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Pregenerated sensors for HS1BP3-IT1 (Homo sapiens)

Ensembl gene IDs: ENSG00000231948

Ensembl transcript IDs: ENST00000449391.2

Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
CDS GCA 90 bp GTGCTTGTGTTCTTGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTaGATCACCGTAGTGACTCCCCGACAGCTCTGTCCCTGCCCGGCT +
Preference number: 5 (lower is better)
Translates to: VLVFLGAASPFLHGS*ITVVTPRQLCPCPA
Trigger: AGCCGGGCAGGGACAGAGCTGTCGGGGAGTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 90 bp GAATCAGAGCCTGCCCCAGCCACTGGAGAGGGACGCCTCCATCTGTaGTTGTGTTCTTGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCT +
Preference number: 5 (lower is better)
Translates to: ESEPAPATGEGRLHL*LCSWVLPAPSSTGA
Trigger: AGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGCAGGCTCTGATTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 90 bp CCACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTGCTaGCAGCCCCTTCCTCCACGGGAGCTGCATCACCGTAGTGACTCC +
Preference number: 5 (lower is better)
Translates to: PLERDASICACVLGC*QPLPPRELHHRSDS
Trigger: GGAGTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 90 bp CAGCCACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTaGTGCCAGCCCCTTCCTCCACGGGAGCTGCATCACCGTAGTGAC +
Preference number: 5 (lower is better)
Translates to: QPLERDASICACVLG*CQPLPPRELHHRSD
Trigger: GTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 90 bp AAACTGCATCTCCCTACCTCCCTGCCCAATATTTGTCCATCAGGCTaGCCAGGTCCCCATGCTGTGGCAGGAGCGCCGATGATGAGTGCT +
Preference number: 5 (lower is better)
Translates to: KLHLPTSLPNICPSG*PGPHAVAGAPMMSA
Trigger: AGCACTCATCATCGGCGCTCCTGCCACAGCATGGGGACCTGGGCAGCCTGATGGACAAATATTGGGCAGGGAGGTAGGGAGATGCAGTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS TCA 90 bp CCTGGAAAGGGCAATTTATTGTCTCCACTTGGCATTAGAGGAAACTaGTGCTCAAAGAGATGGACCTCCTGGACCAAGGACAAAGAGCAC +
Preference number: 5 (lower is better)
Translates to: PGKGNLLSPLGIRGN*CSKRWTSWTKDKEH
Trigger: GTGCTCTTTGTCCTTGGTCCAGGAGGTCCATCTCTTTGAGCATCAGTTTCCTCTAATGCCAAGTGGAGACAATAAATTGCCCTTTCCAGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 90 bp CAAGGACAAAGAGCACAATCTGGACTCTACACAGACTTGTTTAGGTaGAAAGATTCCTATTCAATAAAGGGAAGGGAATCCAGGAAACTG +
Preference number: 5 (lower is better)
Translates to: QGQRAQSGLYTDLFR*KDSYSIKGRESRKL
Trigger: CAGTTTCCTGGATTCCCTTCCCTTTATTGAATAGGAATCTTTGCACCTAAACAAGTCTGTGTAGAGTCCAGATTGTGCTCTTTGTCCTTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CAA 72 bp GCCCCAGCCACTGGAGAGGGACGCCTCCATCTGTGCTaGTGTTCTTGGGTGCTGCCAGCCCCTTCCTCCACG +
Preference number: 6 (lower is better)
Translates to: APATGEGRLHLC*CSWVLPAPSST
Trigger: CGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 72 bp TTCTTGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTaGATCACCGTAGTGACTCCCCGACAGCTCTGTCCC +
Preference number: 6 (lower is better)
Translates to: FLGAASPFLHGS*ITVVTPRQLCP
Trigger: GGGACAGAGCTGTCGGGGAGTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CAA 72 bp CACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTaGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTGC +
Preference number: 6 (lower is better)
Translates to: HWRGTPPSVLVF*GAASPFLHGSC
Trigger: GCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CAA 90 bp TGCCCCAGCCACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTaGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTGCATCACCGTA +
Preference number: 6 (lower is better)
Translates to: CPSHWRGTPPSVLVF*GAASPFLHGSCITV
Trigger: TACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 72 bp AGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTGCTaGCAGCCCCTTCCTCCACGGGAGCTGCATCACCGT +
Preference number: 6 (lower is better)
Translates to: RDASICACVLGC*QPLPPRELHHR
Trigger: ACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 72 bp GAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTaGTGCCAGCCCCTTCCTCCACGGGAGCTGCATCAC +
Preference number: 6 (lower is better)
Translates to: ERDASICACVLG*CQPLPPRELHH
Trigger: GTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS GCA 72 bp ACAGCTGCTCCAAATGCAGGAGGCGGAATCAGAGCCTaGCCCAGCCACTGGAGAGGGACGCCTCCATCTGTG +
Preference number: 6 (lower is better)
Translates to: TAAPNAGGGIRA*PSHWRGTPPSV
Trigger: CACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGCAGGCTCTGATTCCGCCTCCTGCATTTGGAGCAGCTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CCA 72 bp ACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTaGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTGCA +
Preference number: 6 (lower is better)
Translates to: TGEGRLHLCLCS*VLPAPSSTGAA
Trigger: TGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CAA 90 bp AAGGGAATCCAGGAAACTGCATCTCCCTACCTCCCTGCCCAATATTaGTCCATCAGGCTGCCCAGGTCCCCATGCTGTGGCAGGAGCGCC +
Preference number: 6 (lower is better)
Translates to: KGIQETASPYLPAQY*SIRLPRSPCCGRSA
Trigger: GGCGCTCCTGCCACAGCATGGGGACCTGGGCAGCCTGATGGACAAATATTGGGCAGGGAGGTAGGGAGATGCAGTTTCCTGGATTCCCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS TCA 72 bp GGCAATTTATTGTCTCCACTTGGCATTAGAGGAAACTaGTGCTCAAAGAGATGGACCTCCTGGACCAAGGAC +
Preference number: 6 (lower is better)
Translates to: GNLLSPLGIRGN*CSKRWTSWTKD
Trigger: GTCCTTGGTCCAGGAGGTCCATCTCTTTGAGCATCAGTTTCCTCTAATGCCAAGTGGAGACAATAAATTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CAA 90 bp CTCCTGGACCAAGGACAAAGAGCACAATCTGGACTCTACACAGACTaGTTTAGGTGCAAAGATTCCTATTCAATAAAGGGAAGGGAATCC +
Preference number: 6 (lower is better)
Translates to: LLDQGQRAQSGLYTD*FRCKDSYSIKGRES
Trigger: GGATTCCCTTCCCTTTATTGAATAGGAATCTTTGCACCTAAACAAGTCTGTGTAGAGTCCAGATTGTGCTCTTTGTCCTTGGTCCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449391.2
CDS CAA 72 bp CAAGGACAAAGAGCACAATCTGGACTCTACACAGACTaGTTTAGGTGCAAAGATTCCTATTCAATAAAGGGA +
Preference number: 6 (lower is better)
Translates to: QGQRAQSGLYTD*FRCKDSYSIKG
Trigger: TCCCTTTATTGAATAGGAATCTTTGCACCTAAACAAGTCTGTGTAGAGTCCAGATTGTGCTCTTTGTCCTTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000449391.2