Pregenerated sensors for HS1BP3-IT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000231948Ensembl transcript IDs: ENST00000449391.2
Found 19 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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CDS GCA 90 bp | GTGCTTGTGTTCTTGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTaGATCACCGTAGTGACTCCCCGACAGCTCTGTCCCTGCCCGGCT | + |
Preference number: 5 (lower is better) Translates to: VLVFLGAASPFLHGS*ITVVTPRQLCPCPA Trigger: AGCCGGGCAGGGACAGAGCTGTCGGGGAGTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 90 bp | GAATCAGAGCCTGCCCCAGCCACTGGAGAGGGACGCCTCCATCTGTaGTTGTGTTCTTGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCT | + |
Preference number: 5 (lower is better) Translates to: ESEPAPATGEGRLHL*LCSWVLPAPSSTGA Trigger: AGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGCAGGCTCTGATTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 90 bp | CCACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTGCTaGCAGCCCCTTCCTCCACGGGAGCTGCATCACCGTAGTGACTCC | + |
Preference number: 5 (lower is better) Translates to: PLERDASICACVLGC*QPLPPRELHHRSDS Trigger: GGAGTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 90 bp | CAGCCACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTaGTGCCAGCCCCTTCCTCCACGGGAGCTGCATCACCGTAGTGAC | + |
Preference number: 5 (lower is better) Translates to: QPLERDASICACVLG*CQPLPPRELHHRSD Trigger: GTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 90 bp | AAACTGCATCTCCCTACCTCCCTGCCCAATATTTGTCCATCAGGCTaGCCAGGTCCCCATGCTGTGGCAGGAGCGCCGATGATGAGTGCT | + |
Preference number: 5 (lower is better) Translates to: KLHLPTSLPNICPSG*PGPHAVAGAPMMSA Trigger: AGCACTCATCATCGGCGCTCCTGCCACAGCATGGGGACCTGGGCAGCCTGATGGACAAATATTGGGCAGGGAGGTAGGGAGATGCAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS TCA 90 bp | CCTGGAAAGGGCAATTTATTGTCTCCACTTGGCATTAGAGGAAACTaGTGCTCAAAGAGATGGACCTCCTGGACCAAGGACAAAGAGCAC | + |
Preference number: 5 (lower is better) Translates to: PGKGNLLSPLGIRGN*CSKRWTSWTKDKEH Trigger: GTGCTCTTTGTCCTTGGTCCAGGAGGTCCATCTCTTTGAGCATCAGTTTCCTCTAATGCCAAGTGGAGACAATAAATTGCCCTTTCCAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 90 bp | CAAGGACAAAGAGCACAATCTGGACTCTACACAGACTTGTTTAGGTaGAAAGATTCCTATTCAATAAAGGGAAGGGAATCCAGGAAACTG | + |
Preference number: 5 (lower is better) Translates to: QGQRAQSGLYTDLFR*KDSYSIKGRESRKL Trigger: CAGTTTCCTGGATTCCCTTCCCTTTATTGAATAGGAATCTTTGCACCTAAACAAGTCTGTGTAGAGTCCAGATTGTGCTCTTTGTCCTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CAA 72 bp | GCCCCAGCCACTGGAGAGGGACGCCTCCATCTGTGCTaGTGTTCTTGGGTGCTGCCAGCCCCTTCCTCCACG | + |
Preference number: 6 (lower is better) Translates to: APATGEGRLHLC*CSWVLPAPSST Trigger: CGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 72 bp | TTCTTGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTaGATCACCGTAGTGACTCCCCGACAGCTCTGTCCC | + |
Preference number: 6 (lower is better) Translates to: FLGAASPFLHGS*ITVVTPRQLCP Trigger: GGGACAGAGCTGTCGGGGAGTCACTACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CAA 72 bp | CACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTaGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTGC | + |
Preference number: 6 (lower is better) Translates to: HWRGTPPSVLVF*GAASPFLHGSC Trigger: GCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CAA 90 bp | TGCCCCAGCCACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTaGGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTGCATCACCGTA | + |
Preference number: 6 (lower is better) Translates to: CPSHWRGTPPSVLVF*GAASPFLHGSCITV Trigger: TACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 72 bp | AGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTGCTaGCAGCCCCTTCCTCCACGGGAGCTGCATCACCGT | + |
Preference number: 6 (lower is better) Translates to: RDASICACVLGC*QPLPPRELHHR Trigger: ACGGTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 72 bp | GAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTGGGTaGTGCCAGCCCCTTCCTCCACGGGAGCTGCATCAC | + |
Preference number: 6 (lower is better) Translates to: ERDASICACVLG*CQPLPPRELHH Trigger: GTGATGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS GCA 72 bp | ACAGCTGCTCCAAATGCAGGAGGCGGAATCAGAGCCTaGCCCAGCCACTGGAGAGGGACGCCTCCATCTGTG | + |
Preference number: 6 (lower is better) Translates to: TAAPNAGGGIRA*PSHWRGTPPSV Trigger: CACAGATGGAGGCGTCCCTCTCCAGTGGCTGGGGCAGGCTCTGATTCCGCCTCCTGCATTTGGAGCAGCTGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CCA 72 bp | ACTGGAGAGGGACGCCTCCATCTGTGCTTGTGTTCTTaGGTGCTGCCAGCCCCTTCCTCCACGGGAGCTGCA | + |
Preference number: 6 (lower is better) Translates to: TGEGRLHLCLCS*VLPAPSSTGAA Trigger: TGCAGCTCCCGTGGAGGAAGGGGCTGGCAGCACCCAAGAACACAAGCACAGATGGAGGCGTCCCTCTCCAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CAA 90 bp | AAGGGAATCCAGGAAACTGCATCTCCCTACCTCCCTGCCCAATATTaGTCCATCAGGCTGCCCAGGTCCCCATGCTGTGGCAGGAGCGCC | + |
Preference number: 6 (lower is better) Translates to: KGIQETASPYLPAQY*SIRLPRSPCCGRSA Trigger: GGCGCTCCTGCCACAGCATGGGGACCTGGGCAGCCTGATGGACAAATATTGGGCAGGGAGGTAGGGAGATGCAGTTTCCTGGATTCCCTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS TCA 72 bp | GGCAATTTATTGTCTCCACTTGGCATTAGAGGAAACTaGTGCTCAAAGAGATGGACCTCCTGGACCAAGGAC | + |
Preference number: 6 (lower is better) Translates to: GNLLSPLGIRGN*CSKRWTSWTKD Trigger: GTCCTTGGTCCAGGAGGTCCATCTCTTTGAGCATCAGTTTCCTCTAATGCCAAGTGGAGACAATAAATTGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CAA 90 bp | CTCCTGGACCAAGGACAAAGAGCACAATCTGGACTCTACACAGACTaGTTTAGGTGCAAAGATTCCTATTCAATAAAGGGAAGGGAATCC | + |
Preference number: 6 (lower is better) Translates to: LLDQGQRAQSGLYTD*FRCKDSYSIKGRES Trigger: GGATTCCCTTCCCTTTATTGAATAGGAATCTTTGCACCTAAACAAGTCTGTGTAGAGTCCAGATTGTGCTCTTTGTCCTTGGTCCAGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449391.2 |
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CDS CAA 72 bp | CAAGGACAAAGAGCACAATCTGGACTCTACACAGACTaGTTTAGGTGCAAAGATTCCTATTCAATAAAGGGA | + |
Preference number: 6 (lower is better) Translates to: QGQRAQSGLYTD*FRCKDSYSIKG Trigger: TCCCTTTATTGAATAGGAATCTTTGCACCTAAACAAGTCTGTGTAGAGTCCAGATTGTGCTCTTTGTCCTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000449391.2 |