTGCTTCCATGAATTTAAT +
Preference number: 2 (lower is better)
Translates to: STVETIGSEVTGLFHHQRLLGHC*CFHEFN
Trigger: ATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAG...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CAA 90 bp ACACGAGAGAGCCATATTTATTTCACATGGACAAGCATGATTCCATaGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAAC +
Preference number: 2 (lower is better)
Translates to: TRESHIYFTWTSMIP*HAEHESSYEQSTRN
Trigger: GTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAATATGGCTCTCTCGTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
3UTR-3UTR GCA 90 bp CCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATCATCGGAATTTACTGGACGTaGCAGGAGCAGATCAACTTT +
Preference number: 2 (lower is better)
Translates to: PTAVFIATEPSSLIISIIGIYWT*QEQINF
Trigger: AAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCC...GATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR TCA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGGGCAGAAAGGAGAATaGTTCTGGAATTTACTGGAC +
Preference number: 2 (lower is better)
Translates to: NMKARMSKVPVTAELCAFGQKGE*FWNLLD
Trigger: GTCCAGTAAATTCCAGAATCATTCTCCTTTCTGCCC...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp TGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATGGAATTTACTGGACGTaGCAGGAGCAGATCAACTTT +
Preference number: 2 (lower is better)
Translates to: CFSSTVETIGSEVTGLFHGIYWT*QEQINF
Trigger: AAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCC...ATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR GCA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGCTGGGTCATTGCTGCTaGTTCCATGAATTTAATTAT +
Preference number: 2 (lower is better)
Translates to: STVETIGSEVTGLFHHQRLGHCC*FHEFNY
Trigger: ATAATTAAATTCATGGAAGCAGCAGCAATGACCCAG...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR GCA 90 bp ATTTATTTCACATGGACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGAACAGCAGAATTATGTaGTTTTGTCCACAGGGAGCA +
Preference number: 2 (lower is better)
Translates to: IYFTWTSMIPLHAEHESSNSRIM*FCPQGA
Trigger: TGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTT...CGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR GCA 72 bp GGATGGCGTTCCATGACACGTCCACCAGGCCCAGGGTaGGGTTGCGGAAGGAGAGGCCCTCAAAGGTCGGGA +
Preference number: 3 (lower is better)
Translates to: GWRSMTRPPGPG*GCGRRGPQRSG
Trigger: TCCCGACCTTTGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCCTGGTGGACGTGTCATGGAACGCCATCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 72 bp GCAGCCAGCTCTCCAGGTGCAGCACGTACATGCCGATaGGGATGGCGTTCCATGACACGTCCACCAGGCCCA +
Preference number: 3 (lower is better)
Translates to: AASSPGAARTCR*GWRSMTRPPGP
Trigger: TGGGCCTGGTGGACGTGTCATGGAACGCCATCCGCATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCTGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 72 bp AGTACTGCAGCCAGCTCTCCAGGTGCAGCACGTACATaGCGATGCGGATGGCGTTCCATGACACGTCCACCA +
Preference number: 3 (lower is better)
Translates to: STAASSPGAART*RCGWRSMTRPP
Trigger: TGGTGGACGTGTCATGGAACGCCATCCGCATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCTGCAGTACT
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CCA 72 bp TTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTaGAGCCAGGGTTTGTTGGAGGGAGATCAGAGGGTC +
Preference number: 3 (lower is better)
Translates to: FQDDATQVGKGG*SQGLLEGDQRV
Trigger: GACCCTCTGATCTCCCTCCAACAAACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CCA 72 bp GGGACTCTCTGGTCTCTTGGCTTTAGCTGGGCTTCCTaGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGG +
Preference number: 3 (lower is better)
Translates to: GTLWSLGFSWAS*FQDDATQVGKG
Trigger: CCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp GACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCGGACTCTCTGGTCTCTaGGCTTTAGCTGGGCTTCCT +
Preference number: 3 (lower is better)
Translates to: DVPGADQLCLNRLMKTSGGLSGL*ALAGLP
Trigger: AGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCC...GCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CCA 72 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTaGACAATGACAGGGACCGACTGCTGTGTTCATAGC +
Preference number: 3 (lower is better)
Translates to: YMPLGINKATPG*TMTGTDCCVHS
Trigger: GCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATATGATGCAACTCAAGTaGGGAAAGGGGGCTGGAGCC +
Preference number: 3 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDMMQLK*GKGAGA
Trigger: GGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCAT...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTGAGGTGCTTTCAGCTTaGCAATCTCTCAATGAATTG +
Preference number: 3 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISEVLSA*QSLNEL
Trigger: CAATTCATTGAGAGATTGCAAAGCTGAAAGCACCTC...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR TCA 72 bp CACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATaGCAGGGACCGACTGCTGTGTTCATAGCAACAGAA +
Preference number: 3 (lower is better)
Translates to: HLELTRPLLGGQ*QGPTAVFIATE
Trigger: TTCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGGTGTCTCGGGACATGTaGAAGATGCGTCGAGGAGCC +
Preference number: 3 (lower is better)
Translates to: ELCAFVHREQGESQSCFQVSRDM*KMRRGA
Trigger: GGCTCCTCGACGCATCTTCAACATGTCCCGAGACAC...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR TCA 72 bp GTCTCCCATCCCACCACCCAGAGCATCTTGAAGAAATaGAGCTCAGAGGGAAGATACATGCCACTTGGAATT +
Preference number: 3 (lower is better)
Translates to: VSHPTTQSILKK*SSEGRYMPLGI
Trigger: AATTCCAAGTGGCATGTATCTTCCCTCTGAGCTTCATTTCTTCAAGATGCTCTGGGTGGTGGGATGGGAGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR TCA 72 bp CACTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTaGTTTGCCCAAGCATCGAGGCAGGAGGCTCGATTC +
Preference number: 3 (lower is better)
Translates to: HFRINLYMSSPF*FAQASRQEARF
Trigger: GAATCGAGCCTCCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CAA 90 bp ATTTATTTCACATGGACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTGGAGCCAGGGTTTGTaGGAGGGAGATCAGAGGGTC +
Preference number: 3 (lower is better)
Translates to: IYFTWTSMIPLHAEHESSWSQGL*EGDQRV
Trigger: GACCCTCTGATCTCCCTCCAACAAACCCTGGCTCCA...CGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGCAGAATTATGTGCTTTaGTCCACAGGGAGCAGGGAG +
Preference number: 3 (lower is better)
Translates to: STVETIGSEVTGLFHHQRQNYVL*STGSRE
Trigger: CTCCCTGCTCCCTGTGGACAAAAGCACATAATTCTG...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp CATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAAGCAAGACACACATTCTaGTCTCCAGTCCAGGTAGCT +
Preference number: 3 (lower is better)
Translates to: HCMLNMKARMSKVPVTAEARHTF*SPVQVA
Trigger: AGCTACCTGGACTGGAGACAAGAATGTGTGTCTTGC...TTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CAA 90 bp AGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAAGTTCTCCCTTTTGATTaGCCCAAGCATCGAGGCAGG +
Preference number: 3 (lower is better)
Translates to: RMILEFTGRARSRSTLLEVLPFD*PKHRGR
Trigger: CCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAAC...TTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 72 bp CAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTaGCCAAGCATCGAGGCAGGAGGCTCGATTCTGTTT +
Preference number: 3 (lower is better)
Translates to: QDQSVHEFSLLI*PSIEAGGSILF
Trigger: AAACAGAATCGAGCCTCCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR-3UTR CAA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGGAAGATACATGCCACTaGGAATTAACAAGGCCACTC +
Preference number: 3 (lower is better)
Translates to: MSKVPVTAELCAFVHREQEDTCH*ELTRPL
Trigger: GAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTC...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR GCA 72 bp TCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTaGTTTTGTCCACAGGGAGCAGGGAGAATCACAAAG +
Preference number: 3 (lower is better)
Translates to: SYEQSTRNSRIM*FCPQGAGRITK
Trigger: CTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR GCA 72 bp GACCTTCTTCTCCAGCTATACGTGCTCCTGGGTCATTaGTGCTGCTTCCATGAATTTAATTATCATCCACAG +
Preference number: 3 (lower is better)
Translates to: DLLLQLYVLLGH*CCFHEFNYHPQ
Trigger: CTGTGGATGATAATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAAGAAGGTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 72 bp CTTCTCCAGCTATACGTGCTCCTGGGTCATTGCTGCTaGTTCCATGAATTTAATTATCATCCACAGTTTAGC +
Preference number: 3 (lower is better)
Translates to: LLQLYVLLGHCC*FHEFNYHPQFS
Trigger: GCTAAACTGTGGATGATAATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR GCA 72 bp CTTCTTCTCCAGCTATACGTGCTCCTGGGTCATTGCTaGTGCTTCCATGAATTTAATTATCATCCACAGTTT +
Preference number: 3 (lower is better)
Translates to: LLLQLYVLLGHC*CFHEFNYHPQF
Trigger: AAACTGTGGATGATAATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAAGAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR TCA 72 bp CACGAGAGAGCCATATTTATTTCACATGGACAAGCATaGTTCCATTGCATGCTGAACATGAAAGCTCGTATG +
Preference number: 3 (lower is better)
Translates to: HERAIFISHGQA*FHCMLNMKARM
Trigger: CATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAATATGGCTCTCTCGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
3UTR-3UTR CAA 90 bp CAGTGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTGCAGATCAACTTTGCTaGAACAGACTGATGAAAACT +
Preference number: 3 (lower is better)
Translates to: QCFSSTVETIGSEVTGLFADQLC*NRLMKT
Trigger: AGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGC...AAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACACTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGAGGTGCTTTCAGCTTaGCAATCTCTCAATGAATTG +
Preference number: 3 (lower is better)
Translates to: NMKARMSKVPVTAELCAFEVLSA*QSLNEL
Trigger: CAATTCATTGAGAGATTGCAAAGCTGAAAGCACCTC...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp TGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATGCAGATCAACTTTGCTaGAACAGACTGATGAAAACT +
Preference number: 3 (lower is better)
Translates to: CFSSTVETIGSEVTGLFHADQLC*NRLMKT
Trigger: AGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGC...ATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR-3UTR CAA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACAGGAGCAGATCAACTTaGCTTGAACAGACTGATGAA +
Preference number: 3 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHRSRST*LEQTDE
Trigger: TTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCT...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
38% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GGCCCAGGGTGCGGTTGCGGAAGGAGAGGCCCTCAAAGGTCGGGATGTCGGGCTTTCTGGAGAAGTTTCTaGCCGCCCGCGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: GPGCGCGRRGPQRSGCRAFWRSF*PPALGP
Trigger: CGGCCCCAGCGCGGGCGGCCAGAAACTTCTCCAGAA...AGCCCGACATCCCGACCTTTGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CAA 72 bp GCGTTCCATGACACGTCCACCAGGCCCAGGGTGCGGTaGCGGAAGGAGAGGCCCTCAAAGGTCGGGATGTCG +
Preference number: 4 (lower is better)
Translates to: AFHDTSTRPRVR*RKERPSKVGMS
Trigger: CGACATCCCGACCTTTGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCCTGGTGGACGTGTCATGGAACGC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR GCA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCCAGGGTGCGCACAGTaGCAGGGGGTCCCGGGGGCA +
Preference number: 4 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISPGCAQ*QGVPGA
Trigger: TGCCCCCGGGACCCCCTGGCACTGTGCGCACCCTGG...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR GCA 90 bp GGCCCAGGGTGCGGTTGCGGAAGGAGAGGCCCTCAAAGGTCGGGATGTCGGGCTGCACGTACATGCCGATaGGGATGGCGTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: GPGCGCGRRGPQRSGCRAARTCR*GWRSMT
Trigger: TGTCATGGAACGCCATCCGCATCGGCATGTACGTGC...AGCCCGACATCCCGACCTTTGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CCA 90 bp ACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTACGCGGGTCGGGCGTTaGGGGCGCCGTCTTCTCCGG +
Preference number: 4 (lower is better)
Translates to: TKGSVSQEWPEVLSALQSTRVGR*GRRLLR
Trigger: CCGGAGAAGACGGCGCCCCCAACGCCCGACCCGCGT...AGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR CCA 90 bp GCCACTCCTGGGTGGACAATGACAGGGACCGACTGCTGTGTTCATAGCAACAGACCTAGAGGGCTCGCGTaGCGCTGCCACGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: ATPGWTMTGTDCCVHSNRPRGLA*RCHGHA
Trigger: CGCGTGGCCGTGGCAGCGCCACGCGAGCCCTCTAGG...TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGAGGCGAAGAGCAGCCTaGGCGCCCTCCGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: ASWFQDDATQVGKGGWSQRRRAA*APSAAE
Trigger: CTCAGCCGCGGAGGGCGCGCAGGCTGCTCTTCGCCT...CTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTTCCACCAGGCCCAGGGTaGGGTTGCGGAAGGAGAGGC +
Preference number: 4 (lower is better)
Translates to: PGSKMMQLKLGKGAGARVPPGPG*GCGRRG
Trigger: GCCTCTCCTTCCGCAACCGCACCCTGGGCCTGGTGG...AACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CTAGTGGCAGGGACTCTCTGGTCTCTTGGCTTTAGCTGGGCTTCCTGGTTCCAAGGACCCTATAGGCCATaGCTCCATGGGCCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: LVAGTLWSLGFSWASWFQGPYRP*LHGPAP
Trigger: CGGCGCGGGCCCATGGAGCCATGGCCTATAGGGTCC...TTGGAACCAGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCACTAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp ATCACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAACCGAAGCCCCATTCCTaGTCCTCGGAGCGCCGCTCA +
Preference number: 4 (lower is better)
Translates to: ITKGSVSQEWPEVLSALQPKPHS*SSERRS
Trigger: TGAGCGGCGCTCCGAGGATCAGGAATGGGGCTTCGG...TTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR GCA 90 bp TCAGAGGGTCTGGGAGCAAATCTCACGGAAGAGATGAGCAGAAGAGCCCTTGAGGAGCTGCTGTGGCCCTaGGGTCGCCTAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: SEGLGANLTEEMSRRALEELLWP*GRLEGS
Trigger: CGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTC...CTCAAGGGCTCTTCTGCTCATCTCTTCCGTGAGATTTGCTCCCAGACCCTCTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp GCCACTCCTGGGTGGACAATGACAGGGACCGACTGCTGTGTTCATAGCAACAGAAGAAGTGGGGTTCCGTaGCCAAGGCCCGCACGTCCG +
Preference number: 4 (lower is better)
Translates to: ATPGWTMTGTDCCVHSNRRSGVP*PRPARP
Trigger: CGGACGTGCGGGCCTTGGGCACGGAACCCCACTTCT...TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTACCCAGCTTGGGTaGGCCGGAGTGGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: ASWFQDDATQVGKGGWSQGTQLG*AGVVGT
Trigger: GGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACC...CTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTTCACGCCCACAATaGGGGCTTGGGGCAACCGCT +
Preference number: 4 (lower is better)
Translates to: HQRVCLPGVAGGAFSFAISSRPQ*GLGATA
Trigger: AGCGGTTGCCCCAAGCCCTCATTGTGGGCGTGAAGA...GATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp ATCACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAAGCGTCTTCTCCAGCGTaGTCTGGCTCTCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: ITKGSVSQEWPEVLSALQASSPA*SGSRGS
Trigger: GGACCCTCGAGAGCCAGATCACGCTGGAGAAGACGC...TTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp GCCACTCCTGGGTGGACAATGACAGGGACCGACTGCTGTGTTCATAGCAACAGAGCTAGCGGGAAGTACTaGAGCCAGCTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: ATPGWTMTGTDCCVHSNRASGKY*SQLSRC
Trigger: GCACCTGGAGAGCTGGCTGCAGTACTTCCCGCTAGC...TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCGCTTGGTACCCAGCTTaGGTGAGCCGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: KGSVSQEWPEVLSALQSLAWYPA*VSRSGW
Trigger: CCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGC...GAGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GCCACTCCTGGGTGGACAATGACAGGGACCGACTGCTGTGTTCATAGCAACAGAGCTTGGTACCCAGCTTaGGTGAGCCGGAGTGGTTGG +
Preference number: 4 (lower is better)
Translates to: ATPGWTMTGTDCCVHSNRAWYPA*VSRSGW
Trigger: CCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGC...TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCTTCTCCAGCGTGATCTaGCTCTCGAGGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: KGSVSQEWPEVLSALQSLFSSVI*LSRVLG
Trigger: GCCCAGGACCCTCGAGAGCCAGATCACGCTGGAGAA...GAGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp GACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCTTCTCCGGGGGCTGCTaGCCAGGGTGCGCACAGTGC +
Preference number: 4 (lower is better)
Translates to: DVPGADQLCLNRLMKTSGFSGGC*PGCAQC
Trigger: GCACTGTGCGCACCCTGGTCAGCAGCCCCCGGAGAA...GCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR TCA 90 bp CAGAGGGAAGATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAAGCGGATGGCGTTCCATaGCACGTCCACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: QREDTCHLELTRPLLGGQADGVP*HVHQAQ
Trigger: CTGGGCCTGGTGGACGTGTCATGGAACGCCATCCGC...TTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTCCCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCGGGCTTATTCCCACCTaGAGTCCTGCCCAACGGTTT +
Preference number: 4 (lower is better)
Translates to: HQRVCLPGVAGGAFSFAIGLIPT*SPAQRF
Trigger: AAACCGTTGGGCAGGACTTCAGGTGGGAATAAGCCC...GATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGCACCGGCGGCTGAGCTaGTGTGGCCCTGCGGTCGCC +
Preference number: 4 (lower is better)
Translates to: STVETIGSEVTGLFHHQRHRRLS*CGPAVA
Trigger: GGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTG...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCATCGAGCACCGGCGGCTGAGCTaGTGTGGCCCTGCGGTCGCC +
Preference number: 4 (lower is better)
Translates to: LQDQSVHEFSLLICPSIEHRRLS*CGPAVA
Trigger: GGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTG...CTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR GCA 90 bp CACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCGCACGTACATGCCGATaGGGATGGCGTTCCATGACA +
Preference number: 4 (lower is better)
Translates to: HQRVCLPGVAGGAFSFAIARTCR*GWRSMT
Trigger: TGTCATGGAACGCCATCCGCATCGGCATGTACGTGC...GATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CAGAGGGAAGATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAAGTGAGCCGGAGTGGTTaGAACCGGAGAGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: QREDTCHLELTRPLLGGQVSRSG*NRRGEG
Trigger: CCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCAC...TTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTCCCTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCGGAGCCAGGGTTTGTTaGAGGGAGATCAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: HQRVCLPGVAGGAFSFAIGARVC*REIRGS
Trigger: AGACCCTCTGATCTCCCTCCAACAAACCCTGGCTCC...GATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTTTGTCTCGGGACATGTTaGAGATGCGTCGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: PGSKMMQLKLGKGAGARVCLGTC*RCVEEP
Trigger: AGGCTCCTCGACGCATCTTCAACATGTCCCGAGACA...AACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGGCTTATTCCCACCTaGAGTCCTGCCCAACGGTTT +
Preference number: 4 (lower is better)
Translates to: ASWFQDDATQVGKGGWSQGLIPT*SPAQRF
Trigger: AAACCGTTGGGCAGGACTTCAGGTGGGAATAAGCCC...CTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGTCCCAGGCTCTTACGTaGGCCGGGTTCGGAGCGCGC +
Preference number: 4 (lower is better)
Translates to: MSKVPVTAELCAFVHREQSQALT*AGFGAR
Trigger: GCGCGCTCCGAACCCGGCGCACGTAAGAGCCTGGGA...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR CCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGCCTAGAGGGCTCGCGTaGCGCTGCCACGGCCACGCG +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQPRGLA*RCHGHA
Trigger: CGCGTGGCCGTGGCAGCGCCACGCGAGCCCTCTAGG...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCCGCGCCGGGGGTCATaGTTTCCGAGGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTPRRGS*FPRGHR
Trigger: CCGGTGCCCCCTCGGAAACCATGACCCCCGGCGCGG...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp TTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGTTTTTGAGCGCTGGGCTCGCTaGGCGTCGGCCCGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: LSTGSRENHKVVFRDSVFERWAR*ASARRD
Trigger: ATCCCTCCGGGCCGACGCCCAGCGAGCCCAGCGCTC...AAAAACACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCGTGAGCCGGAGTGGTTaGAACCGGAGAGGCGAGGGG +
Preference number: 4 (lower is better)
Translates to: DVPGADQLCLNRLMKTSGVSRSG*NRRGEG
Trigger: CCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCAC...GCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCCCCACAATGAGGGCTTaGGGCAACCGCTTGGTACCC +
Preference number: 4 (lower is better)
Translates to: YMPLGINKATPGWTMTGTPTMRA*GNRLVP
Trigger: GGGTACCAAGCGGTTGCCCCAAGCCCTCATTGTGGG...GGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGACATGCCGATGCGGATaGCGTTCCATGACACGTCCA +
Preference number: 4 (lower is better)
Translates to: ASWFQDDATQVGKGGWSQTCRCG*RSMTRP
Trigger: TGGACGTGTCATGGAACGCCATCCGCATCGGCATGT...CTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CAGAGGGAAGATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAAATGCCCAGGAAGTCCTaGACTCGCCCCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: QREDTCHLELTRPLLGGQMPRKS*TRPISP
Trigger: CGGCGAGATGGGGCGAGTCCAGGACTTCCTGGGCAT...TTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTCCCTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTGTGGCAGGGACTCTCTaGTCTCTTGGCTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISVAGTL*SLGFSW
Trigger: CCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCAC...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp TCAGAGGGTCTGGGAGCAAATCTCACGGAAGAGATGAGCAGAAGAGCCCTTGAGTGTCTCGGGACATGTTaGAGATGCGTCGAGGAGCCT +
Preference number: 4 (lower is better)
Translates to: SEGLGANLTEEMSRRALECLGTC*RCVEEP
Trigger: AGGCTCCTCGACGCATCTTCAACATGTCCCGAGACA...CTCAAGGGCTCTTCTGCTCATCTCTTCCGTGAGATTTGCTCCCAGACCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCATCGAGGAGCTGCTGTGGCCCTaGGGTCGCCTAGAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: LQDQSVHEFSLLICPSIEELLWP*GRLEGS
Trigger: CGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTC...CTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR GCA 90 bp CTATCACTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCAGGCGAAGAGCAGCCTaGGCGCCCTCCGCGGCTGAG +
Preference number: 4 (lower is better)
Translates to: LSLQDQSVHEFSLLICPSRRRAA*APSAAE
Trigger: CTCAGCCGCGGAGGGCGCGCAGGCTGCTCTTCGCCT...GCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAGTGATAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CCA 90 bp CCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTTGGAGATCAGAGGGTCTaGGAGCAAATCTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: PGSKMMQLKLGKGAGARVGDQRV*EQISRK
Trigger: CTTCCGTGAGATTTGCTCCCAGACCCTCTGATCTCC...AACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGAGATCAGAGGGTCTaGGAGCAAATCTCACGGAAG +
Preference number: 4 (lower is better)
Translates to: ASWFQDDATQVGKGGWSQGDQRV*EQISRK
Trigger: CTTCCGTGAGATTTGCTCCCAGACCCTCTGATCTCC...CTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp TCAGAGGGTCTGGGAGCAAATCTCACGGAAGAGATGAGCAGAAGAGCCCTTGAGGTGGCAGGGACTCTCTaGTCTCTTGGCTTTAGCTGG +
Preference number: 4 (lower is better)
Translates to: SEGLGANLTEEMSRRALEVAGTL*SLGFSW
Trigger: CCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCAC...CTCAAGGGCTCTTCTGCTCATCTCTTCCGTGAGATTTGCTCCCAGACCCTCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GCCACTCCTGGGTGGACAATGACAGGGACCGACTGCTGTGTTCATAGCAACAGAAGCTATACGTGCTCCTaGGTCATTGCTGCTGCTTCC +
Preference number: 4 (lower is better)
Translates to: ATPGWTMTGTDCCVHSNRSYTCS*VIAAAS
Trigger: GGAAGCAGCAGCAATGACCCAGGAGCACGTATAGCT...TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp GCTTCCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGCACACAGGTAGTGTCTaGGTCACCTGTACCAATCCA +
Preference number: 4 (lower is better)
Translates to: ASWFQDDATQVGKGGWSQHTGSV*VTCTNP
Trigger: TGGATTGGTACAGGTGACTCAGACACTACCTGTGTG...CTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCGCGGCTGAGCTGCTGTaGCCCTGCGGTCGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTAAELL*PCGRLE
Trigger: CTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGC...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTCCGCGCCGGGGGTCATaGTTTCCGAGGGGGCACCGG +
Preference number: 4 (lower is better)
Translates to: NMKARMSKVPVTAELCAFPRRGS*FPRGHR
Trigger: CCGGTGCCCCCTCGGAAACCATGACCCCCGGCGCGG...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCTTGGGTGAGCCGGAGTaGTTGGAACCGGAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: DVPGADQLCLNRLMKTSGLGEPE*LEPERR
Trigger: TCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAA...GCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCAGGGACTCTCTGGTCGGCTCTCGAGGGTCCTaGGCATCAGGCTCCTGTACC +
Preference number: 4 (lower is better)
Translates to: DQLCLNRLMKTSGRDSLVGSRGS*ASGSCT
Trigger: GGTACAGGAGCCTGATGCCCAGGACCCTCGAGAGCC...GACCAGAGAGTCCCTGCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR CCA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGATGCCCAGGAAGTCCTaGACTCGCCCCATCTCGCCG +
Preference number: 4 (lower is better)
Translates to: MSKVPVTAELCAFVHREQMPRKS*TRPISP
Trigger: CGGCGAGATGGGGCGAGTCCAGGACTTCCTGGGCAT...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTTATGAGTTCTCCCTTTTaGTTTGCCCAAGCATCGAGG +
Preference number: 4 (lower is better)
Translates to: PGSKMMQLKLGKGAGARVMSSPF*FAQASR
Trigger: CCTCGATGCTTGGGCAAATCAAAAGGGAGAACTCAT...AACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp ATCACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAAATGAGTTCTCCCTTTTaGTTTGCCCAAGCATCGAGG +
Preference number: 4 (lower is better)
Translates to: ITKGSVSQEWPEVLSALQMSSPF*FAQASR
Trigger: CCTCGATGCTTGGGCAAATCAAAAGGGAGAACTCAT...TTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGGGTGCAGCACGTACATaGCGATGCGGATGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLGAART*RCGWRS
Trigger: GGAACGCCATCCGCATCGGCATGTACGTGCTGCACC...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp TGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGGGTGCAGCACGTACATaGCGATGCGGATGGCGTTCC +
Preference number: 4 (lower is better)
Translates to: CFCPQGAGRITKLFSETVGAART*RCGWRS
Trigger: GGAACGCCATCCGCATCGGCATGTACGTGCTGCACC...CACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGCTAGCGGGAAGTACTaGAGCCAGCTCTCCAGGTGC +
Preference number: 4 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDASGKY*SQLSRC
Trigger: GCACCTGGAGAGCTGGCTGCAGTACTTCCCGCTAGC...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp ATCACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATTCTCCCTTTTGATTTaGCCAAGCATCGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: ITKGSVSQEWPEVLSALQFSLLI*PSIEAG
Trigger: TCCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAA...TTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATCATCGGACCCTATAGGCCATaGCTCCATGGGCCCGCGCCG +
Preference number: 4 (lower is better)
Translates to: PTAVFIATEPSSLIISIIGPYRP*LHGPAP
Trigger: CGGCGCGGGCCCATGGAGCCATGGCCTATAGGGTCC...GATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGTTCTGGAGAAGTTTCTaGCCGCCCGCGCTGGGGCCG +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQFWRSF*PPALGP
Trigger: CGGCCCCAGCGCGGGCGGCCAGAAACTTCTCCAGAA...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp TGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGCCCACAATGAGGGCTTaGGGCAACCGCTTGGTACCC +
Preference number: 4 (lower is better)
Translates to: CFCPQGAGRITKLFSETVPTMRA*GNRLVP
Trigger: GGGTACCAAGCGGTTGCCCCAAGCCCTCATTGTGGG...CACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CAGAGGGAAGATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAAGCGTGTAATCAGAGATaGCACGGGTCACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: QREDTCHLELTRPLLGGQACNQR*HGSQGS
Trigger: GGAACCCTGTGACCCGTGCCATCTCTGATTACACGC...TTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTCCCTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGGCTCTCGAGGGTCCTaGGCATCAGGCTCCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDGSRGS*ASGSCS
Trigger: ACTACAGGAGCCTGATGCCCAGGACCCTCGAGAGCC...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp CTATCACTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCGGTACCCAGCTTGGGTaGGCCGGAGTGGTTGGAACC +
Preference number: 4 (lower is better)
Translates to: LSLQDQSVHEFSLLICPSGTQLG*AGVVGT
Trigger: GGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACC...GCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAGTGATAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp GGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATGCGTCTTCTCCAGCGTaGTCTGGCTCTCGAGGGTCC +
Preference number: 4 (lower is better)
Translates to: GTDCCVHSNRTIIAYNIYASSPA*SGSRGS
Trigger: GGACCCTCGAGAGCCAGATCACGCTGGAGAAGACGC...ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGCGGCTGAGCTGCTGTaGCCCTGCGGTCGCCTAGAG +
Preference number: 4 (lower is better)
Translates to: NMKARMSKVPVTAELCAFAAELL*PCGRLE
Trigger: CTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGC...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACGAGCGCTGGGCTCGCTaGGCGTCGGCCCGGAGGGAT +
Preference number: 4 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHERWAR*ASARRD
Trigger: ATCCCTCCGGGCCGACGCCCAGCGAGCCCAGCGCTC...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AGGAGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTCTTGGGGCAACCGCTTaGTACCCAGCTTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: RRMILEFTGRARSRSTLLLGATA*YPAWVS
Trigger: GCTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAG...AAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGGTTGGGAAAGGGGGCTaGAGCCAGGGTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLVGKGG*SQGLLE
Trigger: CTCCAACAAACCCTGGCTCCAGCCCCCTTTCCCAAC...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp ATCACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATTTAGCTGGGCTTCCTaGTTCCAAGATGATGCAACT +
Preference number: 4 (lower is better)
Translates to: ITKGSVSQEWPEVLSALQFSWAS*FQDDAT
Trigger: AGTTGCATCATCTTGGAACCAGGAAGCCCAGCTAAA...TTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTTCTCCAAGGCCCTTTATaGGCAGAAAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: PGSKMMQLKLGKGAGARVLQGPL*AERRMI
Trigger: AATCATTCTCCTTTCTGCCCATAAAGGGCCTTGGAG...AACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp TGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGGAGCAGAAGAGCCCTTaGGAGCCCTTTCCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: CFCPQGAGRITKLFSETVEQKSP*EPFPFV
Trigger: CACGAAAGGAAAGGGCTCTCAAGGGCTCTTCTGCTC...CACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGCGGGGAACAGGCGGTTaGATTTCCAGCATCTCCCGG +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQRGTGG*ISSISR
Trigger: CCGGGAGATGCTGGAAATGCAACCGCCTGTTCCCCG...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR GCA 90 bp TACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAATGACAGGGACCATGACAGGGACCGACTaGTGTGTTCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: YMPLGINKATPGWTMTGTMTGTD*CVHSNR
Trigger: TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCAT...GGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp AAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTCAACAGCAGAATTATGTaGTTTTGTCCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: KGSVSQEWPEVLSALQSLNSRIM*FCPQGA
Trigger: TGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTT...GAGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATTTGGGTGAGCCGGAGTaGTTGGAACCGGAGAGGCGA +
Preference number: 4 (lower is better)
Translates to: GTDCCVHSNRTIIAYNIYLGEPE*LEPERR
Trigger: TCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAA...ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCTTGGGGCAACCGCTTaGTACCCAGCTTGGGTGAGC +
Preference number: 4 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTLGATA*YPAWVS
Trigger: GCTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAG...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp GATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCAGGGACTCTCTGGTCTTCCTGTCAAAGAAGTaGGGTTCCGTGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: DQLCLNRLMKTSGRDSLVFLSKK*GSVPKA
Trigger: GGCCTTGGGCACGGAACCCCACTTCTTTGACAGGAA...GACCAGAGAGTCCCTGCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGCCAGGGTTTGTTaGAGGGAGATCAGAGGGTCT +
Preference number: 4 (lower is better)
Translates to: MSKVPVTAELCAFVHREQGARVC*REIRGS
Trigger: AGACCCTCTGATCTCCCTCCAACAAACCCTGGCTCC...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AGGAGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGTTGGGAAAGGGGGCTaGAGCCAGGGTTTGTTGGAG +
Preference number: 4 (lower is better)
Translates to: RRMILEFTGRARSRSTLLVGKGG*SQGLLE
Trigger: CTCCAACAAACCCTGGCTCCAGCCCCCTTTCCCAAC...AAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCTCCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGAAGGCCACTCCTGGGTaGACAATGACAGGGACCGAC +
Preference number: 4 (lower is better)
Translates to: STVETIGSEVTGLFHHQRKATPG*TMTGTD
Trigger: GTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTT...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp AGGAGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAGGAGCCTCTTGAGTaGCAAAGTAGCTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: RRMILEFTGRARSRSTLLEEPLE*QSSWAS
Trigger: AGACGCCCAGCTACTTTGTCACTCAAGAGGCTCCTC...AAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATCATCTTCTCCAGCGTGATCTaGCTCTCGAGGGTCCTGGGC +
Preference number: 4 (lower is better)
Translates to: PTAVFIATEPSSLIISIIFSSVI*LSRVLG
Trigger: GCCCAGGACCCTCGAGAGCCAGATCACGCTGGAGAA...GATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAAGCGTGTAATCAGAGATaGCACGGGTCACAGGGTTCC +
Preference number: 4 (lower is better)
Translates to: HCMLNMKARMSKVPVTAEACNQR*HGSQGS
Trigger: GGAACCCTGTGACCCGTGCCATCTCTGATTACACGC...TTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACGCGGATGGCGTTCCATaGCACGTCCACCAGGCCCAG +
Preference number: 4 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHADGVP*HVHQAQ
Trigger: CTGGGCCTGGTGGACGTGTCATGGAACGCCATCCGC...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp AGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAAGAGCAGAAGAGCCCTTaGGAGCCCTTTCCTTTCGTG +
Preference number: 4 (lower is better)
Translates to: RMILEFTGRARSRSTLLEEQKSP*EPFPFV
Trigger: CACGAAAGGAAAGGGCTCTCAAGGGCTCTTCTGCTC...TTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp TGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCTCCTGGGTGGACAATaGCAGGGACCGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: CFSSTVETIGSEVTGLFHLLGGQ*QGPTAV
Trigger: CACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAG...ATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTCTCCTGGGTGGACAATaGCAGGGACCGACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: NMKARMSKVPVTAELCAFLLGGQ*QGPTAV
Trigger: CACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAG...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp TGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGCAGAGTGAGACCCTCTaGCCTTCTTCTCCAGCTATA +
Preference number: 4 (lower is better)
Translates to: CFCPQGAGRITKLFSETVQSETL*PSSPAI
Trigger: TATAGCTGGAGAAGAAGGTCAGAGGGTCTCACTCTG...CACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR GCA 90 bp CAGTGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTAGCCAGCTCTCCAGGTaGAGCACGTACATGCCGATG +
Preference number: 4 (lower is better)
Translates to: QCFSSTVETIGSEVTGLFSQLSR*STYMPM
Trigger: CATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCT...AAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACACTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CAGAGGGAAGATACATGCCACTTGGAATTAACAAGGCCACTCCTGGGTGGACAAGGAATTTACTGGACGTaGCAGGAGCAGATCAACTTT +
Preference number: 4 (lower is better)
Translates to: QREDTCHLELTRPLLGGQGIYWT*QEQINF
Trigger: AAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCC...TTGTCCACCCAGGAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTCCCTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGAGGAGTGGCCGGAGGTaGTTTCAGCTTTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: STVETIGSEVTGLFHHQRRSGRR*FQLCNL
Trigger: GAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCT...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp TTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGTTTTTTTCCTGTCAAAGAAGTaGGGTTCCGTGCCCAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSTGSRENHKVVFRDSVFFLSKK*GSVPKA
Trigger: GGCCTTGGGCACGGAACCCCACTTCTTTGACAGGAA...AAAAACACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAA
48% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTAGCCAGCTCTCCAGGTaGAGCACGTACATGCCGATG +
Preference number: 4 (lower is better)
Translates to: NMKARMSKVPVTAELCAFSQLSR*STYMPM
Trigger: CATCGGCATGTACGTGCTGCACCTGGAGAGCTGGCT...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATATGACAGGGACCGACTaGTGTGTTCATAGCAACAGA +
Preference number: 4 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDMTGTD*CVHSNR
Trigger: TCTGTTGCTATGAACACAGCAGTCGGTCCCTGTCAT...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGGAGTGGCCGGAGGTaGTTTCAGCTTTGCAATCTC +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQRSGRR*FQLCNL
Trigger: GAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCT...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CAGTGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTACATGCCGATGCGGATaGCGTTCCATGACACGTCCA +
Preference number: 4 (lower is better)
Translates to: QCFSSTVETIGSEVTGLFTCRCG*RSMTRP
Trigger: TGGACGTGTCATGGAACGCCATCCGCATCGGCATGT...AAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CAA 72 bp TCACTTCAGGATCAATCTGTACATGAGTTCTCCCTTTaGATTTGCCCAAGCATCGAGGCAGGAGGCTCGATT +
Preference number: 4 (lower is better)
Translates to: SLQDQSVHEFSL*ICPSIEAGGSI
Trigger: AATCGAGCCTCCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAGTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGTTCCTGGTTCCAAGATaGTGCAACTCAAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLFLVPR*CNSSWE
Trigger: TTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAA...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCATCGAGTTCTCCCTTTTGATTTaGCCAAGCATCGAGGCAGGA +
Preference number: 4 (lower is better)
Translates to: LQDQSVHEFSLLICPSIEFSLLI*PSIEAG
Trigger: TCCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAA...CTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR GCA 90 bp GATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCAGGGACTCTCTGGTCGGAATTTACTGGACGTaGCAGGAGCAGATCAACTTT +
Preference number: 4 (lower is better)
Translates to: DQLCLNRLMKTSGRDSLVGIYWT*QEQINF
Trigger: AAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCC...GACCAGAGAGTCCCTGCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CCA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATTTTAGCTGGGCTTCCTaGTTCCAAGATGATGCAACT +
Preference number: 4 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDFSWAS*FQDDAT
Trigger: AGTTGCATCATCTTGGAACCAGGAAGCCCAGCTAAA...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CAA 72 bp AATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTaGAACAGACTGATGAAAACTAGTGGCAGGGACTCT +
Preference number: 4 (lower is better)
Translates to: NLLDVPGADQLC*NRLMKTSGRDS
Trigger: AGAGTCCCTGCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCGTGCTCCTGGGTCATTaGTGCTGCTTCCATGAATTT +
Preference number: 4 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTVLLGH*CCFHEF
Trigger: AAATTCATGGAAGCAGCAGCAATGACCCAGGAGCAC...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CCA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACAAGGCCACTCCTGGGTaGACAATGACAGGGACCGAC +
Preference number: 4 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHKATPG*TMTGTD
Trigger: GTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTT...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACGAGGAGCCTCTTGAGTaGCAAAGTAGCTGGGCGTCT +
Preference number: 4 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHEEPLE*QSSWAS
Trigger: AGACGCCCAGCTACTTTGTCACTCAAGAGGCTCCTC...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGTTCCTGGTTCCAAGATaGTGCAACTCAAGTTGGGAA +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQFLVPR*CNSSWE
Trigger: TTCCCAACTTGAGTTGCATCATCTTGGAACCAGGAA...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGGGGCAGAAAGGAGAATaGTTCTGGAATTTACTGGAC +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQGQKGE*FWNLLD
Trigger: GTCCAGTAAATTCCAGAATCATTCTCCTTTCTGCCC...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGTCACATGGACAAGCATaGTTCCATTGCATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: ELCAFVHREQGESQSCFQSHGQA*FHCMLN
Trigger: GTTCAGCATGCAATGGAATCATGCTTGTCCATGTGA...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR TCA 90 bp CTATCACTTCAGGATCAATCTGTACATGAGTTCTCCCTTTTGATTTGCCCAAGCTCACATGGACAAGCATaGTTCCATTGCATGCTGAAC +
Preference number: 4 (lower is better)
Translates to: LSLQDQSVHEFSLLICPSSHGQA*FHCMLN
Trigger: GTTCAGCATGCAATGGAATCATGCTTGTCCATGTGA...GCTTGGGCAAATCAAAAGGGAGAACTCATGTACAGATTGATCCTGAAGTGATAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
3UTR CAA 72 bp TTAATTATCATCCACAGTTTAGCAAGACACACATTCTaGTCTCCAGTCCAGGTAGCTTCAGCACAATCACCC +
Preference number: 4 (lower is better)
Translates to: LIIIHSLARHTF*SPVQVASAQSP
Trigger: GGGTGATTGTGCTGAAGCTACCTGGACTGGAGACAAGAATGTGTGTCTTGCTAAACTGTGGATGATAATTAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp CAGGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTGGATCAATCTGTACATaGGTTCTCCCTTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: QGPTAVFIATEPSSLIISGSICT*VLPFDL
Trigger: CAAATCAAAAGGGAGAACTCATGTACAGATTGATCC...AGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp AGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAAAACAGCAGAATTATGTaGTTTTGTCCACAGGGAGCA +
Preference number: 4 (lower is better)
Translates to: RMILEFTGRARSRSTLLENSRIM*FCPQGA
Trigger: TGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTT...TTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCCTCCTGGGTCATTGCTaGTGCTTCCATGAATTTAAT +
Preference number: 4 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTLLGHC*CFHEFN
Trigger: ATTAAATTCATGGAAGCAGCAGCAATGACCCAGGAG...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp ATTTATTTCACATGGACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGGGGCAGAAAGGAGAATaGTTCTGGAATTTACTGGAC +
Preference number: 4 (lower is better)
Translates to: IYFTWTSMIPLHAEHESSGQKGE*FWNLLD
Trigger: GTCCAGTAAATTCCAGAATCATTCTCCTTTCTGCCC...CGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR GCA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACTTCTCCAGCTATACGTaGTCCTGGGTCATTGCTGCT +
Preference number: 4 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHFSSYT*SWVIAA
Trigger: AGCAGCAATGACCCAGGAGCACGTATAGCTGGAGAA...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CCA 90 bp TATACGGTCTATAAAATTCTCGGAGCTGGTCTATCACTTCAGGATCAATCTGTACTCCAAGGCCCTTTATaGGCAGAAAGGAGAATGATT +
Preference number: 4 (lower is better)
Translates to: YTVYKILGAGLSLQDQSVLQGPL*AERRMI
Trigger: AATCATTCTCCTTTCTGCCCATAAAGGGCCTTGGAG...TACAGATTGATCCTGAAGTGATAGACCAGCTCCGAGAATTTTATAGACCGTATA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR TCA 90 bp TGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATGGATCAATCTGTACATaGGTTCTCCCTTTTGATTTG +
Preference number: 4 (lower is better)
Translates to: CFSSTVETIGSEVTGLFHGSICT*VLPFDL
Trigger: CAAATCAAAAGGGAGAACTCATGTACAGATTGATCC...ATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
3UTR CAA 72 bp AGCCATATTTATTTCACATGGACAAGCATGATTCCATaGCATGCTGAACATGAAAGCTCGTATGAGCAAAGT +
Preference number: 4 (lower is better)
Translates to: SHIYFTWTSMIP*HAEHESSYEQS
Trigger: ACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAATATGGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR GCA 90 bp CATAGCAACAGAACCATCATCGCTTATAATATCTATCATCATTGGAACATTCACCTGGGTCATTGCTGCTaGTTCCATGAATTTAATTAT +
Preference number: 4 (lower is better)
Translates to: HSNRTIIAYNIYHHWNIHLGHCC*FHEFNY
Trigger: ATAATTAAATTCATGGAAGCAGCAGCAATGACCCAG...GTGAATGTTCCAATGATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS CCA 90 bp GAGCGCCGCTCACGAAACGCTCGGCGGCGGCGCGGCTGTGCGGGCTaGCGGGTGGACCGGACGGTGGCGCTGGCGCCGGCCGCGATCTGG +
Preference number: 5 (lower is better)
Translates to: ERRSRNARRRRGCAG*RVDRTVALAPAAIW
Trigger: CCAGATCGCGGCCGGCGCCAGCGCCACCGTCCGGTCCACCCGCCAGCCCGCACAGCCGCGCCGCCGCCGAGCGTTTCGTGAGCGGCGCTC
80% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 90 bp TGGAACCGGAGAGGCGAGGGGCGGGCACGGCGGCGGCGGGCGCGCTaGGAGCGCTGGGCTCGCTGGGCGTCGGCCCGGAGGGATCACAGG +
Preference number: 5 (lower is better)
Translates to: WNRRGEGRARRRRAR*ERWARWASARRDHR
Trigger: CCTGTGATCCCTCCGGGCCGACGCCCAGCGAGCCCAGCGCTCCCAGCGCGCCCGCCGCCGCCGTGCCCGCCCCTCGCCTCTCCGGTTCCA
80% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS GCA 90 bp GGGCTCCGGGCAGCCGGGCGGCTCGGGCGCTCCCAGGCTCTTACGTaGGCCGGGTTCGGAGCGCGCCCAGCGCCCGAAGCCCCATTCCTG +
Preference number: 5 (lower is better)
Translates to: GLRAAGRLGRSQALT*AGFGARPAPEAPFL
Trigger: CAGGAATGGGGCTTCGGGCGCTGGGCGCGCTCCGAACCCGGCGCACGTAAGAGCCTGGGAGCGCCCGAGCCGCCCGGCTGCCCGGAGCCC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 90 bp GCTCACGAAACGCTCGGCGGCGGCGCGGCTGTGCGGGCTGGCGGGTaGACCGGACGGTGGCGCTGGCGCCGGCCGCGATCTGGCTCTTCG +
Preference number: 5 (lower is better)
Translates to: AHETLGGGAAVRAGG*TGRWRWRRPRSGSS
Trigger: CGAAGAGCCAGATCGCGGCCGGCGCCAGCGCCACCGTCCGGTCCACCCGCCAGCCCGCACAGCCGCGCCGCCGCCGAGCGTTTCGTGAGC
78% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS TCA 90 bp CGTGCGCCGGGTTCGGAGCGCGCCCAGCGCCCGAAGCCCCATTCCTaGTCCTCGGAGCGCCGCTCACGAAACGCTCGGCGGCGGCGCGGC +
Preference number: 5 (lower is better)
Translates to: RAPGSERAQRPKPHS*SSERRSRNARRRRG
Trigger: GCCGCGCCGCCGCCGAGCGTTTCGTGAGCGGCGCTCCGAGGATCAGGAATGGGGCTTCGGGCGCTGGGCGCGCTCCGAACCCGGCGCACG
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS TCA 90 bp TGGGCCCGCGCCGGGGGTCATGGTTTCCGAGGGGGCACCGGCGGCTaGGCTGCTGTGGCCCTGCGGTCGCCTAGAGGGCTCGCGTGGCGC +
Preference number: 5 (lower is better)
Translates to: WARAGGHGFRGGTGG*AAVALRSPRGLAWR
Trigger: GCGCCACGCGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTGCCCCCTCGGAAACCATGACCCCCGGCGCGGGCCCA
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 90 bp CTAGAGGGCTCGCGTGGCGCTGCCACGGCCACGCGGGTCGGGCGTTaGGGGCGCCGTCTTCTCCGGGGGCTGCTGACCAGGGTGCGCACA +
Preference number: 5 (lower is better)
Translates to: LEGSRGAATATRVGR*GRRLLRGLLTRVRT
Trigger: TGTGCGCACCCTGGTCAGCAGCCCCCGGAGAAGACGGCGCCCCCAACGCCCGACCCGCGTGGCCGTGGCAGCGCCACGCGAGCCCTCTAG
76% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS GCA 90 bp GTCATGGTTTCCGAGGGGGCACCGGCGGCTGAGCTGCTGTGGCCCTaGGGTCGCCTAGAGGGCTCGCGTGGCGCTGCCACGGCCACGCGG +
Preference number: 5 (lower is better)
Translates to: VMVSEGAPAAELLWP*GRLEGSRGAATATR
Trigger: CCGCGTGGCCGTGGCAGCGCCACGCGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTGCCCCCTCGGAAACCATGAC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 90 bp GAGCGTGAAGGCGAAGAGCAGCCTGCGCGCCCTCCGCGGCTGAGGTaGCCCCGCGCGGCCCAGGACCCTATAGGCCATGGCTCCATGGGC +
Preference number: 5 (lower is better)
Translates to: EREGEEQPARPPRLR*PRAAQDPIGHGSMG
Trigger: GCCCATGGAGCCATGGCCTATAGGGTCCTGGGCCGCGCGGGGCCACCTCAGCCGCGGAGGGCGCGCAGGCTGCTCTTCGCCTTCACGCTC
73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 90 bp CAGGACCCTATAGGCCATGGCTCCATGGGCCCGCGCCGGGGGTCATaGTTTCCGAGGGGGCACCGGCGGCTGAGCTGCTGTGGCCCTGCG +
Preference number: 5 (lower is better)
Translates to: QDPIGHGSMGPRRGS*FPRGHRRLSCCGPA
Trigger: CGCAGGGCCACAGCAGCTCAGCCGCCGGTGCCCCCTCGGAAACCATGACCCCCGGCGCGGGCCCATGGAGCCATGGCCTATAGGGTCCTG
72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 90 bp GGGGAACAGGCGGTTGCATTTCCAGCATCTCCCGGTCCTAGGCGATaGGGCTCCGGGCAGCCGGGCGGCTCGGGCGCTCCCAGGCTCTTA +
Preference number: 5 (lower is better)
Translates to: GEQAVAFPASPGPRR*GSGQPGGSGAPRLL
Trigger: TAAGAGCCTGGGAGCGCCCGAGCCGCCCGGCTGCCCGGAGCCCCATCGCCTAGGACCGGGAGATGCTGGAAATGCAACCGCCTGTTCCCC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS TCA 90 bp GCCCACAATGAGGGCTTGGGGCAACCGCTTGGTACCCAGCTTGGGTaGGCCGGAGTGGTTGGAACCGGAGAGGCGAGGGGCGGGCACGGC +
Preference number: 5 (lower is better)
Translates to: AHNEGLGQPLGTQLG*AGVVGTGEARGGHG
Trigger: GCCGTGCCCGCCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAGCCCTCATTGTGGGC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS TCA 90 bp AGCACAGGAAGCTGTAACACAGGTAAGTGCAGGAGAGCGAGAGCGTaGAGGCGAAGAGCAGCCTGCGCGCCCTCCGCGGCTGAGGTGGCC +
Preference number: 5 (lower is better)
Translates to: STGSCNTGKCRRARA*RRRAACAPSAAEVA
Trigger: GGCCACCTCAGCCGCGGAGGGCGCGCAGGCTGCTCTTCGCCTTCACGCTCTCGCTCTCCTGCACTTACCTGTGTTACAGCTTCCTGTGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp AACAAGGCCACTCCTGGGTGGACAATGACAGGGACCGACTGCTGTGTTCATAGCCACGCGGGTCGGGCGTaGGGGGCGCCGTCTTCTCCG +
Preference number: 5 (lower is better)
Translates to: NKATPGWTMTGTDCCVHSHAGRA*GAPSSP
Trigger: CGGAGAAGACGGCGCCCCCAACGCCCGACCCGCGTG...GCTATGAACACAGCAGTCGGTCCCTGTCATTGTCCACCCAGGAGTGGCCTTGTT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR CAA 90 bp CAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCTGGTGAGCCGGAGTGGTaGGAACCGGAGAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: QRVCLPGVAGGAFSFAISGEPEW*EPERRG
Trigger: CCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACC...AGAGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CCTGGTTCCAAGATGATGCAACTCAAGTTGGGAAAGGGGGCTGGAGCCAGGGTTAGGCCCAGGGTGCGGTaGCGGAAGGAGAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: PGSKMMQLKLGKGAGARVRPRVR*RKERPS
Trigger: TGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCCT...AACCCTGGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCATCTTGGAACCAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CTAGTGGCAGGGACTCTCTGGTCTCTTGGCTTTAGCTGGGCTTCCTGGTTCCAAGCCCACAATGAGGGCTaGGGGCAACCGCTTGGTACC +
Preference number: 5 (lower is better)
Translates to: LVAGTLWSLGFSWASWFQAHNEG*GQPLGT
Trigger: GGTACCAAGCGGTTGCCCCAAGCCCTCATTGTGGGC...TTGGAACCAGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCACTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CTAGTGGCAGGGACTCTCTGGTCTCTTGGCTTTAGCTGGGCTTCCTGGTTCCAATCGGGGAACAGGCGGTaGCATTTCCAGCATCTCCCG +
Preference number: 5 (lower is better)
Translates to: LVAGTLWSLGFSWASWFQSGNRR*HFQHLP
Trigger: CGGGAGATGCTGGAAATGCAACCGCCTGTTCCCCGA...TTGGAACCAGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCCCTGCCACTAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS-3UTR CAA 90 bp ACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTGCGTCGAGGAGCCTCTaGAGTGACAAAGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: TKGSVSQEWPEVLSALQSASRSL*SDKVAG
Trigger: CCCAGCTACTTTGTCACTCAAGAGGCTCCTCGACGC...AGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ATCACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAAGTGTCTCGGGACATGTaGAAGATGCGTCGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: ITKGSVSQEWPEVLSALQVSRDM*KMRRGA
Trigger: GGCTCCTCGACGCATCTTCAACATGTCCCGAGACAC...TTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTGAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GGCCCAGGGTGCGGTTGCGGAAGGAGAGGCCCTCAAAGGTCGGGATGTCGGGCTGGGAGAATCACAAAGTaGTTTTCAGAGACAGTGTTT +
Preference number: 5 (lower is better)
Translates to: GPGCGCGRRGPQRSGCRAGRITK*FSETVF
Trigger: AAACACTGTCTCTGAAAACAACTTTGTGATTCTCCC...AGCCCGACATCCCGACCTTTGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CAA 90 bp ACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTGTTCTCCCTTTTGATTaGCCCAAGCATCGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: TKGSVSQEWPEVLSALQSVLPFD*PKHRGR
Trigger: CCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAAC...AGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGCGCTTGGTACCCAGCTaGGGTGAGCCGGAGTGGTTG +
Preference number: 5 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLRLVPS*GEPEWL
Trigger: CAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCG...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGGCTTGGGGCAACCGCTaGGTACCCAGCTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: MSKVPVTAELCAFVHREQAWGNR*VPSLGE
Trigger: CTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAGC...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGGCTTGGGGCAACCGCTaGGTACCCAGCTTGGGTGAG +
Preference number: 5 (lower is better)
Translates to: STVETIGSEVTGLFHHQRAWGNR*VPSLGE
Trigger: CTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAGC...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ATTTATTTCACATGGACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGGGTGAGCCGGAGTGGTaGGAACCGGAGAGGCGAGGG +
Preference number: 5 (lower is better)
Translates to: IYFTWTSMIPLHAEHESSGEPEW*EPERRG
Trigger: CCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACC...CGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGTCCATGTGAAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GAATTATGTGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGGCCCACAATGAGGGCTaGGGGCAACCGCTTGGTACC +
Preference number: 5 (lower is better)
Translates to: ELCAFVHREQGESQSCFQAHNEG*GQPLGT
Trigger: GGTACCAAGCGGTTGCCCCAAGCCCTCATTGTGGGC...CTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCACATAATTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TATACGGTCTATAAAATTCTCGGAGCTGGTCTATCACTTCAGGATCAATCTGTAAGGCCCAGGGTGCGGTaGCGGAAGGAGAGGCCCTCA +
Preference number: 5 (lower is better)
Translates to: YTVYKILGAGLSLQDQSVRPRVR*RKERPS
Trigger: TGAGGGCCTCTCCTTCCGCAACCGCACCCTGGGCCT...TACAGATTGATCCTGAAGTGATAGACCAGCTCCGAGAATTTTATAGACCGTATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CAA 90 bp TCAGAGGGTCTGGGAGCAAATCTCACGGAAGAGATGAGCAGAAGAGCCCTTGAGCATGAGTTCTCCCTTTaGATTTGCCCAAGCATCGAG +
Preference number: 5 (lower is better)
Translates to: SEGLGANLTEEMSRRALEHEFSL*ICPSIE
Trigger: CTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATG...CTCAAGGGCTCTTCTGCTCATCTCTTCCGTGAGATTTGCTCCCAGACCCTCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCAGGGACTCTCTGGTCTGGAGCCAGGGTTTGTaGGAGGGAGATCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: DQLCLNRLMKTSGRDSLVWSQGL*EGDQRV
Trigger: GACCCTCTGATCTCCCTCCAACAAACCCTGGCTCCA...GACCAGAGAGTCCCTGCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCTCAATCTCTCAATGAATaGATAAGGTCTGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: TKGSVSQEWPEVLSALQSQSLNE*IRSEEG
Trigger: GCCCTCCTCAGACCTTATCAATTCATTGAGAGATTG...AGATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCGAGGTGCTTTCAGCTTaGCAATCTCTCAATGAATTG +
Preference number: 5 (lower is better)
Translates to: HQRVCLPGVAGGAFSFAIEVLSA*QSLNEL
Trigger: CAATTCATTGAGAGATTGCAAAGCTGAAAGCACCTC...GATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTGTCCACAGGGAGCAGGGACTCTCTGGTCTCTaGGCTTTAGCTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: MSKVPVTAELCAFVHREQGLSGL*ALAGLP
Trigger: AGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCC...CTGCTCCCTGTGGACAAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGATGGACTCTCTGGTCTCTaGGCTTTAGCTGGGCTTCCT +
Preference number: 5 (lower is better)
Translates to: LEFTGRARSRSTLLEQTDGLSGL*ALAGLP
Trigger: AGGAAGCCCAGCTAAAGCCAAGAGACCAGAGAGTCC...ATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CACCAAAGGGTCTGTCTCCCAGGAGTGGCCGGAGGTGCTTTCAGCTTTGCAATCGCAGATCAACTTTGCTaGAACAGACTGATGAAAACT +
Preference number: 5 (lower is better)
Translates to: HQRVCLPGVAGGAFSFAIADQLC*NRLMKT
Trigger: AGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGC...GATTGCAAAGCTGAAAGCACCTCCGGCCACTCCTGGGAGACAGACCCTTTGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGTTTTTGCGTCGAGGAGCCTCTaGAGTGACAAAGTAGCTGGG +
Preference number: 5 (lower is better)
Translates to: LSTGSRENHKVVFRDSVFASRSL*SDKVAG
Trigger: CCCAGCTACTTTGTCACTCAAGAGGCTCCTCGACGC...AAAAACACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGTTTTTGTGTCTCGGGACATGTaGAAGATGCGTCGAGGAGCC +
Preference number: 5 (lower is better)
Translates to: LSTGSRENHKVVFRDSVFVSRDM*KMRRGA
Trigger: GGCTCCTCGACGCATCTTCAACATGTCCCGAGACAC...AAAAACACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGGTTCTCCCTTTTGATTaGCCCAAGCATCGAGGCAGG +
Preference number: 5 (lower is better)
Translates to: CFCPQGAGRITKLFSETVVLPFD*PKHRGR
Trigger: CCTGCCTCGATGCTTGGGCAAATCAAAAGGGAGAAC...CACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCTGGAGCCAGGGTTTGTaGGAGGGAGATCAGAGGGTC +
Preference number: 5 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTWSQGL*EGDQRV
Trigger: GACCCTCTGATCTCCCTCCAACAAACCCTGGCTCCA...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATATGATGCAACTCAAGTaGGGAAAGGGGGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: GTDCCVHSNRTIIAYNIYMMQLK*GKGAGA
Trigger: GGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCAT...ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp AGAATGATTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAAATGATGCAACTCAAGTaGGGAAAGGGGGCTGGAGCC +
Preference number: 5 (lower is better)
Translates to: RMILEFTGRARSRSTLLEMMQLK*GKGAGA
Trigger: GGCTCCAGCCCCCTTTCCCAACTTGAGTTGCATCAT...TTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAATCATTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TTCTGGAATTTACTGGACGTGCCAGGAGCAGATCAACTTTGCTTGAACAGACTGCAGAATTATGTGCTTTaGTCCACAGGGAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: FWNLLDVPGADQLCLNRLQNYVL*STGSRE
Trigger: CTCCCTGCTCCCTGTGGACAAAAGCACATAATTCTG...CAGTCTGTTCAAGCAAAGTTGATCTGCTCCTGGCACGTCCAGTAAATTCCAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGGCAAGACACACATTCTaGTCTCCAGTCCAGGTAGCT +
Preference number: 5 (lower is better)
Translates to: STVETIGSEVTGLFHHQRARHTF*SPVQVA
Trigger: AGCTACCTGGACTGGAGACAAGAATGTGTGTCTTGC...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000473392.1
CDS-3UTR CAA 90 bp AGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATCACCAAAGGCATGAGTTCTCCCTTTaGATTTGCCCAAGCATCGAG +
Preference number: 5 (lower is better)
Translates to: STVETIGSEVTGLFHHQRHEFSL*ICPSIE
Trigger: CTCGATGCTTGGGCAAATCAAAAGGGAGAACTCATG...CCTTTGGTGATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TGCTTTTGTCCACAGGGAGCAGGGAGAATCACAAAGTTGTTTTCAGAGACAGTGGAAGATACATGCCACTaGGAATTAACAAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: CFCPQGAGRITKLFSETVEDTCH*ELTRPL
Trigger: GAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTC...CACTGTCTCTGAAAACAACTTTGTGATTCTCCCTGCTCCCTGTGGACAAAAGCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CAGGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTCAATCTCTCAATGAATaGATAAGGTCTGAGGAGGGC +
Preference number: 5 (lower is better)
Translates to: QGPTAVFIATEPSSLIISQSLNE*IRSEEG
Trigger: GCCCTCCTCAGACCTTATCAATTCATTGAGAGATTG...AGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCCTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GATCAACTTTGCTTGAACAGACTGATGAAAACTAGTGGCAGGGACTCTCTGGTCACAAGCATGATTCCATaGCATGCTGAACATGAAAGC +
Preference number: 5 (lower is better)
Translates to: DQLCLNRLMKTSGRDSLVTSMIP*HAEHES
Trigger: GCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT...GACCAGAGAGTCCCTGCCACTAGTTTTCATCAGTCTGTTCAAGCAAAGTTGATC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATGAAGATACATGCCACTaGGAATTAACAAGGCCACTC +
Preference number: 5 (lower is better)
Translates to: GTDCCVHSNRTIIAYNIYEDTCH*ELTRPL
Trigger: GAGTGGCCTTGTTAATTCCAAGTGGCATGTATCTTC...ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp AACATGAAAGCTCGTATGAGCAAAGTACCCGTAACAGCAGAATTATGTGCTTTTCAGAATTATGTGCTTTaGTCCACAGGGAGCAGGGAG +
Preference number: 5 (lower is better)
Translates to: NMKARMSKVPVTAELCAFQNYVL*STGSRE
Trigger: CTCCCTGCTCCCTGTGGACAAAAGCACATAATTCTG...AAAAGCACATAATTCTGCTGTTACGGGTACTTTGCTCATACGAGCTTTCATGTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp GGGACCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATAGGAGCAGATCAACTTaGCTTGAACAGACTGATGAA +
Preference number: 5 (lower is better)
Translates to: GTDCCVHSNRTIIAYNIYRSRST*LEQTDE
Trigger: TTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCT...ATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGGTCCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCAGGAGCAGATCAACTTaGCTTGAACAGACTGATGAA +
Preference number: 5 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTRSRST*LEQTDE
Trigger: TTCATCAGTCTGTTCAAGCAAAGTTGATCTGCTCCT...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCGAGGTGCTTTCAGCTTaGCAATCTCTCAATGAATTG +
Preference number: 5 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTEVLSA*QSLNEL
Trigger: CAATTCATTGAGAGATTGCAAAGCTGAAAGCACCTC...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp ACAAGCATGATTCCATTGCATGCTGAACATGAAAGCTCGTATGAGCAAAGTACCACAAGCATGATTCCATaGCATGCTGAACATGAAAGC +
Preference number: 5 (lower is better)
Translates to: TSMIPLHAEHESSYEQSTTSMIP*HAEHES
Trigger: GCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT...GGTACTTTGCTCATACGAGCTTTCATGTTCAGCATGCAATGGAATCATGCTTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp CCGACTGCTGTGTTCATAGCAACAGAACCATCATCGCTTATAATATCTATCATCGCAGATCAACTTTGCTaGAACAGACTGATGAAAACT +
Preference number: 5 (lower is better)
Translates to: PTAVFIATEPSSLIISIIADQLC*NRLMKT
Trigger: AGTTTTCATCAGTCTGTTCAAGCAAAGTTGATCTGC...GATGATAGATATTATAAGCGATGATGGTTCTGTTGCTATGAACACAGCAGTCGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS-3UTR CAA 90 bp TGTTTTTCAAGCACAGTTGAGACCATAGGCTCTGAAGTCACTGGTTTATTTCATGGGAGAATCACAAAGTaGTTTTCAGAGACAGTGTTT +
Preference number: 5 (lower is better)
Translates to: CFSSTVETIGSEVTGLFHGRITK*FSETVF
Trigger: AAACACTGTCTCTGAAAACAACTTTGTGATTCTCCC...ATGAAATAAACCAGTGACTTCAGAGCCTATGGTCTCAACTGTGCTTGAAAAACA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS GCA 72 bp GCAGCCGGGCGGCTCGGGCGCTCCCAGGCTCTTACGTaGGCCGGGTTCGGAGCGCGCCCAGCGCCCGAAGCC +
Preference number: 6 (lower is better)
Translates to: AAGRLGRSQALT*AGFGARPAPEA
Trigger: GGCTTCGGGCGCTGGGCGCGCTCCGAACCCGGCGCACGTAAGAGCCTGGGAGCGCCCGAGCCGCCCGGCTGC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 72 bp GGCGCGGCTGTGCGGGCTGGCGGGTGGACCGGACGGTaGCGCTGGCGCCGGCCGCGATCTGGCTCTTCGGGA +
Preference number: 6 (lower is better)
Translates to: GAAVRAGGWTGR*RWRRPRSGSSG
Trigger: TCCCGAAGAGCCAGATCGCGGCCGGCGCCAGCGCCACCGTCCGGTCCACCCGCCAGCCCGCACAGCCGCGCC
79% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 72 bp TCGCGTGGCGCTGCCACGGCCACGCGGGTCGGGCGTTaGGGGCGCCGTCTTCTCCGGGGGCTGCTGACCAGG +
Preference number: 6 (lower is better)
Translates to: SRGAATATRVGR*GRRLLRGLLTR
Trigger: CCTGGTCAGCAGCCCCCGGAGAAGACGGCGCCCCCAACGCCCGACCCGCGTGGCCGTGGCAGCGCCACGCGA
78% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 72 bp GCTGCTGTGGCCCTGCGGTCGCCTAGAGGGCTCGCGTaGCGCTGCCACGGCCACGCGGGTCGGGCGTTGGGG +
Preference number: 6 (lower is better)
Translates to: AAVALRSPRGLA*RCHGHAGRALG
Trigger: CCCCAACGCCCGACCCGCGTGGCCGTGGCAGCGCCACGCGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CAA 72 bp CTCGCGTGGCGCTGCCACGGCCACGCGGGTCGGGCGTaGGGGGCGCCGTCTTCTCCGGGGGCTGCTGACCAG +
Preference number: 6 (lower is better)
Translates to: LAWRCHGHAGRA*GAPSSPGAADQ
Trigger: CTGGTCAGCAGCCCCCGGAGAAGACGGCGCCCCCAACGCCCGACCCGCGTGGCCGTGGCAGCGCCACGCGAG
78% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CAA 90 bp CCTAGAGGGCTCGCGTGGCGCTGCCACGGCCACGCGGGTCGGGCGTaGGGGGCGCCGTCTTCTCCGGGGGCTGCTGACCAGGGTGCGCAC +
Preference number: 6 (lower is better)
Translates to: PRGLAWRCHGHAGRA*GAPSSPGAADQGAH
Trigger: GTGCGCACCCTGGTCAGCAGCCCCCGGAGAAGACGGCGCCCCCAACGCCCGACCCGCGTGGCCGTGGCAGCGCCACGCGAGCCCTCTAGG
77% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS GCA 72 bp TCCGAGGGGGCACCGGCGGCTGAGCTGCTGTGGCCCTaGGGTCGCCTAGAGGGCTCGCGTGGCGCTGCCACG +
Preference number: 6 (lower is better)
Translates to: SEGAPAAELLWP*GRLEGSRGAAT
Trigger: CGTGGCAGCGCCACGCGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTGCCCCCTCGGA
76% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 72 bp GCTGTGCGGGCTGGCGGGTGGACCGGACGGTGGCGCTaGCGCCGGCCGCGATCTGGCTCTTCGGGAAATGCC +
Preference number: 6 (lower is better)
Translates to: AVRAGGWTGRWR*RRPRSGSSGNA
Trigger: GGCATTTCCCGAAGAGCCAGATCGCGGCCGGCGCCAGCGCCACCGTCCGGTCCACCCGCCAGCCCGCACAGC
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS TCA 72 bp GCCGGGGGTCATGGTTTCCGAGGGGGCACCGGCGGCTaGGCTGCTGTGGCCCTGCGGTCGCCTAGAGGGCTC +
Preference number: 6 (lower is better)
Translates to: AGGHGFRGGTGG*AAVALRSPRGL
Trigger: GAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTGCCCCCTCGGAAACCATGACCCCCGGC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 72 bp GCGGTTGCATTTCCAGCATCTCCCGGTCCTAGGCGATaGGGCTCCGGGCAGCCGGGCGGCTCGGGCGCTCCC +
Preference number: 6 (lower is better)
Translates to: AVAFPASPGPRR*GSGQPGGSGAP
Trigger: GGGAGCGCCCGAGCCGCCCGGCTGCCCGGAGCCCCATCGCCTAGGACCGGGAGATGCTGGAAATGCAACCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 72 bp GAGGTGGCCCCGCGCGGCCCAGGACCCTATAGGCCATaGCTCCATGGGCCCGCGCCGGGGGTCATGGTTTCC +
Preference number: 6 (lower is better)
Translates to: EVAPRGPGPYRP*LHGPAPGVMVS
Trigger: GGAAACCATGACCCCCGGCGCGGGCCCATGGAGCCATGGCCTATAGGGTCCTGGGCCGCGCGGGGCCACCTC
74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS TCA 72 bp GGTTCGGAGCGCGCCCAGCGCCCGAAGCCCCATTCCTaGTCCTCGGAGCGCCGCTCACGAAACGCTCGGCGG +
Preference number: 6 (lower is better)
Translates to: GSERAQRPKPHS*SSERRSRNARR
Trigger: CCGCCGAGCGTTTCGTGAGCGGCGCTCCGAGGATCAGGAATGGGGCTTCGGGCGCTGGGCGCGCTCCGAACC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000261374.4
CDS CCA 72 bp ATGGTTTCCGAGGGGGCACCGGCGGCTGAGCTGCTGTaGCCCTGCGGTCGCCTAGAGGGCTCGCGTGGCGCT +
Preference number: 6 (lower is better)
Translates to: MVSEGAPAAELL*PCGRLEGSRGA
Trigger: AGCGCCACGCGAGCCCTCTAGGCGACCGCAGGGCCACAGCAGCTCAGCCGCCGGTGCCCCCTCGGAAACCAT
72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 72 bp ACCGCTTGGTACCCAGCTTGGGTGAGCCGGAGTGGTTaGAACCGGAGAGGCGAGGGGCGGGCACGGCGGCGG +
Preference number: 6 (lower is better)
Translates to: TAWYPAWVSRSG*NRRGEGRARRR
Trigger: CCGCCGCCGTGCCCGCCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCGGT
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 72 bp ATAGGCCATGGCTCCATGGGCCCGCGCCGGGGGTCATaGTTTCCGAGGGGGCACCGGCGGCTGAGCTGCTGT +
Preference number: 6 (lower is better)
Translates to: IGHGSMGPRRGS*FPRGHRRLSCC
Trigger: ACAGCAGCTCAGCCGCCGGTGCCCCCTCGGAAACCATGACCCCCGGCGCGGGCCCATGGAGCCATGGCCTAT
71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CCA 72 bp GGCAACCGCTTGGTACCCAGCTTGGGTGAGCCGGAGTaGTTGGAACCGGAGAGGCGAGGGGCGGGCACGGCG +
Preference number: 6 (lower is better)
Translates to: GNRLVPSLGEPE*LEPERRGAGTA
Trigger: CGCCGTGCCCGCCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCGGTTGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS TCA 72 bp GAGGGCTTGGGGCAACCGCTTGGTACCCAGCTTGGGTaGGCCGGAGTGGTTGGAACCGGAGAGGCGAGGGGC +
Preference number: 6 (lower is better)
Translates to: EGLGQPLGTQLG*AGVVGTGEARG
Trigger: GCCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAGCCCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CAA 90 bp TTCACGCCCACAATGAGGGCTTGGGGCAACCGCTTGGTACCCAGCTaGGGTGAGCCGGAGTGGTTGGAACCGGAGAGGCGAGGGGCGGGC +
Preference number: 6 (lower is better)
Translates to: FTPTMRAWGNRLVPS*GEPEWLEPERRGAG
Trigger: GCCCGCCCCTCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAGCCCTCATTGTGGGCGTGAA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS TCA 72 bp AGCTGTAACACAGGTAAGTGCAGGAGAGCGAGAGCGTaGAGGCGAAGAGCAGCCTGCGCGCCCTCCGCGGCT +
Preference number: 6 (lower is better)
Translates to: SCNTGKCRRARA*RRRAACAPSAA
Trigger: AGCCGCGGAGGGCGCGCAGGCTGCTCTTCGCCTTCACGCTCTCGCTCTCCTGCACTTACCTGTGTTACAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1
CDS CAA 72 bp ACAATGAGGGCTTGGGGCAACCGCTTGGTACCCAGCTaGGGTGAGCCGGAGTGGTTGGAACCGGAGAGGCGA +
Preference number: 6 (lower is better)
Translates to: TMRAWGNRLVPS*GEPEWLEPERR
Trigger: TCGCCTCTCCGGTTCCAACCACTCCGGCTCACCCAAGCTGGGTACCAAGCGGTTGCCCCAAGCCCTCATTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000261374.4
ENST00000473392.1