RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS3ST1 (Homo sapiens)

Ensembl gene IDs: ENSG00000002587

Ensembl transcript IDs: ENST00000002596.6, ENST00000510712.1, ENST00000514690.5

Found 385 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CTCGGCCCCCTGCAACCTCCACCTGCCAGGTTCAAGTGGTTCTCTTaGCTCAGTGTCCTGAGTAGCTGGGATTACAGGCACTCGCCACCA +
Preference number: 1 (lower is better)
Translates to: LGPLQPPPARFKWFS*LSVLSSWDYRHSPP
Trigger: TGGTGGCGAGTGCCTGTAATCCCAGCTACTCAGGACACTGAGGCAAGAGAACCACTTGAACCTGGCAGGTGGAGGTTGCAGGGGGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp AATCTAATAGCTGAGGCTTGGTTCAGTTGTTCTCACTTGCCTCTCTaGAAGGACCCACCTAGATCCCCCAGGCTGCTCCCGGGCCGGGGT +
Preference number: 1 (lower is better)
Translates to: NLIAEAWFSCSHLPL*KDPPRSPRLLPGRG
Trigger: ACCCCGGCCCGGGAGCAGCCTGGGGGATCTAGGTGGGTCCTTCCAGAGAGGCAAGTGAGAACAACTGAACCAAGCCTCAGCTATTAGATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp CCCCGTGACCACTGTCTTCATGTCTCAAGCTTCCCTTGTTCAGAATaGCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCT +
Preference number: 1 (lower is better)
Translates to: PRDHCLHVSSFPCSE*PALVTLLPFVRAPA
Trigger: AGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGGCATTCTGAACAAGGGAAGCTTGAGACATGAAGACAGTGGTCACGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp TTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTAGGCTCCTaGGTCACTGCATTTTGGCCCTGTAAGGACAGCCCAGGGTCTACT +
Preference number: 1 (lower is better)
Translates to: LVEGMFWRDRVLLGS*VTAFWPCKDSPGST
Trigger: AGTAGACCCTGGGCTGTCCTTACAGGGCCAAAATGCAGTGACTCAGGAGCCTAATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp GCCTTCCCACAGGAAGGTCAGGGTCTCTGTGGCCCACAAGTTAAGTaGCCTGCCCTGACATGCGACCTCTGGGAAGATTCTCTATTTCTT +
Preference number: 1 (lower is better)
Translates to: AFPQEGQGLCGPQVK*PALTCDLWEDSLFL
Trigger: AAGAAATAGAGAATCTTCCCAGAGGTCGCATGTCAGGGCAGGTCACTTAACTTGTGGGCCACAGAGACCCTGACCTTCCTGTGGGAAGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp ACTGAGGATAAGAAGGGTTTATGTGACCATCTCCAACAAGCTGGCTaGTCAGGGGCAGAAGTAAAACTGAACTCCAGCCACTCCTCTGGG +
Preference number: 1 (lower is better)
Translates to: TEDKKGLCDHLQQAG*SGAEVKLNSSHSSG
Trigger: CCCAGAGGAGTGGCTGGAGTTCAGTTTTACTTCTGCCCCTGAGCAGCCAGCTTGTTGGAGATGGTCACATAAACCCTTCTTATCCTCAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp CCTTCTCTCACTGTGTGCTGTTTGGAGAACTCTGTTATGTTGCTCTaGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGG +
Preference number: 1 (lower is better)
Translates to: PSLTVCCLENSVMLL*PLTQAQSSEMSCCR
Trigger: CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACATAACAGAGTTCTCCAAACAGCACACAGTGAGAGAAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp TCGCAGTTTCTCTTTTCTATTCTAATTGGCTTTCTGGAGGCCAGCTaGCACCTGGGGCAAAGTATCCAGGTCCAAGATCATTCTGAAGGC +
Preference number: 1 (lower is better)
Translates to: SQFLFSILIGFLEAS*HLGQSIQVQDHSEG
Trigger: GCCTTCAGAATGATCTTGGACCTGGATACTTTGCCCCAGGTGGCAGCTGGCCTCCAGAAAGCCAATTAGAATAGAAAAGAGAAACTGCGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp TTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTaGCGGTTAGGAGCATGTTTTATCACGTCCCTGTTGCATCAAATC +
Preference number: 1 (lower is better)
Translates to: LLWPLTQAQSSEMSC*RLGACFITSLLHQI
Trigger: GATTTGATGCAACAGGGACGTGATAAAACATGCTCCTAACCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTaGTGCCGGTTAGGAGCATGTTTTATCACGTCCCTGTTGCATCAA +
Preference number: 1 (lower is better)
Translates to: MLLWPLTQAQSSEMS*CRLGACFITSLLHQ
Trigger: TTGATGCAACAGGGACGTGATAAAACATGCTCCTAACCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp AGGAAGGTCAGGGTCTCTGTGGCCCACAAGTTAAGTGACCTGCCCTaGCATGCGACCTCTGGGAAGATTCTCTATTTCTTAATATTTCTG +
Preference number: 1 (lower is better)
Translates to: RKVRVSVAHKLSDLP*HATSGKILYFLIFL
Trigger: CAGAAATATTAAGAAATAGAGAATCTTCCCAGAGGTCGCATGTCAGGGCAGGTCACTTAACTTGTGGGCCACAGAGACCCTGACCTTCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp TCTACCAGACCATCCCTGTCAGGGGACAGGAATTTACAGGCAGTTTaGAAAGAGCATCTTCTTCAGTCAGAGACTCTCATTGCAGTTTCC +
Preference number: 1 (lower is better)
Translates to: STRPSLSGDRNLQAV*KEHLLQSETLIAVS
Trigger: GGAAACTGCAATGAGAGTCTCTGACTGAAGAAGATGCTCTTTGCAAACTGCCTGTAAATTCCTGTCCCCTGACAGGGATGGTCTGGTAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp AGGCTTCTTCTTGCCCTTCCTGTATCTGGGACACACCTCTTAGGATaGAAGATATTTGGCACCTGGGAAGAAATGTTAAGTCAGGTCAGG +
Preference number: 1 (lower is better)
Translates to: RLLLALPVSGTHLLG*KIFGTWEEMLSQVR
Trigger: CCTGACCTGACTTAACATTTCTTCCCAGGTGCCAAATATCTTCCATCCTAAGAGGTGTGTCCCAGATACAGGAAGGGCAAGAAGAAGCCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp ACACTGCTGAGAAAAATGCAGGCTTCTTCTTGCCCTTCCTGTATCTaGGACACACCTCTTAGGATGGAAGATATTTGGCACCTGGGAAGA +
Preference number: 1 (lower is better)
Translates to: TLLRKMQASSCPSCI*DTPLRMEDIWHLGR
Trigger: TCTTCCCAGGTGCCAAATATCTTCCATCCTAAGAGGTGTGTCCCAGATACAGGAAGGGCAAGAAGAAGCCTGCATTTTTCTCAGCAGTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp CAGTGTACCTTCTCAATGACTGGCTGGGGTTGTACCAAAAATGAATaGACAGATAGTGCCACTAGGACCTCTGATCCCTTGCTCATGGTA +
Preference number: 1 (lower is better)
Translates to: QCTFSMTGWGCTKNE*TDSATRTSDPLLMV
Trigger: TACCATGAGCAAGGGATCAGAGGTCCTAGTGGCACTATCTGTTCATTCATTTTTGGTACAACCCCAGCCAGTCATTGAGAAGGTACACTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp CCCAGGGTCTACTACAGGGCCTCCTTTGAATTTGACAGTGCTTGGTaGGATCTAGCAATAAATACCTTGGGTAAGTCTGGAGTGATGGTT +
Preference number: 1 (lower is better)
Translates to: PRVYYRASFEFDSAW*DLAINTLGKSGVMV
Trigger: AACCATCACTCCAGACTTACCCAAGGTATTTATTGCTAGATCTCACCAAGCACTGTCAAATTCAAAGGAGGCCCTGTAGTAGACCCTGGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp CTGACTCTGGAGTGTCAAGTGTGTGAATATTCCAAATCTAATAGCTaGGGCTTGGTTCAGTTGTTCTCACTTGCCTCTCTGGAAGGACCC +
Preference number: 1 (lower is better)
Translates to: LTLECQVCEYSKSNS*GLVQLFSLASLEGP
Trigger: GGGTCCTTCCAGAGAGGCAAGTGAGAACAACTGAACCAAGCCTCAGCTATTAGATTTGGAATATTCACACACTTGACACTCCAGAGTCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp GCCTTGGAAAGCAGTAGCTTCTCATTGAGTTTAACACATTTGACATaGCACTCAGACAAATCTCTTGCCTACCTCTACCCTCTACCCCCA +
Preference number: 1 (lower is better)
Translates to: ALESSSFSLSLTHLT*HSDKSLAYLYPLPP
Trigger: TGGGGGTAGAGGGTAGAGGTAGGCAAGAGATTTGTCTGAGTGGCATGTCAAATGTGTTAAACTCAATGAGAAGCTACTGCTTTCCAAGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp TTTTATGCAACAGATACACCTGCACAGGAGCCAAATTCACATGGGTaGCTGCTAAGTAAGCTTCCAACACTCCAGCCTTGGAAAGCAGTA +
Preference number: 1 (lower is better)
Translates to: FYATDTPAQEPNSHG*LLSKLPTLQPWKAV
Trigger: TACTGCTTTCCAAGGCTGGAGTGTTGGAAGCTTACTTAGCAGGCACCCATGTGAATTTGGCTCCTGTGCAGGTGTATCTGTTGCATAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp GGCACCTGGGAAGAAATGTTAAGTCAGGTCAGGAAGAACTGGCTCTaGGTCTGGGCTTTTCCTTTTGAGTTCAGAAAGAGTTGGGTAAAA +
Preference number: 1 (lower is better)
Translates to: GTWEEMLSQVRKNWL*VWAFPFEFRKSWVK
Trigger: TTTTACCCAACTCTTTCTGAACTCAAAAGGAAAAGCCCAGACTCAGAGCCAGTTCTTCCTGACCTGACTTAACATTTCTTCCCAGGTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 90 bp CTCTTCTCTATAAGGGGGCTAGTTGATTTCTCTCAGGAATGTTGCTaGACTGAATGCCAAACCATGGAACACATTCCCCCACCCATTCTA +
Preference number: 1 (lower is better)
Translates to: LFSIRGLVDFSQECC*TECQTMEHIPPPIL
Trigger: TAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGCATTCAGTTCAGCAACATTCCTGAGAGAAATCAACTAGCCCCCTTATAGAGAAGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp CTCACTTCCCTGATAACACTGCTGAGAAAAATGCAGGCTTCTTCTTaGCCTTCCTGTATCTGGGACACACCTCTTAGGATGGAAGATATT +
Preference number: 1 (lower is better)
Translates to: LTSLITLLRKMQASS*PSCIWDTPLRMEDI
Trigger: AATATCTTCCATCCTAAGAGGTGTGTCCCAGATACAGGAAGGGCAAGAAGAAGCCTGCATTTTTCTCAGCAGTGTTATCAGGGAAGTGAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp ACAGGCAGTTTGCAAAGAGCATCTTCTTCAGTCAGAGACTCTCATTaGAGTTTCCTTTCAGTCACCATATTCCTGAACAGGCTTGGAAAC +
Preference number: 1 (lower is better)
Translates to: TGSLQRASSSVRDSH*SFLSVTIFLNRLGN
Trigger: GTTTCCAAGCCTGTTCAGGAATATGGTGACTGAAAGGAAACTGCAATGAGAGTCTCTGACTGAAGAAGATGCTCTTTGCAAACTGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp CTCTCATTGCAGTTTCCTTTCAGTCACCATATTCCTGAACAGGCTTaGAAACTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCT +
Preference number: 1 (lower is better)
Translates to: LSLQFPFSHHIPEQA*KLDLTLLGPLISSA
Trigger: AGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAGTTTCCAAGCCTGTTCAGGAATATGGTGACTGAAAGGAAACTGCAATGAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp GTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTaGCTAATAGACAGATGCATATGCTTTATATCTTCCTCCACTTAC +
Preference number: 1 (lower is better)
Translates to: VQLQILDAHNFPYRL*LIDRCICFISSSTY
Trigger: GTAAGTGGAGGAAGATATAAAGCATATGCATCTGTCTATTAGGCAGAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp GCCCATAATTTCCCTTACAGGCTCTGCCTAATAGACAGATGCATATaGTTTATATCTTCCTCCACTTACCCACAAATAGATGGACTGAAA +
Preference number: 1 (lower is better)
Translates to: AHNFPYRLCLIDRCI*FISSSTYPQIDGLK
Trigger: TTTCAGTCCATCTATTTGTGGGTAAGTGGAGGAAGATATAAAGCATATGCATCTGTCTATTAGGCAGAGCCTGTAAGGGAAATTATGGGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 90 bp CTAGATGCCCATAATTTCCCTTACAGGCTCTGCCTAATAGACAGATaGATATGCTTTATATCTTCCTCCACTTACCCACAAATAGATGGA +
Preference number: 1 (lower is better)
Translates to: LDAHNFPYRLCLIDR*ICFISSSTYPQIDG
Trigger: TCCATCTATTTGTGGGTAAGTGGAGGAAGATATAAAGCATATGCATCTGTCTATTAGGCAGAGCCTGTAAGGGAAATTATGGGCATCTAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp CAACAGAGTACAGTACATATCTGCCCATTTTTATGGAGAAGGAAATaGAGGTTCTCAGAGTCTGAATCTAAGATCCCATGGTCAGTGATT +
Preference number: 1 (lower is better)
Translates to: QQSTVHICPFLWRRK*RFSESESKIPWSVI
Trigger: AATCACTGACCATGGGATCTTAGATTCAGACTCTGAGAACCTCCATTTCCTTCTCCATAAAAATGGGCAGATATGTACTGTACTCTGTTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 90 bp CAGATGCATATGCTTTATATCTTCCTCCACTTACCCACAAATAGATaGACTGAAAAGGAGCAGAGACATCGGAGACAAAATTTCATTTGT +
Preference number: 1 (lower is better)
Translates to: QMHMLYIFLHLPTNR*TEKEQRHRRQNFIC
Trigger: ACAAATGAAATTTTGTCTCCGATGTCTCTGCTCCTTTTCAGTCCATCTATTTGTGGGTAAGTGGAGGAAGATATAAAGCATATGCATCTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTCGGGCCGGGGTGGTCTaGACAGGAGACCCACCCCTT +
Preference number: 2 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCRAGVV*TGDPPL
Trigger: AAGGGGTGGGTCTCCTGTCCAGACCACCCCGGCCCG...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCACAGGCTGGAGTGCAGTaGCATCATCTCGGCCCCCTG +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPQAGVQ*HHLGPL
Trigger: CAGGGGGCCGAGATGATGCCACTGCACTCCAGCCTG...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCCTAGATCCCCCAGGCTaGTCCCGGGCCGGGGTGGTC +
Preference number: 2 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFLDPPG*SRAGVV
Trigger: GACCACCCCGGCCCGGGAGCAGCCTGGGGGATCTAG...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCACAAGATCCAACGATGTaGTGCAGAGGGAGGCTCTCT +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPQDPTM*CRGRLS
Trigger: AGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTG...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCATGTGACCTCCAAAAATaGCAAGGAATCGCCGAGGAG +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPCDLQK*QGIAEE
Trigger: CTCCTCGGCGATTCCTTGTCATTTTTGGAGGTCACA...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTTGCCCAGGCTGGAGTaGAGTGGCATCATCTCGGCC +
Preference number: 2 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFLPRLE*SGIISA
Trigger: GGCCGAGATGATGCCACTGCACTCCAGCCTGGGCAA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAAAGGCAGCGCATTTCTaGCGACTGGTTCAAAACCAG +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPKAAHF*RLVQNQ
Trigger: CTGGTTTTGAACCAGTCGGCAGAAATGCGCTGCCTT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAGTAGAAGGCATGTTTTaGAGGGACCGGGTGCTATTA +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPVEGMF*RDRVLL
Trigger: TAATAGCACCCGGTCCCTCCAAAACATGCCTTCTAC...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTAGTGTCCTGAGTAGCTaGGATTACAGGCACTCGCCA +
Preference number: 2 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCSVLSS*DYRHSP
Trigger: TGGCGAGTGCCTGTAATCCCAGCTACTCAGGACACT...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTAGGCTCTCTGCCTATTaGAAAGTACCATGTCCACCA +
Preference number: 2 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCRLSAY*KVPCPP
Trigger: TGGTGGACATGGTACTTTTCAATAGGCAGAGAGCCT...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCATCCAAATCTAATAGCTaGGGCTTGGTTCAGTTGTTC +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPSKSNS*GLVQLF
Trigger: GAACAACTGAACCAAGCCTCAGCTATTAGATTTGGA...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCACTGACATGCGACCTCTaGGAAGATTCTCTATTTCTT +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPLTCDL*EDSLFL
Trigger: AAGAAATAGAGAATCTTCCCAGAGGTCGCATGTCAG...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCACTGCCATTCGTGCGTaGCCCAGCTTTATGGCAATT +
Preference number: 2 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFTAIRA*PSFMAI
Trigger: AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCAGGCCAGCTGCCACCTaGGGCAAAGTATCCAGGTCC +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLRPAAT*GKVSRS
Trigger: GGACCTGGATACTTTGCCCCAGGTGGCAGCTGGCCT...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAATGGCTCTATCAACATaGGCAAGCCCTTTAATTTCT +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPMALST*ASPLIS
Trigger: AGAAATTAAAGGGCTTGCCCATGTTGATAGAGCCAT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCATTCCTCTGGGGGAGATaGTGGCTTAATGACAACTTC +
Preference number: 2 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPFLWGR*WLNDNF
Trigger: GAAGTTGTCATTAAGCCATCATCTCCCCCAGAGGAA...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGGACTCAATACCATGTTaGGCATGTGGTAGGGGATCA +
Preference number: 2 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRDSIPC*ACGRGS
Trigger: TGATCCCCTACCACATGCTCAACATGGTATTGAGTC...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTTAAGTGACCTGCCCTaGCATGCGACCTCTGGGAAG +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGALSDLP*HATSGK
Trigger: CTTCCCAGAGGTCGCATGTCAGGGCAGGTCACTTAA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGGCCCACAAGTTAAGTaGCCTGCCCTGACATGCGAC +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLGPQVK*PALTCD
Trigger: GTCGCATGTCAGGGCAGGTCACTTAACTTGTGGGCC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAATAATATCTGCATCCTaGGGTTGCTTGGAGAAATTT +
Preference number: 2 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPIISAS*GCLEKF
Trigger: AAATTTCTCCAAGCAACCCCAGGATGCAGATATTAT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTACAGGCTTGGAAACTTaGCTTAACCTTGCTGGGCCC +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGATGLET*LNLAGP
Trigger: GGGCCCAGCAAGGTTAAGTCAAGTTTCCAAGCCTGT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTACCCACCCCTTCCACTaGCACCTGTCTCTGTTAATG +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGATHPFH*HLSLLM
Trigger: CATTAACAGAGACAGGTGTCAGTGGAAGGGGTGGGT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAGATTTCAACCCTATCTaGTTCCAGGAGGAAGGGAAA +
Preference number: 2 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPDFNPI*FQEEGK
Trigger: TTTCCCTTCCTCCTGGAATCAGATAGGGTTGAAATC...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCGGAATGTTGCTGAACTaGATGCCAAACCATGGAACA +
Preference number: 2 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFGMLLN*MPNHGT
Trigger: TGTTCCATGGTTTGGCATTCAGTTCAGCAACATTCC...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTTGCTGTAAATATTTCTaGTACTTCCTCTGGGGGAGA +
Preference number: 2 (lower is better)
Translates to: PCSGDTTAIRACPSFMAICCKYF*YFLWGR
Trigger: TCTCCCCCAGAGGAAGTAGCAGAAATATTTACAGCA...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGACACACCTCTTAGGATaGAAGATATTTGGCACCTGG +
Preference number: 2 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRTHLLG*KIFGTW
Trigger: CCAGGTGCCAAATATCTTCCATCCTAAGAGGTGTGT...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTCTGTTATGTTGCTCTaGCCTTTAACTCAGGCTCAG +
Preference number: 2 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFSVMLL*PLTQAQ
Trigger: CTGAGCCTGAGTTAAAGGCCAGAGCAACATAACAGA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTaGGAGGGACCGGGTGCTATTAGGCTCCTGAGTCACTGCATTTTG +
Preference number: 2 (lower is better)
Translates to: PLTPVSVNGIGRRHV*EGPGAIRLLSHCIL
Trigger: CAAAATGCAGTGACTCAGGAGCCTAATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTCTTTATTATAACTGCTaGGATCAGAAGCATGTGCAA +
Preference number: 2 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCLYYNC*DQKHVQ
Trigger: TTGCACATGCTTCTGATCTCAGCAGTTATAATAAAG...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGTATAAGGGGGCTAGTTaGTTTCTCTCAGGAATGTTG +
Preference number: 2 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRYKGAS*FLSGML
Trigger: CAACATTCCTGAGAGAAATCAACTAGCCCCCTTATA...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGCATCCTGGGGTTGCTTaGAGAAATTTCAATGAGTTC +
Preference number: 2 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRHPGVA*RNFNEF
Trigger: GAACTCATTGAAATTTCTCCAAGCAACCCCAGGATG...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTTGCCCTTCCTGTATCTaGGACACACCTCTTAGGATG +
Preference number: 2 (lower is better)
Translates to: KARSNDVLQREALCLLKSCPSCI*DTPLRM
Trigger: CATCCTAAGAGGTGTGTCCCAGATACAGGAAGGGCA...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCCGTGCCCCAGCTTTATaGCAATTCCTCCATGAAGCC +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLRAPAL*QFLHEA
Trigger: GGCTTCATGGAGGAATTGCCATAAAGCTGGGGCACG...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCAGTGTACCTTCTCAATaGCTGGCTGGGGTTGTACCA +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLSVPSQ*LAGVVP
Trigger: TGGTACAACCCCAGCCAGTCATTGAGAAGGTACACT...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTAGTGGTTCTCTTAGGTaGTACCTTCAACTCTGCCCT +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGASGSLR*YLQLCP
Trigger: AGGGCAGAGTTGAAGGTAGCACCTAAGAGAACCACT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGAATGCAGGCTTCTTCTTaGCCTTCCTGTATCTGGGAC +
Preference number: 2 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGMQASS*PSCIWD
Trigger: GTCCCAGATACAGGAAGGGCAAGAAGAAGCCTGCAT...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCCTGAATGCCAAACCATaGAACACATTCCCCCACCCA +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLLNAKP*NTFPHP
Trigger: TGGGTGGGGGAATGTGTTCCATGGTTTGGCATTCAG...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATGGGTAAGTCTGGAGTaGTGGTTTCTTACACAGTGT +
Preference number: 2 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLWVSLE*WFLTQC
Trigger: ACACTGTGTAAGAAACCATCACTCCAGACTTACCCA...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTTGTCCACCAGGGGCCTaGTGTAAATATTTCTGCTAC +
Preference number: 2 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAICPPGA*CKYFCY
Trigger: GTAGCAGAAATATTTACAGCAGGCCCCTGGTGGACA...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACAGAGGGAGGCTCTCTaGCTATTGAAAAGTACCATG +
Preference number: 2 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGQREAL*LLKSTM
Trigger: CATGGTACTTTTCAATAGGCAGAGAGCCTCCCTCTG...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTTCAAGTGGTTCTCTTaGCTCAGTGTCCTGAGTAGC +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLFKWFS*LSVLSS
Trigger: GCTACTCAGGACACTGAGGCAAGAGAACCACTTGAA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTCCATCTCCTTTCAGTTaGGTAAGCCTCCAAGCACAG +
Preference number: 2 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFPSPFS*VSLQAQ
Trigger: CTGTGCTTGGAGGCTTACCCAACTGAAAGGAGATGG...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCTTTCTGGAGGCCAGCTaGCACCTGGGGCAAAGTATC +
Preference number: 2 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSFLEAS*HLGQSI
Trigger: GATACTTTGCCCCAGGTGGCAGCTGGCCTCCAGAAA...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTTGCATCCACAGTTCATaGTTCTACCAGACCATCCCT +
Preference number: 2 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFCIHSS*FYQTIP
Trigger: AGGGATGGTCTGGTAGAAGCATGAACTGTGGATGCA...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCCGCCTCCATCGACTATaGCAGTCCCAGCAGCTAGAT +
Preference number: 2 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSRLHRL*QSQQLD
Trigger: ATCTAGCTGCTGGGACTGGCATAGTCGATGGAGGCG...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGTTAACACATTTGACATaGCACTCAGACAAATCTCTT +
Preference number: 2 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRLTHLT*HSDKSL
Trigger: AAGAGATTTGTCTGAGTGGCATGTCAAATGTGTTAA...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTGCAACAGATACACCTaGACAGGAGCCAAATTCACA +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLCNRYT*TGAKFT
Trigger: TGTGAATTTGGCTCCTGTGCAGGTGTATCTGTTGCA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCCCATCTCCAACAAGCTaGCTGCTCAGGGGCAGAAGT +
Preference number: 2 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSPSPTS*LLRGRS
Trigger: ACTTCTGCCCCTGAGCAGCCAGCTTGTTGGAGATGG...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTTTATATTCCATGTGCTaGTCCTGTCTTCCTCCACTC +
Preference number: 2 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAILYSMC*SCLPPL
Trigger: GAGTGGAGGAAGACAGGACCAGCACATGGAATATAA...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 90 bp ACTCCAGCCTTGGAAAGCAGTAGCTTCTCATTGAGTTTAACACATTaGACATGCCACTCAGACAAATCTCTTGCCTACCTCTACCCTCTA +
Preference number: 2 (lower is better)
Translates to: TPALESSSFSLSLTH*TCHSDKSLAYLYPL
Trigger: TAGAGGGTAGAGGTAGGCAAGAGATTTGTCTGAGTGGCATGTCAAATGTGTTAAACTCAATGAGAAGCTACTGCTTTCCAAGGCTGGAGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 90 bp GCATGTTTTATCACGTCCCTGTTGCATCAAATCCCAGCCACTGCTTaGCTTGAAGGTAATCTTGATATCACCCTAACTGTCCAACTCCAA +
Preference number: 2 (lower is better)
Translates to: ACFITSLLHQIPATA*LEGNLDITLTVQLQ
Trigger: TTGGAGTTGGACAGTTAGGGTGATATCAAGATTACCTTCAAGCAAAGCAGTGGCTGGGATTTGATGCAACAGGGACGTGATAAAACATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACACAGACAGCTATTTTaGGTTGGGGGCAAGTTAATT +
Preference number: 2 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGHRQLF*VGGKLI
Trigger: AATTAACTTGCCCCCAACTCAAAATAGCTGTCTGTG...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATGTGCAAATATTCTTTaGGGTCAAGATGGATCCCAA +
Preference number: 2 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLCANIL*GQDGSQ
Trigger: TTGGGATCCATCTTGACCTCAAAGAATATTTGCACA...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTTGACAGTGCTTGGTaGGATCTAGCAATAAATACC +
Preference number: 2 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLFDSAW*DLAINT
Trigger: GGTATTTATTGCTAGATCTCACCAAGCACTGTCAAA...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTCTCCAACAAGCTGGCTaGTCAGGGGCAGAAGTAAAA +
Preference number: 2 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFLQQAG*SGAEVK
Trigger: TTTTACTTCTGCCCCTGAGCAGCCAGCTTGTTGGAG...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTCCATAATAATATCTaGATCCTGGGGTTGCTTGGA +
Preference number: 2 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLFHNNI*ILGLLG
Trigger: TCCAAGCAACCCCAGGATGCAGATATTATTATGGAA...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTAGGATGGAAGATATTTaGCACCTGGGAAGAAATGTT +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGARMEDI*HLGRNV
Trigger: AACATTTCTTCCCAGGTGCCAAATATCTTCCATCCT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTTCTCAATGACTGGCTaGGGTTGTACCAAAAATGAA +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAFSMTG*GCTKNE
Trigger: TTCATTTTTGGTACAACCCCAGCCAGTCATTGAGAA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGATGTACCAAAAATGAATaGACAGATAGTGCCACTAGG +
Preference number: 2 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGCTKNE*TDSATR
Trigger: CCTAGTGGCACTATCTGTTCATTCATTTTTGGTACA...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR TCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCAATAATGGTGACCTGTaGCACCACCCCTGTAAGCAG +
Preference number: 2 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSNNGDL*HHPCKQ
Trigger: CTGCTTACAGGGGTGGTGTCACAGGTCACCATTATT...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTTTCTGTCATTTTCCTaGGGTATAAACCATGTCAGG +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLFLSFS*GINHVR
Trigger: CCTGACATGGTTTATACCGCAGGAAAATGACAGAAA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 90 bp AACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCTCTTTAGCTTaGGCCTTCTCTCACTGTGTGCTGTTTGGAGAACTCTGTTATGTT +
Preference number: 2 (lower is better)
Translates to: NTLVKQLNPMMSSLA*AFSHCVLFGELCYV
Trigger: AACATAACAGAGTTCTCCAAACAGCACACAGTGAGAGAAGGCCAAAGCTAAAGAGGACATCATCGGATTTAGCTGCTTCACTAAAGTGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTGCCTAATAGACAGATaGATATGCTTTATATCTTCC +
Preference number: 2 (lower is better)
Translates to: VKVQFQEKSSLSLISRGACLIDR*ICFISS
Trigger: GGAAGATATAAAGCATATGCATCTGTCTATTAGGCA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCATAGACAGATGCATATaGTTTATATCTTCCTCCACT +
Preference number: 2 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLIDRCI*FISSST
Trigger: AGTGGAGGAAGATATAAAGCATATGCATCTGTCTAT...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCCTTTTCTATTCTAATTaGCTTTCTGGAGGCCAGCTG +
Preference number: 2 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSLFYSN*LSGGQL
Trigger: CAGCTGGCCTCCAGAAAGCCAATTAGAATAGAAAAG...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR GCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCAATTTACAGGCAGTTTaGAAAGAGCATCTTCTTCAG +
Preference number: 2 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSNLQAV*KEHLLQ
Trigger: CTGAAGAAGATGCTCTTTGCAAACTGCCTGTAAATT...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 90 bp TGCTGTTATCTAACTGAGAAATTTGGGCAAAATAGAGTAAAGGTCTaGACATCAGGGATAACTAAAGCACCAAGGTCATTTTCTACATCA +
Preference number: 2 (lower is better)
Translates to: CCYLTEKFGQNRVKV*TSGITKAPRSFSTS
Trigger: TGATGTAGAAAATGACCTTGGTGCTTTAGTTATCCCTGATGTCAAGACCTTTACTCTATTTTGCCCAAATTTCTCAGTTAGATAACAGCA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp TGCCTCTCTGGAAGGACCCACCTAGATCCCCCAGGCTaGTCCCGGGCCGGGGTGGTCTGGACAGGAGACCCA +
Preference number: 3 (lower is better)
Translates to: CLSGRTHLDPPG*SRAGVVWTGDP
Trigger: TGGGTCTCCTGTCCAGACCACCCCGGCCCGGGAGCAGCCTGGGGGATCTAGGTGGGTCCTTCCAGAGAGGCA
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp GCAGTGGCATCATCTCGGCCCCCTGCAACCTCCACCTaGCAGGTTCAAGTGGTTCTCTTGCCTCAGTGTCCT +
Preference number: 3 (lower is better)
Translates to: AVASSRPPATST*QVQVVLLPQCP
Trigger: AGGACACTGAGGCAAGAGAACCACTTGAACCTGGCAGGTGGAGGTTGCAGGGGGCCGAGATGATGCCACTGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 72 bp GCTGAGGCTTGGTTCAGTTGTTCTCACTTGCCTCTCTaGAAGGACCCACCTAGATCCCCCAGGCTGCTCCCG +
Preference number: 3 (lower is better)
Translates to: AEAWFSCSHLPL*KDPPRSPRLLP
Trigger: CGGGAGCAGCCTGGGGGATCTAGGTGGGTCCTTCCAGAGAGGCAAGTGAGAACAACTGAACCAAGCCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 72 bp CTCGGCCCCCTGCAACCTCCACCTGCCAGGTTCAAGTaGTTCTCTTGCCTCAGTGTCCTGAGTAGCTGGGAT +
Preference number: 3 (lower is better)
Translates to: LGPLQPPPARFK*FSCLSVLSSWD
Trigger: ATCCCAGCTACTCAGGACACTGAGGCAAGAGAACCACTTGAACCTGGCAGGTGGAGGTTGCAGGGGGCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAGGTAGAAGGCATGTTTaGGAGGGACCGGGTGCTATT +
Preference number: 3 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPGRRHV*EGPGAI
Trigger: AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACC...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp ATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATaGGGGTGGACTGTTACCCTACTACCCCCATGCCCC +
Preference number: 3 (lower is better)
Translates to: MSCTRGCPAWRQ*GWTVTLLPPCP
Trigger: GGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCATTCAGTTGTTCTCACTaGCCTCTCTGGAAGGACCCA +
Preference number: 3 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPFSCSH*PLWKDP
Trigger: TGGGTCCTTCCAGAGAGGCAAGTGAGAACAACTGAA...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp GGCATGTTTTGGAGGGACCGGGTGCTATTAGGCTCCTaGGTCACTGCATTTTGGCCCTGTAAGGACAGCCCA +
Preference number: 3 (lower is better)
Translates to: GMFWRDRVLLGS*VTAFWPCKDSP
Trigger: TGGGCTGTCCTTACAGGGCCAAAATGCAGTGACTCAGGAGCCTAATAGCACCCGGTCCCTCCAAAACATGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp CAGGAAGGTCAGGGTCTCTGTGGCCCACAAGTTAAGTaGCCTGCCCTGACATGCGACCTCTGGGAAGATTCT +
Preference number: 3 (lower is better)
Translates to: QEGQGLCGPQVK*PALTCDLWEDS
Trigger: AGAATCTTCCCAGAGGTCGCATGTCAGGGCAGGTCACTTAACTTGTGGGCCACAGAGACCCTGACCTTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAATCTGCATCCTGGGGTaGCTTGGAGAAATTTCAATG +
Preference number: 3 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPICILG*LGEISM
Trigger: CATTGAAATTTCTCCAAGCAACCCCAGGATGCAGAT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAACACAGACAGCTATTTaGAGTTGGGGGCAAGTTAAT +
Preference number: 3 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPTQTAI*SWGQVN
Trigger: ATTAACTTGCCCCCAACTCAAAATAGCTGTCTGTGT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAACCTACTTTATCTCATaGAGTTGGAGTTTTCCCCCA +
Preference number: 3 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPTYFIS*SWSFPP
Trigger: TGGGGGAAAACTCCAACTCAATGAGATAAAGTAGGT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp TCTCAAGCTTCCCTTGTTCAGAATGCCCTGCTCTGGTaGCACTACTGCCATTCGTGCGTGCCCCAGCTTTAT +
Preference number: 3 (lower is better)
Translates to: SQASLVQNALLW*HYCHSCVPQLY
Trigger: ATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGGCATTCTGAACAAGGGAAGCTTGAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAAATGCAGGCTTCTTCTaGCCCTTCCTGTATCTGGGA +
Preference number: 3 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPNAGFF*PFLYLG
Trigger: TCCCAGATACAGGAAGGGCAAGAAGAAGCCTGCATT...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTGTCTCAAGCTTCCCTaGTTCAGAATGCCCTGCTCT +
Preference number: 3 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFCLKLP*FRMPCS
Trigger: AGAGCAGGGCATTCTGAACAAGGGAAGCTTGAGACA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCACTACAGGGCCTCCTTaGAATTTGACAGTGCTTGGT +
Preference number: 3 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFTTGPP*NLTVLG
Trigger: ACCAAGCACTGTCAAATTCAAAGGAGGCCCTGTAGT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp ACAGATACACCTGCACAGGAGCCAAATTCACATGGGTaGCTGCTAAGTAAGCTTCCAACACTCCAGCCTTGG +
Preference number: 3 (lower is better)
Translates to: TDTPAQEPNSHG*LLSKLPTLQPW
Trigger: CCAAGGCTGGAGTGTTGGAAGCTTACTTAGCAGGCACCCATGTGAATTTGGCTCCTGTGCAGGTGTATCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp TGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTaGTGCCGGTTAGGAGCATGTTTTATCACGTCCCTG +
Preference number: 3 (lower is better)
Translates to: WPLTQAQSSEMS*CRLGACFITSL
Trigger: CAGGGACGTGATAAAACATGCTCCTAACCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTTCTCTGTTAATGGAATaGGTAGAAGGCATGTTTTGG +
Preference number: 3 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCSLLME*VEGMFW
Trigger: CCAAAACATGCCTTCTACCAATTCCATTAACAGAGA...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCGAGAACTCTGTTATGTaGCTCTGGCCTTTAACTCAG +
Preference number: 3 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFENSVM*LWPLTQ
Trigger: CTGAGTTAAAGGCCAGAGCAACATAACAGAGTTCTC...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp AGGGTCTCTGTGGCCCACAAGTTAAGTGACCTGCCCTaGCATGCGACCTCTGGGAAGATTCTCTATTTCTTA +
Preference number: 3 (lower is better)
Translates to: RVSVAHKLSDLP*HATSGKILYFL
Trigger: TAAGAAATAGAGAATCTTCCCAGAGGTCGCATGTCAGGGCAGGTCACTTAACTTGTGGGCCACAGAGACCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp AAGAAGGGTTTATGTGACCATCTCCAACAAGCTGGCTaGTCAGGGGCAGAAGTAAAACTGAACTCCAGCCAC +
Preference number: 3 (lower is better)
Translates to: KKGLCDHLQQAG*SGAEVKLNSSH
Trigger: GTGGCTGGAGTTCAGTTTTACTTCTGCCCCTGAGCAGCCAGCTTGTTGGAGATGGTCACATAAACCCTTCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp CCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTaGCGGTTAGGAGCATGTTTTATCACGTCCCTGTTG +
Preference number: 3 (lower is better)
Translates to: PLTQAQSSEMSC*RLGACFITSLL
Trigger: CAACAGGGACGTGATAAAACATGCTCCTAACCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAGAGGCTCTCTGCCTATaGAAAAGTACCATGTCCACC +
Preference number: 3 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLEALCL*KSTMST
Trigger: GGTGGACATGGTACTTTTCAATAGGCAGAGAGCCTC...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCCTTTATCTCATTGAGTaGGAGTTTTCCCCCAACAGA +
Preference number: 3 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFLYLIE*EFSPNR
Trigger: TCTGTTGGGGGAAAACTCCAACTCAATGAGATAAAG...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp CTCTTTTCTATTCTAATTGGCTTTCTGGAGGCCAGCTaGCACCTGGGGCAAAGTATCCAGGTCCAAGATCAT +
Preference number: 3 (lower is better)
Translates to: LFSILIGFLEAS*HLGQSIQVQDH
Trigger: ATGATCTTGGACCTGGATACTTTGCCCCAGGTGGCAGCTGGCCTCCAGAAAGCCAATTAGAATAGAAAAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAAGGACCTCTGATCCCTaGCTCATGGTAGACTCATTT +
Preference number: 3 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLRTSDP*LMVDSF
Trigger: AAATGAGTCTACCATGAGCAAGGGATCAGAGGTCCT...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGGGCCTCCTTTGAATTaGACAGTGCTTGGTGAGATC +
Preference number: 3 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLGPPLN*TVLGEI
Trigger: GATCTCACCAAGCACTGTCAAATTCAAAGGAGGCCC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTTGAGTTTAACACATTaGACATGCCACTCAGACAAA +
Preference number: 3 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFLSLTH*TCHSDK
Trigger: TTTGTCTGAGTGGCATGTCAAATGTGTTAAACTCAA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGAGCAGTAGCTTCTCATaGAGTTTAACACATTTGACA +
Preference number: 3 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRSSSFS*SLTHLT
Trigger: TGTCAAATGTGTTAAACTCAATGAGAAGCTACTGCT...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp CCATCCCTGTCAGGGGACAGGAATTTACAGGCAGTTTaGAAAGAGCATCTTCTTCAGTCAGAGACTCTCATT +
Preference number: 3 (lower is better)
Translates to: PSLSGDRNLQAV*KEHLLQSETLI
Trigger: AATGAGAGTCTCTGACTGAAGAAGATGCTCTTTGCAAACTGCCTGTAAATTCCTGTCCCCTGACAGGGATGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 72 bp ACTGTGTGCTGTTTGGAGAACTCTGTTATGTTGCTCTaGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGC +
Preference number: 3 (lower is better)
Translates to: TVCCLENSVMLL*PLTQAQSSEMS
Trigger: GCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACATAACAGAGTTCTCCAAACAGCACACAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp TTCTCAATGACTGGCTGGGGTTGTACCAAAAATGAATaGACAGATAGTGCCACTAGGACCTCTGATCCCTTG +
Preference number: 3 (lower is better)
Translates to: FSMTGWGCTKNE*TDSATRTSDPL
Trigger: CAAGGGATCAGAGGTCCTAGTGGCACTATCTGTTCATTCATTTTTGGTACAACCCCAGCCAGTCATTGAGAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 72 bp TCTCTCAGGAATGTTGCTGAACTGAATGCCAAACCATaGAACACATTCCCCCACCCATTCTATACACAGCTA +
Preference number: 3 (lower is better)
Translates to: SLRNVAELNAKP*NTFPHPFYTQL
Trigger: TAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGCATTCAGTTCAGCAACATTCCTGAGAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTATGTGCAAATATTCTTaGAGGTCAAGATGGATCCCA +
Preference number: 3 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAIMCKYS*RSRWIP
Trigger: TGGGATCCATCTTGACCTCAAAGAATATTTGCACAT...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp GAAGAAATGTTAAGTCAGGTCAGGAAGAACTGGCTCTaGGTCTGGGCTTTTCCTTTTGAGTTCAGAAAGAGT +
Preference number: 3 (lower is better)
Translates to: EEMLSQVRKNWL*VWAFPFEFRKS
Trigger: ACTCTTTCTGAACTCAAAAGGAAAAGCCCAGACTCAGAGCCAGTTCTTCCTGACCTGACTTAACATTTCTTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp TACTACAGGGCCTCCTTTGAATTTGACAGTGCTTGGTaGGATCTAGCAATAAATACCTTGGGTAAGTCTGGA +
Preference number: 3 (lower is better)
Translates to: YYRASFEFDSAW*DLAINTLGKSG
Trigger: TCCAGACTTACCCAAGGTATTTATTGCTAGATCTCACCAAGCACTGTCAAATTCAAAGGAGGCCCTGTAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR TCA 72 bp GAGTGTCAAGTGTGTGAATATTCCAAATCTAATAGCTaGGGCTTGGTTCAGTTGTTCTCACTTGCCTCTCTG +
Preference number: 3 (lower is better)
Translates to: ECQVCEYSKSNS*GLVQLFSLASL
Trigger: CAGAGAGGCAAGTGAGAACAACTGAACCAAGCCTCAGCTATTAGATTTGGAATATTCACACACTTGACACTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp AGCAGTAGCTTCTCATTGAGTTTAACACATTTGACATaGCACTCAGACAAATCTCTTGCCTACCTCTACCCT +
Preference number: 3 (lower is better)
Translates to: SSSFSLSLTHLT*HSDKSLAYLYP
Trigger: AGGGTAGAGGTAGGCAAGAGATTTGTCTGAGTGGCATGTCAAATGTGTTAAACTCAATGAGAAGCTACTGCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CCA 72 bp ACAGTACATATCTGCCCATTTTTATGGAGAAGGAAATaGAGGTTCTCAGAGTCTGAATCTAAGATCCCATGG +
Preference number: 3 (lower is better)
Translates to: TVHICPFLWRRK*RFSESESKIPW
Trigger: CCATGGGATCTTAGATTCAGACTCTGAGAACCTCCATTTCCTTCTCCATAAAAATGGGCAGATATGTACTGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp CATAATTTCCCTTACAGGCTCTGCCTAATAGACAGATaGATATGCTTTATATCTTCCTCCACTTACCCACAA +
Preference number: 3 (lower is better)
Translates to: HNFPYRLCLIDR*ICFISSSTYPQ
Trigger: TTGTGGGTAAGTGGAGGAAGATATAAAGCATATGCATCTGTCTATTAGGCAGAGCCTGTAAGGGAAATTATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR GCA 72 bp CAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTaGCTAATAGACAGATGCATATGCTTTATATCTTCC +
Preference number: 3 (lower is better)
Translates to: QILDAHNFPYRL*LIDRCICFISS
Trigger: GGAAGATATAAAGCATATGCATCTGTCTATTAGGCAGAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR-3UTR CAA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCGGAAGCCGGTTTATTTaGCTTGTTTGTATTTTCTCT +
Preference number: 3 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSGSRFI*LVCIFS
Trigger: AGAGAAAATACAAACAAGCAAAATAAACCGGCTTCC...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTCCAGCAGTGCGCGCGTaGCGCCCTTGCGCACGCCGA +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCPAVRA*RPCARR
Trigger: TCGGCGTGCGCAAGGGCGGCACGCGCGCACTGCTGG...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCACGGTGGCTTCACTaGGCCGCGCGCCGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIPRWLH*AARRWV
Trigger: GACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGG...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTCGCAGAAGCTCCTGCTaGCCTAGCTCGGCGGGGCGG +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCRRSSC*PSSAGR
Trigger: CCGCCCCGCCGAGCTAGGCCAGCAGGAGCTTCTGCG...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTGGGCCGCGCGCCGCTaGGTCATGAAGTGCCGCAGC +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFWAARR*VMKCRS
Trigger: GCTGCGGCACTTCATGACCCAGCGGCGCGCGGCCCA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAGCTCCCGGGCCGGGGTaGTCTGGACAGGAGACCCAC +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPAPGPG*SGQETH
Trigger: GTGGGTCTCCTGTCCAGACCACCCCGGCCCGGGAGC...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTTTCCGCAGAAGCTCCTaGTGGCCTAGCTCGGCGGGG +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIFRRSS*WPSSAG
Trigger: CCCCGCCGAGCTAGGCCAGCAGGAGCTTCTGCGGAA...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGGCCGCCACGTCGGGGTaGAGGCTGAGCATCTCCAGC +
Preference number: 4 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRAATSG*RLSISS
Trigger: GCTGGAGATGCTCAGCCTGCACCCCGACGTGGCGGC...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTGTCTGCGGCAACTGCTaGGCAGAGCCGTTTGGGGCC +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIVCGNC*AEPFGA
Trigger: GGCCCCAAACGGCTCTGCCCAGCAGTTGCCGCAGAC...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCACGGGTCTCGCAGGATaGGCAGCAGCCGGATGGACG +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFTGLAG*AAAGWT
Trigger: CGTCCATCCGGCTGCTGCTCATCCTGCGAGACCCGT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTCCCAGCCTCTCCCCGTaGCCACTGTCTTCATGTCTC +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCPSLSP*PLSSCL
Trigger: GAGACATGAAGACAGTGGTCACGGGGAGAGGCTGGG...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGGCAGCGCGGCCATGCTaGACACCACGGTGGCTTCAC +
Preference number: 4 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRAARPC*TPRWLH
Trigger: GTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGC...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTTCCCAGTCGAAGAAGTaGACCTCGTTCTCCGCGGCC +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCSQSKK*TSFSAA
Trigger: GGCCGCGGAGAACGAGGTCCACTTCTTCGACTGGGA...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAACCCACCCCTTCCACTaGCACCTGTCTCTGTTAATG +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPTHPFH*HLSLLM
Trigger: CATTAACAGAGACAGGTGTCAGTGGAAGGGGTGGGT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGGCCATGGGCAGCACTaGCGAGCACCCGCGGCGGGT +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLGHGQH*RAPAAG
Trigger: ACCCGCCGCGGGTGCTCGGCAGTGCTGCCCATGGCC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTGAGACCCGGCTGTCGTaGCGGCGACTCCTGGCTGCC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSETRLS*RRLLAA
Trigger: GGCAGCCAGGAGTCGCCGCCACGACAGCCGGGTCTC...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCATCTCACTTGCCTCTCTaGAAGGACCCACCTAGATCC +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPSHLPL*KDPPRS
Trigger: GGATCTAGGTGGGTCCTTCCAGAGAGGCAAGTGAGA...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp CCTCAGCCTGATCTCACGAGGAGCTCTGAGCATGAGTaGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGG +
Preference number: 4 (lower is better)
Translates to: PQPDLTRSSEHE*HQRLSCLEAMR
Trigger: CCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTCAGAGCTCCTCGTGAGATCAGGCTGAGG
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTGGCGCAGGCACCCACTaGGACCCGGCTGTCGTGGCG +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFGAGTH*DPAVVA
Trigger: CGCCACGACAGCCGGGTCTCAGTGGGTGCCTGCGCC...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTACGCGCCGCTGGGTCATaGAGTGCCGCAGCAGGGAAG +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLRAAGS*SAAAGK
Trigger: CTTCCCTGCTGCGGCACTTCATGACCCAGCGGCGCG...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCGTCGGGGTGCAGGCTaGGCATCTCCAGCAGTGCGC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSRRGAG*ASPAVR
Trigger: GCGCACTGCTGGAGATGCTCAGCCTGCACCCCGACG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAAGTGTACCTTCTCAATaGCTGGCTGGGGTTGTACCA +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPSVPSQ*LAGVVP
Trigger: TGGTACAACCCCAGCCAGTCATTGAGAAGGTACACT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTGGGAAGGGGCTGTTCTaGCTCTGGAGTGTCAAGTGT +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCGKGLF*LWSVKC
Trigger: ACACTTGACACTCCAGAGTCAGAACAGCCCCTTCCC...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTGAGCATCTCCAGCAGTaGGCGCGTGCCGCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSEHLQQ*ARAALA
Trigger: CGCAAGGGCGGCACGCGCGCACTGCTGGAGATGCTC...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTGGATGGACGGGTTCATaGTGTAGACTCGCTCAGGCA +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCGWTGS*CRLAQA
Trigger: TGCCTGAGCGAGTCTACAGCATGAACCCGTCCATCC...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACTAGATCCCCCAGGCTaGTCCCGGGCCGGGGTGGTC +
Preference number: 4 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGLDPPG*SRAGVV
Trigger: GACCACCCCGGCCCGGGAGCAGCCTGGGGGATCTAG...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCATTGCCCAGGCTGGAGTaGAGTGGCATCATCTCGGCC +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPLPRLE*SGIISA
Trigger: GGCCGAGATGATGCCACTGCACTCCAGCCTGGGCAA...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTTGCTGGACACCACGGTaGCTTCACTGGGCCGCGCGC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSCWTPR*LHWAAR
Trigger: GCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCA...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGGCACTAGCTGGGGCTaGGCCACCAGCAGCACCGCG +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLGTSWG*ATSSTA
Trigger: CGCGGTGCTGCTGGTGGCCCAGCCCCAGCTAGTGCC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCGGGAAGGCACTAGCTaGGGCTGGGCCACCAGCAGC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSREGTS*GWATSS
Trigger: GCTGCTGGTGGCCCAGCCCCAGCTAGTGCCTTCCCG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGAGGCCAGCTGCCACCTaGGGCAAAGTATCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRRPAAT*GKVSRS
Trigger: GGACCTGGATACTTTGCCCCAGGTGGCAGCTGGCCT...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTCGGGCCGGGGTGGTCTaGACAGGAGACCCACCCCTT +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGARAGVV*TGDPPL
Trigger: AAGGGGTGGGTCTCCTGTCCAGACCACCCCGGCCCG...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp CTCACGAGGAGCTCTGAGCATGAGTTGCACCAGAGGTaGTCCTGCCTGGAGGCAATGAGGGTGGACTGTTAC +
Preference number: 4 (lower is better)
Translates to: LTRSSEHELHQR*SCLEAMRVDCY
Trigger: GTAACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTCAGAGCTCCTCGTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGGGTAGAGGCTGCGGTTaGGGGCCTTGTAGTCCACAT +
Preference number: 4 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRGRGCG*GPCSPH
Trigger: ATGTGGACTACAAGGCCCTCAACCGCAGCCTCTACC...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTATGGCAATTCCTCCATaGAGCCTTCCCACAGGAAGG +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCMAIPP*SLPTGR
Trigger: CCTTCCTGTGGGAAGGCTTCATGGAGGAATTGCCAT...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAGGAGCAGCGCGGCCATaGTGGACACCACGGTGGCTT +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLGAARP*WTPRWL
Trigger: AAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCC...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGCTGGGCAGAGCCGTTTaGGGCCACGCCATCGCGGAC +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWLGRAV*GHAIAD
Trigger: GTCCGCGATGGCGTGGCCCCAAACGGCTCTGCCCAG...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGTTCTCCACTGTGAGCTaGTGTGGCCAGGAGAAGGGC +
Preference number: 4 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRFSTVS*CGQEKG
Trigger: GCCCTTCTCCTGGCCACACCAGCTCACAGTGGAGAA...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAGATTTCAACCCTATCTaGTTCCAGGAGGAAGGGAAA +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPDFNPI*FQEEGK
Trigger: TTTCCCTTCCTCCTGGAATCAGATAGGGTTGAAATC...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCCTTGCCTCAGTGTCCTaGGTAGCTGGGATTACAGGC +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFLASVS*VAGITG
Trigger: GCCTGTAATCCCAGCTACTCAGGACACTGAGGCAAG...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCCGCCTCCATCGACTATaGCAGTCCCAGCAGCTAGAT +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFRLHRL*QSQQLD
Trigger: ATCTAGCTGCTGGGACTGGCATAGTCGATGGAGGCG...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGTCGCGGACGTCATCCTaGAGGGTCCCCGCTTTCCGC +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWSRTSS*RVPAFR
Trigger: GCGGAAAGCGGGGACCCTCCAGGATGACGTCCGCGA...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTCTGAATGCCAAACCATaGAACACATTCCCCCACCCA +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCLNAKP*NTFPHP
Trigger: TGGGTGGGGGAATGTGTTCCATGGTTTGGCATTCAG...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTAATAATGGTGACCTGTaGCACCACCCCTGTAAGCAG +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAINNGDL*HHPCKQ
Trigger: CTGCTTACAGGGGTGGTGTCACAGGTCACCATTATT...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTGGATCGACTTGGGGGTaGGCCCGGCCTTTGGACTCA +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAIGSTWG*ARPLDS
Trigger: TGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCC...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTATGCAGGCTTCTTCTTaGCCTTCCTGTATCTGGGAC +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIMQASS*PSCIWD
Trigger: GTCCCAGATACAGGAAGGGCAAGAAGAAGCCTGCAT...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCATTCCCTTACAGGCTCTaGCTAATAGACAGATGCATA +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPFPYRL*LIDRCI
Trigger: TATGCATCTGTCTATTAGGCAGAGCCTGTAAGGGAA...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAAACCTCTCGACCTTTTaGATCTCAGGGAAGGGGTCC +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPNLSTF*ISGKGS
Trigger: GGACCCCTTCCCTGAGATCCAAAAGGTCGAGAGGTT...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAGGTGCGCCCGGCCTTTaGACTCATGTAAGCAGCGGT +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLGAPGL*THVSSG
Trigger: ACCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACC...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCACATCCTGGGGTTGCTTaGAGAAATTTCAATGAGTTC +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPHPGVA*RNFNEF
Trigger: GAACTCATTGAAATTTCTCCAAGCAACCCCAGGATG...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTCAGGCCTTCAATTACTaGGCCGCGCCTCTGTCCAGC +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAIQAFNY*AAPLSS
Trigger: GCTGGACAGAGGCGCGGCTCAGTAATTGAAGGCCTG...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGGGGTCTTCTCCACTGTaGGCTGGTGTGGCCAGGAGA +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWGSSPL*AGVARR
Trigger: TCTCCTGGCCACACCAGCTCACAGTGGAGAAGACCC...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTGCACTTTGGGCGACGTaGAATACGCGGGGGTCTTCT +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAALWAT*NTRGSS
Trigger: AGAAGACCCCCGCGTATTTCACGTCGCCCAAAGTGC...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTGACTCAATACCATGTTaGGCATGTGGTAGGGGATCA +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIDSIPC*ACGRGS
Trigger: TGATCCCCTACCACATGCTCAACATGGTATTGAGTC...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTCGCTGGGTCATGAAGTaGCGCAGCAGGGAAGCCTCC +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFRWVMK*RSREAS
Trigger: GGAGGCTTCCCTGCTGCGGCACTTCATGACCCAGCG...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTTTCGAAGCATTGATCTaGGGCGACAGCTTTAGGAAC +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIFEALI*GDSFRN
Trigger: GTTCCTAAAGCTGTCGCCGCAGATCAATGCTTCGAA...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAGATCCAACGATGTGCTaGAGAGGGAGGCTCTCTGCC +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLDPTMC*RGRLSA
Trigger: GGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATC...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAAAGGCAGCGCATTTCTaGCGACTGGTTCAAAACCAG +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPKAAHF*RLVQNQ
Trigger: CTGGTTTTGAACCAGTCGGCAGAAATGCGCTGCCTT...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAACCCTACTACCCCCATaGCCCATCCCACATGGGTCA +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLTLLPP*PIPHGS
Trigger: TGACCCATGTGGGATGGGGCATGGGGGTAGTAGGGT...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCACCAGAGGTTGTCCTaGCTGGAGGCAATGAGGGTG +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSHQRLS*LEAMRV
Trigger: CACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTGAGCAAGTTTCTGGATaGCCCGGGGCAGGCGGGCGG +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFEQVSG*PGAGGR
Trigger: CCGCCCGCCTGCCCCGGGCCATCCAGAAACTTGCTC...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCAATAGGCTCCTAGGCTaGGCCATGGGCAGCACTGCC +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLNRLLG*AMGSTA
Trigger: GGCAGTGCTGCCCATGGCCCAGCCTAGGAGCCTATT...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCAGGAGAAGGGCATCTaGCTGAGGTACCAGCCCAAG +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSQEKGI*LRYQPK
Trigger: CTTGGGCTGGTACCTCAGCCAGATGCCCTTCTCCTG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCACTGTGAGCTGGTGTaGCCAGGAGAAGGGCATCTG +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSHCELV*PGEGHL
Trigger: CAGATGCCCTTCTCCTGGCCACACCAGCTCACAGTG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGAGTTTGGGATCGACTTaGGGGTGCGCCCGGCCTTTG +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWSLGST*GCARPL
Trigger: CAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACT...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTTTATATTCCATGTGCTaGTCCTGTCTTCCTCCACTC +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCLYSMC*SCLPPL
Trigger: GAGTGGAGGAAGACAGGACCAGCACATGGAATATAA...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCCCTTGTAGTCCACATTaGGCCTGCCATCGCGCACCA +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLPCSPH*ACHRAP
Trigger: TGGTGCGCGATGGCAGGCTCAATGTGGACTACAAGG...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCACTTTATTATAACTGCTaGGATCAGAAGCATGTGCAA +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPLYYNC*DQKHVQ
Trigger: TTGCACATGCTTCTGATCTCAGCAGTTATAATAAAG...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTTCCAAATCTAATAGCTaGGGCTTGGTTCAGTTGTTC +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCSKSNS*GLVQLF
Trigger: GAACAACTGAACCAAGCCTCAGCTATTAGATTTGGA...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTAATGCCCTGCTCTGGTaGCACTACTGCCATTCGTGC +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGANALLW*HYCHSC
Trigger: GCACGAATGGCAGTAGTGTCACCAGAGCAGGGCATT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTGTGGCAGCTGGGGTTaGGAGCACTTCCCTGGTAAA +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGACGSWG*EHFPGK
Trigger: TTTACCAGGGAAGTGCTCTCAACCCCAGCTGCCACA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAAGTGGTTCTCTTAGGTaGTACCTTCAACTCTGCCCT +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPSGSLR*YLQLCP
Trigger: AGGGCAGAGTTGAAGGTAGCACCTAAGAGAACCACT...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCCAGAGGGAGGCTCTCTaGCTATTGAAAAGTACCATG +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFQREAL*LLKSTM
Trigger: CATGGTACTTTTCAATAGGCAGAGAGCCTCCCTCTG...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGTTCAAGTGGTTCTCTTaGCTCAGTGTCCTGAGTAGC +
Preference number: 4 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRFKWFS*LSVLSS
Trigger: GCTACTCAGGACACTGAGGCAAGAGAACCACTTGAA...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTTCTCTCACTGTGTaGTGTTTGGAGAACTCTGTT +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAIPSLTV*CLENSV
Trigger: AACAGAGTTCTCCAAACAGCACACAGTGAGAGAAGG...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAAGTACAGTACATATCTaGCCATTTTTATGGAGAAGG +
Preference number: 4 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPSTVHI*PFLWRR
Trigger: CCTTCTCCATAAAAATGGGCAGATATGTACTGTACT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTAAGCCTCCTAGTCAGTaGCACATGGGCGTTTCAGGC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSKPPSQ*HMGVSG
Trigger: GCCTGAAACGCCCATGTGCCACTGACTAGGAGGCTT...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp AATCTAATAGCTGAGGCTTGGTTCAGTTGTTCTCACTaGCCTCTCTGGAAGGACCCACCTAGATCCCCCAGG +
Preference number: 4 (lower is better)
Translates to: NLIAEAWFSCSH*PLWKDPPRSPR
Trigger: CCTGGGGGATCTAGGTGGGTCCTTCCAGAGAGGCAAGTGAGAACAACTGAACCAAGCCTCAGCTATTAGATT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAGTGCTATTAGGCTCCTaGGTCACTGCATTTTGGCCC +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLVLLGS*VTAFWP
Trigger: GGGCCAAAATGCAGTGACTCAGGAGCCTAATAGCAC...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCAAGATCCAACGATGTaGTGCAGAGGGAGGCTCTCT +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSQDPTM*CRGRLS
Trigger: AGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGGTAGAGCAAGTTTCTaGATGGCCCGGGGCAGGCGG +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFGRASF*MARGRR
Trigger: CCGCCTGCCCCGGGCCATCCAGAAACTTGCTCTACC...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTCCACAATGTGGATGTaGCGCAGCGGGAAAAAGCGC +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLSTMWM*RSGKKR
Trigger: GCGCTTTTTCCCGCTGCGCCACATCCACATTGTGGA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCCTGCCAGGTTCAAGTaGTTCTCTTGCCTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSPARFK*FSCLSV
Trigger: GACACTGAGGCAAGAGAACCACTTGAACCTGGCAGG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTTCTGGACTATTTCCCTaGAGTGAGCAAGAATCCTTT +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAISGLFP*SEQESF
Trigger: AAAGGATTCTTGCTCACTCCAGGGAAATAGTCCAGA...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTCGTGCCCCAGCTTTATaGCAATTCCTCCATGAAGCC +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGARAPAL*QFLHEA
Trigger: GGCTTCATGGAGGAATTGCCATAAAGCTGGGGCACG...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCATCTGTTATGTTGCTCTaGCCTTTAACTCAGGCTCAG +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPSVMLL*PLTQAQ
Trigger: CTGAGCCTGAGTTAAAGGCCAGAGCAACATAACAGA...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTAGCAGGGGAGTGGGGTaGACAACATTTCTCAGGCAT +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGASRGVG*TTFLRH
Trigger: ATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCACACAGACAGCTATTTTaGGTTGGGGGCAAGTTAATT +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPHRQLF*VGGKLI
Trigger: AATTAACTTGCCCCCAACTCAAAATAGCTGTCTGTG...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCACCTACTTTATCTCATTaGGTTGGAGTTTTCCCCCAA +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPPTLSH*VGVFPQ
Trigger: TTGGGGGAAAACTCCAACTCAATGAGATAAAGTAGG...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTATGGTCTGCGGCAACTaGTGGGCAGAGCCGTTTGGG +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFMVCGN*WAEPFG
Trigger: CCCAAACGGCTCTGCCCAGCAGTTGCCGCAGACCAT...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATCTTCCGAAATGAGCTaGTGCCGGTTAGGAGCATGT +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLSSEMS*CRLGAC
Trigger: ACATGCTCCTAACCGGCAGCAGCTCATTTCGGAAGA...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCACTTTTCTATTCTAATTaGCTTTCTGGAGGCCAGCTG +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPLFYSN*LSGGQL
Trigger: CAGCTGGCCTCCAGAAAGCCAATTAGAATAGAAAAG...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTCCATCTCCAACAAGCTaGCTGCTCAGGGGCAGAAGT +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFPSPTS*LLRGRS
Trigger: ACTTCTGCCCCTGAGCAGCCAGCTTGTTGGAGATGG...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTGTTCATGATATGGGGTaGGGCATAGGCCATGCTAAG +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSVHDMG*GIGHAK
Trigger: CTTAGCATGGCCTATGCCCCACCCCATATCATGAAC...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTCCATCTCCTTTCAGTTaGGTAAGCCTCCAAGCACAG +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAPSPFS*VSLQAQ
Trigger: CTGTGCTTGGAGGCTTACCCAACTGAAAGGAGATGG...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGAGTGTCCTGAGTAGCTaGGATTACAGGCACTCGCCA +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWSVLSS*DYRHSP
Trigger: TGGCGAGTGCCTGTAATCCCAGCTACTCAGGACACT...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTCACTGTGTGCTGTTTaGAGAACTCTGTTATGTTGC +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFSLCAV*RTLLCC
Trigger: GCAACATAACAGAGTTCTCCAAACAGCACACAGTGA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTACAGGCTTGGAAACTTaGCTTAACCTTGCTGGGCCC +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFTGLET*LNLAGP
Trigger: GGGCCCAGCAAGGTTAAGTCAAGTTTCCAAGCCTGT...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTGGCCCACAAGTTAAGTaGCCTGCCCTGACATGCGAC +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFGPQVK*PALTCD
Trigger: GTCGCATGTCAGGGCAGGTCACTTAACTTGTGGGCC...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTAATAACTCCGTGGGTTaGTCACGTTATACATGTAAA +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAINNSVG*SRYTCK
Trigger: TTTACATGTATAACGTGATCAACCCACGGAGTTATT...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTCTCCAACAAGCTGGCTaGTCAGGGGCAGAAGTAAAA +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAILQQAG*SGAEVK
Trigger: TTTTACTTCTGCCCCTGAGCAGCCAGCTTGTTGGAG...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTTCCATAATAATATCTaGATCCTGGGGTTGCTTGGA +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFFHNNI*ILGLLG
Trigger: TCCAAGCAACCCCAGGATGCAGATATTATTATGGAA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTTGTTCAGAATGCCCTaGTCTGGTGACACTACTGCC +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLLFRMP*SGDTTA
Trigger: GGCAGTAGTGTCACCAGAGCAGGGCATTCTGAACAA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTACTCAGACAAATCTCTTaGCTACCTCTACCCTCTACC +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLLRQIS*LPLPST
Trigger: GGTAGAGGGTAGAGGTAGGCAAGAGATTTGTCTGAG...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTATAGACAGATGCATATaGTTTATATCTTCCTCCACT +
Preference number: 4 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCIDRCI*FISSST
Trigger: AGTGGAGGAAGATATAAAGCATATGCATCTGTCTAT...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTCCAGGAACTCCTCGATaGACGGGTAGGGCTTGTGCT +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFPGTPR*TGRACA
Trigger: AGCACAAGCCCTACCCGTCCATCGAGGAGTTCCTGG...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCCTGATCATTTTACACTaGACCACCGCCTCCATCGAC +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLLIILH*TTASID
Trigger: GTCGATGGAGGCGGTGGTCCAGTGTAAAATGATCAG...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAATGGCTCTATCAACATaGGCAAGCCCTTTAATTTCT +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPMALST*ASPLIS
Trigger: AGAAATTAAAGGGCTTGCCCATGTTGATAGAGCCAT...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGAGGAAAGCAGGGGAGTaGGGTGGACAACATTTCTCA +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWRKAGE*GGQHFS
Trigger: TGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCT...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTTGTGACCTCCAAAAATaGCAAGGAATCGCCGAGGAG +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFCDLQK*QGIAEE
Trigger: CTCCTCGGCGATTCCTTGTCATTTTTGGAGGTCACA...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTTTCCTCTGGGGGAGATaGTGGCTTAATGACAACTTC +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAIFLWGR*WLNDNF
Trigger: GAAGTTGTCATTAAGCCATCATCTCCCCCAGAGGAA...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTTTAAGTGACCTGCCCTaGCATGCGACCTCTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFLSDLP*HATSGK
Trigger: CTTCCCAGAGGTCGCATGTCAGGGCAGGTCACTTAA...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCCCGATGATGATGGTCTaGGGCAACTGCTGGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSPMMMV*GNCWAE
Trigger: CTCTGCCCAGCAGTTGCCGCAGACCATCATCATCGG...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTGCCAGTCAAATGTTCTaGCAACAAGCTCGAAGAACT +
Preference number: 4 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAASQMF*QQARRT
Trigger: AGTTCTTCGAGCTTGTTGGCAGAACATTTGACTGGC...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTTTTCTGGAGGCCAGCTaGCACCTGGGGCAAAGTATC +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFFLEAS*HLGQSI
Trigger: GATACTTTGCCCCAGGTGGCAGCTGGCCTCCAGAAA...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
47% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTGTCAGAGACTCTCATTaGAGTTTCCTTTCAGTCACC +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSVRDSH*SFLSVT
Trigger: GGTGACTGAAAGGAAACTGCAATGAGAGTCTCTGAC...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTGCATCCACAGTTCATaGTTCTACCAGACCATCCCT +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLCIHSS*FYQTIP
Trigger: AGGGATGGTCTGGTAGAAGCATGAACTGTGGATGCA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTTTAACACATTTGACATaGCACTCAGACAAATCTCTT +
Preference number: 4 (lower is better)
Translates to: PCSGDTTAIRACPSFMAILTHLT*HSDKSL
Trigger: AAGAGATTTGTCTGAGTGGCATGTCAAATGTGTTAA...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGTCCGAAATGAGCTGCTaGCGGTTAGGAGCATGTTTT +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWSEMSC*RLGACF
Trigger: AAAACATGCTCCTAACCGGCAGCAGCTCATTTCGGA...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCATAATATCTGCATCCTaGGGTTGCTTGGAGAAATTT +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFIISAS*GCLEKF
Trigger: AAATTTCTCCAAGCAACCCCAGGATGCAGATATTAT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCAACACTCCAGCCTTaGAAAGCAGTAGCTTCTCAT +
Preference number: 4 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGPTLQP*KAVASH
Trigger: ATGAGAAGCTACTGCTTTCCAAGGCTGGAGTGTTGG...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAGGATTCCTGTTTTCTTaGGAAACACATTTACTGAGA +
Preference number: 4 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPGFLFS*ETHLLR
Trigger: TCTCAGTAAATGTGTTTCCCAAGAAAACAGGAATCC...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp GTGAAGCAGCTAAATCCGATGATGTCCTCTTTAGCTTaGGCCTTCTCTCACTGTGTGCTGTTTGGAGAACTC +
Preference number: 4 (lower is better)
Translates to: VKQLNPMMSSLA*AFSHCVLFGEL
Trigger: GAGTTCTCCAAACAGCACACAGTGAGAGAAGGCCAAAGCTAAAGAGGACATCATCGGATTTAGCTGCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGCAAACCTTCAGGTTGTaGGCTGATAACCAAATGGTG +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWQTFRL*ADNQMV
Trigger: CACCATTTGGTTATCAGCTCACAACCTGAAGGTTTG...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGGAATGTTGCTGAACTaGATGCCAAACCATGGAACA +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLGMLLN*MPNHGT
Trigger: TGTTCCATGGTTTGGCATTCAGTTCAGCAACATTCC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTCTGGTCTTGAACTCCTaGCCTCGTGATTCACCTGTC +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFLVLNS*PRDSPV
Trigger: GACAGGTGAATCACGAGGTCAGGAGTTCAAGACCAG...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATGCTGTAAATATTTCTaGTACTTCCTCTGGGGGAGA +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLCCKYF*YFLWGR
Trigger: TCTCCCCCAGAGGAAGTAGCAGAAATATTTACAGCA...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTTGTCCACCAGGGGCCTaGTGTAAATATTTCTGCTAC +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFCPPGA*CKYFCY
Trigger: GTAGCAGAAATATTTACAGCAGGCCCCTGGTGGACA...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCCACTACTGCCATTCGTaGGTGCCCCAGCTTTATGGC +
Preference number: 4 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSHYCHS*VPQLYG
Trigger: GCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTG...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCCCAAATTCACATGGGTaGCTGCTAAGTAAGCTTCCA +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLPNSHG*LLSKLP
Trigger: TGGAAGCTTACTTAGCAGGCACCCATGTGAATTTGG...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCTGCCTAATAGACAGATaGATATGCTTTATATCTTCC +
Preference number: 4 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFCLIDR*ICFISS
Trigger: GGAAGATATAAAGCATATGCATCTGTCTATTAGGCA...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCGCTCTGAGCATGAGTTaGACCAGAGGTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSALSMS*TRGCPA
Trigger: GGCAGGACAACCTCTGGTGCAACTCATGCTCAGAGC...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTTACCTTCTCAATGACTaGCTGGGGTTGTACCAAAAA +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSYLLND*LGLYQK
Trigger: TTTTTGGTACAACCCCAGCCAGTCATTGAGAAGGTA...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp GTAGCCTCTAAGCCTGAGTTTATAGTCAATGTGACCTaGGGCAAGTTTCTCATGTTCTCTGGGCCTAATTCC +
Preference number: 4 (lower is better)
Translates to: VASKPEFIVNVT*GKFLMFSGPNS
Trigger: GGAATTAGGCCCAGAGAACATGAGAAACTTGCCCAAGGTCACATTGACTATAAACTCAGGCTTAGAGGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp ATCACGTCCCTGTTGCATCAAATCCCAGCCACTGCTTaGCTTGAAGGTAATCTTGATATCACCCTAACTGTC +
Preference number: 4 (lower is better)
Translates to: ITSLLHQIPATA*LEGNLDITLTV
Trigger: GACAGTTAGGGTGATATCAAGATTACCTTCAAGCAAAGCAGTGGCTGGGATTTGATGCAACAGGGACGTGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTTGTGCAAATATTCTTTaGGGTCAAGATGGATCCCAA +
Preference number: 4 (lower is better)
Translates to: KARSNDVLQREALCLLKSCANIL*GQDGSQ
Trigger: TTGGGATCCATCTTGACCTCAAAGAATATTTGCACA...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGTATAAGGGGGCTAGTTaGTTTCTCTCAGGAATGTTG +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWYKGAS*FLSGML
Trigger: CAACATTCCTGAGAGAAATCAACTAGCCCCCTTATA...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGACTATTTCCCTGGAGTaGGCAAGAATCCTTTCTTCT +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWTISLE*ARILSS
Trigger: AGAAGAAAGGATTCTTGCTCACTCCAGGGAAATAGT...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCACAGCTAAATGTCTTTaGCTTTGTACTCCAAGACCC +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLTAKCL*LCTPRP
Trigger: GGGTCTTGGAGTACAAAGGCAAAGACATTTAGCTGT...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTACTGCCATTCGTGCGTaGCCCAGCTTTATGGCAATT +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFTAIRA*PSFMAI
Trigger: AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGT...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTTGCAACAGATACACCTaGACAGGAGCCAAATTCACA +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFCNRYT*TGAKFT
Trigger: TGTGAATTTGGCTCCTGTGCAGGTGTATCTGTTGCA...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTCTAGTCAGTGGCACATaGGCGTTTCAGGCCTTCAAT +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFLVSGT*AFQAFN
Trigger: ATTGAAGGCCTGAAACGCCCATGTGCCACTGACTAG...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAAGGATGGAAGATATTTaGCACCTGGGAAGAAATGTT +
Preference number: 4 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLRMEDI*HLGRNV
Trigger: AACATTTCTTCCCAGGTGCCAAATATCTTCCATCCT...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTACACACCTCTTAGGATaGAAGATATTTGGCACCTGG +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFTHLLG*KIFGTW
Trigger: CCAGGTGCCAAATATCTTCCATCCTAAGAGGTGTGT...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTTGCCCTTCCTGTATCTaGGACACACCTCTTAGGATG +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFCPSCI*DTPLRM
Trigger: CATCCTAAGAGGTGTGTCCCAGATACAGGAAGGGCA...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGCTGACATGCGACCTCTaGGAAGATTCTCTATTTCTT +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWLTCDL*EDSLFL
Trigger: AAGAAATAGAGAATCTTCCCAGAGGTCGCATGTCAG...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
3UTR CAA 72 bp CATATTCCTGAACAGGCTTGGAAACTTGACTTAACCTaGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGA +
Preference number: 4 (lower is better)
Translates to: HIPEQAWKLDLT*LGPLISSALQG
Trigger: TCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAGTTTCCAAGCCTGTTCAGGAATATG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTAGGCTCTCTGCCTATTaGAAAGTACCATGTCCACCA +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFRLSAY*KVPCPP
Trigger: TGGTGGACATGGTACTTTTCAATAGGCAGAGAGCCT...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTTTGACAGTGCTTGGTaGGATCTAGCAATAAATACC +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLFDSAW*DLAINT
Trigger: GGTATTTATTGCTAGATCTCACCAAGCACTGTCAAA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGATTTCTGTCATTTTCCTaGGGTATAAACCATGTCAGG +
Preference number: 4 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGFLSFS*GINHVR
Trigger: CCTGACATGGTTTATACCGCAGGAAAATGACAGAAA...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTTTATCACGTCCCTGTTaGATCAAATCCCAGCCACTG +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFLSRPC*IKSQPL
Trigger: CAGTGGCTGGGATTTGATGCAACAGGGACGTGATAA...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTCTGGCTCTCTCTCTTTaGTGTTATCTAACTGAGAAA +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAILALSL*CYLTEK
Trigger: TTTCTCAGTTAGATAACAGCAAAGAGAGAGAGCCAG...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTTCTCAATGACTGGCTaGGGTTGTACCAAAAATGAA +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLFSMTG*GCTKNE
Trigger: TTCATTTTTGGTACAACCCCAGCCAGTCATTGAGAA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGTAGAAGGCATGTTTTaGAGGGACCGGGTGCTATTA +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFVEGMF*RDRVLL
Trigger: TAATAGCACCCGGTCCCTCCAAAACATGCCTTCTAC...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGTTATGGAGAAGGAAATaGAGGTTCTCAGAGTCTGAA +
Preference number: 4 (lower is better)
Translates to: LDLTLLGPLISSALQGVWLWRRK*RFSESE
Trigger: TTCAGACTCTGAGAACCTCCATTTCCTTCTCCATAA...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCTTTATCTCATTGAGTTaGAGTTTTCCCCCAACAGAG +
Preference number: 4 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLFISLS*SFPPTE
Trigger: CTCTGTTGGGGGAAAACTCCAACTCAATGAGATAAA...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCAGAAGTTCGAAGCATTaGTCTGCGGCGACAGCTTTA +
Preference number: 4 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSRSSKH*SAATAL
Trigger: TAAAGCTGTCGCCGCAGATCAATGCTTCGAACTTCT...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTAATGTGGGAAAAGGATaGAGTTTCGGAAGAAATAAG +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAINVGKG*SFGRNK
Trigger: CTTATTTCTTCCGAAACTTCATCCTTTTCCCACATT...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTATTCCTGAACAGGCTTaGAAACTTGACTTAACCTTG +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFIPEQA*KLDLTL
Trigger: CAAGGTTAAGTCAAGTTTCCAAGCCTGTTCAGGAAT...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCCGCATTTCTGCCGACTaGTTCAAAACCAGTTTTGGT +
Preference number: 4 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSRISAD*FKTSFG
Trigger: ACCAAAACTGGTTTTGAACCAGTCGGCAGAAATGCG...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTTACCTTCATATTTGTTaGGCCCAGAATTGTTTTATG +
Preference number: 4 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAIYLHIC*AQNCFM
Trigger: CATAAAACAATTCTGGGCCCAACAAATATGAAGGTA...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTATTCGTGCAGTTTATTaGGTAGTTTGGGATCGACTT +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFIRAVY*VVWDRL
Trigger: AAGTCGATCCCAAACTACTCAATAAACTGCACGAAT...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR TCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTTGTACCAAAAATGAATaGACAGATAGTGCCACTAGG +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFCTKNE*TDSATR
Trigger: CCTAGTGGCACTATCTGTTCATTCATTTTTGGTACA...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTCTTATTGCAAATCAGTaGCAGTCAAATGTTCTGCCA +
Preference number: 4 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFLIANQ*QSNVLP
Trigger: TGGCAGAACATTTGACTGGCACTGATTTGCAATAAG...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CCA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTATTCTAATAACTCCGTaGGTTGATCACGTTATACAT +
Preference number: 4 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFILITP*VDHVIH
Trigger: ATGTATAACGTGATCAACCCACGGAGTTATTAGAAT...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR GCA 90 bp CCATTTCTGTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTAATTTACAGGCAGTTTaGAAAGAGCATCTTCTTCAG +
Preference number: 4 (lower is better)
Translates to: PFLSFSCGINHVRKPVYFNLQAV*KEHLLQ
Trigger: CTGAAGAAGATGCTCTTTGCAAACTGCCTGTAAATT...AAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGACAGAAATGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS TCA 90 bp GGATGGCCCGGGGCAGGCGGGCGGGGAGAAGGCGCAGGCACCCACTaGGACCCGGCTGTCGTGGCGGCGACTCCTGGCTGCCAGGGCGCA +
Preference number: 5 (lower is better)
Translates to: GWPGAGGRGEGAGTH*DPAVVAATPGCQGA
Trigger: TGCGCCCTGGCAGCCAGGAGTCGCCGCCACGACAGCCGGGTCTCAGTGGGTGCCTGCGCCTTCTCCCCGCCCGCCTGCCCCGGGCCATCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS GCA 90 bp GGGGCTGGGCCACCAGCAGCACCGCGCCCAGGAGCAGCGCGGCCATaGTGGACACCACGGTGGCTTCACTGGGCCGCGCGCCGCTGGGTC +
Preference number: 5 (lower is better)
Translates to: GAGPPAAPRPGAARP*WTPRWLHWAARRWV
Trigger: GACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGGTGGCCCAGCCCC
77% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp GCTGGGCCACCAGCAGCACCGCGCCCAGGAGCAGCGCGGCCATGCTaGACACCACGGTGGCTTCACTGGGCCGCGCGCCGCTGGGTCATG +
Preference number: 5 (lower is better)
Translates to: AGPPAAPRPGAARPC*TPRWLHWAARRWVM
Trigger: CATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGGTGGCCCAGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp TCCTGCTGGCCTAGCTCGGCGGGGCGGGAAGGCACTAGCTGGGGCTaGGCCACCAGCAGCACCGCGCCCAGGAGCAGCGCGGCCATGCTG +
Preference number: 5 (lower is better)
Translates to: SCWPSSAGREGTSWG*ATSSTAPRSSAAML
Trigger: CAGCATGGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGGTGGCCCAGCCCCAGCTAGTGCCTTCCCGCCCCGCCGAGCTAGGCCAGCAGGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp AGAAGCTCCTGCTGGCCTAGCTCGGCGGGGCGGGAAGGCACTAGCTaGGGCTGGGCCACCAGCAGCACCGCGCCCAGGAGCAGCGCGGCC +
Preference number: 5 (lower is better)
Translates to: RSSCWPSSAGREGTS*GWATSSTAPRSSAA
Trigger: GGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGGTGGCCCAGCCCCAGCTAGTGCCTTCCCGCCCCGCCGAGCTAGGCCAGCAGGAGCTTCT
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp GCAGCACCGCGCCCAGGAGCAGCGCGGCCATGCTGGACACCACGGTaGCTTCACTGGGCCGCGCGCCGCTGGGTCATGAAGTGCCGCAGC +
Preference number: 5 (lower is better)
Translates to: AAPRPGAARPCWTPR*LHWAARRWVMKCRS
Trigger: GCTGCGGCACTTCATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCGCGGTGCTGC
73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp CATGGGCAGCACTGCCGAGCACCCGCGGCGGGTAGAGCAAGTTTCTaGATGGCCCGGGGCAGGCGGGCGGGGAGAAGGCGCAGGCACCCA +
Preference number: 5 (lower is better)
Translates to: HGQHCRAPAAGRASF*MARGRRAGRRRRHP
Trigger: TGGGTGCCTGCGCCTTCTCCCCGCCCGCCTGCCCCGGGCCATCCAGAAACTTGCTCTACCCGCCGCGGGTGCTCGGCAGTGCTGCCCATG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 90 bp CGCCCAGGAGCAGCGCGGCCATGCTGGACACCACGGTGGCTTCACTaGGCCGCGCGCCGCTGGGTCATGAAGTGCCGCAGCAGGGAAGCC +
Preference number: 5 (lower is better)
Translates to: RPGAARPCWTPRWLH*AARRWVMKCRSREA
Trigger: GGCTTCCCTGCTGCGGCACTTCATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp GGAAGCAGGAGGTGCCATCCTCTCCAATTCGCTCTGCAGCCGGACTaGGACCGGAGCGGCGGCCTGGGCCAGAATCCGCGTGAGGAGCCG +
Preference number: 5 (lower is better)
Translates to: GSRRCHPLQFALQPD*DRSGGLGQNPREEP
Trigger: CGGCTCCTCACGCGGATTCTGGCCCAGGCCGCCGCTCCGGTCCCAGTCCGGCTGCAGAGCGAATTGGAGAGGATGGCACCTCCTGCTTCC
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510712.1
CDS TCA 90 bp GCTGGACACCACGGTGGCTTCACTGGGCCGCGCGCCGCTGGGTCATaGAGTGCCGCAGCAGGGAAGCCTCCTAGTCAGTGGCACATGGGC +
Preference number: 5 (lower is better)
Translates to: AGHHGGFTGPRAAGS*SAAAGKPPSQWHMG
Trigger: GCCCATGTGCCACTGACTAGGAGGCTTCCCTGCTGCGGCACTTCATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp TGCTGGGCAGAGCCGTTTGGGGCCACGCCATCGCGGACGTCATCCTaGAGGGTCCCCGCTTTCCGCAGAAGCTCCTGCTGGCCTAGCTCG +
Preference number: 5 (lower is better)
Translates to: CWAEPFGATPSRTSS*RVPAFRRSSCWPSS
Trigger: CGAGCTAGGCCAGCAGGAGCTTCTGCGGAAAGCGGGGACCCTCCAGGATGACGTCCGCGATGGCGTGGCCCCAAACGGCTCTGCCCAGCA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 90 bp CTCTCCAATTCGCTCTGCAGCCGGACTGGGACCGGAGCGGCGGCCTaGGCCAGAATCCGCGTGAGGAGCCGGCTTCAAAGAGCGCCCTGT +
Preference number: 5 (lower is better)
Translates to: LSNSLCSRTGTGAAA*ARIRVRSRLQRAPC
Trigger: ACAGGGCGCTCTTTGAAGCCGGCTCCTCACGCGGATTCTGGCCCAGGCCGCCGCTCCGGTCCCAGTCCGGCTGCAGAGCGAATTGGAGAG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510712.1
CDS CCA 90 bp GGGCGACGTGAAATACGCGGGGGTCTTCTCCACTGTGAGCTGGTGTaGCCAGGAGAAGGGCATCTGGCTGAGGTACCAGCCCAAGCCGTG +
Preference number: 5 (lower is better)
Translates to: GRREIRGGLLHCELV*PGEGHLAEVPAQAV
Trigger: CACGGCTTGGGCTGGTACCTCAGCCAGATGCCCTTCTCCTGGCCACACCAGCTCACAGTGGAGAAGACCCCCGCGTATTTCACGTCGCCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS TCA 90 bp CTTGGGTGTAGTCAGATAGCACGCGCTCCGACGGGTCTCGCAGGATaGGCAGCAGCCGGATGGACGGGTTCATGCTGTAGACTCGCTCAG +
Preference number: 5 (lower is better)
Translates to: LGCSQIARAPTGLAG*AAAGWTGSCCRLAQ
Trigger: CTGAGCGAGTCTACAGCATGAACCCGTCCATCCGGCTGCTGCTCATCCTGCGAGACCCGTCGGAGCGCGTGCTATCTGACTACACCCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCGCTGGGCAGAGCCGTTaGGGGCCACGCCATCGCGGA +
Preference number: 5 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFAGQSR*GPRHRG
Trigger: TCCGCGATGGCGTGGCCCCAAACGGCTCTGCCCAGC...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 90 bp ACTTTGGGCGACGTGAAATACGCGGGGGTCTTCTCCACTGTGAGCTaGTGTGGCCAGGAGAAGGGCATCTGGCTGAGGTACCAGCCCAAG +
Preference number: 5 (lower is better)
Translates to: TLGDVKYAGVFSTVS*CGQEKGIWLRYQPK
Trigger: CTTGGGCTGGTACCTCAGCCAGATGCCCTTCTCCTGGCCACACCAGCTCACAGTGGAGAAGACCCCCGCGTATTTCACGTCGCCCAAAGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 90 bp GGTCATGAAGTGCCGCAGCAGGGAAGCCTCCTAGTCAGTGGCACATaGGCGTTTCAGGCCTTCAATTACTTAGGCGCTGGCGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: GHEVPQQGSLLVSGT*AFQAFNYLGAGAPS
Trigger: GGAAGGAGCGCCAGCGCCTAAGTAATTGAAGGCCTGAAACGCCCATGTGCCACTGACTAGGAGGCTTCCCTGCTGCGGCACTTCATGACC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510712.1
CDS CCA 90 bp GAAGCATTGATCTGCGGCGACAGCTTTAGGAACCTCTCGACCTTTTaGATCTCAGGGAAGGGGTCCCTGATGAGGCGGTCGCCGTCCACA +
Preference number: 5 (lower is better)
Translates to: EALICGDSFRNLSTF*ISGKGSLMRRSPST
Trigger: TGTGGACGGCGACCGCCTCATCAGGGACCCCTTCCCTGAGATCCAAAAGGTCGAGAGGTTCCTAAAGCTGTCGCCGCAGATCAATGCTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS GCA 90 bp AAATATTCGTGCAGTTTATTGAGTAGTTTGGGATCGACTTGGGGGTaGGCCCGGCCTTTGGACTCATGTAAGCAGCGGTCCCGGCCGCTG +
Preference number: 5 (lower is better)
Translates to: KYSCSLLSSLGSTWG*ARPLDSCKQRSRPL
Trigger: CAGCGGCCGGGACCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACTACTCAATAAACTGCACGAATATTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCACTCGCTCAGGCACTTaGGGCGACGTGAAATACGCG +
Preference number: 5 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFTRSGT*GDVKYA
Trigger: CGCGTATTTCACGTCGCCCAAAGTGCCTGAGCGAGT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGGGTGCGCCCGGCCTTaGGACTCATGTAAGCAGCGG +
Preference number: 5 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLGCARP*DSCKQR
Trigger: CCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACCC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCAATCCCAGCCACTGCTTaGCTTGAAGGTAATCTTGAT +
Preference number: 5 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPIPATA*LEGNLD
Trigger: ATCAAGATTACCTTCAAGCAAAGCAGTGGCTGGGAT...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCACTAGCAATAAATACCTaGGGTAAGTCTGGAGTGATG +
Preference number: 5 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPLAINT*GKSGVM
Trigger: CATCACTCCAGACTTACCCAAGGTATTTATTGCTAG...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCAGGTAGAAGGCATGTTTaGGAGGGACCGGGTGCTATT +
Preference number: 5 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPGRRHV*EGPGAI
Trigger: AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACC...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTCCTGCCTGGAGGCAATGAGGGTGGACTGTTACCCTACTACCCCCATGCCCCATATTCGTGCAGTTTATaGAGTAGTTTGGGATCGACT +
Preference number: 5 (lower is better)
Translates to: VLPGGNEGGLLPYYPHAPYSCSL*SSLGST
Trigger: AGTCGATCCCAAACTACTCAATAAACTGCACGAATA...TGGGGCATGGGGGTAGTAGGGTAACAGTCCACCCTCATTGCCTCCAGGCAGGAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGGAGGCTCTCTGCCTATaGAAAAGTACCATGTCCACC +
Preference number: 5 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCREALCL*KSTMST
Trigger: GGTGGACATGGTACTTTTCAATAGGCAGAGAGCCTC...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCAGGACCTCTGATCCCTaGCTCATGGTAGACTCATTT +
Preference number: 5 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFRTSDP*LMVDSF
Trigger: AAATGAGTCTACCATGAGCAAGGGATCAGAGGTCCT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCATGTCCTCTTTAGCTTaGGCCTTCTCTCACTGTGTG +
Preference number: 5 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFMSSLA*AFSHCV
Trigger: CACACAGTGAGAGAAGGCCAAAGCTAAAGAGGACAT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GAGCATGAGTTGCACCAGAGGTTGTCCTGCCTGGAGGCAATGAGGGTGGACTGTACCTACTTTATCTCATaGAGTTGGAGTTTTCCCCCA +
Preference number: 5 (lower is better)
Translates to: EHELHQRLSCLEAMRVDCTYFIS*SWSFPP
Trigger: TGGGGGAAAACTCCAACTCAATGAGATAAAGTAGGT...ACAGTCCACCCTCATTGCCTCCAGGCAGGACAACCTCTGGTGCAACTCATGCTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTATTGAACCTCTCGACCTTTaGGATCTCAGGGAAGGGGTC +
Preference number: 5 (lower is better)
Translates to: VSVNGIGRRHVLEGPGAIEPLDL*DLREGV
Trigger: GACCCCTTCCCTGAGATCCAAAAGGTCGAGAGGTTC...AATAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCAGTCAGAGACTCTCATaGCAGTTTCCTTTCAGTCAC +
Preference number: 5 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFSQRLS*QFPFSH
Trigger: GTGACTGAAAGGAAACTGCAATGAGAGTCTCTGACT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp TCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTCCTCCACTCACTGTGTGCTGTTaGGAGAACTCTGTTATGTTG +
Preference number: 5 (lower is better)
Translates to: SGDTTAIRACPSFMAIPPLTVCC*ENSVML
Trigger: CAACATAACAGAGTTCTCCAAACAGCACACAGTGAG...TGGAGGAATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCTAACCCTAGGAAAGCAGGGGAGTGGGGTGGACAACATTTCTCAGGCATCTTCAAACTTGACTTAACCTaGCTGGGCCCTCTTATTTCT +
Preference number: 5 (lower is better)
Translates to: PNPRKAGEWGGQHFSGIFKLDLT*LGPLIS
Trigger: AGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAGTTT...GAAGATGCCTGAGAAATGTTGTCCACCCCACTCCCCTGCTTTCCTAGGGTTAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGACCGGGTGCTAGGGCCTCCTTTGAATTaGACAGTGCTTGGTGAGATC +
Preference number: 5 (lower is better)
Translates to: LSLLMELVEGMFWRDRVLGPPLN*TVLGEI
Trigger: GATCTCACCAAGCACTGTCAAATTCAAAGGAGGCCC...TAGCACCCGGTCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCCTGCTCTGGTGACACTACTGCCATTCGTGCGTGCCCCAGCTTTATGGCAATTTCTCTGTTAATGGAATaGGTAGAAGGCATGTTTTGG +
Preference number: 5 (lower is better)
Translates to: PCSGDTTAIRACPSFMAISLLME*VEGMFW
Trigger: CCAAAACATGCCTTCTACCAATTCCATTAACAGAGA...AATTGCCATAAAGCTGGGGCACGCACGAATGGCAGTAGTGTCACCAGAGCAGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTTCAGTTGTTCTCACTaGCCTCTCTGGAAGGACCCA +
Preference number: 5 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAFSCSH*PLWKDP
Trigger: TGGGTCCTTCCAGAGAGGCAAGTGAGAACAACTGAA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp ATGTTGCTCTGGCCTTTAACTCAGGCTCAGTCTTCCGAAATGAGCTGCTGCCGGCAGCCACTGCTTTGCTaGAAGGTAATCTTGATATCA +
Preference number: 5 (lower is better)
Translates to: MLLWPLTQAQSSEMSCCRQPLLC*KVILIS
Trigger: TGATATCAAGATTACCTTCAAGCAAAGCAGTGGCTG...CCGGCAGCAGCTCATTTCGGAAGACTGAGCCTGAGTTAAAGGCCAGAGCAACAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTAGTTTATTGAGTAGTTaGGGATCGACTTGGGGGTGC +
Preference number: 5 (lower is better)
Translates to: VKVQFQEKSSLSLISRGASLLSS*GSTWGC
Trigger: GCACCCCCAAGTCGATCCCAAACTACTCAATAAACT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGAATGCAGGCTTCTTCTaGCCCTTCCTGTATCTGGGA +
Preference number: 5 (lower is better)
Translates to: LDLTLLGPLISSALQGVWNAGFF*PFLYLG
Trigger: TCCCAGATACAGGAAGGGCAAGAAGAAGCCTGCATT...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGATCCATCTCCTTTCAGTaGGGTAAGCCTCCAAGCACA +
Preference number: 5 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGSISFQ*GKPPST
Trigger: TGTGCTTGGAGGCTTACCCAACTGAAAGGAGATGGA...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CTTGACTTAACCTTGCTGGGCCCTCTTATTTCTTCAGCTCTTCAAGGAGTATGGTGTCTCAAGCTTCCCTaGTTCAGAATGCCCTGCTCT +
Preference number: 5 (lower is better)
Translates to: LDLTLLGPLISSALQGVWCLKLP*FRMPCS
Trigger: AGAGCAGGGCATTCTGAACAAGGGAAGCTTGAGACA...CCATACTCCTTGAAGAGCTGAAGAAATAAGAGGGCCCAGCAAGGTTAAGTCAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTTTATCACGTCCCTGTaGCATCAAATCCCAGCCACT +
Preference number: 5 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAFITSL*HQIPAT
Trigger: AGTGGCTGGGATTTGATGCAACAGGGACGTGATAAA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTATCTGCATCCTGGGGTaGCTTGGAGAAATTTCAATG +
Preference number: 5 (lower is better)
Translates to: VKVQFQEKSSLSLISRGAICILG*LGEISM
Trigger: CATTGAAATTTCTCCAAGCAACCCCAGGATGCAGAT...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTAAAAGTACAGTTTCAGGAGAAGTCTAGCCTCAGCCTGATCTCACGAGGAGCTTCTGAGCTTAGCTTATaGCAAATCAGTGCCAGTCAA +
Preference number: 5 (lower is better)
Translates to: VKVQFQEKSSLSLISRGASELSL*QISASQ
Trigger: TTGACTGGCACTGATTTGCAATAAGCTAAGCTCAGA...AGCTCCTCGTGAGATCAGGCTGAGGCTAGACTTCTCCTGAAACTGTACTTTTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTCTTTATCTCATTGAGTaGGAGTTTTCCCCCAACAGA +
Preference number: 5 (lower is better)
Translates to: KARSNDVLQREALCLLKSLYLIE*EFSPNR
Trigger: TCTGTTGGGGGAAAACTCCAACTCAATGAGATAAAG...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp CCACTGACACCTGTCTCTGTTAATGGAATTGGTAGAAGGCATGTTTTGGAGGGAACACAGACAGCTATTTaGAGTTGGGGGCAAGTTAAT +
Preference number: 5 (lower is better)
Translates to: PLTPVSVNGIGRRHVLEGTQTAI*SWGQVN
Trigger: ATTAACTTGCCCCCAACTCAAAATAGCTGTCTGTGT...TCCCTCCAAAACATGCCTTCTACCAATTCCATTAACAGAGACAGGTGTCAGTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTGGAAGCCGGTTTATTTaGCTTGTTTGTATTTTCTCT +
Preference number: 5 (lower is better)
Translates to: KARSNDVLQREALCLLKSGSRFI*LVCIFS
Trigger: AGAGAAAATACAAACAAGCAAAATAAACCGGCTTCC...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GTCATTTTCCTGCGGTATAAACCATGTCAGGAAGCCGGTTTATTTTGCTTGTTTACTACAGGGCCTCCTTaGAATTTGACAGTGCTTGGT +
Preference number: 5 (lower is better)
Translates to: VIFLRYKPCQEAGLFCLFTTGPP*NLTVLG
Trigger: ACCAAGCACTGTCAAATTCAAAGGAGGCCCTGTAGT...AAACAAGCAAAATAAACCGGCTTCCTGACATGGTTTATACCGCAGGAAAATGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp AAAGCAAGATCCAACGATGTGCTGCAGAGGGAGGCTCTCTGCCTATTGAAAAGTTTGAGTTTAACACATTaGACATGCCACTCAGACAAA +
Preference number: 5 (lower is better)
Translates to: KARSNDVLQREALCLLKSLSLTH*TCHSDK
Trigger: TTTGTCTGAGTGGCATGTCAAATGTGTTAAACTCAA...ACTTTTCAATAGGCAGAGAGCCTCCCTCTGCAGCACATCGTTGGATCTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GCCAAACCATGGAACACATTCCCCCACCCATTCTATACACAGCTAAATGTCTTTGGGATTCCTGTTTTCTaGGGAAACACATTTACTGAG +
Preference number: 5 (lower is better)
Translates to: AKPWNTFPHPFYTQLNVFGIPVF*GNTFTE
Trigger: CTCAGTAAATGTGTTTCCCAAGAAAACAGGAATCCC...AAAGACATTTAGCTGTGTATAGAATGGGTGGGGGAATGTGTTCCATGGTTTGGC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCGCAATACCTTCATATTaGTTGGGCCCAGAATTGTTT +
Preference number: 5 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLAIPSY*LGPELF
Trigger: AAACAATTCTGGGCCCAACAAATATGAAGGTATTGC...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp ACCCTAACTGTCCAACTCCAAATCCTAGATGCCCATAATTTCCCTTACAGGCTCAGCAGTAGCTTCTCATaGAGTTTAACACATTTGACA +
Preference number: 5 (lower is better)
Translates to: TLTVQLQILDAHNFPYRLSSSFS*SLTHLT
Trigger: TGTCAAATGTGTTAAACTCAATGAGAAGCTACTGCT...GAGCCTGTAAGGGAAATTATGGGCATCTAGGATTTGGAGTTGGACAGTTAGGGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS GCA 90 bp TGTACACCAGAACTTACAGTAGGAAAGTTTCTGAGCTTAGCTTATTaGAAATCAGTGCCAGTCAAATGTTCTGCCAACAAGCTCGAAGAA +
Preference number: 5 (lower is better)
Translates to: CTPELTVGKFLSLAY*KSVPVKCSANKLEE
Trigger: TTCTTCGAGCTTGTTGGCAGAACATTTGACTGGCACTGATTTGCAATAAGCTAAGCTCAGAAACTTTCCTACTGTAAGTTCTGGTGTACA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS-3UTR CAA 90 bp GGTCATTTTCTACATCAAAACACTTTAGTGAAGCAGCTAAATCCGATGATGTCCGAGAACTCTGTTATGTaGCTCTGGCCTTTAACTCAG +
Preference number: 5 (lower is better)
Translates to: GHFLHQNTLVKQLNPMMSENSVM*LWPLTQ
Trigger: CTGAGTTAAAGGCCAGAGCAACATAACAGAGTTCTC...GGACATCATCGGATTTAGCTGCTTCACTAAAGTGTTTTGATGTAGAAAATGACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS TCA 90 bp TCAAATGTTCTGCCAACAAGCTCGAAGAACTTCTTATTTGGCTCATaGAAATATTCGTGCAGTTTATTGAGTAGTTTGGGATCGACTTGG +
Preference number: 5 (lower is better)
Translates to: SNVLPTSSKNFLFGS*KYSCSLLSSLGSTW
Trigger: CCAAGTCGATCCCAAACTACTCAATAAACTGCACGAATATTTTCATGAGCCAAATAAGAAGTTCTTCGAGCTTGTTGGCAGAACATTTGA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 72 bp CCAGCAGCACCGCGCCCAGGAGCAGCGCGGCCATGCTaGACACCACGGTGGCTTCACTGGGCCGCGCGCCGC +
Preference number: 6 (lower is better)
Translates to: PAAPRPGAARPC*TPRWLHWAARR
Trigger: GCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS GCA 72 bp CCACCAGCAGCACCGCGCCCAGGAGCAGCGCGGCCATaGTGGACACCACGGTGGCTTCACTGGGCCGCGCGC +
Preference number: 6 (lower is better)
Translates to: PPAAPRPGAARP*WTPRWLHWAAR
Trigger: GCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCGCGGTGCTGCTGGTGG
75% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 72 bp TGCTGGCCTAGCTCGGCGGGGCGGGAAGGCACTAGCTaGGGCTGGGCCACCAGCAGCACCGCGCCCAGGAGC +
Preference number: 6 (lower is better)
Translates to: CWPSSAGREGTS*GWATSSTAPRS
Trigger: GCTCCTGGGCGCGGTGCTGCTGGTGGCCCAGCCCCAGCTAGTGCCTTCCCGCCCCGCCGAGCTAGGCCAGCA
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 72 bp GCAGCGCGGCCATGCTGGACACCACGGTGGCTTCACTaGGCCGCGCGCCGCTGGGTCATGAAGTGCCGCAGC +
Preference number: 6 (lower is better)
Translates to: AARPCWTPRWLH*AARRWVMKCRS
Trigger: GCTGCGGCACTTCATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 72 bp CGCCCAGGAGCAGCGCGGCCATGCTGGACACCACGGTaGCTTCACTGGGCCGCGCGCCGCTGGGTCATGAAG +
Preference number: 6 (lower is better)
Translates to: RPGAARPCWTPR*LHWAARRWVMK
Trigger: CTTCATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTGGTGTCCAGCATGGCCGCGCTGCTCCTGGGCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS GCA 72 bp CGGGAAGCAGGAGGTGCCATCCTCTCCAATTCGCTCTaGAGCCGGACTGGGACCGGAGCGGCGGCCTGGGCC +
Preference number: 6 (lower is better)
Translates to: REAGGAILSNSL*SRTGTGAAAWA
Trigger: GGCCCAGGCCGCCGCTCCGGTCCCAGTCCGGCTGCAGAGCGAATTGGAGAGGATGGCACCTCCTGCTTCCCG
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510712.1
CDS CCA 72 bp TCCTGGAGGGTCCCCGCTTTCCGCAGAAGCTCCTGCTaGCCTAGCTCGGCGGGGCGGGAAGGCACTAGCTGG +
Preference number: 6 (lower is better)
Translates to: SWRVPAFRRSSC*PSSAGREGTSW
Trigger: CCAGCTAGTGCCTTCCCGCCCCGCCGAGCTAGGCCAGCAGGAGCTTCTGCGGAAAGCGGGGACCCTCCAGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS TCA 72 bp CACGGTGGCTTCACTGGGCCGCGCGCCGCTGGGTCATaGAGTGCCGCAGCAGGGAAGCCTCCTAGTCAGTGG +
Preference number: 6 (lower is better)
Translates to: HGGFTGPRAAGS*SAAAGKPPSQW
Trigger: CCACTGACTAGGAGGCTTCCCTGCTGCGGCACTTCATGACCCAGCGGCGCGCGGCCCAGTGAAGCCACCGTG
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS GCA 72 bp TCATCCTGGAGGGTCCCCGCTTTCCGCAGAAGCTCCTaGTGGCCTAGCTCGGCGGGGCGGGAAGGCACTAGC +
Preference number: 6 (lower is better)
Translates to: SSWRVPAFRRSS*WPSSAGREGTS
Trigger: GCTAGTGCCTTCCCGCCCCGCCGAGCTAGGCCAGCAGGAGCTTCTGCGGAAAGCGGGGACCCTCCAGGATGA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 72 bp GAGCCGTTTGGGGCCACGCCATCGCGGACGTCATCCTaGAGGGTCCCCGCTTTCCGCAGAAGCTCCTGCTGG +
Preference number: 6 (lower is better)
Translates to: EPFGATPSRTSS*RVPAFRRSSCW
Trigger: CCAGCAGGAGCTTCTGCGGAAAGCGGGGACCCTCCAGGATGACGTCCGCGATGGCGTGGCCCCAAACGGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 72 bp AGGTGCCATCCTCTCCAATTCGCTCTGCAGCCGGACTaGGACCGGAGCGGCGGCCTGGGCCAGAATCCGCGT +
Preference number: 6 (lower is better)
Translates to: RCHPLQFALQPD*DRSGGLGQNPR
Trigger: ACGCGGATTCTGGCCCAGGCCGCCGCTCCGGTCCCAGTCCGGCTGCAGAGCGAATTGGAGAGGATGGCACCT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510712.1
CDS CCA 72 bp GATGATGGTCTGCGGCAACTGCTGGGCAGAGCCGTTTaGGGCCACGCCATCGCGGACGTCATCCTGGAGGGT +
Preference number: 6 (lower is better)
Translates to: DDGLRQLLGRAV*GHAIADVILEG
Trigger: ACCCTCCAGGATGACGTCCGCGATGGCGTGGCCCCAAACGGCTCTGCCCAGCAGTTGCCGCAGACCATCATC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000002596.6
ENST00000510712.1
ENST00000514690.5
CDS CCA 72 bp GTAGTTTGGGATCGACTTGGGGGTGCGCCCGGCCTTTaGACTCATGTAAGCAGCGGTCCCGGCCGCTGTCCC +
Preference number: 6 (lower is better)
Translates to: VVWDRLGGAPGL*THVSSGPGRCP
Trigger: GGGACAGCGGCCGGGACCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACTAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CAA 72 bp AGTAGTTTGGGATCGACTTGGGGGTGCGCCCGGCCTTaGGACTCATGTAAGCAGCGGTCCCGGCCGCTGTCC +
Preference number: 6 (lower is better)
Translates to: SSLGSTWGCARP*DSCKQRSRPLS
Trigger: GGACAGCGGCCGGGACCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACTACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CAA 90 bp AGTTTATTGAGTAGTTTGGGATCGACTTGGGGGTGCGCCCGGCCTTaGGACTCATGTAAGCAGCGGTCCCGGCCGCTGTCCCGCAGGCAG +
Preference number: 6 (lower is better)
Translates to: SLLSSLGSTWGCARP*DSCKQRSRPLSRRQ
Trigger: CTGCCTGCGGGACAGCGGCCGGGACCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACTACTCAATAAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS TCA 72 bp AGTCAGATAGCACGCGCTCCGACGGGTCTCGCAGGATaGGCAGCAGCCGGATGGACGGGTTCATGCTGTAGA +
Preference number: 6 (lower is better)
Translates to: SQIARAPTGLAG*AAAGWTGSCCR
Trigger: TCTACAGCATGAACCCGTCCATCCGGCTGCTGCTCATCCTGCGAGACCCGTCGGAGCGCGTGCTATCTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 72 bp GAAATACGCGGGGGTCTTCTCCACTGTGAGCTGGTGTaGCCAGGAGAAGGGCATCTGGCTGAGGTACCAGCC +
Preference number: 6 (lower is better)
Translates to: EIRGGLLHCELV*PGEGHLAEVPA
Trigger: GGCTGGTACCTCAGCCAGATGCCCTTCTCCTGGCCACACCAGCTCACAGTGGAGAAGACCCCCGCGTATTTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 72 bp GACGTGAAATACGCGGGGGTCTTCTCCACTGTGAGCTaGTGTGGCCAGGAGAAGGGCATCTGGCTGAGGTAC +
Preference number: 6 (lower is better)
Translates to: DVKYAGVFSTVS*CGQEKGIWLRY
Trigger: GTACCTCAGCCAGATGCCCTTCTCCTGGCCACACCAGCTCACAGTGGAGAAGACCCCCGCGTATTTCACGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 72 bp GTGCCGCAGCAGGGAAGCCTCCTAGTCAGTGGCACATaGGCGTTTCAGGCCTTCAATTACTTAGGCGCTGGC +
Preference number: 6 (lower is better)
Translates to: VPQQGSLLVSGT*AFQAFNYLGAG
Trigger: GCCAGCGCCTAAGTAATTGAAGGCCTGAAACGCCCATGTGCCACTGACTAGGAGGCTTCCCTGCTGCGGCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000510712.1
CDS GCA 72 bp TGCAGTTTATTGAGTAGTTTGGGATCGACTTGGGGGTaGGCCCGGCCTTTGGACTCATGTAAGCAGCGGTCC +
Preference number: 6 (lower is better)
Translates to: CSLLSSLGSTWG*ARPLDSCKQRS
Trigger: GGACCGCTGCTTACATGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACTACTCAATAAACTGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CCA 72 bp TATTCGTGCAGTTTATTGAGTAGTTTGGGATCGACTTaGGGGTGCGCCCGGCCTTTGGACTCATGTAAGCAG +
Preference number: 6 (lower is better)
Translates to: YSCSLLSSLGST*GCARPLDSCKQ
Trigger: CTGCTTACATGAGTCCAAAGGCCGGGCGCACCCCCAAGTCGATCCCAAACTACTCAATAAACTGCACGAATA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS TCA 72 bp TCTTATTTGGCTCATGAAAATATTCGTGCAGTTTATTaGGTAGTTTGGGATCGACTTGGGGGTGCGCCCGGC +
Preference number: 6 (lower is better)
Translates to: SYLAHENIRAVY*VVWDRLGGAPG
Trigger: GCCGGGCGCACCCCCAAGTCGATCCCAAACTACTCAATAAACTGCACGAATATTTTCATGAGCCAAATAAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CAA 90 bp ATGTACACCAGAACTTACAGTAGGAAAGTTTCTGAGCTTAGCTTATaGCAAATCAGTGCCAGTCAAATGTTCTGCCAACAAGCTCGAAGA +
Preference number: 6 (lower is better)
Translates to: MYTRTYSRKVSELSL*QISASQMFCQQARR
Trigger: TCTTCGAGCTTGTTGGCAGAACATTTGACTGGCACTGATTTGCAATAAGCTAAGCTCAGAAACTTTCCTACTGTAAGTTCTGGTGTACAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS GCA 72 bp CTTAGCTTATTGCAAATCAGTGCCAGTCAAATGTTCTaGCAACAAGCTCGAAGAACTTCTTATTTGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LSLLQISASQMF*QQARRTSYLAH
Trigger: ATGAGCCAAATAAGAAGTTCTTCGAGCTTGTTGGCAGAACATTTGACTGGCACTGATTTGCAATAAGCTAAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS TCA 72 bp CTGCCAACAAGCTCGAAGAACTTCTTATTTGGCTCATaGAAATATTCGTGCAGTTTATTGAGTAGTTTGGGA +
Preference number: 6 (lower is better)
Translates to: LPTSSKNFLFGS*KYSCSLLSSLG
Trigger: TCCCAAACTACTCAATAAACTGCACGAATATTTTCATGAGCCAAATAAGAAGTTCTTCGAGCTTGTTGGCAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6
CDS CAA 72 bp AGAACTTACAGTAGGAAAGTTTCTGAGCTTAGCTTATaGCAAATCAGTGCCAGTCAAATGTTCTGCCAACAA +
Preference number: 6 (lower is better)
Translates to: RTYSRKVSELSL*QISASQMFCQQ
Trigger: TTGTTGGCAGAACATTTGACTGGCACTGATTTGCAATAAGCTAAGCTCAGAAACTTTCCTACTGTAAGTTCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000002596.6