RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HS1BP3 (Homo sapiens)

Ensembl gene IDs: ENSG00000118960

Ensembl transcript IDs: ENST00000304031.8, ENST00000402541.5, ENST00000406618.3, ENST00000415264.5, ENST00000445102.1, ENST00000446825.1, ENST00000458740.5, ENST00000651498.1

Found 1130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TGGGCTCCGGCTTTGTGCTGGCGACTCCCACCCTCCCAGCAGCCCTaGCGTGGAGCAGCCCTTCAGCAGAGCAGCAGCGCCTCGCCGCGG +
Preference number: 1 (lower is better)
Translates to: WAPALCWRLPPSQQP*RGAALQQSSSASPR
Trigger: CCGCGGCGAGGCGCTGCTGCTCTGCTGAAGGGCTGCTCCACGGCAGGGCTGCTGGGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCA
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp AGCAGCGCCTCGCCGCGGCCACGGCGGGGAAGGACCGAGGCTGGTTaGATGGAAATGGTGGCCGCTCCAGGAGAGCCCAGAGCTAAGCCC +
Preference number: 1 (lower is better)
Translates to: SSASPRPRRGRTEAG*MEMVAAPGEPRAKP
Trigger: GGGCTTAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCGGCGAGGCGCTGCT
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GCGCCTCGCCGCGGCCACGGCGGGGAAGGACCGAGGCTGGTTGCATaGAAATGGTGGCCGCTCCAGGAGAGCCCAGAGCTAAGCCCAGAC +
Preference number: 1 (lower is better)
Translates to: APRRGHGGEGPRLVA*KWWPLQESPELSPD
Trigger: GTCTGGGCTTAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCGGCGAGGCGC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp CGCCGCGGCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATaGTGGCCGCTCCAGGAGAGCCCAGAGCTAAGCCCAGACATGGGG +
Preference number: 1 (lower is better)
Translates to: RRGHGGEGPRLVAWK*WPLQESPELSPDMG
Trigger: CCCCATGTCTGGGCTTAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCGGCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp CGGAGGGCCAGGAGGAGCGACTGCAGGGCACTTGCTGTGCCCAGGTaGCGCAGGACCCCAGATCTCAGGCCTGTTTCTGCTGCAGCTCCC +
Preference number: 1 (lower is better)
Translates to: RRARRSDCRALAVPR*RRTPDLRPVSAAAP
Trigger: GGGAGCTGCAGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCACCTGGGCACAGCAAGTGCCCTGCAGTCGCTCCTCCTGGCCCTCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp GCCAGCCACGGAGGGCCAGGAGGAGCGACTGCAGGGCACTTGCTGTaGCCAGGTGCCGCAGGACCCCAGATCTCAGGCCTGTTTCTGCTG +
Preference number: 1 (lower is better)
Translates to: ASHGGPGGATAGHLL*PGAAGPQISGLFLL
Trigger: CAGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCACCTGGGCACAGCAAGTGCCCTGCAGTCGCTCCTCCTGGCCCTCCGTGGCTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp CGCGGCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTaGCCGCTCCAGGAGAGCCCAGAGCTAAGCCCAGACATGGGGCAG +
Preference number: 1 (lower is better)
Translates to: RGHGGEGPRLVAWKW*PLQESPELSPDMGQ
Trigger: CTGCCCCATGTCTGGGCTTAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GCACGCAGAGAGCTACTTCCCCCAACACACCAGGCCAAGGCCTCGTaGCCCAGATCCCTGCGAGGGGGCGACCTGGGATGCTCAGGGCTT +
Preference number: 1 (lower is better)
Translates to: ARRELLPPTHQAKAS*PRSLRGGDLGCSGL
Trigger: AAGCCCTGAGCATCCCAGGTCGCCCCCTCGCAGGGATCTGGGCCACGAGGCCTTGGCCTGGTGTGTTGGGGGAAGTAGCTCTCTGCGTGC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 90 bp CCAAGTCCAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTaGGAGAATCATGCCCCACTGGCAGTGGGAGGCGGTGCAGGCTGG +
Preference number: 1 (lower is better)
Translates to: PSPDPEDDEGLGAEA*ENHAPLAVGGGAGW
Trigger: CCAGCCTGCACCGCCTCCCACTGCCAGTGGGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 90 bp CCCAGTCCTCCCACACTAGCCGGACAGGCCCGCAGCCTGCACTACTaGGCTGTCACGGAGGACTCTACCAAGCCCCAGTGCGGAGCCACA +
Preference number: 1 (lower is better)
Translates to: PSPPTLAGQARSLHY*AVTEDSTKPQCGAT
Trigger: TGTGGCTCCGCACTGGGGCTTGGTAGAGTCCTCCGTGACAGCTCAGTAGTGCAGGCTGCGGGCCTGTCCGGCTAGTGTGGGAGGACTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 90 bp GAGGGGAAGCTGCTCAGGACAGGGCGCCACAGCTGGAGAGGGACGTaGTCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGCCAGG +
Preference number: 1 (lower is better)
Translates to: EGKLLRTGRHSWRGT*SDAGQSRQVLARAR
Trigger: CCTGGCCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGCTGTGGCGCCCTGTCCTGAGCAGCTTCCCCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp CTAAGCCCAGACATGGGGCAGGGCAAGCTGGGAAACGGGTGCCGCTaGATCTGCACAGGAACCAAGCGCACGGGAGGGAGAGGGGTGCAC +
Preference number: 1 (lower is better)
Translates to: LSPDMGQGKLGNGCR*ICTGTKRTGGRGVH
Trigger: GTGCACCCCTCTCCCTCCCGTGCGCTTGGTTCCTGTGCAGATGCAGCGGCACCCGTTTCCCAGCTTGCCCTGCCCCATGTCTGGGCTTAG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp CCAGAGCTAAGCCCAGACATGGGGCAGGGCAAGCTGGGAAACGGGTaGCGCTGCATCTGCACAGGAACCAAGCGCACGGGAGGGAGAGGG +
Preference number: 1 (lower is better)
Translates to: PELSPDMGQGKLGNG*RCICTGTKRTGGRG
Trigger: CCCTCTCCCTCCCGTGCGCTTGGTTCCTGTGCAGATGCAGCGGCACCCGTTTCCCAGCTTGCCCTGCCCCATGTCTGGGCTTAGCTCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp CCCACACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTaGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCAGG +
Preference number: 1 (lower is better)
Translates to: PTPSLPFMSTGNKTH*ALAPRVRAAPAARR
Trigger: CCTGCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTGTGGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR CCA 90 bp AGCGCCGCGTACCCTTTCCCAGTGCAAATCCTCACCCCTGGACGCTaGTCTCATGGCCACCCTGCAGCCCACCCTCCCATAACCCTCCCC +
Preference number: 1 (lower is better)
Translates to: SAAYPFPVQILTPGR*SHGHPAAHPPITLP
Trigger: GGGGAGGGTTATGGGAGGGTGGGCTGCAGGGTGGCCATGAGACCAGCGTCCAGGGGTGAGGATTTGCACTGGGAAAGGGTACGCGGCGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp CAGAGGGTCCTTCTTTGCCTCTTCCAGTTCCTGGCGTTCCCCCGCTaGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTTCACGTGGCC +
Preference number: 1 (lower is better)
Translates to: QRVLLCLFQFLAFPR*WQHHAHPCLSLHVA
Trigger: GGCCACGTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR GCA 90 bp CCAGACATGGGGCAGGGCAAGCTGGGAAACGGGTGCCGCTGCATCTaGACAGGAACCAAGCGCACGGGAGGGAGAGGGGTGCACAAACAG +
Preference number: 1 (lower is better)
Translates to: PDMGQGKLGNGCRCI*TGTKRTGGRGVHKQ
Trigger: CTGTTTGTGCACCCCTCTCCCTCCCGTGCGCTTGGTTCCTGTGCAGATGCAGCGGCACCCGTTTCCCAGCTTGCCCTGCCCCATGTCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp CCACGGATGACACGTCCTCCGAGGGGTCCTGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAA +
Preference number: 1 (lower is better)
Translates to: PRMTRPPRGPVETAS*PGQRAPHQGPPPRQ
Trigger: TTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAGGACGTGTCATCCGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp CTCCCTGAGCGCCGCGTACCCTTTCCCAGTGCAAATCCTCACCCCTaGACGCTGGTCTCATGGCCACCCTGCAGCCCACCCTCCCATAAC +
Preference number: 1 (lower is better)
Translates to: LPERRVPFPSANPHP*TLVSWPPCSPPSHN
Trigger: GTTATGGGAGGGTGGGCTGCAGGGTGGCCATGAGACCAGCGTCCAGGGGTGAGGATTTGCACTGGGAAAGGGTACGCGGCGCTCAGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp AAAAGACAAAGAAAAGCCAGGCCGGCCTGGGCTCCGGCTTTGTGCTaGCGACTCCCACCCTCCCAGCAGCCCTGCCGTGGAGCAGCCCTT +
Preference number: 1 (lower is better)
Translates to: KRQRKARPAWAPALC*RLPPSQQPCRGAAL
Trigger: AAGGGCTGCTCCACGGCAGGGCTGCTGGGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCAGGCCGGCCTGGCTTTTCTTTGTCTTTT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GGGAGCCCCAGGACTCAGCTGCCTATGGCTCTGAACAGACAGTGCTaGTCCAGCCAGGGAAGGCCTTCTCCAGAGGGGCACTGCTGGAGG +
Preference number: 1 (lower is better)
Translates to: GSPRTQLPMALNRQC*SSQGRPSPEGHCWR
Trigger: CCTCCAGCAGTGCCCCTCTGGAGAAGGCCTTCCCTGGCTGGACCAGCACTGTCTGTTCAGAGCCATAGGCAGCTGAGTCCTGGGGCTCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp CGGCTCCTTCTCCCTGGGAAGGCAGCTCCACTGGTGAAAGGCCACTaGCCAAGTCCAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAA +
Preference number: 1 (lower is better)
Translates to: RLLLPGKAAPLVKGH*PSPDPEDDEGLGAE
Trigger: TTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGGTCAGTGGCCTTTCACCAGTGGAGCTGCCTTCCCAGGGAGAAGGAGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 90 bp TGCCGCAGGACCCCAGATCTCAGGCCTGTTTCTGCTGCAGCTCCCTaGGCGCCGCGTACCCTTTCCCAGTGCAAATCCTCACCCCTGGAC +
Preference number: 1 (lower is better)
Translates to: CRRTPDLRPVSAAAP*APRTLSQCKSSPLD
Trigger: GTCCAGGGGTGAGGATTTGCACTGGGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 90 bp CTTCAGCATCCCTGGGTCCCAGGGCTGAAGCTGCATCTAAGAACCTaGGCCCTGAAGGCCAGGGCGGGTTTGCTGACAGAGGCGCAGGGC +
Preference number: 1 (lower is better)
Translates to: LQHPWVPGLKLHLRT*ALKARAGLLTEAQG
Trigger: GCCCTGCGCCTCTGTCAGCAAACCCGCCCTGGCCTTCAGGGCTCAGGTTCTTAGATGCAGCTTCAGCCCTGGGACCCAGGGATGCTGAAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp CCCAGTGCAAATCCTCACCCCTGGACGCTGGTCTCATGGCCACCCTaGAGCCCACCCTCCCATAACCCTCCCCACGAAGAAGGCCTTTCC +
Preference number: 1 (lower is better)
Translates to: PSANPHPWTLVSWPP*SPPSHNPPHEEGLS
Trigger: GGAAAGGCCTTCTTCGTGGGGAGGGTTATGGGAGGGTGGGCTGCAGGGTGGCCATGAGACCAGCGTCCAGGGGTGAGGATTTGCACTGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp TGTGCCCAGGTGCCGCAGGACCCCAGATCTCAGGCCTGTTTCTGCTaGAGCTCCCTGAGCGCCGCGTACCCTTTCCCAGTGCAAATCCTC +
Preference number: 1 (lower is better)
Translates to: CAQVPQDPRSQACFC*SSLSAAYPFPVQIL
Trigger: GAGGATTTGCACTGGGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCACCTGGGCACA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp TGCTGTGCCCAGGTGCCGCAGGACCCCAGATCTCAGGCCTGTTTCTaGTGCAGCTCCCTGAGCGCCGCGTACCCTTTCCCAGTGCAAATC +
Preference number: 1 (lower is better)
Translates to: CCAQVPQDPRSQACF*CSSLSAAYPFPVQI
Trigger: GATTTGCACTGGGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCACCTGGGCACAGCA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp TTTAAAAGACAAAGAAAAGCCAGGCCGGCCTGGGCTCCGGCTTTGTaGTGGCGACTCCCACCCTCCCAGCAGCCCTGCCGTGGAGCAGCC +
Preference number: 1 (lower is better)
Translates to: FKRQRKARPAWAPAL*WRLPPSQQPCRGAA
Trigger: GGCTGCTCCACGGCAGGGCTGCTGGGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCAGGCCGGCCTGGCTTTTCTTTGTCTTTTAAA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp CAGTTCCTGGCGTTCCCCCGCTGGTGGCAGCACCACGCCCATCCCTaGCTCAGCCTTCACGTGGCCTTCTCTTCTCCACTGTGTGTCTCT +
Preference number: 1 (lower is better)
Translates to: QFLAFPRWWQHHAHP*LSLHVAFSSPLCVS
Trigger: AGAGACACACAGTGGAGAAGAGAAGGCCACGTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAGGAACTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR CCA 90 bp CCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTaGGGTCCTGGCTCTGCCATCTGCAGGCTGCAGGAACGTGGACGA +
Preference number: 1 (lower is better)
Translates to: PCPPPRLIKTGLEMA*GPGSAICRLQERGR
Trigger: TCGTCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GGCCAGGGGCCAGCATGGAAGGGTCAGAAGAGGCTGGGGGCGGCCTaGGCTGGTGTATCGTGGTCCTGGATGTACTGCAAGATGTCCATC +
Preference number: 1 (lower is better)
Translates to: GQGPAWKGQKRLGAA*AGVSWSWMYCKMSI
Trigger: GATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCTCTTCTGACCCTTCCATGCTGGCCCCTGGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp AGGCTGGGGGCGGCCTGGGCTGGTGTATCGTGGTCCTGGATGTACTaGAAGATGTCCATCTCGTCCATGGCTTGGATCTGCTCCTGCGGC +
Preference number: 1 (lower is better)
Translates to: RLGAAWAGVSWSWMY*KMSISSMAWICSCG
Trigger: GCCGCAGGAGCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp AGCTGTCACGGAGGACTCTACCAAGCCCCAGTGCGGAGCCACAAGTaGAGGACATCCTGTGACCCGAGAAGGGAGGCGACACCTAAGCCC +
Preference number: 1 (lower is better)
Translates to: SCHGGLYQAPVRSHK*RTSCDPRREATPKP
Trigger: GGGCTTAGGTGTCGCCTCCCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTAGAGTCCTCCGTGACAGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 90 bp TCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTaGGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACA +
Preference number: 1 (lower is better)
Translates to: SCPRGIRHIGLWLLG*EPLPQPAGFYFGPT
Trigger: TGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 90 bp GGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGATGGTaGGCCGGGGCGAGGGCTTGGCTTTCACGGCCACTTTGGGATGTT +
Preference number: 1 (lower is better)
Translates to: GQRAPHQGPPPRQRW*AGARAWLSRPLWDV
Trigger: AACATCCCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GTGACCCGAGAAGGGAGGCGACACCTAAGCCCAGTCCCAGAGACATaGACACCACCAAGGGCACGCAGAGAGCTACTTCCCCCAACACAC +
Preference number: 1 (lower is better)
Translates to: VTREGRRHLSPVPET*TPPRARRELLPPTH
Trigger: GTGTGTTGGGGGAAGTAGCTCTCTGCGTGCCCTTGGTGGTGTGCATGTCTCTGGGACTGGGCTTAGGTGTCGCCTCCCTTCTCGGGTCAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp GTATGGCTGGTGAATGGCCCTGTGTGGAGGCAGGGCCAAGGTGAATaGTCCTGCTATGCAGATGATGCAGCCCAGAGAGCCGCAGCCACC +
Preference number: 1 (lower is better)
Translates to: VWLVNGPVWRQGQGE*SCYADDAAQRAAAT
Trigger: GGTGGCTGCGGCTCTCTGGGCTGCATCATCTGCATAGCAGGAGCATTCACCTTGGCCCTGCCTCCACACAGGGCCATTCACCAGCCATAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp CAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCTGGCTCTaGCATCTGCAGGCTGCAGGAACGTGGACGAACCACCTGACCCTG +
Preference number: 1 (lower is better)
Translates to: QADKDWTGDGVGSWL*HLQAAGTWTNHLTL
Trigger: CAGGGTCAGGTGGTTCGTCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp GCCGCTGCATCTGCACAGGAACCAAGCGCACGGGAGGGAGAGGGGTaGACAAACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAG +
Preference number: 1 (lower is better)
Translates to: AAASAQEPSAREGEG*TNSLPRRTESPPPK
Trigger: CTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTTTGTGCACCCCTCTCCCTCCCGTGCGCTTGGTTCCTGTGCAGATGCAGCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp TCCTGGATGTACTGCAAGATGTCCATCTCGTCCATGGCTTGGATCTaGTCCTGCGGCTTCTGCTGCCCAGCCACAGCTTCAGCCGGGCCC +
Preference number: 1 (lower is better)
Translates to: SWMYCKMSISSMAWI*SCGFCCPATASAGP
Trigger: GGGCCCGGCTGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp TTGTGCCCACAGAACCTGGCTGCTGCTTCACAGGATGCTGTGGGCTaGATGAGAACTCAAGGGCCAGTCCCTACTGCTCCTCCACCGGCC +
Preference number: 1 (lower is better)
Translates to: LCPQNLAAASQDAVG*MRTQGPVPTAPPPA
Trigger: GGCCGGTGGAGGAGCAGTAGGGACTGGCCCTTGAGTTCTCATGCAGCCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GGGGCTGGGGACTTGACTGAGCTGTTGACAGGCCTGTTGATCACTTaGCCAGTGGCCTGCCACCTCCTGTTAGGAGCTAGCTGGTACCGG +
Preference number: 1 (lower is better)
Translates to: GAGDLTELLTGLLIT*PVACHLLLGASWYR
Trigger: CCGGTACCAGCTAGCTCCTAACAGGAGGTGGCAGGCCACTGGGCAAGTGATCAACAGGCCTGTCAACAGCTCAGTCAAGTCCCCAGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp GAAGGCAGCTCCACTGGTGAAAGGCCACTGACCAAGTCCAGACCCTaGGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGC +
Preference number: 1 (lower is better)
Translates to: EGSSTGERPLTKSRP*GRRRPRGRSLRESC
Trigger: GCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGGTCAGTGGCCTTTCACCAGTGGAGCTGCCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 90 bp GGGGGCTCCCTCAGGGCTGGCTTTGGTGTCTATCAGAAAAGGGTCTaGGGTCCTAGTCCCACCCGCTCAATGCTTCTGCCAGGCAGGACA +
Preference number: 1 (lower is better)
Translates to: GGSLRAGFGVYQKRV*GPSPTRSMLLPGRT
Trigger: TGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGACTAGGACCTCAGACCCTTTTCTGATAGACACCAAAGCCAGCCCTGAGGGAGCCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTaGTTCACAGGATGCTGTGGGCTGCATGAGAACTCAAGGGCCAGT +
Preference number: 1 (lower is better)
Translates to: AGLEPWPFVPTEPGC*FTGCCGLHENSRAS
Trigger: ACTGGCCCTTGAGTTCTCATGCAGCCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp CAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTaGTGCTTCACAGGATGCTGTGGGCTGCATGAGAACTCAAGGGCC +
Preference number: 1 (lower is better)
Translates to: QAGLEPWPFVPTEPG*CFTGCCGLHENSRA
Trigger: GGCCCTTGAGTTCTCATGCAGCCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp AGGGGATATCACACAGCCAAGCTGGACTGGAACCCTGGCCGTTTGTaGCCACAGAACCTGGCTGCTGCTTCACAGGATGCTGTGGGCTGC +
Preference number: 1 (lower is better)
Translates to: RGYHTAKLDWNPGRL*PQNLAAASQDAVGC
Trigger: GCAGCCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGATATCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GATGGCGTGGGGTCCTGGCTCTGCCATCTGCAGGCTGCAGGAACGTaGACGAACCACCTGACCCTGAACTTGAGTTTCCCACCACACAGA +
Preference number: 1 (lower is better)
Translates to: DGVGSWLCHLQAAGT*TNHLTLNLSFPPHR
Trigger: TCTGTGTGGTGGGAAACTCAAGTTCAGGGTCAGGTGGTTCGTCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGGACCCCACGCCATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp TTGTGCACACAAAGTTCTCTCTTTCTGGAACTAGCTGAGCAGCCCTaGGCTGCGGATCCTCCCCCTCAGCCCCCTTCACCGCCTCTCACC +
Preference number: 1 (lower is better)
Translates to: LCTQSSLFLELAEQP*AADPPPQPPSPPLT
Trigger: GGTGAGAGGCGGTGAAGGGGGCTGAGGGGGAGGATCCGCAGCCCAGGGCTGCTCAGCTAGTTCCAGAAAGAGAGAACTTTGTGTGCACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 90 bp ACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTTCCTaGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCACAGTCCT +
Preference number: 1 (lower is better)
Translates to: TASRACMPWCHISRS*KEAAWLPLNPRHSP
Trigger: AGGACTGTGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 90 bp GGTCAGAAGAGGCTGGGGGCGGCCTGGGCTGGTGTATCGTGGTCCTaGATGTACTGCAAGATGTCCATCTCGTCCATGGCTTGGATCTGC +
Preference number: 1 (lower is better)
Translates to: GQKRLGAAWAGVSWS*MYCKMSISSMAWIC
Trigger: GCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCTCTTCTGACC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp TGGAAGGGTCAGAAGAGGCTGGGGGCGGCCTGGGCTGGTGTATCGTaGTCCTGGATGTACTGCAAGATGTCCATCTCGTCCATGGCTTGG +
Preference number: 1 (lower is better)
Translates to: WKGQKRLGAAWAGVS*SWMYCKMSISSMAW
Trigger: CCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCTCTTCTGACCCTTCCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp CTGTGGGGTGAGGGGATATCACACAGCCAAGCTGGACTGGAACCCTaGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTCACAGGATGC +
Preference number: 1 (lower is better)
Translates to: LWGEGISHSQAGLEP*PFVPTEPGCCFTGC
Trigger: GCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGATATCCCCTCACCCCACAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp ATGCCAGGGGCCTTGGGGACATGTAAATACCAGAAGCCGTCACGGTaGCTCAGGCTTGGCGGGCACTTGCAGGGCTGTCTAATAGCCCGA +
Preference number: 1 (lower is better)
Translates to: MPGALGTCKYQKPSR*LRLGGHLQGCLIAR
Trigger: TCGGGCTATTAGACAGCCCTGCAAGTGCCCGCCAAGCCTGAGTCACCGTGACGGCTTCTGGTATTTACATGTCCCCAAGGCCCCTGGCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 90 bp CCTGGCATAGAAGTCAGTGGTCAGCACTGGGGCTGGGGACTTGACTaGGCTGTTGACAGGCCTGTTGATCACTTGCCCAGTGGCCTGCCA +
Preference number: 1 (lower is better)
Translates to: PGIEVSGQHWGWGLD*AVDRPVDHLPSGLP
Trigger: TGGCAGGCCACTGGGCAAGTGATCAACAGGCCTGTCAACAGCTCAGTCAAGTCCCCAGCCCCAGTGCTGACCACTGACTTCTATGCCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp TTGACTGAGCTGTTGACAGGCCTGTTGATCACTTGCCCAGTGGCCTaGCACCTCCTGTTAGGAGCTAGCTGGTACCGGGCAGGGAAGTCC +
Preference number: 1 (lower is better)
Translates to: LTELLTGLLITCPVA*HLLLGASWYRAGKS
Trigger: GGACTTCCCTGCCCGGTACCAGCTAGCTCCTAACAGGAGGTGGCAGGCCACTGGGCAAGTGATCAACAGGCCTGTCAACAGCTCAGTCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTaGCACGGGCCAGGAGCTGAGACACTCAACACTGATGGCTGCAAA +
Preference number: 1 (lower is better)
Translates to: AGEGRDQMQDRADRS*HGPGAETLNTDGCK
Trigger: TTTGCAGCCATCAGTGTTGAGTGTCTCAGCTCCTGGCCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp ATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCACAGTaGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCA +
Preference number: 1 (lower is better)
Translates to: MVSRESRPLRRWRPQ*MNTQRAGQVLPVTP
Trigger: TGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp ACTTGGCACTGTGGGGTGAGGGGATATCACACAGCCAAGCTGGACTaGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTCA +
Preference number: 1 (lower is better)
Translates to: TWHCGVRGYHTAKLD*NPGRLCPQNLAAAS
Trigger: TGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGATATCCCCTCACCCCACAGTGCCAAGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp TTCCTCCCAGGACCCAGGGTGGGTAAGTCTCTTCACTTGGCACTGTaGGGTGAGGGGATATCACACAGCCAAGCTGGACTGGAACCCTGG +
Preference number: 1 (lower is better)
Translates to: FLPGPRVGKSLHLAL*GEGISHSQAGLEPW
Trigger: CCAGGGTTCCAGTCCAGCTTGGCTGTGTGATATCCCCTCACCCCACAGTGCCAAGTGAAGAGACTTACCCACCCTGGGTCCTGGGAGGAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp AGTGAGAGGCCAGCCACAGAGGAGGGTGGATATCTGTGTACCGCGTaGGATTCTGTGTGTCGCAGCGCCAGGCCTGGCATAGAAGTCAGT +
Preference number: 1 (lower is better)
Translates to: SERPATEEGGYLCTA*DSVCRSARPGIEVS
Trigger: ACTGACTTCTATGCCAGGCCTGGCGCTGCGACACACAGAATCCCACGCGGTACACAGATATCCACCCTCCTCTGTGGCTGGCCTCTCACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp TCTGTTTCCCTTCCACAGGGAACTCTCAGCTGCAGGCTCCTGGCCTaGGCAGACCTTCTCAGAATGGCCAAAGTGCCTGTCCTCAGGAGC +
Preference number: 1 (lower is better)
Translates to: SVSLPQGTLSCRLLA*ADLLRMAKVPVLRS
Trigger: GCTCCTGAGGACAGGCACTTTGGCCATTCTGAGAAGGTCTGCTCAGGCCAGGAGCCTGCAGCTGAGAGTTCCCTGTGGAAGGGAAACAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp ACCGGCCCCTCAGTCAGCTTCCCCAACTGCAAGGCCTTAGGGTGCTaGGCAGGGAATGGTTTGGAGCGATCAGAGTTTGTAGTGAGTGGG +
Preference number: 1 (lower is better)
Translates to: TGPSVSFPNCKALGC*AGNGLERSEFVVSG
Trigger: CCCACTCACTACAAACTCTGATCGCTCCAAACCATTCCCTGCTCAGCACCCTAAGGCCTTGCAGTTGGGGAAGCTGACTGAGGGGCCGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp CAGGGATGGCACAGGGGGCATGCCTTGCAGAATGGAATGGGCCTCTaGTTGCTGCTGAATGCCACGTGCTCAGGACAGGTGGTAACTGTA +
Preference number: 1 (lower is better)
Translates to: QGWHRGHALQNGMGL*LLLNATCSGQVVTV
Trigger: TACAGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCATCCCTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp AACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTaGGTGGCACCAAGAGAGATCAACAAGCCCACCTGGGTGTCTGTG +
Preference number: 1 (lower is better)
Translates to: NSLPRRTESPPPKGR*VAPREINKPTWVSV
Trigger: CACAGACACCCAGGTGGGCTTGTTGATCTCTCTTGGTGCCACCCACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTaGCGTCCACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTG +
Preference number: 1 (lower is better)
Translates to: GVFVMVSRESRPLRR*RPQWMNTQRAGQVL
Trigger: CAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GTTCCCGGCTTCCTAAGAGGAACAATGCCGGGAGGAAGGGAGCAGTaGGACCCCAGCCATAGACAGTACATCCTGTCCATGGGCTCACAA +
Preference number: 1 (lower is better)
Translates to: VPGFLRGTMPGGREQ*DPSHRQYILSMGSQ
Trigger: TTGTGAGCCCATGGACAGGATGTACTGTCTATGGCTGGGGTCCCACTGCTCCCTTCCTCCCGGCATTGTTCCTCTTAGGAAGCCGGGAAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp CACACAGAGTACACAGGGATGGCACAGGGGGCATGCCTTGCAGAATaGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACA +
Preference number: 1 (lower is better)
Translates to: HTEYTGMAQGACLAE*NGPLLAAECHVLRT
Trigger: TGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCATCCCTGTGTACTCTGTGTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp ACAGAAGAGGCTGATGCCAGTGCAGGCCTCCAGGGCTCCGTTTCTTaGCCTGTGCCCACAGTGGATCCTGAAAGCAGTTTGGCGAGTCAT +
Preference number: 1 (lower is better)
Translates to: TEEADASAGLQGSVS*PVPTVDPESSLASH
Trigger: ATGACTCGCCAAACTGCTTTCAGGATCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTGGAGGCCTGCACTGGCATCAGCCTCTTCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp GGGGCATGCCTTGCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATaGCACGTGCTCAGGACAGGTGGTAACTGTACTGGGTCGAATTGC +
Preference number: 1 (lower is better)
Translates to: GACLAEWNGPLLAAE*HVLRTGGNCTGSNC
Trigger: GCAATTCGACCCAGTACAGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GCACTGCTGAAACACACAGAGTACACAGGGATGGCACAGGGGGCATaGCTTGCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCAC +
Preference number: 1 (lower is better)
Translates to: ALLKHTEYTGMAQGA*LAEWNGPLLAAECH
Trigger: GTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCATCCCTGTGTACTCTGTGTGTTTCAGCAGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GTGTATCGTGGTCCTGGATGTACTGCAAGATGTCCATCTCGTCCATaGCTTGGATCTGCTCCTGCGGCTTCTGCTGCCCAGCCACAGCTT +
Preference number: 1 (lower is better)
Translates to: VYRGPGCTARCPSRP*LGSAPAASAAQPQL
Trigger: AAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp AAGGGGTCCTCTTTCTTTCTACATGGGTCTTGGCTGTGCAGTTACTaGCCCGATGACCACACTGGGCCTGGGACTCTATGCCTCCTCTGC +
Preference number: 1 (lower is better)
Translates to: KGSSFFLHGSWLCSY*PDDHTGPGTLCLLC
Trigger: GCAGAGGAGGCATAGAGTCCCAGGCCCAGTGTGGTCATCGGGCCAGTAACTGCACAGCCAAGACCCATGTAGAAAGAAAGAGGACCCCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp CGGGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTaGCCGCTGGACAATAAGGCCACAGGGCCCCAGAGAGTGGCTGGA +
Preference number: 1 (lower is better)
Translates to: RVLNHCTKYVNTTPR*PLDNKATGPQRVAG
Trigger: TCCAGCCACTCTCTGGGGCCCTGTGGCCTTATTGTCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp AAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTGATAAGGAGTaGCTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGC +
Preference number: 1 (lower is better)
Translates to: KAQERPAALGQADKE*LLQACPHITHYSGC
Trigger: GCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACTCCTTATCAGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 90 bp GAGTGGCTGGACTTTGCTGTCTCGTCTGTACCTTGTGTGAGAGCTTaGGACTCAGAGGAGCCCGTGGGGCACATGGAGGTGAACTTAGTC +
Preference number: 1 (lower is better)
Translates to: EWLDFAVSSVPCVRA*DSEEPVGHMEVNLV
Trigger: GACTAAGTTCACCTCCATGTGCCCCACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGGTACAGACGAGACAGCAAAGTCCAGCCACTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp AACTGCCTGCCCAGCTTCCTCCTGACACGTCCCCTCACATGGGAGTaGAACCGACATGGCACTGCTGAAACACACAGAGTACACAGGGAT +
Preference number: 1 (lower is better)
Translates to: NCLPSFLLTRPLTWE*NRHGTAETHRVHRD
Trigger: ATCCCTGTGTACTCTGTGTGTTTCAGCAGTGCCATGTCGGTTTCACTCCCATGTGAGGGGACGTGTCAGGAGGAAGCTGGGCAGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GTGTCTATCAGAAAAGGGTCTGAGGTCCTAGTCCCACCCGCTCAATaGTTCTGCCAGGCAGGACAGGGCCAAGGAGCAATAGTGGTTGCA +
Preference number: 1 (lower is better)
Translates to: VSIRKGSEVLVPPAQ*FCQAGQGQGAIVVA
Trigger: TGCAACCACTATTGCTCCTTGGCCCTGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGACTAGGACCTCAGACCCTTTTCTGATAGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GGAGACAGAAAGGGGTCCTCTTTCTTTCTACATGGGTCTTGGCTGTaGAGTTACTGGCCCGATGACCACACTGGGCCTGGGACTCTATGC +
Preference number: 1 (lower is better)
Translates to: GDRKGSSFFLHGSWL*SYWPDDHTGPGTLC
Trigger: GCATAGAGTCCCAGGCCCAGTGTGGTCATCGGGCCAGTAACTGCACAGCCAAGACCCATGTAGAAAGAAAGAGGACCCCTTTCTGTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp GCCTTGCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTaGTCAGGACAGGTGGTAACTGTACTGGGTCGAATTGCGTCCCTT +
Preference number: 1 (lower is better)
Translates to: ALQNGMGLCLLLNAT*SGQVVTVLGRIASL
Trigger: AAGGGACGCAATTCGACCCAGTACAGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp CCAGTGCAGGCCTCCAGGGCTCCGTTTCTTGACCTGTGCCCACAGTaGATCCTGAAAGCAGTTTGGCGAGTCATGACCTTTCCAAACGTT +
Preference number: 1 (lower is better)
Translates to: PVQASRAPFLDLCPQ*ILKAVWRVMTFPNV
Trigger: AACGTTTGGAAAGGTCATGACTCGCCAAACTGCTTTCAGGATCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTGGAGGCCTGCACTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GTGGAAACCCAACTTCAAGGTACGGCTCTGCCACACACACAGCTCTaGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCT +
Preference number: 1 (lower is better)
Translates to: VETQLQGTALPHTQL*NTHGSGQDPAQLLP
Trigger: AGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTGTGTGTGTGGCAGAGCCGTACCTTGAAGTTGGGTTTCCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp AGGTCTGGAGACAGAAAGGGGTCCTCTTTCTTTCTACATGGGTCTTaGCTGTGCAGTTACTGGCCCGATGACCACACTGGGCCTGGGACT +
Preference number: 1 (lower is better)
Translates to: RSGDRKGSSFFLHGS*LCSYWPDDHTGPGT
Trigger: AGTCCCAGGCCCAGTGTGGTCATCGGGCCAGTAACTGCACAGCCAAGACCCATGTAGAAAGAAAGAGGACCCCTTTCTGTCTCCAGACCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp ATCAGAAAAGGGTCTGAGGTCCTAGTCCCACCCGCTCAATGCTTCTaGCAGGCAGGACAGGGCCAAGGAGCAATAGTGGTTGCATTTCCT +
Preference number: 1 (lower is better)
Translates to: IRKGSEVLVPPAQCF*QAGQGQGAIVVAFP
Trigger: AGGAAATGCAACCACTATTGCTCCTTGGCCCTGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGACTAGGACCTCAGACCCTTTTCTGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp AAGAGAGATCAACAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTaGAAACCCAACTTCAAGGTACGGCTCTGCCACACACACAGCTCT +
Preference number: 1 (lower is better)
Translates to: KRDQQAHLGVCERPR*KPNFKVRLCHTHSS
Trigger: AGAGCTGTGTGTGTGGCAGAGCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTGTTGATCTCTCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GGGGCACATGGAGGTGAACTTAGTCCCAGATACATTGTATGGACGTaGTCATGGGACACCAGTACTCAACAGGTAGGTGCTCTCCAGGGG +
Preference number: 1 (lower is better)
Translates to: GAHGGELSPRYIVWT*SWDTSTQQVGALQG
Trigger: CCCCTGGAGAGCACCTACCTGTTGAGTACTGGTGTCCCATGACCACGTCCATACAATGTATCTGGGACTAAGTTCACCTCCATGTGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GCCCGTGGGGCACATGGAGGTGAACTTAGTCCCAGATACATTGTATaGACGTGGTCATGGGACACCAGTACTCAACAGGTAGGTGCTCTC +
Preference number: 1 (lower is better)
Translates to: ARGAHGGELSPRYIV*TWSWDTSTQQVGAL
Trigger: GAGAGCACCTACCTGTTGAGTACTGGTGTCCCATGACCACGTCCATACAATGTATCTGGGACTAAGTTCACCTCCATGTGCCCCACGGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GTAGAGGACTTTATAGTCTACCTGGCTTCCTCCCAGGACCCAGGGTaGGTAAGTCTCTTCACTTGGCACTGTGGGGTGAGGGGATATCAC +
Preference number: 1 (lower is better)
Translates to: VEDFIVYLASSQDPG*VSLFTWHCGVRGYH
Trigger: GTGATATCCCCTCACCCCACAGTGCCAAGTGAAGAGACTTACCCACCCTGGGTCCTGGGAGGAAGCCAGGTAGACTATAAAGTCCTCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp TTTATGGTGCTTTGCCAAGGCAGCTCCAGGAAATGGAACAAAAGCTaGGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGC +
Preference number: 1 (lower is better)
Translates to: FMVLCQGSSRKWNKS*AQAAGNKLSMLAGG
Trigger: GCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGCTTTTGTTCCATTTCCTGGAGCTGCCTTGGCAAAGCACCATAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GAAGGGAGCAGTGGGACCCCAGCCATAGACAGTACATCCTGTCCATaGGCTCACAACAGGCTTCGAAATAAACAAGTGTTGTTGTCCCCA +
Preference number: 1 (lower is better)
Translates to: EGSSGTPAIDSTSCP*AHNRLRNKQVLLSP
Trigger: TGGGGACAACAACACTTGTTTATTTCGAAGCCTGTTGTGAGCCCATGGACAGGATGTACTGTCTATGGCTGGGGTCCCACTGCTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp GACATCTGCACTTTGCCCCCTCGCTGGGTGGGCTGCATGCTGCCATaGGTCCGTTTAATTTGTTCCCAAACTTGCTTATGCCAGTTATAC +
Preference number: 1 (lower is better)
Translates to: DICTLPPRWVGCMLP*VRLICSQTCLCQLY
Trigger: GTATAACTGGCATAAGCAAGTTTGGGAACAAATTAAACGGACTCATGGCAGCATGCAGCCCACCCAGCGAGGGGGCAAAGTGCAGATGTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 90 bp GTGCTGCACCATTTTCCATTCCACAGCCATGGATTTTATAGACTGTaGGGTCCCGATGCAAATCCTAGGGCCACCCATACAAGCAGACAG +
Preference number: 1 (lower is better)
Translates to: VLHHFPFHSHGFYRL*GPDANPRATHTSRQ
Trigger: CTGTCTGCTTGTATGGGTGGCCCTAGGATTTGCATCGGGACCTCACAGTCTATAAAATCCATGGCTGTGGAATGGAAAATGGTGCAGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp TGTCGTGAAGATTACATAAGAGAGCGTGTAAGGAGTCTGGCTTACTaGGTACACAGCAAGGACTCAGGAAATAGGAGCTGTCACCGGCAC +
Preference number: 1 (lower is better)
Translates to: CREDYIRERVRSLAY*VHSKDSGNRSCHRH
Trigger: GTGCCGGTGACAGCTCCTATTTCCTGAGTCCTTGCTGTGTACGCAGTAAGCCAGACTCCTTACACGCTCTCTTATGTAATCTTCACGACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 90 bp TCTGCCATCAGCCTAGGCACAGAAAAGAACATCACTAACACAGGCTaGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCAT +
Preference number: 1 (lower is better)
Translates to: SAISLGTEKNITNTG*NGSQAQALSGDKDH
Trigger: ATGATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTCTGTGCCTAGGCTGATGGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp AGCTCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTaGAGAGAGCTAGCCCAGCTTTATTTAAAAAGCCATTCAGAGGCG +
Preference number: 1 (lower is better)
Translates to: SSACGKTNDMIGQLA*RELAQLYLKSHSEA
Trigger: CGCCTCTGAATGGCTTTTTAAATAAAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGAGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp GGTTGGCACAGACCACCAAAGTCCATCTCGGTTTGGCACTACGTGTaGTTACTCAGAACAACAGAGAATGTGAGTTCAAACAAAGCCTCA +
Preference number: 1 (lower is better)
Translates to: GWHRPPKSISVWHYV*LLRTTENVSSNKAS
Trigger: TGAGGCTTTGTTTGAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp TCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTaGCACTACGTGTGGTTACTCAGAACAACAGAGAATGTGAGTTCA +
Preference number: 1 (lower is better)
Translates to: SSAKGWHRPPKSISV*HYVWLLRTTENVSS
Trigger: TGAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 90 bp TGTGAGATAATACATTCCTGTGGTTTAAAGCCACCCAGTTTATGGTaGTTTGCCAAGGCAGCTCCAGGAAATGGAACAAAAGCTGAGCCC +
Preference number: 1 (lower is better)
Translates to: CEIIHSCGLKPPSLW*FAKAAPGNGTKAEP
Trigger: GGGCTCAGCTTTTGTTCCATTTCCTGGAGCTGCCTTGGCAAAGCACCATAAACTGGGTGGCTTTAAACCACAGGAATGTATTATCTCACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 90 bp TTCTACATGCTGATGAAGTTGAACTTGCTTCTGCCTAATTTCTACTaGGCTCTAATTCCTTTCTGCGGCAGGACCTACACTCATCTGGCG +
Preference number: 1 (lower is better)
Translates to: FYMLMKLNLLLPNFY*ALIPFCGRTYTHLA
Trigger: CGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGGAATTAGAGCCCAGTAGAAATTAGGCAGAAGCAAGTTCAACTTCATCAGCATGTAGAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 90 bp GTGTTTATGGATGAGCTCTGCATGTGGGAAAACAAACGACATGATTaGCCAGTTGGCCTGGAGAGAGCTAGCCCAGCTTTATTTAAAAAG +
Preference number: 1 (lower is better)
Translates to: VFMDELCMWENKRHD*PVGLERASPALFKK
Trigger: CTTTTTAAATAAAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGAGCTCATCCATAAACAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 90 bp TCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTaGTCTCAAGAAGCTAATCCCAGTGTTACGGCTCTTTTTGAATTT +
Preference number: 1 (lower is better)
Translates to: SLDSHRADTKNECGS*SQEANPSVTALFEF
Trigger: AAATTCAAAAAGAGCCGTAACACTGGGATTAGCTTCTTGAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR GCA 90 bp CCTGCCAGCCAGGATAGCTCTGAGTGTCACCAGCTCTCCAGTTTGTaGCACATGTTATCTAAGGAGTCATTTCACTATTTAATAAAGAGA +
Preference number: 1 (lower is better)
Translates to: PASQDSSECHQLSSL*HMLSKESFHYLIKR
Trigger: TCTCTTTATTAAATAGTGAAATGACTCCTTAGATAACATGTGGCACAAACTGGAGAGCTGGTGACACTCAGAGCTATCCTGGCTGGCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 90 bp TCTCGGTTTGGCACTACGTGTGGTTACTCAGAACAACAGAGAATGTaGGTTCAAACAAAGCCTCACCCTTACCAAAATAAAGCCCAAGAA +
Preference number: 1 (lower is better)
Translates to: SRFGTTCGYSEQQRM*VQTKPHPYQNKAQE
Trigger: TTCTTGGGCTTTATTTTGGTAAGGGTGAGGCTTTGTTTGAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAACCGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 90 bp ATTCCAGAACGGCACACAAGACAATCTCATTTTGGCAGTAAGATGTaGATATTCAAAGGTGCATTCAGAAATTCACAGGGAAAGGACTTT +
Preference number: 1 (lower is better)
Translates to: IPERHTRQSHFGSKM*IFKGAFRNSQGKDF
Trigger: AAAGTCCTTTCCCTGTGAATTTCTGAATGCACCTTTGAATATTCACATCTTACTGCCAAAATGAGATTGTCTTGTGTGCCGTTCTGGAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGGCCCAGGCCCCAGGCTaGGCTGTGGGGAAAGCTATG +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWAQAPG*AVGKAM
Trigger: CATAGCTTTCCCCACAGCTCAGCCTGGGGCCTGGGC...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR GCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGCGTGGCCCAGATCCCTaGGAGGGGGCGACCTGGGAT +
Preference number: 2 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRRGPDP*EGATWD
Trigger: ATCCCAGGTCGCCCCCTCGCAGGGATCTGGGCCACG...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGGCCAGGAGGAGCGACTaGAGGGCACTTGCTGTGCCC +
Preference number: 2 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRARRSD*RALAVP
Trigger: GGGCACAGCAAGTGCCCTGCAGTCGCTCCTCCTGGC...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCACCACAGAGTGGGGTGCTCGGCCTGGCCCTaGTGCTCCGCAGGCAGACTC +
Preference number: 2 (lower is better)
Translates to: SRDSPSALRDAKGHHRVGCSAWP*CSAGRL
Trigger: GAGTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCA...CCCCACTCTGTGGTGCCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGCGCAGGCTTCTACTTTaGCCCCACAGCCCCGGAGAA +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWRRLLL*PHSPGE
Trigger: TTCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCG...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGGCCCTGGAGTAATTTaGCTTGGGGACGTCCCCACC +
Preference number: 2 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRGPGVI*LGDVPT
Trigger: GGTGGGGACGTCCCCAAGCCAAATTACTCCAGGGCC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAGAATCATGCCCCACTaGCAGTGGGAGGCGGTGCAG +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWRIMPH*QWEAVQ
Trigger: CTGCACCGCCTCCCACTGCCAGTGGGGCATGATTCT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR TCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGCTCTGGCTCCTAGGGTaGGAGCCGCTCCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLLWLLG*EPLPQP
Trigger: GGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAG...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR TCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCTCTGGCTCCTAGGGTaGGAGCCGCTCCCGCAGCCC +
Preference number: 2 (lower is better)
Translates to: STVWCLDLCTSALGVGRSLWLLG*EPLPQP
Trigger: GGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR TCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAGGCAGCTCCACTGGTaGAAGGCCACTGACCAAGTC +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWRQLHW*KATDQV
Trigger: GACTTGGTCAGTGGCCTTTCACCAGTGGAGCTGCCT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGGCCCAGCCCCAGTTTaGGTCTGTGCTGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: QTLRTTKASGQKPERIMPGPAPV*VCAGAG
Trigger: GCCAGCCCCAGCACAGACCCAAACTGGGGCTGGGCC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTGGCCCAGCCCCAGTTTaGGTCTGTGCTGGGGCTGGC +
Preference number: 2 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAGPAPV*VCAGAG
Trigger: GCCAGCCCCAGCACAGACCCAAACTGGGGCTGGGCC...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GACCAGGGCCTGCCCCACGGGGGTTCTGGGTTGACAGGACTAACCGAGGAGTGGGGGCCAGGACACCCATaGGAAGGGCTTGACGTCTCC +
Preference number: 2 (lower is better)
Translates to: DQGLPHGGSGLTGLTEEWGPGHP*EGLDVS
Trigger: GGAGACGTCAAGCCCTTCCCATGGGTGTCCTGGCCC...CCACTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTGGGGCAGGCCCTGGTC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR CCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGTGCGAGGGGGCGACCTaGGATGCTCAGGGCTTTTCT +
Preference number: 2 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRCEGAT*DAQGFS
Trigger: AGAAAAGCCCTGAGCATCCCAGGTCGCCCCCTCGCA...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTGGGTGGAGCCGGTGCTaGAGCTGTCCCAGAGCTGGC +
Preference number: 2 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAGWSRC*SCPRAG
Trigger: GCCAGCTCTGGGACAGCTCCAGCACCGGCTCCACCC...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTCCTCCACCGGCCCCTaGATCTGCTTCCCCACCGGC +
Preference number: 2 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAASSTGP*ICFPTG
Trigger: GCCGGTGGGGAAGCAGATCCAGGGGCCGGTGGAGGA...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTGCCCAGGCCCCAGGCTaGGCTGTGGGGAAAGCTATG +
Preference number: 2 (lower is better)
Translates to: REGTKPRGELEPPLGGRPAQAPG*AVGKAM
Trigger: CATAGCTTTCCCCACAGCTCAGCCTGGGGCCTGGGC...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCAGTCACCCAGGGGGATaGCCCCGCCGAGGTCAGGAT +
Preference number: 2 (lower is better)
Translates to: QTLRTTKASGQKPERIMPSHPGG*PRRGQD
Trigger: ATCCTGACCTCGGCGGGGCCATCCCCCTGGGTGACT...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGGGGGGCGGCCTGGGCTaGTGTATCGTGGTCCTGGAT +
Preference number: 2 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGGGGLG*CIVVLD
Trigger: ATCCAGGACCACGATACACCAGCCCAGGCCGCCCCC...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
64% GC, longest homopolymer 9 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCTTCCCTGCCCCATGTaGCACCTCGCTACGGCCCCA +
Preference number: 2 (lower is better)
Translates to: STVWCLDLCTSALGVGRSLPCPM*HLATAP
Trigger: TGGGGCCGTAGCGAGGTGTCACATGGGGCAGGGAAG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR TCA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCCGCAGCCTGCACTACTaGGCTGTCACGGAGGACTCT +
Preference number: 2 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSRSLHY*AVTEDS
Trigger: AGAGTCCTCCGTGACAGCTCAGTAGTGCAGGCTGCG...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp CACTGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGCTTTCTGGAACTAGCTaGGCAGCCCTGGGCTGCGGA +
Preference number: 2 (lower is better)
Translates to: HWDTWTPRHARPGPAAPQLSGTS*AALGCG
Trigger: TCCGCAGCCCAGGGCTGCTCAGCTAGTTCCAGAAAG...CTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCAGTG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCT +
Preference number: 2 (lower is better)
Translates to: QTLRTTKASGQKPERIMPVETAS*PGQRAP
Trigger: AGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCAC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGACAGCCCCGGAGAAAATaGAACCATGCAGTTCTGGGT +
Preference number: 2 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRQPRRK*NHAVLG
Trigger: ACCCAGAACTGCATGGTTCCATTTTCTCCGGGGCTG...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCGTGCGGAGCCACAAGTaGAGGACATCCTGTGACCCG +
Preference number: 2 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSVRSHK*RTSCDP
Trigger: CGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCAC...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp ACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCACGGGGACAGGGACCCAGGGCCTaGAGGGGGTCCCTGTGTGCA +
Preference number: 2 (lower is better)
Translates to: TWHSRETSSFTTEATARGQGPRA*RGSLCA
Trigger: TGCACACAGGGACCCCCTCCAGGCCCTGGGTCCCTG...TCCCCGTGCTGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCAGCCGGGGCGAGGGCTTaGCTTTCACGGCCACTTTGG +
Preference number: 2 (lower is better)
Translates to: RPHMSCFILGAGLLVGKAAGARA*LSRPLW
Trigger: CCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGC...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGTGGGCTGGTGTATCGTaGTCCTGGATGTACTGCAAG +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWWAGVS*SWMYCK
Trigger: CTTGCAGTACATCCAGGACCACGATACACCAGCCCA...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp AAGTTGAGGTGTCAGCAGGACCCTGCGCCCTCAGAGGGTCCTTCTTaGCCTCTTCCAGTTCCTGGCGTTCCCCCGCTGGTGGCAGCACCA +
Preference number: 2 (lower is better)
Translates to: KLRCQQDPAPSEGPS*PLPVPGVPPLVAAP
Trigger: TGGTGCTGCCACCAGCGGGGGAACGCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTGAGGGCGCAGGGTCCTGCTGACACCTCAACTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR CAA 90 bp GCAAACCACCCGCACCATCAGCCGGGGGCTCCCTCAGGGCTGGCTTaGGTGTCTATCAGAAAAGGGTCTGAGGTCCTAGTCCCACCCGCT +
Preference number: 2 (lower is better)
Translates to: ANHPHHQPGAPSGLA*VSIRKGSEVLVPPA
Trigger: AGCGGGTGGGACTAGGACCTCAGACCCTTTTCTGATAGACACCAAAGCCAGCCCTGAGGGAGCCCCCGGCTGATGGTGCGGGTGGTTTGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGCAGAACCCGTGGGCATaGAGCTTCCCTGCCCCATGT +
Preference number: 2 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGQNPWA*SFPAPC
Trigger: ACATGGGGCAGGGAAGCTTCATGCCCACGGGTTCTG...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp ACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCACGGGGATCTGCTGCAGCTCCCTaGGCGCCGCGTACCCTTTCC +
Preference number: 2 (lower is better)
Translates to: TWHSRETSSFTTEATARGSAAAP*APRTLS
Trigger: GGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGA...TCCCCGTGCTGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAGTCCTCTTCAACTCTaGACAGTTCCTTGGAGGCGT +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWSPLQL*TVPWRR
Trigger: ACGCCTCCAAGGAACTGTTCAGAGTTGAAGAGGACT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGTCTCCCTTTAGAGCTTaGATCAAGAGGAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: REKSKARALPWRTAPSPWSPFRA*IKRRLR
Trigger: CCTGAGCCTCCTCTTGATGCAAGCTCTAAAGGGAGA...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR GCA 90 bp GAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGCACTGGGGGCAGGGGTaGTGGATCAATTCCTCAGCC +
Preference number: 2 (lower is better)
Translates to: ESGTSSGENLPCPGGICEHWGQG*WINSSA
Trigger: GGCTGAGGAATTGATCCAGCACCCCTGCCCCCAGTG...CTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR GCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTTGCTCCTGCGGCTTCTaGTGCCCAGCCACAGCTTCA +
Preference number: 2 (lower is better)
Translates to: REGTKPRGELEPPLGGRPCSCGF*CPATAS
Trigger: TGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCA...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGTTGGGGCTGGGCTTCTaGTTGGCAAGGCATCCCCAC +
Preference number: 2 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGLGLGF*LARHPH
Trigger: GTGGGGATGCCTTGCCAACCAGAAGCCCAGCCCCAA...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGGGCCCAAGAAGGCCATaGACTGGGCTGGCCTTTCCT +
Preference number: 2 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGGPRRP*TGLAFP
Trigger: AGGAAAGGCCAGCCCAGTCCATGGCCTTCTTGGGCC...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCCAGAGTACAGAGCTaGGGAGGGGGCTGCCCCCGC +
Preference number: 2 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVPRVQS*GGGCPR
Trigger: GCGGGGGCAGCCCCCTCCCCAGCTCTGTACTCTGGG...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp CTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTGTGCCTCGGCTAGCTGAGCAGCCCTaGGCTGCGGATCCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: LALLLRRQTLVFHFPVPRLAEQP*AADPPP
Trigger: AGGGGGAGGATCCGCAGCCCAGGGCTGCTCAGCTAG...CCGAGGCACAGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp TGCCAGGGGCCTTGGGGACATGTAAATACCAGAAGCCGTCACGGTGACTCAGGCTGCCCCCTCGCTGGGTaGGCTGCATGCTGCCATGAG +
Preference number: 2 (lower is better)
Translates to: CQGPWGHVNTRSRHGDSGCPLAG*AACCHE
Trigger: CTCATGGCAGCATGCAGCCCACCCAGCGAGGGGGCA...GCCTGAGTCACCGTGACGGCTTCTGGTATTTACATGTCCCCAAGGCCCCTGGCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp CACTGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGTCCTGGAGCATGGAGTaGGAGCTGGAGACACGCACA +
Preference number: 2 (lower is better)
Translates to: HWDTWTPRHARPGPAAPQSWSME*ELETRT
Trigger: TGTGCGTGTCTCCAGCTCCCACTCCATGCTCCAGGA...CTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCAGTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTCCGAGGGGTCCTGTaGAGACAGCTTCCTGCCCGG +
Preference number: 2 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLLRGVL*RQLPAR
Trigger: CCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAG...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCGGCCAGGGGCCAGCATaGAAGGGTCAGAAGAGGCTG +
Preference number: 2 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASGQGPA*KGQKRL
Trigger: CAGCCTCTTCTGACCCTTCCATGCTGGCCCCTGGCC...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCTCGGGGCAGAAGCCTaGGAGAATCATGCCCCACTG +
Preference number: 2 (lower is better)
Translates to: STVWCLDLCTSALGVGRSLGAEA*ENHAPL
Trigger: CAGTGGGGCATGATTCTCTCAGGCTTCTGCCCCGAG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR TCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCAGCTGAGACTGGGCAATaGGCCGGGCCCTTGGCTCTG +
Preference number: 2 (lower is better)
Translates to: SHKPFLERGGLASSESQAAETGQ*AGPLAL
Trigger: CAGAGCCAAGGGCCCGGCTCATTGCCCAGTCTCAGC...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR TCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGAGCTGGAGAGGGACGTaGTCAGATGCAGGACAGAGC +
Preference number: 2 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGSWRGT*SDAGQS
Trigger: GCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGCT...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp GGTGGGAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTACTATGGAGAATGCCTaGTGTGTGAGCCCCCACCTG +
Preference number: 2 (lower is better)
Translates to: GGSPAPAVVRTCLVLGASTMENA*CVSPHL
Trigger: CAGGTGGGGGCTCACACAGCAGGCATTCTCCATAGT...AGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTAGCAGGGCACTTGCTGTaGCCAGGTGCCGCAGGACCC +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVAGHLL*PGAAGP
Trigger: GGGTCCTGCGGCACCTGGGCACAGCAAGTGCCCTGC...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCGCACGGGCCCTGCCCTaGCGCACGGCTCCTTCTCCC +
Preference number: 2 (lower is better)
Translates to: SVARKPPEARTKQSRILPARALP*RTAPSP
Trigger: GGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGC...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACCAGGTCAGGGGGTTGTATGTaGTGCATGGTCAGTCGGGGG +
Preference number: 2 (lower is better)
Translates to: GTSSGENLPCPGGICETRSGGCM*CMVSRG
Trigger: CCCCCGACTGACCATGCACCACATACAACCCCCTGA...CCTGGTCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR CCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACAGGCCAAGGCCTCGTaGCCCAGATCCCTGCGAGGG +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVQAKAS*PRSLRG
Trigger: CCCTCGCAGGGATCTGGGCCACGAGGCCTTGGCCTG...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGAAGTCTGAAGTTGAGGTGTCAGCAGGACCCTGCGCCCTCAGAGGGTCCTTCTGCCTCTTCCAGTTCCTaGCGTTCCCCCGCTGGTGGC +
Preference number: 2 (lower is better)
Translates to: RSLKLRCQQDPAPSEGPSASSSS*RSPAGG
Trigger: GCCACCAGCGGGGGAACGCCAGGAACTGGAAGAGGC...AGAAGGACCCTCTGAGGGCGCAGGGTCCTGCTGACACCTCAACTTCAGACTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR-3UTR CCA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTACTTTGCCCCCTCGCTaGGTGGGCTGCATGCTGCCA +
Preference number: 2 (lower is better)
Translates to: GVQMTASRACMPWCHISRTLPPR*VGCMLP
Trigger: TGGCAGCATGCAGCCCACCCAGCGAGGGGGCAAAGT...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCGCTGGGGCTTGGGTTTaGGCTCAGCTCCCAGGTTCA +
Preference number: 2 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASAGAWV*AQLPGS
Trigger: TGAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGC...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGGCTGGACTGGAACCCTaGCCGTTTGTGCCCACAGAA +
Preference number: 2 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGAGLEP*PFVPTE
Trigger: TTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGC...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp GTGAGGGGATATCACACAGCCAAGCTGGACTGGAACCCTGGCCGTTaGTGCCCACAGAACCTGGCTGCTGCTTCACAGGATGCTGTGGGC +
Preference number: 2 (lower is better)
Translates to: VRGYHTAKLDWNPGR*CPQNLAAASQDAVG
Trigger: GCCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGATATCCCCTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGACTGCAGGGCACTTaGTGTGCCCAGGTGCCGCAG +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVRLQGT*CAQVPQ
Trigger: CTGCGGCACCTGGGCACAGCAAGTGCCCTGCAGTCG...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGGTCTTGCTTCATCCTTaGGGCTGGGCTTCTGGTTGG +
Preference number: 2 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGVLLHP*GWASGW
Trigger: CCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGAC...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GACCAGGGCCTGCCCCACGGGGGTTCTGGGTTGACAGGACTAACCGAGGAGTGGCAGGAAGGCCATGGATaGGGTCACACTATGGAGAAT +
Preference number: 2 (lower is better)
Translates to: DQGLPHGGSGLTGLTEEWQEGHG*GHTMEN
Trigger: ATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTG...CCACTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTGGGGCAGGCCCTGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR CAA 90 bp ATCACCGGCTTAGCTGCCACTGGTGGCTTGGGCTTAAGCTGGGGCTaGGGTTTGGGCTCAGCTCCCAGGTTCAGAATCTGGTCCAAGTCC +
Preference number: 2 (lower is better)
Translates to: ITGLAATGGLGLSWG*GLGSAPRFRIWSKS
Trigger: GGACTTGGACCAGATTCTGAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGCTTAAGCCCAAGCCACCAGTGGCAGCTAAGCCGGTGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp ACAGGGCCCCAGAGAGTGGCTGGACTTTGCTGTCTCGTCTGTACCTaGTGTGAGAGCTTGAGACTCAGAGGAGCCCGTGGGGCACATGGA +
Preference number: 2 (lower is better)
Translates to: TGPQRVAGLCCLVCT*CESLRLRGARGAHG
Trigger: TCCATGTGCCCCACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGGTACAGACGAGACAGCAAAGTCCAGCCACTCTCTGGGGCCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCTTCCCTGCCCCATGTaGCACCTCGCTACGGCCCCA +
Preference number: 2 (lower is better)
Translates to: LTQAGMGHRHRLYQATRILPCPM*HLATAP
Trigger: TGGGGCCGTAGCGAGGTGTCACATGGGGCAGGGAAG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTCCTCCCCACTCCTACTaGGACCTTCCGCTGCAGTCA +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGPPHSY*DLPLQS
Trigger: TGACTGCAGCGGAAGGTCTCAGTAGGAGTGGGGAGG...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTGGCGTCCACAGTGGATaGATACACAACGGGCAGGCC +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGGVHSG*IHNGQA
Trigger: GGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCC...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGTGCTCTGGGCAGCTGTaGACCCACATGAAGCCAATA +
Preference number: 2 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGCSGQL*THMKPI
Trigger: TATTGGCTTCATGTGGGTTCACAGCTGCCCAGAGCA...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTAAGCCGCAGCCACCTCTaGGAGTCCCACAGCTGGAAG +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVSRSHL*ESHSWK
Trigger: CTTCCAGCTGTGGGACTCGCAGAGGTGGCTGCGGCT...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AGTGACTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGCCTCTCCCCAGGCCTGTTTCTGCTaGAGCTCCCTGAGCGCCGCG +
Preference number: 2 (lower is better)
Translates to: SDYYRLVPISPTTLAASPQACFC*SSLSAA
Trigger: CGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTG...GGGAGAGGCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGGGTGCCGCTGCATCTaGACAGGAACCAAGCGCACG +
Preference number: 2 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSGCRCI*TGTKRT
Trigger: CGTGCGCTTGGTTCCTGTGCAGATGCAGCGGCACCC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp GACCCACACTTTTTGAGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGAATGAGAACGTGAAGTaGCATGTGGTGCTGGCCCGC +
Preference number: 2 (lower is better)
Translates to: DPHFLSRDSPSALRDAKGNENVK*HVVLAR
Trigger: GCGGGCCAGCACCACATGGCACTTCACGTTCTCATT...CCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCTCAAAAAGTGTGGGTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTGTCCCACCCGCTCAATaGTTCTGCCAGGCAGGACAG +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGVPPAQ*FCQAGQ
Trigger: CTGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGAC...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTGCCACATTCTGTCCCTaGAGGAGGCCTCTCAGGCTC +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGATFCP*RRPLRL
Trigger: GAGCCTGAGAGGCCTCCTGCAGGGACAGAATGTGGC...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCCGCAGGCTTCTACTTTaGCCCCACAGCCCCGGAGAA +
Preference number: 2 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTRRLLL*PHSPGE
Trigger: TTCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCG...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAATGCCCCACTGGCAGTaGGAGGCGGTGCAGGCTGGG +
Preference number: 2 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGMPHWQ*EAVQAG
Trigger: CCCAGCCTGCACCGCCTCCCACTGCCAGTGGGGCAT...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp AGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGATGGCCAGGAAGGCCATaGATGGGGTCACACTATGGA +
Preference number: 2 (lower is better)
Translates to: SPAPAVVRTCLVLGASVRWPGRP*MGSHYG
Trigger: TCCATAGTGTGACCCCATCCATGGCCTTCCTGGCCA...TCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR CCA 90 bp GTGCACAAACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTGGGAGGACAGCACCCCTaGCCTGGTCTGATTCCACTG +
Preference number: 2 (lower is better)
Translates to: VHKQPPEKNRKSPTKGQVGGQHP*PGLIPL
Trigger: CAGTGGAATCAGACCAGGCCAGGGGTGCTGTCCTCC...CACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTTTGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCTCACCCCTGGACGCTaGTCTCATGGCCACCCTGCA +
Preference number: 2 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSLTPGR*SHGHPA
Trigger: TGCAGGGTGGCCATGAGACCAGCGTCCAGGGGTGAG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCTGTCCATCTCGTCCATaGCTTGGATCTGCTCCTGCG +
Preference number: 2 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASCPSRP*LGSAPA
Trigger: CGCAGGAGCAGATCCAAGCCATGGACGAGATGGACA...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp CCCTTCCAGGGAGTCTGGGAAGACCAGCTTTGCAGGCAGGTGCATTaGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCCT +
Preference number: 2 (lower is better)
Translates to: PFQGVWEDQLCRQVH*FIQEPACPKDAVSP
Trigger: AGGACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCCAGACTCCCTGGAAGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 90 bp GGATGGCACAGGGGGCATGCCTTGCAGAATGGAATGGGCCTCTGCTaGCTGCTGAATGCCACGTGCTCAGGACAGGTGGTAACTGTACTG +
Preference number: 2 (lower is better)
Translates to: GWHRGHALQNGMGLC*LLNATCSGQVVTVL
Trigger: CAGTACAGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCATCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCGTGGAGGACATCCTGTaGCCCGAGAAGGGAGGCGAC +
Preference number: 2 (lower is better)
Translates to: GTHTALAKILLNSFLDFTVEDIL*PEKGGD
Trigger: GTCGCCTCCCTTCTCGGGTCACAGGATGTCCTCCAC...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTGAGGCAGGGCCAAGGTaGATGCTCCTGCTATGCAGA +
Preference number: 2 (lower is better)
Translates to: PHPYQNKAQERPAALGQAEAGPR*MLLLCR
Trigger: TCTGCATAGCAGGAGCATTCACCTTGGCCCTGCCTC...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACCACACAGAAGAGGCTaGTGCCAGTGCAGGCCTCCA +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVPHRRG*CQCRPP
Trigger: TGGAGGCCTGCACTGGCATCAGCCTCTTCTGTGTGG...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCCCTCGTCAAAGATGGTaGGCCGGGGCGAGGGCTTGG +
Preference number: 2 (lower is better)
Translates to: SVARKPPEARTKQSRILPPRQRW*AGARAW
Trigger: CCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGG...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCAAAGCACTGTGTGGTaGCTAGACCTGTGTACCAGC +
Preference number: 2 (lower is better)
Translates to: STVWCLDLCTSALGVGRSQSTVW*LDLCTS
Trigger: GCTGGTACACAGGTCTAGGCACCACACAGTGCTTTG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCCTGGCTCTGCCATCTaGAGGCTGCAGGAACGTGGA +
Preference number: 2 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSPGSAI*RLQERG
Trigger: TCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AGGCAGATCACCCAGCCAAGTGCTCAGACAGTCCCTGATGAAGTGGAGAGGCCAAAGACATCTGCACTTTaGCCCCTCGCTGGGTGGGCT +
Preference number: 2 (lower is better)
Translates to: RQITQPSAQTVPDEVERPKTSAL*PLAGWA
Trigger: AGCCCACCCAGCGAGGGGGCAAAGTGCAGATGTCTT...TGGCCTCTCCACTTCATCAGGGACTGTCTGAGCACTTGGCTGGGTGATCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTGGGAATAAGACACATTaGGCTCTGGCTCCTAGGGTG +
Preference number: 2 (lower is better)
Translates to: STVWCLDLCTSALGVGRSGNKTH*ALAPRV
Trigger: CACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCC...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTTCAGTATTCCTCTCCTaGGAGACCCACCCAGACCCT +
Preference number: 2 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASVFLS*ETHPDP
Trigger: AGGGTCTGGGTGGGTCTCCCAGGAGAGGAATACTGA...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCGATGGCGTGGGGTCCTaGCTCTGCCATCTGCAGGCT +
Preference number: 2 (lower is better)
Translates to: GTHTALAKILLNSFLDFTDGVGS*LCHLQA
Trigger: AGCCTGCAGATGGCAGAGCCAGGACCCCACGCCATC...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTGGGGTCTTAGCCAGGTaGCGTCCCACACTTGATTTC +
Preference number: 2 (lower is better)
Translates to: GVQMTASRACMPWCHISRGVLAR*RPTLDF
Trigger: GAAATCAAGTGTGGGACGCCACCTGGCTAAGACCCC...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTTGGCATAGAAGTCAGTaGTCAGCACTGGGGCTGGGG +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGWHRSQ*SALGLG
Trigger: CCCCAGCCCCAGTGCTGACCACTGACTTCTATGCCA...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGACTAGAGGCTCAGCATaGCTCCTGGTAGAATTGGCT +
Preference number: 2 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGTRGSA*LLVELA
Trigger: AGCCAATTCTACCAGGAGCCATGCTGAGCCTCTAGT...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGACGGCCCCACATGTCTTaGTTCATCCTTGGGGCTGGG +
Preference number: 2 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGRPHMS*FILGAG
Trigger: CCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR GCA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTCGTACCCTTTCCCAGTaGAAATCCTCACCCCTGGAC +
Preference number: 2 (lower is better)
Translates to: PHPYQNKAQERPAALGQARTLSQ*KSSPLD
Trigger: GTCCAGGGGTGAGGATTTGCACTGGGAAAGGGTACG...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAAGGAAACGGGTGCCGCTaGATCTGCACAGGAACCAAG +
Preference number: 2 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKGNGCR*ICTGTK
Trigger: CTTGGTTCCTGTGCAGATGCAGCGGCACCCGTTTCC...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCAGGACCGAGGCTGGTTaGATGGAAATGGTGGCCGCT +
Preference number: 2 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVRTEAG*MEMVAA
Trigger: AGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCT...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAACGGTTGCATGGATGCTaGTGGGACGGGGTCAGAAGA +
Preference number: 2 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKRLHGC*WDGVRR
Trigger: TCTTCTGACCCCGTCCCAGCAGCATCCATGCAACCG...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp ATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTACAGCCTCCAGGGCCTaGATGCCTTGGTGTCACATA +
Preference number: 2 (lower is better)
Translates to: MLGLALLLRRQTLVFHFPTASRA*MPWCHI
Trigger: TATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGT...AGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCTGTATGGCTGGTGAATaGCCCTGTGTGGAGGCAGGG +
Preference number: 2 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVCMAGE*PCVEAG
Trigger: CCCTGCCTCCACACAGGGCCATTCACCAGCCATACA...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTAAAGGCCTGCCGCGTTaGGCCAGGCTGATAAGGAGT +
Preference number: 2 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSKGLPR*ARLIRS
Trigger: ACTCCTTATCAGCCTGGCCCAACGCGGCAGGCCTTT...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCTCCGGCTTTGTGCTaGCGACTCCCACCCTCCCAG +
Preference number: 2 (lower is better)
Translates to: NHKTWHSRETSSFTTEATAPALC*RLPPSQ
Trigger: CTGGGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGC...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCACCACAGAGTGGGGCTGCAGAACACAGGTTaGGAAGTAACGGATTTAGAA +
Preference number: 2 (lower is better)
Translates to: SRDSPSALRDAKGHHRVGLQNTG*EVTDLE
Trigger: TTCTAAATCCGTTACTTCCCAACCTGTGTTCTGCAG...CCCCACTCTGTGGTGCCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCAGTGCCATGTGGTGCTaGCCCGCGCACTACGAGCCC +
Preference number: 2 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALSAMWC*PAHYEP
Trigger: GGGCTCGTAGTGCGCGGGCCAGCACCACATGGCACT...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCGCCCAGGTGGCCGCTaGACAATAAGGCCACAGGGC +
Preference number: 2 (lower is better)
Translates to: PSVARKPPEARTKQSRILRPGGR*TIRPQG
Trigger: GCCCTGTGGCCTTATTGTCCAGCGGCCACCTGGGCG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp TCTGGGTTGACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACCCGGAGCTGTCCCCATaGCCCTCTCTGTGGGGGCAC +
Preference number: 2 (lower is better)
Translates to: SGLTGLTEEWGKIVATIYPELSP*PSLWGH
Trigger: GTGCCCCCACAGAGAGGGTCATGGGGACAGCTCCGG...GTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGTCAACCCAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR TCA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAAGGGTCCCAGGATAGCTaGCACATCTCCCCTGACAAT +
Preference number: 2 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKGSQDS*HISPDN
Trigger: ATTGTCAGGGGAGATGTGTCAGCTATCCTGGGACCC...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCCAGGGCTCCGTTTCTTaGCCTGTGCCCACAGTGGAT +
Preference number: 2 (lower is better)
Translates to: GTHTALAKILLNSFLDFTQGSVS*PVPTVD
Trigger: ATCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTG...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp GTACACAGCAAGGACTCAGGAAATAGGAGCTGTCACCGGCACAGGTTCTGCCAACCTCCATGTGACAGCTaGGGCCTCATTCTCCCTTCC +
Preference number: 2 (lower is better)
Translates to: VHSKDSGNRSCHRHRFCQPPCDS*GLILPS
Trigger: GGAAGGGAGAATGAGGCCTCAGCTGTCACATGGAGG...TTGGCAGAACCTGTGCCGGTGACAGCTCCTATTTCCTGAGTCCTTGCTGTGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR TCA 90 bp TGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGTGGCGTCCCACACTTaGTTTCTTATAATATGGAGA +
Preference number: 2 (lower is better)
Translates to: WDTWTPRHARPGPAAPQAVASHT*FLIIWR
Trigger: TCTCCATATTATAAGAAATCAAGTGTGGGACGCCAC...TGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCGGGGGCGACCTGGGATaGTCAGGGCTTTTCTCAGAT +
Preference number: 2 (lower is better)
Translates to: GTHTALAKILLNSFLDFTGGDLG*SGLFSD
Trigger: ATCTGAGAAAAGCCCTGAGCATCCCAGGTCGCCCCC...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp TGTGTTCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTGGCGTCTCATGGCCACCCTaGAGCCCACCCTCCCATAAC +
Preference number: 2 (lower is better)
Translates to: CVLQPKVGTDHQSPSRFGVSWPP*SPPSHN
Trigger: GTTATGGGAGGGTGGGCTGCAGGGTGGCCATGAGAC...GCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAACACGTGCATTGTGCCTaGGGTTGCATGGATGCTGCT +
Preference number: 2 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKHVHCA*GCMDAA
Trigger: AGCAGCATCCATGCAACCGCAGGCACAATGCACGTG...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp ATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTGCCTCTCACCCAATGTaGACCCACAGGCTTCTACTT +
Preference number: 2 (lower is better)
Translates to: MLGLALLLRRQTLVFHFPASHPM*THRLLL
Trigger: AAGTAGAAGCCTGTGGGTGCACATTGGGTGAGAGGC...AGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CCA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAAGGCCTCCCCTGGGGGTaGGGAGGTTCTGACCCTGCA +
Preference number: 2 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKGLPWG*GGSDPA
Trigger: TGCAGGGTCAGAACCTCCCCACCCCCAGGGGAGGCC...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGGCTGGGCTTCTGGTTaGCAAGGCATCCCCACACCC +
Preference number: 2 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCGWASG*QGIPTP
Trigger: GGGTGTGGGGATGCCTTGCCAACCAGAAGCCCAGCC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp TGTGTTCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTGGCTGCGAGTCCCACAGCTaGAAGGAGCACCCAGTCCTC +
Preference number: 2 (lower is better)
Translates to: CVLQPKVGTDHQSPSRFGCESHS*KEHPVL
Trigger: GAGGACTGGGTGCTCCTTCCAGCTGTGGGACTCGCA...GCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTTTGCATGGATGCTGCTaGGACGGGGTCAGAAGAGAG +
Preference number: 2 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSLHGCC*DGVRRE
Trigger: CTCTCTTCTGACCCCGTCCCAGCAGCATCCATGCAA...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCACTTTCACGGCCACTTTaGGATGTTTCTTGGGCTTCT +
Preference number: 2 (lower is better)
Translates to: RPHMSCFILGAGLLVGKALSRPL*DVSWAS
Trigger: AGAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAG...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTACTCTCACAGGCGGCTaGCAGCAGGAGGGAGTCACC +
Preference number: 2 (lower is better)
Translates to: PSVARKPPEARTKQSRILTLTGG*QQEGVT
Trigger: GGTGACTCCCTCCTGCTGCCAGCCGCCTGTGAGAGT...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTAGAGCAGACAGGTCCTaGCACGGGCCAGGAGCTGAG +
Preference number: 2 (lower is better)
Translates to: PSVARKPPEARTKQSRILRADRS*HGPGAE
Trigger: CTCAGCTCCTGGCCCGTGCCAGGACCTGTCTGCTCT...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCTCTCCCCTCCCTGGTaGTCTGCCATCAGCCTAGGC +
Preference number: 2 (lower is better)
Translates to: PSVARKPPEARTKQSRILLSPPW*SAISLG
Trigger: GCCTAGGCTGATGGCAGACCACCAGGGAGGGGAGAG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp AGAGTGGCTGGACTTTGCTGTCTCGTCTGTACCTTGTGTGAGAGCTaGAGACTCAGAGGAGCCCGTGGGGCACATGGAGGTGAACTTAGT +
Preference number: 2 (lower is better)
Translates to: RVAGLCCLVCTLCES*RLRGARGAHGGELS
Trigger: ACTAAGTTCACCTCCATGTGCCCCACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGGTACAGACGAGACAGCAAAGTCCAGCCACTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCGGGACCCACACTTTTTaGGCAGGGACTCCCCAAGCG +
Preference number: 2 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALGTHTF*AGTPQA
Trigger: CGCTTGGGGAGTCCCTGCTCAAAAAGTGTGGGTCCC...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTTCTCCCTTTAGAGCTTaGATCAAGAGGAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGSPFRA*IKRRLR
Trigger: CCTGAGCCTCCTCTTGATGCAAGCTCTAAAGGGAGA...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp CACTGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGTATTTCATTTCCCTGTaGCTCGGTTTCCCTCTAATA +
Preference number: 2 (lower is better)
Translates to: HWDTWTPRHARPGPAAPQYFISL*LGFPLI
Trigger: TATTAGAGGGAAACCGAGGCACAGGGAAATGAAATA...CTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCTATCACCGGCTTAGCTaGCACTGGTGGCTTGGGCTT +
Preference number: 2 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIYHRLS*HWWLGL
Trigger: AAGCCCAAGCCACCAGTGGCAGCTAAGCCGGTGATA...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCTCAGTATTCCTCTCCTaGGAGACCCACCCAGACCCT +
Preference number: 2 (lower is better)
Translates to: LTQAGMGHRHRLYQATRISVFLS*ETHPDP
Trigger: AGGGTCTGGGTGGGTCTCCCAGGAGAGGAATACTGA...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCATCTCCAGAAAGCCTaGAATACACCAAAGGGGCCC +
Preference number: 2 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSHLQKA*NTPKGP
Trigger: GGGCCCCTTTGGTGTATTCCAGGCTTTCTGGAGATG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp CCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGGCAAGTCCATCTCGGTTTaGCACTACGTGTGGTTACTC +
Preference number: 2 (lower is better)
Translates to: PTWVSVKGRGGNPTSRYGKSISV*HYVWLL
Trigger: GAGTAACCACACGTAGTGCCAAACCGAGATGGACTT...GCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCCAGGCTGATAAAGACTaGACTGGAGATGGCGTGGGG +
Preference number: 2 (lower is better)
Translates to: GTHTALAKILLNSFLDFTQADKD*TGDGVG
Trigger: CCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTG...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATAAAGCCAGGCCGGCCTaGGCTCCGGCTTTGTGCTGG +
Preference number: 2 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHKARPA*APALCW
Trigger: CCAGCACAAAGCCGGAGCCCAGGCCGGCCTGGCTTT...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTCAGACCTTCTCAGAATaGCCAAAGTGCCTGTCCTCA +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGQTFSE*PKCLSS
Trigger: TGAGGACAGGCACTTTGGCCATTCTGAGAAGGTCTG...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTAGTACATCCTGTCCATaGGCTCACAACAGGCTTCGA +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGSTSCP*AHNRLR
Trigger: TCGAAGCCTGTTGTGAGCCCATGGACAGGATGTACT...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp ACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACTGTGGTTGTCCCATGGGAAGGGCTTaGCGTCTCCACCACTGGGGG +
Preference number: 2 (lower is better)
Translates to: TGLTEEWGKIVATIYCGCPMGRA*RLHHWG
Trigger: CCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGG...ACAACCACAGTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR TCA 90 bp ACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCACGGGGACTGACACATCTCCCCTaGCAATCTGCTAATGAAGTA +
Preference number: 2 (lower is better)
Translates to: TWHSRETSSFTTEATARGLTHLP*QSANEV
Trigger: TACTTCATTAGCAGATTGTCAGGGGAGATGTGTCAG...TCCCCGTGCTGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCGTTTCTTGACCTGTaGCCACAGTGGATCCTGAAA +
Preference number: 2 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVPFLDL*PQWILK
Trigger: TTTCAGGATCCACTGTGGGCACAGGTCAAGAAACGG...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGATCAGAATGGCCAAAGTaGCTGTCCTCAGGAGCCAGG +
Preference number: 2 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGSEWPK*LSSGAR
Trigger: CCTGGCTCCTGAGGACAGGCACTTTGGCCATTCTGA...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTAAACCCTGGCCGTTTGTaGCCACAGAACCTGGCTGCT +
Preference number: 2 (lower is better)
Translates to: SACGKTNDMIGQLAWRELNPGRL*PQNLAA
Trigger: AGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTT...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTCAGTTTATGGTGCTTTaGCAAGGCAGCTCCAGGAAA +
Preference number: 2 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGQFMVL*QGSSRK
Trigger: TTTCCTGGAGCTGCCTTGGCAAAGCACCATAAACTG...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGTTGCATGGAAATGGTaGCCGCTCCAGGAGAGCCCA +
Preference number: 2 (lower is better)
Translates to: NHKTWHSRETSSFTTEATVAWKW*PLQESP
Trigger: TGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAAC...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 90 bp CTCCCTTTAGAGCTTGCATCAAGAGGAGGCTCAGGAGAGAGAGACTaGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCC +
Preference number: 2 (lower is better)
Translates to: LPLELASRGGSGERD*HQNTPDSRSPTQYS
Trigger: GGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTGAGCCTCCTCTTGATGCAAGCTCTAAAGGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR TCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACATACAGCCCATCGAGCTaGGAAACCAGCAGAGGAAGG +
Preference number: 2 (lower is better)
Translates to: NHKTWHSRETSSFTTEATYSPSS*ETSRGR
Trigger: CCTTCCTCTGCTGGTTTCTCAGCTCGATGGGCTGTA...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGAGAGTCCAGACCACTaGGGAGGTGGCGTCCACAGT +
Preference number: 2 (lower is better)
Translates to: EKNITNTGWNGSQAQALSESPDH*GGGVHS
Trigger: ACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTC...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTAGCTCTAATTCCTTTCTaGGGCAGGACCTACACTCAT +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVALIPF*GRTYTH
Trigger: ATGAGTGTAGGTCCTGCCGCAGAAAGGAATTAGAGC...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGAGGAGCAGAGGCCCTaGAGTAATTTGGCTTGGGGA +
Preference number: 2 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCEEQRP*SNLAWG
Trigger: TCCCCAAGCCAAATTACTCCAGGGCCTCTGCTCCTC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTAAGAAGGCCATGGACTaGGCTGGCCTTTCCTGGGAA +
Preference number: 2 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCKKAMD*AGLSWE
Trigger: TTCCCAGGAAAGGCCAGCCCAGTCCATGGCCTTCTT...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCTCTTCAGCCAAAGGTTaGCACAGACCACCAAAGTCC +
Preference number: 2 (lower is better)
Translates to: GTHTALAKILLNSFLDFTSSAKG*HRPPKS
Trigger: GGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGA...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTAATCACACAGCCAAGCTaGACTGGAACCCTGGCCGTT +
Preference number: 2 (lower is better)
Translates to: SACGKTNDMIGQLAWRELITQPS*TGTLAV
Trigger: AACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGAT...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGAGAACAACAGAGAATGTaGGTTCAAACAAAGCCTCAC +
Preference number: 2 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPREQQRM*VQTKPH
Trigger: GTGAGGCTTTGTTTGAACTCACATTCTCTGTTGTTC...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACATTCAAGGTACGGCTCTaGCACACACACAGCTCTGGA +
Preference number: 2 (lower is better)
Translates to: NHKTWHSRETSSFTTEATFKVRL*HTHSSG
Trigger: TCCAGAGCTGTGTGTGTGGCAGAGCCGTACCTTGAA...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGTACGAAAAGGCACGTaGATTGTGCCTGCGGTTGCA +
Preference number: 2 (lower is better)
Translates to: NHKTWHSRETSSFTTEATVRKGT*IVPAVA
Trigger: TGCAACCGCAGGCACAATGCACGTGCCTTTTCGTAC...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp CCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCGCACTACGAGCCCTaGTTTTTGTGGCATTTCCCC +
Preference number: 2 (lower is better)
Translates to: PTTPWIVTGQTQRMNVVPAHYEP*FLWHFP
Trigger: GGGGAAATGCCACAAAAAGCAGGGCTCGTAGTGCGC...AGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAACTCTATGCCTCCTCTaGCTTGGTTGGCATAGTGAG +
Preference number: 2 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGTLCLL*LGWHSE
Trigger: CTCACTATGCCAACCAAGGCAGAGGAGGCATAGAGT...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCACCCAGTTTATGGTaGTTTGCCAAGGCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: PSVARKPPEARTKQSRILPPSLW*FAKAAP
Trigger: TGGAGCTGCCTTGGCAAAGCACCATAAACTGGGTGG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGACTGCCTAATTTCTACTaGGCTCTAATTCCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPRLPNFY*ALIPFC
Trigger: GCAGAAAGGAATTAGAGCCCAGTAGAAATTAGGCAG...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATCCACACACACAGCTCTaGAACACACACGGCTCTGGC +
Preference number: 2 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHPHTQL*NTHGSG
Trigger: GCCAGAGCCGTGTGTGTTCCAGAGCTGTGTGTGTGG...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATCCACCAAAGGGCAGGTaGGTGGCACCAAGAGAGATC +
Preference number: 2 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHPPKGR*VAPREI
Trigger: GATCTCTCTTGGTGCCACCCACCTGCCCTTTGGTGG...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTACTTCACTTGGCACTGTaGGGTGAGGGGATATCACAC +
Preference number: 2 (lower is better)
Translates to: SACGKTNDMIGQLAWRELLHLAL*GEGISH
Trigger: GTGTGATATCCCCTCACCCCACAGTGCCAAGTGAAG...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp GGTTTGGAGCGATCAGAGTTTGTAGTGAGTGGGACCATTCATAGCTaGATGCTGAGACTTCAGCTCCTTGAGGAGGCTCTGAGCATTGAC +
Preference number: 2 (lower is better)
Translates to: GLERSEFVVSGTIHS*MLRLQLLEEALSID
Trigger: GTCAATGCTCAGAGCCTCCTCAAGGAGCTGAAGTCTCAGCATCAAGCTATGAATGGTCCCACTCACTACAAACTCTGATCGCTCCAAACC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAATGGAGAGGCAGGGCCTaGCTTCTCCCTTTAGAGCTT +
Preference number: 2 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKWRGRA*LLPLEL
Trigger: AAGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCA...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp ACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACTGTGGTTGTGCTTTCCCGGGATACTaGAGGTCCCTAGGGCTGGTT +
Preference number: 2 (lower is better)
Translates to: TGLTEEWGKIVATIYCGCAFPGY*RSLGLV
Trigger: AACCAGCCCTAGGGACCTGCAGTATCCCGGGAAAGC...ACAACCACAGTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR-3UTR GCA 90 bp CCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTATGAGAGTGAACAGATaGCAGGGGCCTTGGGGACAT +
Preference number: 2 (lower is better)
Translates to: PTTPWIVTGQTQRMNVVPMRVNR*QGPWGH
Trigger: ATGTCCCCAAGGCCCCTGGCATCTGTTCACTCTCAT...AGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR GCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAACTGAGACCTTCCGCTaGAGTCAGCAAGGGATGCAG +
Preference number: 2 (lower is better)
Translates to: EKNITNTGWNGSQAQALSTETFR*SQQGMQ
Trigger: CTGCATCCCTTGCTGACTGCAGCGGAAGGTCTCAGT...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAATGCAATGACGAACATTaGCTCTGTGCCCAGAGGCCC +
Preference number: 2 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKCNDEH*LCAQRP
Trigger: GGGCCTCTGGGCACAGAGCCAATGTTCGTCATTGCA...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp TTGCTTCAGTTTTATGGGATGTTTATACATGTGTGTCCTGGGTCATGGCGTACCGGACCTACACTCATCTaGCGCCCGAGGGCTTTGGTA +
Preference number: 2 (lower is better)
Translates to: LLQFYGMFIHVCPGSWRTGPTLI*RPRALV
Trigger: TACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCC...GGTACGCCATGACCCAGGACACACATGTATAAACATCCCATAAAACTGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp TTGCTTCAGTTTTATGGGATGTTTATACATGTGTGTCCTGGGTCATGGCGTACCGCAAATCCTCACCCCTaGACGCTGGTCTCATGGCCA +
Preference number: 2 (lower is better)
Translates to: LLQFYGMFIHVCPGSWRTANPHP*TLVSWP
Trigger: TGGCCATGAGACCAGCGTCCAGGGGTGAGGATTTGC...GGTACGCCATGACCCAGGACACACATGTATAAACATCCCATAAAACTGAAGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTAGGCCATGATGGTAGCTaGTTGCTAAATTTACATAAC +
Preference number: 2 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVGHDGS*LLNLHN
Trigger: GTTATGTAAATTTAGCAATCAGCTACCATCATGGCC...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR TCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTCTCCCTCAGGGCCGCTaGCCCCACTCAGGGACAAGG +
Preference number: 2 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCLPQGR*PHSGTR
Trigger: CCTTGTCCCTGAGTGGGGTCAGCGGCCCTGAGGGAG...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp TCTGGGTTGACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACTCACACTATGGAGAATaGCTGCTGTGTGAGCCCCCA +
Preference number: 2 (lower is better)
Translates to: SGLTGLTEEWGKIVATIYSHYGE*LLCEPP
Trigger: TGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGA...GTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGTCAACCCAGA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR CAA 90 bp TTCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTaGGCACTACGTGTGGTTACTCAGAACAACAGAGAATGTGAGTTC +
Preference number: 2 (lower is better)
Translates to: FFSQRLAQTTKVHLG*ALRVVTQNNRECEF
Trigger: GAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAATGGTCCTGGATGTACTaGAAGATGTCCATCTCGTCC +
Preference number: 2 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKWSWMY*KMSISS
Trigger: GGACGAGATGGACATCTTGCAGTACATCCAGGACCA...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp TTGCTTCAGTTTTATGGGATGTTTATACATGTGTGTCCTGGGTCATGGCGTACCACAGCACCCCTGGCCTaGTCTGATTCCACTGAAAGA +
Preference number: 2 (lower is better)
Translates to: LLQFYGMFIHVCPGSWRTTAPLA*SDSTER
Trigger: TCTTTCAGTGGAATCAGACCAGGCCAGGGGTGCTGT...GGTACGCCATGACCCAGGACACACATGTATAAACATCCCATAAAACTGAAGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp ATGAGGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGTGTGAAAAGAAAGACTaGTTGTGCACACAAAGTTCT +
Preference number: 2 (lower is better)
Translates to: MRGTDDSLQGLHALVSHKCEKKD*LCTQSS
Trigger: AGAACTTTGTGTGCACAACCAGTCTTTCTTTTCACA...CTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCCTCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CAA 90 bp ACATCCTGTCCATGGGCTCACAACAGGCTTCGAAATAAACAAGTGTaGTTGTCCCCAGTTAAACTTCTGTTTCCCTTCCACAGGGAACTC +
Preference number: 2 (lower is better)
Translates to: TSCPWAHNRLRNKQV*LSPVKLLFPFHREL
Trigger: GAGTTCCCTGTGGAAGGGAAACAGAAGTTTAACTGGGGACAACAACACTTGTTTATTTCGAAGCCTGTTGTGAGCCCATGGACAGGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp TGGATGAGCTCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTaGGCCTGGAGAGAGCTAGCCCAGCTTTATTTAAAAAGCCATTCA +
Preference number: 2 (lower is better)
Translates to: WMSSACGKTNDMIGQ*AWRELAQLYLKSHS
Trigger: TGAATGGCTTTTTAAATAAAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGAGCTCATCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 90 bp CCGCCTGCCAGCCAGGATAGCTCTGAGTGTCACCAGCTCTCCAGTTaGTGCCACATGTTATCTAAGGAGTCATTTCACTATTTAATAAAG +
Preference number: 2 (lower is better)
Translates to: PPASQDSSECHQLSS*CHMLSKESFHYLIK
Trigger: CTTTATTAAATAGTGAAATGACTCCTTAGATAACATGTGGCACAAACTGGAGAGCTGGTGACACTCAGAGCTATCCTGGCTGGCAGGCGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR TCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTACTAGTGGATTTCAGTTaGCAGAACTCTCTACTTCAG +
Preference number: 2 (lower is better)
Translates to: SACGKTNDMIGQLAWRELLVDFS*QNSLLQ
Trigger: CTGAAGTAGAGAGTTCTGTCAACTGAAATCCACTAG...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCACAGGAGAGAGAGACTTaGATCAGAACACTCCAGACA +
Preference number: 2 (lower is better)
Translates to: EKNITNTGWNGSQAQALSQERET*IRTLQT
Trigger: TGTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTG...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTGACAGGCCCGCAGCCTaGACTACTGAGCTGTCACGG +
Preference number: 2 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRIDRPAA*TTELSR
Trigger: CCGTGACAGCTCAGTAGTGCAGGCTGCGGGCCTGTC...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR GCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTCTTGCTGTGCCCAGGTaGCGCAGGACCCCAGATCTC +
Preference number: 2 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCLAVPR*RRTPDL
Trigger: GAGATCTGGGGTCCTGCGGCACCTGGGCACAGCAAG...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTACTCTTTCTTTCTACATaGGTCTTGGCTGTGCAGTTA +
Preference number: 2 (lower is better)
Translates to: SACGKTNDMIGQLAWRELLFLST*VLAVQL
Trigger: TAACTGCACAGCCAAGACCCATGTAGAAAGAAAGAG...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR GCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTCCAGTCCCAGAGACATaGACACCACCAAGGGCACGC +
Preference number: 2 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRIPVPET*TPPRAR
Trigger: GCGTGCCCTTGGTGGTGTGCATGTCTCTGGGACTGG...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 90 bp GGCTGTGATTTTAGGAGAGAATTCTACATGCTGATGAAGTTGAACTaGCTTCTGCCTAATTTCTACTGGGCTCTAATTCCTTTCTGCGGC +
Preference number: 2 (lower is better)
Translates to: GCDFRREFYMLMKLN*LLPNFYWALIPFCG
Trigger: GCCGCAGAAAGGAATTAGAGCCCAGTAGAAATTAGGCAGAAGCAAGTTCAACTTCATCAGCATGTAGAATTCTCTCCTAAAATCACAGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTAAAACAGGGGCGACATaGAGCAGCAATCGGGACAGA +
Preference number: 2 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRIKTGAT*SSNRDR
Trigger: TCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTT...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 90 bp AGAGTGGGCTGTGATTTTAGGAGAGAATTCTACATGCTGATGAAGTaGAACTTGCTTCTGCCTAATTTCTACTGGGCTCTAATTCCTTTC +
Preference number: 2 (lower is better)
Translates to: RVGCDFRREFYMLMK*NLLLPNFYWALIPF
Trigger: GAAAGGAATTAGAGCCCAGTAGAAATTAGGCAGAAGCAAGTTCAACTTCATCAGCATGTAGAATTCTCTCCTAAAATCACAGCCCACTCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 90 bp TTTATCCATTCACCAGCCGAGAGGCTTTTCCATTGTTTCCACTTTTaGGCTGTGATAAATAAAGCTGCTATGAACATCTGTGTACAAGCC +
Preference number: 2 (lower is better)
Translates to: FIHSPAERLFHCFHF*AVINKAAMNICVQA
Trigger: GGCTTGTACACAGATGTTCATAGCAGCTTTATTTATCACAGCCAAAAAGTGGAAACAATGGAAAAGCCTCTCGGCTGGTGAATGGATAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTGTTTGGCACTACGTGTaGTTACTCAGAACAACAGAG +
Preference number: 2 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCVWHYV*LLRTTE
Trigger: CTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAAC...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 90 bp CAACCTCTGCTTGAAGCAACCATTAATCTTTCTGTCTCTGTAGATTaGTCCTGGAAATTTCCTATACATAGAATCATACAATACGTGGTC +
Preference number: 2 (lower is better)
Translates to: QPLLEATINLSVSVD*SWKFPIHRIIQYVV
Trigger: GACCACGTATTGTATGATTCTATGTATAGGAAATTTCCAGGACAAATCTACAGAGACAGAAAGATTAATGGTTGCTTCAAGCAGAGGTTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CCA 90 bp TCTTACAGATATAATGAGATCATGCAAGCAAATGCTAACTTAGTTCCCAGCATTAAAAGAGATTGTAAATaGCCAGAGATGTATGGCTGG +
Preference number: 2 (lower is better)
Translates to: SYRYNEIMQANANLVPSIKRDCK*PEMYGW
Trigger: CCAGCCATACATCTCTGGCCATTTACAATCTCTTTT...AATGCTGGGAACTAAGTTAGCATTTGCTTGCATGATCTCATTATATCTGTAAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp CGCCTCGCCGCGGCCACGGCGGGGAAGGACCGAGGCTaGTTGCATGGAAATGGTGGCCGCTCCAGGAGAGCC +
Preference number: 3 (lower is better)
Translates to: RLAAATAGKDRG*LHGNGGRSRRA
Trigger: GGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCGGCGAGGCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp CACCCACTACTCTGGCTGCCTCTCCCTCAGGGCCGCTaGCCCCACTCAGGGACAAGGCCAGCCACGGAGGGC +
Preference number: 3 (lower is better)
Translates to: HPLLWLPLPQGR*PHSGTRPATEG
Trigger: GCCCTCCGTGGCTGGCCTTGTCCCTGAGTGGGGTCAGCGGCCCTGAGGGAGAGGCAGCCAGAGTAGTGGGTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp TCGCCGCGGCCACGGCGGGGAAGGACCGAGGCTGGTTaGATGGAAATGGTGGCCGCTCCAGGAGAGCCCAGA +
Preference number: 3 (lower is better)
Translates to: SPRPRRGRTEAG*MEMVAAPGEPR
Trigger: TCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCGGCGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp AGAAAAGCCAGGCCGGCCTGGGCTCCGGCTTTGTGCTaGCGACTCCCACCCTCCCAGCAGCCCTGCCGTGGA +
Preference number: 3 (lower is better)
Translates to: RKARPAWAPALC*RLPPSQQPCRG
Trigger: TCCACGGCAGGGCTGCTGGGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCAGGCCGGCCTGGCTTTTCT
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp GGGCAGGGCAAGCTGGGAAACGGGTGCCGCTGCATCTaGACAGGAACCAAGCGCACGGGAGGGAGAGGGGTG +
Preference number: 3 (lower is better)
Translates to: GQGKLGNGCRCI*TGTKRTGGRGV
Trigger: CACCCCTCTCCCTCCCGTGCGCTTGGTTCCTGTGCAGATGCAGCGGCACCCGTTTCCCAGCTTGCCCTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp GAGCTACTTCCCCCAACACACCAGGCCAAGGCCTCGTaGCCCAGATCCCTGCGAGGGGGCGACCTGGGATGC +
Preference number: 3 (lower is better)
Translates to: ELLPPTHQAKAS*PRSLRGGDLGC
Trigger: GCATCCCAGGTCGCCCCCTCGCAGGGATCTGGGCCACGAGGCCTTGGCCTGGTGTGTTGGGGGAAGTAGCTC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp CGCGGCCACGGCGGGGAAGGACCGAGGCTGGTTGCATaGAAATGGTGGCCGCTCCAGGAGAGCCCAGAGCTA +
Preference number: 3 (lower is better)
Translates to: RGHGGEGPRLVA*KWWPLQESPEL
Trigger: TAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAAGGCCCTGGAGTAATTaGGCTTGGGGACGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRRPWSN*AWGRPH
Trigger: GTGGGGACGTCCCCAAGCCAAATTACTCCAGGGCCT...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR GCA 72 bp TCGTCCATGGCTTGGATCTGCTCCTGCGGCTTCTGCTaGCCAGCCACAGCTTCAGCCGGGCCCGCTTTGGGG +
Preference number: 3 (lower is better)
Translates to: SSMAWICSCGFC*PATASAGPALG
Trigger: CCCCAAAGCGGGCCCGGCTGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CGCCGCGTACCCTTTCCCAGTGCAAATCCTCACCCCTaGACGCTGGTCTCATGGCCACCCTGCAGCCCACCC +
Preference number: 3 (lower is better)
Translates to: RRVPFPSANPHP*TLVSWPPCSPP
Trigger: GGGTGGGCTGCAGGGTGGCCATGAGACCAGCGTCCAGGGGTGAGGATTTGCACTGGGAAAGGGTACGCGGCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp GACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTaGGAGAATCATGCCCCACTGGCAGTGGGAGGCGGT +
Preference number: 3 (lower is better)
Translates to: DPEDDEGLGAEA*ENHAPLAVGGG
Trigger: ACCGCCTCCCACTGCCAGTGGGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 72 bp CCCACACTAGCCGGACAGGCCCGCAGCCTGCACTACTaGGCTGTCACGGAGGACTCTACCAAGCCCCAGTGC +
Preference number: 3 (lower is better)
Translates to: PTLAGQARSLHY*AVTEDSTKPQC
Trigger: GCACTGGGGCTTGGTAGAGTCCTCCGTGACAGCTCAGTAGTGCAGGCTGCGGGCCTGTCCGGCTAGTGTGGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp AGGGGTGGGAGTCCGGCACCAGCAGTGGTGAGAACCTaGCTTGTCCTGGGGGCATCTGTGAGACCAGGGCCT +
Preference number: 3 (lower is better)
Translates to: RGGSPAPAVVRT*LVLGASVRPGP
Trigger: AGGCCCTGGTCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTCCCACCCCT
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR GCA 72 bp GTGCCGCAGGACCCCAGATCTCAGGCCTGTTTCTGCTaGAGCTCCCTGAGCGCCGCGTACCCTTTCCCAGTG +
Preference number: 3 (lower is better)
Translates to: VPQDPRSQACFC*SSLSAAYPFPV
Trigger: CACTGGGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCAC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp GTCAGCAGGACCCTGCGCCCTCAGAGGGTCCTTCTTTaGCTCTTCCAGTTCCTGGCGTTCCCCCGCTGGTGG +
Preference number: 3 (lower is better)
Translates to: VSRTLRPQRVLL*LFQFLAFPRWW
Trigger: CCACCAGCGGGGGAACGCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTGAGGGCGCAGGGTCCTGCTGAC
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR GCA 72 bp ACACGTCCTCCGAGGGGTCCTGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCT +
Preference number: 3 (lower is better)
Translates to: TRPPRGPVETAS*PGQRAPHQGPP
Trigger: AGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAGGACGTGT
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTaGCCGCTCCAGGAGAGCCCAGAGCTAAGCCCAGAC +
Preference number: 3 (lower is better)
Translates to: GGEGPRLVAWKW*PLQESPELSPD
Trigger: GTCTGGGCTTAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp CACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATaGTGGCCGCTCCAGGAGAGCCCAGAGCTAAGCCCA +
Preference number: 3 (lower is better)
Translates to: HGGEGPRLVAWK*WPLQESPELSP
Trigger: TGGGCTTAGCTCTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp CTTTGCCTCTTCCAGTTCCTGGCGTTCCCCCGCTGGTaGCAGCACCACGCCCATCCCTGCCTCAGCCTTCAC +
Preference number: 3 (lower is better)
Translates to: LCLFQFLAFPRW*QHHAHPCLSLH
Trigger: GTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAGGAACTGGAAGAGGCAAAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR-3UTR CAA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTAGCCGGGGCGAGGGCTaGGCTTTCACGGCCACTTTG +
Preference number: 3 (lower is better)
Translates to: REGTKPRGELEPPLGGRPSRGEG*AFTATL
Trigger: CAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCT...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp AGGAGGAGCGACTGCAGGGCACTTGCTGTGCCCAGGTaGCGCAGGACCCCAGATCTCAGGCCTGTTTCTGCT +
Preference number: 3 (lower is better)
Translates to: RRSDCRALAVPR*RRTPDLRPVSA
Trigger: AGCAGAAACAGGCCTGAGATCTGGGGTCCTGCGGCACCTGGGCACAGCAAGTGCCCTGCAGTCGCTCCTCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp ATCTCGTCCATGGCTTGGATCTGCTCCTGCGGCTTCTaGTGCCCAGCCACAGCTTCAGCCGGGCCCGCTTTG +
Preference number: 3 (lower is better)
Translates to: ISSMAWICSCGF*CPATASAGPAL
Trigger: CAAAGCGGGCCCGGCTGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGAT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp AGGCCTCGTGGCCCAGATCCCTGCGAGGGGGCGACCTaGGATGCTCAGGGCTTTTCTCAGATTCCAGGGAAG +
Preference number: 3 (lower is better)
Translates to: RPRGPDPCEGAT*DAQGFSQIPGK
Trigger: CTTCCCTGGAATCTGAGAAAAGCCCTGAGCATCCCAGGTCGCCCCCTCGCAGGGATCTGGGCCACGAGGCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp TCTGCTGCCCAGCCACAGCTTCAGCCGGGCCCGCTTTaGGGGGAACAGCTGGTTTTCTGGGTATCACCGGCT +
Preference number: 3 (lower is better)
Translates to: SAAQPQLQPGPL*GEQLVFWVSPA
Trigger: AGCCGGTGATACCCAGAAAACCAGCTGTTCCCCCCAAAGCGGGCCCGGCTGAAGCTGTGGCTGGGCAGCAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCACCACAGAGTGGGGCAGGGCCTGCATGCCTaGGTGTCACATAAGCCGTTC +
Preference number: 3 (lower is better)
Translates to: SRDSPSALRDAKGHHRVGQGLHA*VSHKPF
Trigger: GAACGGCTTATGTGACACCAAGGCATGCAGGCCCTG...CCCCACTCTGTGGTGCCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 72 bp CTCCCTGGGAAGGCAGCTCCACTGGTGAAAGGCCACTaGCCAAGTCCAGACCCTGAGGACGACGAAGGCCTC +
Preference number: 3 (lower is better)
Translates to: LPGKAAPLVKGH*PSPDPEDDEGL
Trigger: GAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGGTCAGTGGCCTTTCACCAGTGGAGCTGCCTTCCCAGGGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR GCA 72 bp CAGCCAGGCTGTGAGAACACAGCTTTCCCGGGATACTaGAGGTCCCTAGGGCTGGTTGGAGGAGGCAGAGGG +
Preference number: 3 (lower is better)
Translates to: QPGCENTAFPGY*RSLGLVGGGRG
Trigger: CCCTCTGCCTCCTCCAACCAGCCCTAGGGACCTGCAGTATCCCGGGAAAGCTGTGTTCTCACAGCCTGGCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR CCA 72 bp GCACGTGCATTGTGCCTGCGGTTGCATGGATGCTGCTaGGACGGGGTCAGAAGAGAGCCCCAGCAGATGGAG +
Preference number: 3 (lower is better)
Translates to: ARALCLRLHGCC*DGVRREPQQME
Trigger: CTCCATCTGCTGGGGCTCTCTTCTGACCCCGTCCCAGCAGCATCCATGCAACCGCAGGCACAATGCACGTGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp CCAGCATGGAAGGGTCAGAAGAGGCTGGGGGCGGCCTaGGCTGGTGTATCGTGGTCCTGGATGTACTGCAAG +
Preference number: 3 (lower is better)
Translates to: PAWKGQKRLGAA*AGVSWSWMYCK
Trigger: CTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCTCTTCTGACCCTTCCATGCTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp CGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTaGGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTT +
Preference number: 3 (lower is better)
Translates to: RGIRHIGLWLLG*EPLPQPAGFYF
Trigger: AAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 72 bp TCCACTGGTGAAAGGCCACTGACCAAGTCCAGACCCTaGGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGA +
Preference number: 3 (lower is better)
Translates to: STGERPLTKSRP*GRRRPRGRSLR
Trigger: TCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGGTCAGTGGCCTTTCACCAGTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR GCA 72 bp CCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATaGCTGCTGTGTGAGCCCCCACCTGACAGCCAGACG +
Preference number: 3 (lower is better)
Translates to: PGRPWMGSHYGE*LLCEPPPDSQT
Trigger: CGTCTGGCTGTCAGGTGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR GCA 72 bp AGATGGCGTGGGGTCCTGGCTCTGCCATCTGCAGGCTaGAGGAACGTGGACGAACCACCTGACCCTGAACTT +
Preference number: 3 (lower is better)
Translates to: RWRGVLALPSAG*RNVDEPPDPEL
Trigger: AAGTTCAGGGTCAGGTGGTTCGTCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGGACCCCACGCCATCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp AAGGCACGTGCATTGTGCCTGCGGTTGCATGGATGCTaGTGGGACGGGGTCAGAAGAGAGCCCCAGCAGATG +
Preference number: 3 (lower is better)
Translates to: KARALCLRLHGC*WDGVRREPQQM
Trigger: CATCTGCTGGGGCTCTCTTCTGACCCCGTCCCAGCAGCATCCATGCAACCGCAGGCACAATGCACGTGCCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp TCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTaGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCA +
Preference number: 3 (lower is better)
Translates to: SLPFMSTGNKTH*ALAPRVRAAPA
Trigger: TGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR CCA 72 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTaGTGTCACATAAGCCGTTCCTGGAAAGAGGCGGCC +
Preference number: 3 (lower is better)
Translates to: GVQMTASRACMP*CHISRSWKEAA
Trigger: GGCCGCCTCTTTCCAGGAACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 72 bp ACCGGCTTAGCTGCCACTGGTGGCTTGGGCTTAAGCTaGGGCTTGGGTTTGGGCTCAGCTCCCAGGTTCAGA +
Preference number: 3 (lower is better)
Translates to: TGLAATGGLGLS*GLGLGSAPRFR
Trigger: TCTGAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGCTTAAGCCCAAGCCACCAGTGGCAGCTAAGCCGGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp AGGCTGGGGGCGGCCTGGGCTGGTGTATCGTGGTCCTaGATGTACTGCAAGATGTCCATCTCGTCCATGGCT +
Preference number: 3 (lower is better)
Translates to: RLGAAWAGVSWS*MYCKMSISSMA
Trigger: AGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CAGAAGAGGCTGGGGGCGGCCTGGGCTGGTGTATCGTaGTCCTGGATGTACTGCAAGATGTCCATCTCGTCC +
Preference number: 3 (lower is better)
Translates to: QKRLGAAWAGVS*SWMYCKMSISS
Trigger: GGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGCCCCCAGCCTCTTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTaGACAATAAGGCCACAGGGCCCCAGAGAGTGGCTG +
Preference number: 3 (lower is better)
Translates to: APSMSTQRPGGR*TIRPQGPREWL
Trigger: CAGCCACTCTCTGGGGCCCTGTGGCCTTATTGTCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp TGCCCAGTGGCCTGCCACCTCCTGTTAGGAGCTAGCTaGTACCGGGCAGGGAAGTCCCTCTGTGAGGATCTA +
Preference number: 3 (lower is better)
Translates to: CPVACHLLLGAS*YRAGKSLCEDL
Trigger: TAGATCCTCACAGAGGGACTTCCCTGCCCGGTACCAGCTAGCTCCTAACAGGAGGTGGCAGGCCACTGGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CCAGCCACAGAGGAGGGTGGATATCTGTGTACCGCGTaGGATTCTGTGTGTCGCAGCGCCAGGCCTGGCATA +
Preference number: 3 (lower is better)
Translates to: PATEEGGYLCTA*DSVCRSARPGI
Trigger: TATGCCAGGCCTGGCGCTGCGACACACAGAATCCCACGCGGTACACAGATATCCACCCTCCTCTGTGGCTGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACCGCAGGCTTCTACTTaGGCCCCACAGCCCCGGAGA +
Preference number: 3 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRPQAST*APQPRR
Trigger: TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCATCTCGTCCATGGCTaGGATCTGCTCCTGCGGCTT +
Preference number: 3 (lower is better)
Translates to: STVWCLDLCTSALGVGRSHLVHG*DLLLRL
Trigger: AAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp GCAGAACCCGTGGGCATGAAGCTTCCCTGCCCCATGTaGCACCTCGCTACGGCCCCACATGTCTTGCTTCAT +
Preference number: 3 (lower is better)
Translates to: AEPVGMKLPCPM*HLATAPHVLLH
Trigger: ATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTCACATGGGGCAGGGAAGCTTCATGCCCACGGGTTCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR TCA 72 bp ACCCCAGATCTCAGGCCTGTTTCTGCTGCAGCTCCCTaGGCGCCGCGTACCCTTTCCCAGTGCAAATCCTCA +
Preference number: 3 (lower is better)
Translates to: TPDLRPVSAAAP*APRTLSQCKSS
Trigger: TGAGGATTTGCACTGGGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTGAGATCTGGGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp GCCAGGGAAGGCCCTAGGGACTTTCCAGAACTGGCCTaGGTTCCCGGCTTCCTAAGAGGAACAATGCCGGGA +
Preference number: 3 (lower is better)
Translates to: AREGPRDFPELA*VPGFLRGTMPG
Trigger: TCCCGGCATTGTTCCTCTTAGGAAGCCGGGAACTCAGGCCAGTTCTGGAAAGTCCCTAGGGCCTTCCCTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp GTGAATGGCCCTGTGTGGAGGCAGGGCCAAGGTGAATaGTCCTGCTATGCAGATGATGCAGCCCAGAGAGCC +
Preference number: 3 (lower is better)
Translates to: VNGPVWRQGQGE*SCYADDAAQRA
Trigger: GGCTCTCTGGGCTGCATCATCTGCATAGCAGGAGCATTCACCTTGGCCCTGCCTCCACACAGGGCCATTCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp GGGTCTGAGGTCCTAGTCCCACCCGCTCAATGCTTCTaGCAGGCAGGACAGGGCCAAGGAGCAATAGTGGTT +
Preference number: 3 (lower is better)
Translates to: GSEVLVPPAQCF*QAGQGQGAIVV
Trigger: AACCACTATTGCTCCTTGGCCCTGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGACTAGGACCTCAGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp CACACAGCCAAGCTGGACTGGAACCCTGGCCGTTTGTaGCCACAGAACCTGGCTGCTGCTTCACAGGATGCT +
Preference number: 3 (lower is better)
Translates to: HTAKLDWNPGRL*PQNLAAASQDA
Trigger: AGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp CTGTTGACAGGCCTGTTGATCACTTGCCCAGTGGCCTaGCACCTCCTGTTAGGAGCTAGCTGGTACCGGGCA +
Preference number: 3 (lower is better)
Translates to: LLTGLLITCPVA*HLLLGASWYRA
Trigger: TGCCCGGTACCAGCTAGCTCCTAACAGGAGGTGGCAGGCCACTGGGCAAGTGATCAACAGGCCTGTCAACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp CACAGGGGGCATGCCTTGCAGAATGGAATGGGCCTCTaGTTGCTGCTGAATGCCACGTGCTCAGGACAGGTG +
Preference number: 3 (lower is better)
Translates to: HRGHALQNGMGL*LLLNATCSGQV
Trigger: CACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGGTCCTGGCTCTGCCATCTGCAGGCTGCAGGAACGTaGACGAACCACCTGACCCTGAACTTGAGTTTCCCA +
Preference number: 3 (lower is better)
Translates to: GSWLCHLQAAGT*TNHLTLNLSFP
Trigger: TGGGAAACTCAAGTTCAGGGTCAGGTGGTTCGTCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGGACCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp ACCAGGTTTAAAAGACAAAGAAAAGCCAGGCCGGCCTaGGCTCCGGCTTTGTGCTGGCGACTCCCACCCTCC +
Preference number: 3 (lower is better)
Translates to: TRFKRQRKARPA*APALCWRLPPS
Trigger: GGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCAGGCCGGCCTGGCTTTTCTTTGTCTTTTAAACCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp AGGGCCTGCATGCCTTGGTGTCACATAAGCCGTTCCTaGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGG +
Preference number: 3 (lower is better)
Translates to: RACMPWCHISRS*KEAAWLPLNPR
Trigger: CCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGACACCAAGGCATGCAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 72 bp GAGGGGATATCACACAGCCAAGCTGGACTGGAACCCTaGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTC +
Preference number: 3 (lower is better)
Translates to: EGISHSQAGLEP*PFVPTEPGCCF
Trigger: GAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGATATCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGAAAGGCCTGCCGCGTaGGGCCAGGCTGATAAGGAG +
Preference number: 3 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSERPAA*GQADKE
Trigger: CTCCTTATCAGCCTGGCCCAACGCGGCAGGCCTTTC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGGCTTTCACGGCCACTTaGGGATGTTTCTTGGGCTTC +
Preference number: 3 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGAFTAT*GCFLGF
Trigger: GAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAGC...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTACTGGGGCTGGGGACTaGACTGAGCTGTTGACAGGC +
Preference number: 3 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGTGAGD*TELLTG
Trigger: GCCTGTCAACAGCTCAGTCAAGTCCCCAGCCCCAGT...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAGGGCTGGGCTTCTGGTaGGCAAGGCATCCCCACACC +
Preference number: 3 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGGLGFW*ARHPHT
Trigger: GGTGTGGGGATGCCTTGCCAACCAGAAGCCCAGCCC...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCTCAGGAGAGAGAGACTaGCATCAGAACACTCCAGAC +
Preference number: 3 (lower is better)
Translates to: QTLRTTKASGQKPERIMPSGERD*HQNTPD
Trigger: GTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTGA...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCCAGGGCTCCGTTTCTaGACCTGTGCCCACAGTGGA +
Preference number: 3 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSPGLRF*TCAHSG
Trigger: TCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTGG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGTGTTTCTTGGGCTTCTaGGAGCGCATAATGCCCAGA +
Preference number: 3 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGCFLGF*ERIMPR
Trigger: TCTGGGCATTATGCGCTCCAAGAAGCCCAAGAAACA...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp GCTGATGCCAGTGCAGGCCTCCAGGGCTCCGTTTCTTaGCCTGTGCCCACAGTGGATCCTGAAAGCAGTTTG +
Preference number: 3 (lower is better)
Translates to: ADASAGLQGSVS*PVPTVDPESSL
Trigger: CAAACTGCTTTCAGGATCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTGGAGGCCTGCACTGGCATCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp GCCTTGGGGACATGTAAATACCAGAAGCCGTCACGGTaGCTCAGGCTTGGCGGGCACTTGCAGGGCTGTCTA +
Preference number: 3 (lower is better)
Translates to: ALGTCKYQKPSR*LRLGGHLQGCL
Trigger: TAGACAGCCCTGCAAGTGCCCGCCAAGCCTGAGTCACCGTGACGGCTTCTGGTATTTACATGTCCCCAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 72 bp TCTACATGGGTCTTGGCTGTGCAGTTACTGGCCCGATaGCCACACTGGGCCTGGGACTCTATGCCTCCTCTG +
Preference number: 3 (lower is better)
Translates to: STWVLAVQLLAR*PHWAWDSMPPL
Trigger: CAGAGGAGGCATAGAGTCCCAGGCCCAGTGTGGTCATCGGGCCAGTAACTGCACAGCCAAGACCCATGTAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp AGGCCGAGGTGGAAACCCAACTTCAAGGTACGGCTCTaGCACACACACAGCTCTGGAACACACACGGCTCTG +
Preference number: 3 (lower is better)
Translates to: RPRWKPNFKVRL*HTHSSGTHTAL
Trigger: CAGAGCCGTGTGTGTTCCAGAGCTGTGTGTGTGGCAGAGCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp CAGAGTACGAAAAGGCACGTGCATTGTGCCTGCGGTTaGATGGATGCTGCTGGGACGGGGTCAGAAGAGAGC +
Preference number: 3 (lower is better)
Translates to: QSTKRHVHCACG*MDAAGTGSEES
Trigger: GCTCTCTTCTGACCCCGTCCCAGCAGCATCCATGCAACCGCAGGCACAATGCACGTGCCTTTTCGTACTCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp GGCCAGAAGTCTGAAGTTGAGGTGTCAGCAGGACCCTaGGCCCTCAGAGGGTCCTTCTTTGCCTCTTCCAGT +
Preference number: 3 (lower is better)
Translates to: GQKSEVEVSAGP*ALRGSFFASSS
Trigger: ACTGGAAGAGGCAAAGAAGGACCCTCTGAGGGCGCAGGGTCCTGCTGACACCTCAACTTCAGACTTCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415264.5
3UTR GCA 72 bp GCGGCCTGGGCTGGTGTATCGTGGTCCTGGATGTACTaGAAGATGTCCATCTCGTCCATGGCTTGGATCTGC +
Preference number: 3 (lower is better)
Translates to: AAWAGVSWSWMY*KMSISSMAWIC
Trigger: GCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACCACGATACACCAGCCCAGGCCGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp GAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTaGTTCACAGGATGCTGTGGGCTGCATGAGAACTCA +
Preference number: 3 (lower is better)
Translates to: EPWPFVPTEPGC*FTGCCGLHENS
Trigger: TGAGTTCTCATGCAGCCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp AGCTCTAGGAATGGGGCTGGCCAGGAAGGCCATGGATaGGGTCACACTATGGAGAATGCCTGCTGTGTGAGC +
Preference number: 3 (lower is better)
Translates to: SSRNGAGQEGHG*GHTMENACCVS
Trigger: GCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCCAGCCCCATTCCTAGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR CCA 72 bp CCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTaGGTGGCACCAAGAGAGATCAACAAGCCCACCTGG +
Preference number: 3 (lower is better)
Translates to: PRRTESPPPKGR*VAPREINKPTW
Trigger: CCAGGTGGGCTTGTTGATCTCTCTTGGTGCCACCCACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp GGTCCTGGATGTACTGCAAGATGTCCATCTCGTCCATaGCTTGGATCTGCTCCTGCGGCTTCTGCTGCCCAG +
Preference number: 3 (lower is better)
Translates to: GPGCTARCPSRP*LGSAPAASAAQ
Trigger: CTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAGGACC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTaGCACGGGCCAGGAGCTGAGACACTCAACACTGAT +
Preference number: 3 (lower is better)
Translates to: GRDQMQDRADRS*HGPGAETLNTD
Trigger: ATCAGTGTTGAGTGTCTCAGCTCCTGGCCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp AGAGAGTCCAGACCACTGAGGAGGTGGCGTCCACAGTaGATGAATACACAACGGGCAGGCCAGGTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: RESRPLRRWRPQ*MNTQRAGQVLP
Trigger: TGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTaGCGTCCACAGTGGATGAATACACAACGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: VMVSRESRPLRR*RPQWMNTQRAG
Trigger: GCCTGCCCGTTGTGTATTCATCCACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGACCCAGGGTGGGTAAGTCTCTTCACTTGGCACTGTaGGGTGAGGGGATATCACACAGCCAAGCTGGACTG +
Preference number: 3 (lower is better)
Translates to: GPRVGKSLHLAL*GEGISHSQAGL
Trigger: CAGTCCAGCTTGGCTGTGTGATATCCCCTCACCCCACAGTGCCAAGTGAAGAGACTTACCCACCCTGGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp TCCTCCCAGGACCCAGGGTGGGTAAGTCTCTTCACTTaGCACTGTGGGGTGAGGGGATATCACACAGCCAAG +
Preference number: 3 (lower is better)
Translates to: SSQDPGWVSLFT*HCGVRGYHTAK
Trigger: CTTGGCTGTGTGATATCCCCTCACCCCACAGTGCCAAGTGAAGAGACTTACCCACCCTGGGTCCTGGGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp TACACAGGGATGGCACAGGGGGCATGCCTTGCAGAATaGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTG +
Preference number: 3 (lower is better)
Translates to: YTGMAQGACLAE*NGPLLAAECHV
Trigger: CACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCATCCCTGTGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTTCAGGAGAGAGAGACTaGCATCAGAACACTCCAGAC +
Preference number: 3 (lower is better)
Translates to: STVWCLDLCTSALGVGRSSGERD*HQNTPD
Trigger: GTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTGA...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATGCCTGGGCTCCGGCTTaGTGCTGGCGACTCCCACCC +
Preference number: 3 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHAWAPA*CWRLPP
Trigger: GGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCAGGC...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp ACCCTGAACTTGAGTTTCCCACCACACAGAAGAGGCTaGTGCCAGTGCAGGCCTCCAGGGCTCCGTTTCTTG +
Preference number: 3 (lower is better)
Translates to: TLNLSFPPHRRG*CQCRPPGLRFL
Trigger: CAAGAAACGGAGCCCTGGAGGCCTGCACTGGCATCAGCCTCTTCTGTGTGGTGGGAAACTCAAGTTCAGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp TCCAGGGAGTCTGGGAAGACCAGCTTTGCAGGCAGGTaGATTTGTTCATACAGGAGCCAGCCTGTCCCAAGG +
Preference number: 3 (lower is better)
Translates to: SRESGKTSFAGR*ICSYRSQPVPR
Trigger: CCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCCAGACTCCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp AGTGCCATGTGGTGCTGGCCCGCGCACTACGAGCCCTaGTTTTTGTGGCATTTCCCCAATTCATCAGCCACA +
Preference number: 3 (lower is better)
Translates to: SAMWCWPAHYEP*FLWHFPNSSAT
Trigger: TGTGGCTGATGAATTGGGGAAATGCCACAAAAAGCAGGGCTCGTAGTGCGCGGGCCAGCACCACATGGCACT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR GCA 72 bp TACTGCAAGATGTCCATCTCGTCCATGGCTTGGATCTaGTCCTGCGGCTTCTGCTGCCCAGCCACAGCTTCA +
Preference number: 3 (lower is better)
Translates to: YCKMSISSMAWI*SCGFCCPATAS
Trigger: TGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp AGAAAAGGGTCTGAGGTCCTAGTCCCACCCGCTCAATaGTTCTGCCAGGCAGGACAGGGCCAAGGAGCAATA +
Preference number: 3 (lower is better)
Translates to: RKGSEVLVPPAQ*FCQAGQGQGAI
Trigger: TATTGCTCCTTGGCCCTGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGACTAGGACCTCAGACCCTTTTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp TCCTGGCCTGAGCAGACCTTCTCAGAATGGCCAAAGTaGCTGTCCTCAGGAGCCAGGACTCCAGCTCAATCT +
Preference number: 3 (lower is better)
Translates to: SWPEQTFSEWPK*LSSGARTPAQS
Trigger: AGATTGAGCTGGAGTCCTGGCTCCTGAGGACAGGCACTTTGGCCATTCTGAGAAGGTCTGCTCAGGCCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp GACTTGACTGAGCTGTTGACAGGCCTGTTGATCACTTaGCCAGTGGCCTGCCACCTCCTGTTAGGAGCTAGC +
Preference number: 3 (lower is better)
Translates to: DLTELLTGLLIT*PVACHLLLGAS
Trigger: GCTAGCTCCTAACAGGAGGTGGCAGGCCACTGGGCAAGTGATCAACAGGCCTGTCAACAGCTCAGTCAAGTC
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CAACAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTaGAAACCCAACTTCAAGGTACGGCTCTGCCACACA +
Preference number: 3 (lower is better)
Translates to: QQAHLGVCERPR*KPNFKVRLCHT
Trigger: TGTGTGGCAGAGCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTGTTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp AGGTGGGTGGCACCAAGAGAGATCAACAAGCCCACCTaGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACT +
Preference number: 3 (lower is better)
Translates to: RWVAPREINKPT*VSVKGRGGNPT
Trigger: AGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTGTTGATCTCTCTTGGTGCCACCCACCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp GAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTGGGTaGCACCAAGAGAGATCAACAAGCCCACCTGGGTGT +
Preference number: 3 (lower is better)
Translates to: EEQKVPHQRAGG*HQERSTSPPGC
Trigger: ACACCCAGGTGGGCTTGTTGATCTCTCTTGGTGCCACCCACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp AATCACTGCACCAAGTATGTCAACACAACGCCCAGGTaGCCGCTGGACAATAAGGCCACAGGGCCCCAGAGA +
Preference number: 3 (lower is better)
Translates to: NHCTKYVNTTPR*PLDNKATGPQR
Trigger: TCTCTGGGGCCCTGTGGCCTTATTGTCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCACGGCCCCACATGTCTaGCTTCATCCTTGGGGCTGG +
Preference number: 3 (lower is better)
Translates to: SVARKPPEARTKQSRILPTAPHV*LHPWGW
Trigger: CCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGT...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGAAAAGGCACGTGCATaGTGCCTGCGGTTGCATGGA +
Preference number: 3 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSEKARA*CLRLHG
Trigger: TCCATGCAACCGCAGGCACAATGCACGTGCCTTTTC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp CACTGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGAAAAGAAAGACTGGTaGTGCACACAAAGTTCTCTC +
Preference number: 3 (lower is better)
Translates to: HWDTWTPRHARPGPAAPQEKKDW*CTQSSL
Trigger: GAGAGAACTTTGTGTGCACAACCAGTCTTTCTTTTC...CTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCAGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 72 bp GAAAGGCCTGCCGCGTTGGGCCAGGCTGATAAGGAGTaGCTATTACAGGCTTGTCCCCATATCACCCACTAC +
Preference number: 3 (lower is better)
Translates to: ERPAALGQADKE*LLQACPHITHY
Trigger: GTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACTCCTTATCAGCCTGGCCCAACGCGGCAGGCCTTTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp CTCAGGGCTGGCTTTGGTGTCTATCAGAAAAGGGTCTaGGGTCCTAGTCCCACCCGCTCAATGCTTCTGCCA +
Preference number: 3 (lower is better)
Translates to: LRAGFGVYQKRV*GPSPTRSMLLP
Trigger: TGGCAGAAGCATTGAGCGGGTGGGACTAGGACCTCAGACCCTTTTCTGATAGACACCAAAGCCAGCCCTGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp CCCAGCTTCCTCCTGACACGTCCCCTCACATGGGAGTaGAACCGACATGGCACTGCTGAAACACACAGAGTA +
Preference number: 3 (lower is better)
Translates to: PSFLLTRPLTWE*NRHGTAETHRV
Trigger: TACTCTGTGTGTTTCAGCAGTGCCATGTCGGTTTCACTCCCATGTGAGGGGACGTGTCAGGAGGAAGCTGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp TTTACCATCTGTGAAAGGGGGATAATCCTGGGGCCCTaGCCACCTCCCAGGCTGATAAAGACTGGACTGGAG +
Preference number: 3 (lower is better)
Translates to: FTICERGIILGP*PPPRLIKTGLE
Trigger: CTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGCCCCAGGATTATCCCCCTTTCACAGATGGTAAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp CTTGCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATaGCACGTGCTCAGGACAGGTGGTAACTGTACTGGG +
Preference number: 3 (lower is better)
Translates to: LAEWNGPLLAAE*HVLRTGGNCTG
Trigger: CCCAGTACAGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp AAACACACAGAGTACACAGGGATGGCACAGGGGGCATaGCTTGCAGAATGGAATGGGCCTCTGCTTGCTGCT +
Preference number: 3 (lower is better)
Translates to: KHTEYTGMAQGA*LAEWNGPLLAA
Trigger: AGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCATCCCTGTGTACTCTGTGTGTTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GCCTCCAGGGCTCCGTTTCTTGACCTGTGCCCACAGTaGATCCTGAAAGCAGTTTGGCGAGTCATGACCTTT +
Preference number: 3 (lower is better)
Translates to: ASRAPFLDLCPQ*ILKAVWRVMTF
Trigger: AAAGGTCATGACTCGCCAAACTGCTTTCAGGATCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTGGAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp GAGCCCCAGCAGATGGAGAGAGCGGTGGTGTTGGGATaGGCCGAGGTGAGGGCTTTTTCTATCTTTAATTGC +
Preference number: 3 (lower is better)
Translates to: EPQQMERAVVLG*AEVRAFSIFNC
Trigger: GCAATTAAAGATAGAAAAAGCCCTCACCTCGGCCCATCCCAACACCACCGCTCTCTCCATCTGCTGGGGCTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp TTCCTAAGAGGAACAATGCCGGGAGGAAGGGAGCAGTaGGACCCCAGCCATAGACAGTACATCCTGTCCATG +
Preference number: 3 (lower is better)
Translates to: FLRGTMPGGREQ*DPSHRQYILSM
Trigger: CATGGACAGGATGTACTGTCTATGGCTGGGGTCCCACTGCTCCCTTCCTCCCGGCATTGTTCCTCTTAGGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTAGGCCCTGGAGTAATTaGGCTTGGGGACGTCCCCAC +
Preference number: 3 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCRPWSN*AWGRPH
Trigger: GTGGGGACGTCCCCAAGCCAAATTACTCCAGGGCCT...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR GCA 72 bp ACATCATTCACTGAGAATTTCCAAAGCACTGTGTGGTaGCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGG +
Preference number: 3 (lower is better)
Translates to: TSFTENFQSTVW*LDLCTSALGVG
Trigger: CCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCTTTGGAAATTCTCAGTGAATGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR CCA 72 bp GGCGACATGGAGCAGCAATCGGGACAGACCATAGGGTaGAAAAGCAGAGTACGAAAAGGCACGTGCATTGTG +
Preference number: 3 (lower is better)
Translates to: GDMEQQSGQTIG*KSRVRKGTCIV
Trigger: CACAATGCACGTGCCTTTTCGTACTCTGCTTTTCCACCCTATGGTCTGTCCCGATTGCTGCTCCATGTCGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp GACAGAAAGGGGTCCTCTTTCTTTCTACATGGGTCTTaGCTGTGCAGTTACTGGCCCGATGACCACACTGGG +
Preference number: 3 (lower is better)
Translates to: DRKGSSFFLHGS*LCSYWPDDHTG
Trigger: CCCAGTGTGGTCATCGGGCCAGTAACTGCACAGCCAAGACCCATGTAGAAAGAAAGAGGACCCCTTTCTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTGGTGGCGTCCCACACTaGATTTCTTATAATATGGAG +
Preference number: 3 (lower is better)
Translates to: GVQMTASRACMPWCHISRGGVPH*ISYNME
Trigger: CTCCATATTATAAGAAATCAAGTGTGGGACGCCACC...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR-3UTR CAA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTAACTCTGAACAGTTCCTaGGAGGCGTCCCTGTGGCTG +
Preference number: 3 (lower is better)
Translates to: SACGKTNDMIGQLAWRELTLNSS*EASLWL
Trigger: CAGCCACAGGGACGCCTCCAAGGAACTGTTCAGAGT...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp ACTTTGCCCCCTCGCTGGGTGGGCTGCATGCTGCCATaGGTCCGTTTAATTTGTTCCCAAACTTGCTTATGC +
Preference number: 3 (lower is better)
Translates to: TLPPRWVGCMLP*VRLICSQTCLC
Trigger: GCATAAGCAAGTTTGGGAACAAATTAAACGGACTCATGGCAGCATGCAGCCCACCCAGCGAGGGGGCAAAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 72 bp TCAGTCAGCTTCCCCAACTGCAAGGCCTTAGGGTGCTaGGCAGGGAATGGTTTGGAGCGATCAGAGTTTGTA +
Preference number: 3 (lower is better)
Translates to: SVSFPNCKALGC*AGNGLERSEFV
Trigger: TACAAACTCTGATCGCTCCAAACCATTCCCTGCTCAGCACCCTAAGGCCTTGCAGTTGGGGAAGCTGACTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp AATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTaGTCAGGACAGGTGGTAACTGTACTGGGTCGAATT +
Preference number: 3 (lower is better)
Translates to: NGMGLCLLLNAT*SGQVVTVLGRI
Trigger: AATTCGACCCAGTACAGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGCTTGGGTTTGGGCTCAGCTCCCAGGTTCAGAATCTaGTCCAAGTCCTCTTCAACTCTGAACAGTTCCTTG +
Preference number: 3 (lower is better)
Translates to: GLGLGSAPRFRI*SKSSSTLNSSL
Trigger: CAAGGAACTGTTCAGAGTTGAAGAGGACTTGGACCAGATTCTGAACCTGGGAGCTGAGCCCAAACCCAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CTGCAAAGGACAGAACTTTATAATGATGGCCCGTGGTaGGTGTCTACACACACAACTGCCTGCCCAGCTTCC +
Preference number: 3 (lower is better)
Translates to: LQRTELYNDGPW*VSTHTTACPAS
Trigger: GGAAGCTGGGCAGGCAGTTGTGTGTGTAGACACCCACCACGGGCCATCATTATAAAGTTCTGTCCTTTGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCAAAGTCCATCTCGGTTaGGCACTACGTGTGGTTACT +
Preference number: 3 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVKVHLG*ALRVVT
Trigger: AGTAACCACACGTAGTGCCAAACCGAGATGGACTTT...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTACTGCTATGTGCTGAGTaGGCAGAGAAGCATCAGGCC +
Preference number: 3 (lower is better)
Translates to: SACGKTNDMIGQLAWRELLLCAE*AEKHQA
Trigger: GGCCTGATGCTTCTCTGCCAACTCAGCACATAGCAG...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTAGAGAGTGGCTGGACTTaGCTGTCTCGTCTGTACCTT +
Preference number: 3 (lower is better)
Translates to: SACGKTNDMIGQLAWRELESGWT*LSRLYL
Trigger: AAGGTACAGACGAGACAGCAAAGTCCAGCCACTCTC...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp ATTCATCAGCCACAGAGCCCCTTTGAAGATAGCCTTTaGCCACCCCACTGTACCACGTTCTGCAGAACACAG +
Preference number: 3 (lower is better)
Translates to: IHQPQSPFEDSL*PPHCTTFCRTQ
Trigger: CTGTGTTCTGCAGAACGTGGTACAGTGGGGTGGTCAAAGGCTATCTTCAAAGGGGCTCTGTGGCTGATGAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 72 bp AGCCTAGGCACAGAAAAGAACATCACTAACACAGGCTaGAATGGGTCACAGGCACAGGCTTTATCAGGCGAC +
Preference number: 3 (lower is better)
Translates to: SLGTEKNITNTG*NGSQAQALSGD
Trigger: GTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTCTGTGCCTAGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GATGAGCTCTGCATGTGGGAAAACAAACGACATGATTaGCCAGTTGGCCTGGAGAGAGCTAGCCCAGCTTTA +
Preference number: 3 (lower is better)
Translates to: DELCMWENKRHD*PVGLERASPAL
Trigger: TAAAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGAGCTCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAATGTAATAACGCTCTCTaGTCCCTAATCAAAACCAGG +
Preference number: 3 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKCNNAL*SLIKTR
Trigger: CCTGGTTTTGATTAGGGACAAGAGAGCGTTATTACA...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTATGTCTCGTCTGTACCTaGTGTGAGAGCTTGAGACTC +
Preference number: 3 (lower is better)
Translates to: SACGKTNDMIGQLAWRELCLVCT*CESLRL
Trigger: GAGTCTCAAGCTCTCACACAAGGTACAGACGAGACA...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp ACAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTaGTCAACTCCTTCCTCGATTTTACCATCTGTGAAA +
Preference number: 3 (lower is better)
Translates to: TALEHTRLWPRS*STPSSILPSVK
Trigger: TTTCACAGATGGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp CACGGGGGTTCTGGGTTGACAGGACTAACCGAGGAGTaGGGTAAAATTGTAGCCACTATTTACTGTGGTTGT +
Preference number: 3 (lower is better)
Translates to: HGGSGLTGLTEE*GKIVATIYCGC
Trigger: ACAACCACAGTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR CCA 72 bp AGTGGGACCCCAGCCATAGACAGTACATCCTGTCCATaGGCTCACAACAGGCTTCGAAATAAACAAGTGTTG +
Preference number: 3 (lower is better)
Translates to: SGTPAIDSTSCP*AHNRLRNKQVL
Trigger: CAACACTTGTTTATTTCGAAGCCTGTTGTGAGCCCATGGACAGGATGTACTGTCTATGGCTGGGGTCCCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GAACTTAGTCCCAGATACATTGTATGGACGTGGTCATaGGACACCAGTACTCAACAGGTAGGTGCTCTCCAG +
Preference number: 3 (lower is better)
Translates to: ELSPRYIVWTWS*DTSTQQVGALQ
Trigger: CTGGAGAGCACCTACCTGTTGAGTACTGGTGTCCCATGACCACGTCCATACAATGTATCTGGGACTAAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGAGGTGAACTTAGTCCCAGATACATTGTATGGACGTaGTCATGGGACACCAGTACTCAACAGGTAGGTGCT +
Preference number: 3 (lower is better)
Translates to: GGELSPRYIVWT*SWDTSTQQVGA
Trigger: AGCACCTACCTGTTGAGTACTGGTGTCCCATGACCACGTCCATACAATGTATCTGGGACTAAGTTCACCTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp AAAAAGCCATTCAGAGGCGGCTGCTATGTGCTGAGTTaGCAGAGAAGCATCAGGCCTCTGAAAGTCAGCAAT +
Preference number: 3 (lower is better)
Translates to: KKPFRGGCYVLS*QRSIRPLKVSN
Trigger: ATTGCTGACTTTCAGAGGCCTGATGCTTCTCTGCCAACTCAGCACATAGCAGCCGCCTCTGAATGGCTTTTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CACCCATACAAGCAGACAGAGCCCAATTTAGGGTCCTaGAACCAACCTAGGTGTAAAATGAAGCCATCTGGG +
Preference number: 3 (lower is better)
Translates to: HPYKQTEPNLGS*NQPRCKMKPSG
Trigger: CCCAGATGGCTTCATTTTACACCTAGGTTGGTTCCAGGACCCTAAATTGGGCTCTGTCTGCTTGTATGGGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp TCAGCAATAAAGAGTCGGCTTACCGAGGCCACATGCTaGGCCCATAATCCCACTTCAGAAGCTGTAGCTTTA +
Preference number: 3 (lower is better)
Translates to: SAIKSRLTEATC*AHNPTSEAVAL
Trigger: TAAAGCTACAGCTTCTGAAGTGGGATTATGGGCTCAGCATGTGGCCTCGGTAAGCCGACTCTTTATTGCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GCACATGGAGGTGAACTTAGTCCCAGATACATTGTATaGACGTGGTCATGGGACACCAGTACTCAACAGGTA +
Preference number: 3 (lower is better)
Translates to: AHGGELSPRYIV*TWSWDTSTQQV
Trigger: TACCTGTTGAGTACTGGTGTCCCATGACCACGTCCATACAATGTATCTGGGACTAAGTTCACCTCCATGTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp GGCCCAGAGAACAGAAGTGAAACTAGAGGCTCAGCATaGCTCCTGGTAGAATTGGCTTTAATGGCTCAAGTT +
Preference number: 3 (lower is better)
Translates to: GPENRSETRGSA*LLVELALMAQV
Trigger: AACTTGAGCCATTAAAGCCAATTCTACCAGGAGCCATGCTGAGCCTCTAGTTTCACTTCTGTTCTCTGGGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp TATGGAGAAAATAGCATCCACCTTAGGGGGCTGTCGTaGAGATTACATAAGAGAGCGTGTAAGGAGTCTGGC +
Preference number: 3 (lower is better)
Translates to: YGENSIHLRGLS*RLHKRACKESG
Trigger: GCCAGACTCCTTACACGCTCTCTTATGTAATCTTCACGACAGCCCCCTAAGGTGGATGCTATTTTCTCCATA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR TCA 72 bp CATTTTCCATTCCACAGCCATGGATTTTATAGACTGTaGGGTCCCGATGCAAATCCTAGGGCCACCCATACA +
Preference number: 3 (lower is better)
Translates to: HFPFHSHGFYRL*GPDANPRATHT
Trigger: TGTATGGGTGGCCCTAGGATTTGCATCGGGACCTCACAGTCTATAAAATCCATGGCTGTGGAATGGAAAATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp GATTACATAAGAGAGCGTGTAAGGAGTCTGGCTTACTaGGTACACAGCAAGGACTCAGGAAATAGGAGCTGT +
Preference number: 3 (lower is better)
Translates to: DYIRERVRSLAY*VHSKDSGNRSC
Trigger: ACAGCTCCTATTTCCTGAGTCCTTGCTGTGTACGCAGTAAGCCAGACTCCTTACACGCTCTCTTATGTAATC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR GCA 72 bp AGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTaGTCTCAAGAAGCTAATCCCAGTGTTACGGCTCTT +
Preference number: 3 (lower is better)
Translates to: SHRADTKNECGS*SQEANPSVTAL
Trigger: AAGAGCCGTAACACTGGGATTAGCTTCTTGAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CCA 72 bp AAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTaGCACTACGTGTGGTTACTCAGAACAACAGAGAAT +
Preference number: 3 (lower is better)
Translates to: KGWHRPPKSISV*HYVWLLRTTEN
Trigger: ATTCTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR-3UTR CAA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATACAGAGGTGATAACGTaGATTCATCAGCACCTTGTC +
Preference number: 3 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHTEVIT*IHQHLV
Trigger: GACAAGGTGCTGATGAATCAACGTTATCACCTCTGT...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp GTGCCCATTACGTGCTTAGTGTTTATGGATGAGCTCTaGATGTGGGAAAACAAACGACATGATTGGCCAGTT +
Preference number: 3 (lower is better)
Translates to: VPITCLVFMDEL*MWENKRHDWPV
Trigger: AACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGAGCTCATCCATAAACACTAAGCACGTAATGGGCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp CTGATGAAGTTGAACTTGCTTCTGCCTAATTTCTACTaGGCTCTAATTCCTTTCTGCGGCAGGACCTACACT +
Preference number: 3 (lower is better)
Translates to: LMKLNLLLPNFY*ALIPFCGRTYT
Trigger: AGTGTAGGTCCTGCCGCAGAAAGGAATTAGAGCCCAGTAGAAATTAGGCAGAAGCAAGTTCAACTTCATCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp TGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTaGAGAGAGCTAGCCCAGCTTTATTTAAAAAGCCAT +
Preference number: 3 (lower is better)
Translates to: CGKTNDMIGQLA*RELAQLYLKSH
Trigger: ATGGCTTTTTAAATAAAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp ATTACGTGCTTAGTGTTTATGGATGAGCTCTGCATGTaGGAAAACAAACGACATGATTGGCCAGTTGGCCTG +
Preference number: 3 (lower is better)
Translates to: ITCLVFMDELCM*ENKRHDWPVGL
Trigger: CAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGAGCTCATCCATAAACACTAAGCACGTAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR-3UTR CAA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTAAATAAACAAGTGTTGTaGTCCCCAGTTAAACTTCTG +
Preference number: 3 (lower is better)
Translates to: SACGKTNDMIGQLAWRELNKQVL*SPVKLL
Trigger: CAGAAGTTTAACTGGGGACAACAACACTTGTTTATT...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp ATAACTCAGTTCATCGTCACAGGAGCCCTAAGAGGTTaGTACGACCATGAGTCCATTTTCACTGAGGAAAAC +
Preference number: 3 (lower is better)
Translates to: ITQFIVTGALRG*YDHESIFTEEN
Trigger: GTTTTCCTCAGTGAAAATGGACTCATGGTCGTATCAACCTCTTAGGGCTCCTGTGACGATGAACTGAGTTAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR GCA 72 bp TTAGAGCATTTCTATCACCCTGGGAAAGATTCTTTGTaGCCTTTTGCAGTCACTGTTAGTTCCAACCTCTGC +
Preference number: 3 (lower is better)
Translates to: LEHFYHPGKDSL*PFAVTVSSNLC
Trigger: GCAGAGGTTGGAACTAACAGTGACTGCAAAAGGGCACAAAGAATCTTTCCCAGGGTGATAGAAATGCTCTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CCA 72 bp ATAATACATTCCTGTGGTTTAAAGCCACCCAGTTTATaGTGCTTTGCCAAGGCAGCTCCAGGAAATGGAACA +
Preference number: 3 (lower is better)
Translates to: IIHSCGLKPPSL*CFAKAAPGNGT
Trigger: TGTTCCATTTCCTGGAGCTGCCTTGGCAAAGCACCATAAACTGGGTGGCTTTAAACCACAGGAATGTATTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR GCA 72 bp CAGGATAGCTCTGAGTGTCACCAGCTCTCCAGTTTGTaGCACATGTTATCTAAGGAGTCATTTCACTATTTA +
Preference number: 3 (lower is better)
Translates to: QDSSECHQLSSL*HMLSKESFHYL
Trigger: TAAATAGTGAAATGACTCCTTAGATAACATGTGGCACAAACTGGAGAGCTGGTGACACTCAGAGCTATCCTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp GGCACTACGTGTGGTTACTCAGAACAACAGAGAATGTaGGTTCAAACAAAGCCTCACCCTTACCAAAATAAA +
Preference number: 3 (lower is better)
Translates to: GTTCGYSEQQRM*VQTKPHPYQNK
Trigger: TTTATTTTGGTAAGGGTGAGGCTTTGTTTGAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAGTGCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp GGAAATAGGGCCTTTGCAGGTATAATTAAAGGGAAATaGGGTCATATCAGATTACAGTGGGCCGTAATCCAA +
Preference number: 3 (lower is better)
Translates to: GNRAFAGIIKGK*GHIRLQWAVIQ
Trigger: TTGGATTACGGCCCACTGTAATCTGATATGACCTCATTTCCCTTTAATTATACCTGCAAAGGCCCTATTTCC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR TCA 72 bp CGGCACACAAGACAATCTCATTTTGGCAGTAAGATGTaGATATTCAAAGGTGCATTCAGAAATTCACAGGGA +
Preference number: 3 (lower is better)
Translates to: RHTRQSHFGSKM*IFKGAFRNSQG
Trigger: TCCCTGTGAATTTCTGAATGCACCTTTGAATATTCACATCTTACTGCCAAAATGAGATTGTCTTGTGTGCCG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CCA 72 bp GCTTCAGTTTTATGGGATGTTTATACATGTGTGTCCTaGGTCATGGCGTACCATATAGTTTTTACTATGGGT +
Preference number: 3 (lower is better)
Translates to: ASVLWDVYTCVS*VMAYHIVFTMG
Trigger: ACCCATAGTAAAAACTATATGGTACGCCATGACCCAGGACACACATGTATAAACATCCCATAAAACTGAAGC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR TCA 72 bp GAAAGCAGTTTGGCGAGTCATGACCTTTCCAAACGTTaGAATAGAATAGAAAATATCCCAGTACAATACACT +
Preference number: 3 (lower is better)
Translates to: ESSLASHDLSKR*NRIENIPVQYT
Trigger: AGTGTATTGTACTGGGATATTTTCTATTCTATTTCAACGTTTGGAAAGGTCATGACTCGCCAAACTGCTTTC
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGGCACGGGCCCTGCCCTaGCGCACGGCTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWARALP*RTAPSP
Trigger: GGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGC...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
3UTR CAA 72 bp CTCGCCGCGGCCACGGCGGGGAAGGACCGAGGCTGGTaGCATGGAAATGGTGGCCGCTCCAGGAGAGCCCAG +
Preference number: 4 (lower is better)
Translates to: LAAATAGKDRGW*HGNGGRSRRAQ
Trigger: CTGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGCCGCGGCGAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGCAGGGGGTCCACGGATaGCACGTCCTCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWQGVHG*HVLRGV
Trigger: GACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTG...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CTGGCGTTCCCCCGCTGGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTTCACCAGGGGGTCCACGGATaGCACGTCCTCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: LAFPRWWQHHAHPCLSLHQGVHG*HVLRGV
Trigger: GACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTG...GTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR TCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAGGAATCTCTGCTGGTaGGCCCTGCAGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWRNLCW*ALQPLG
Trigger: CCCCAGGGGCTGCAGGGCTCACCAGCAGAGATTCCT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGCTCTGGCTCCTAGGGTaGGAGCCGCTCCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGLWLLG*EPLPQP
Trigger: GGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAG...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGCCCAGGCCCCAGGCTaGGCTGTGGGGAAAGCTATG +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRAQAPG*AVGKAM
Trigger: CATAGCTTTCCCCACAGCTCAGCCTGGGGCCTGGGC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
69% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAGTCACCCAGGGGGATaGCCCCGCCGAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWSHPGG*PRRGQD
Trigger: ATCCTGACCTCGGCGGGGCCATCCCCCTGGGTGACT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GTTCCTGGCGTTCCCCCGCTGGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTAGTCACCCAGGGGGATaGCCCCGCCGAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: VPGVPPLVAAPRPSLPQPSHPGG*PRRGQD
Trigger: ATCCTGACCTCGGCGGGGCCATCCCCCTGGGTGACT...AGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAGGAAC
69% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR CCA 90 bp CCTGGCGTTCCCCCGCTGGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTTCAGCCTCTTCCAGTTCCTaGCGTTCCCCCGCTGGTGGC +
Preference number: 4 (lower is better)
Translates to: PGVPPLVAAPRPSLPQPSASSSS*RSPAGG
Trigger: GCCACCAGCGGGGGAACGCCAGGAACTGGAAGAGGC...TGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR GCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCAGGGCCAGTCCCTACTaGTCCTCCACCGGCCCCTGG +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGRASPY*SSTGPW
Trigger: CCAGGGGCCGGTGGAGGAGCAGTAGGGACTGGCCCT...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGGGCCCAGCCCCAGTTTaGGTCTGTGCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGGPAPV*VCAGAG
Trigger: GCCAGCCCCAGCACAGACCCAAACTGGGGCTGGGCC...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
68% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGCACGGGCCCTGCCCTaGCGCACGGCTCCTTCTCCC +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPARALP*RTAPSP
Trigger: GGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp GGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACCAGGAGCACCGCCGGGGACTaGATGACGGCGGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: GTSSGENLPCPGGICETRSTAGD*MTAAGT
Trigger: AGTCCCCGCCGCCGTCATGCAGTCCCCGGCGGTGCT...CCTGGTCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGCCCCGTACCTCCTGGTaGTGGGGCACAGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGPRTSW*WGTVRS
Trigger: CGACCTGACTGTGCCCCAGCACCAGGAGGTACGGGG...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGTCCCACCCGCTCAATaGTTCTGCCAGGCAGGACAG +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRVPPAQ*FCQAGQ
Trigger: CTGTCCTGCCTGGCAGAAGCATTGAGCGGGTGGGAC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGACCACCTACCCCGCTGTaGCCTCTGCTCCTATGTCAC +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRPPTPL*PLLLCH
Trigger: GTGACATAGGAGCAGAGGGCACAGCGGGGTAGGTGG...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGGCCGGGGCGAGGGCTTaGCTTTCACGGCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGAGARA*LSRPLW
Trigger: CCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGC...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTCCGAGGGGTCCTGTaGAGACAGCTTCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGLRGVL*RQLPAR
Trigger: CCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAG...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGCTGGGGCTTGGGTTTaGGCTCAGCTCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRAGAWV*AQLPGS
Trigger: TGAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAAGCGCAGGATCTCATTaGACACGGCTCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRSAGSH*TRLSSP
Trigger: GGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCT...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR TCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGCAGGGGGTCCACGGATaGCACGTCCTCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGQGVHG*HVLRGV
Trigger: GACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTG...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAAGGCAGCTCCACTGGTaGAAGGCCACTGACCAAGTC +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRRQLHW*KATDQV
Trigger: GACTTGGTCAGTGGCCTTTCACCAGTGGAGCTGCCT...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CCAGGACACCCATGGGAAGGGCTTGACGTCTCCACCACTGGGGGCAGGGGTGCTCGGCACCAGCAGTGGTaGGAACCTGCCTTGTCCTGG +
Preference number: 4 (lower is better)
Translates to: PGHPWEGLDVSTTGGRGARHQQW*EPALSW
Trigger: CCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCG...AGCACCCCTGCCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGGTGTCCTGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGGCCAGGTTCTGCCAGTaGCCCCAAGCAGAGCACCAG +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGARFCQ*PQAEHQ
Trigger: CTGGTGCTCTGCTTGGGGTCACTGGCAGAACCTGGC...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGCAGTTACTGGCCCGATaGCCACACTGGGCCTGGGAC +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGQLLAR*PHWAWD
Trigger: GTCCCAGGCCCAGTGTGGTCATCGGGCCAGTAACTG...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGGCTGGGGACTTGACTaGGCTGTTGACAGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRGWGLD*AVDRPV
Trigger: AACAGGCCTGTCAACAGCTCAGTCAAGTCCCCAGCC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTGCCCAGCTTCCTCCTaGCACGTCCCCTCACATGGG +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGCPASS*HVPSHG
Trigger: CCCATGTGAGGGGACGTGTCAGGAGGAAGCTGGGCA...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAACCCTGGCCGTTTGTaGCCACAGAACCTGGCTGCT +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWNPGRL*PQNLAA
Trigger: AGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGGCTTGGGCTTAAGCTaGGGCTTGGGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRGLGLS*GLGLGS
Trigger: TGAGCCCAAACCCAAGCCCCAGCTTAAGCCCAAGCC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCAGGCTGGGGGCGGCCTaGGCTGGTGTATCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARRLGAA*AGVSWS
Trigger: GGACCACGATACACCAGCCCAGGCCGCCCCCAGCCT...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGGGCCCAGCCCCAGTTTaGGTCTGTGCTGGGGCTGGC +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKGPAPV*VCAGAG
Trigger: GCCAGCCCCAGCACAGACCCAAACTGGGGCTGGGCC...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp TACCAAGCCCCAGTGCGGAGCCACAAGTGGAGGACATCCTGTGACCCGAGAAGGCCCAGAGTACAGAGCTaGGGAGGGGGCTGCCCCCGC +
Preference number: 4 (lower is better)
Translates to: YQAPVRSHKWRTSCDPRRPRVQS*GGGCPR
Trigger: GCGGGGGCAGCCCCCTCCCCAGCTCTGTACTCTGGG...CCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CCTCCCCCTCAGCCCCCTTCACCGCCTCTCACCCAATGTGCACCCACAGGCTTCCTGGCCAAGCGCCGCTaGGGACAGGTGGTACCTGAA +
Preference number: 4 (lower is better)
Translates to: PPPQPPSPPLTQCAPTGFLAKRR*GQVVPE
Trigger: TTCAGGTACCACCTGTCCCCAGCGGCGCTTGGCCAG...GAAGCCTGTGGGTGCACATTGGGTGAGAGGCGGTGAAGGGGGCTGAGGGGGAGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGAGGAATCTCTGCTGGTaGGCCCTGCAGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGRNLCW*ALQPLG
Trigger: CCCCAGGGGCTGCAGGGCTCACCAGCAGAGATTCCT...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCCCTCGTCAAAGATGGTaGGCCGGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPPRQRW*AGARAW
Trigger: CCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGG...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCCTTCCCTGCCCCATGTaGCACCTCGCTACGGCCCCA +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARLPCPM*HLATAP
Trigger: TGGGGCCGTAGCGAGGTGTCACATGGGGCAGGGAAG...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GACCAGGGCCTGCCCCACGGGGGTTCTGGGTTGACAGGACTAACCGAGGAGTGGTCACCAGCCAGGCTGTaGGAACACAGCTTTCCCGGG +
Preference number: 4 (lower is better)
Translates to: DQGLPHGGSGLTGLTEEWSPARL*EHSFPG
Trigger: CCCGGGAAAGCTGTGTTCTCACAGCCTGGCTGGTGA...CCACTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTGGGGCAGGCCCTGGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp AGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACCGGAGCTGTCCCCATaGCCCTCTCTGTGGGGGCAC +
Preference number: 4 (lower is better)
Translates to: SPAPAVVRTCLVLGASVRPELSP*PSLWGH
Trigger: GTGCCCCCACAGAGAGGGTCATGGGGACAGCTCCGG...TCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp GACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACCGGCCTGGCTTCCTCTaGATCCCAGGCACAGTCCTG +
Preference number: 4 (lower is better)
Translates to: DTWTPRHARPGPAAPQADRPGFL*IPGTVL
Trigger: CAGGACTGTGCCTGGGATTCAGAGGAAGCCAGGCCG...GTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTAGCACCGCCGGGGACTaGATGACGGCGGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASTAGD*MTAAGT
Trigger: AGTCCCCGCCGCCGTCATGCAGTCCCCGGCGGTGCT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTAGCAGCTCTGGGCTaGCTGCCAACTCGGCATCCT +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGLAALG*LPTRHP
Trigger: AGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAG...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR GCA 90 bp GTTCCCCCGCTGGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTTCACGTGGCCAGAGGGTCCTTCTTTaGCTCTTCCAGTTCCTGGCG +
Preference number: 4 (lower is better)
Translates to: VPPLVAAPRPSLPQPSRGQRVLL*LFQFLA
Trigger: CGCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTG...GCCACGTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAAC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR GCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGCCTTTAGTTCCCACTaGCAGCATCCTCAGAGCCCT +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRAFSSH*QHPQSP
Trigger: AGGGCTCTGAGGATGCTGGCAGTGGGAACTAAAGGC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGACCAACTCGGCATCCTTaGAGACACAGCGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRPTRHP*RHSAGS
Trigger: AGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGG...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCGGGGGCGGCCTGGGCTaGTGTATCGTGGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARGGGLG*CIVVLD
Trigger: ATCCAGGACCACGATACACCAGCCCAGGCCGCCCCC...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGGCCTCCCCTGGGGGTaGGGAGGTTCTGACCCTGCA +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLGLPWG*GGSDPA
Trigger: TGCAGGGTCAGAACCTCCCCACCCCCAGGGGAGGCC...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGTTGGGGCTGGGCTTCTaGTTGGCAAGGCATCCCCAC +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGLGLGF*LARHPH
Trigger: GTGGGGATGCCTTGCCAACCAGAAGCCCAGCCCCAA...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGGGCCCTGGAGTAATTTaGCTTGGGGACGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGGPGVI*LGDVPT
Trigger: GGTGGGGACGTCCCCAAGCCAAATTACTCCAGGGCC...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAAGAAGGCCATGGACTaGGCTGGCCTTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWKKAMD*AGLSWE
Trigger: TTCCCAGGAAAGGCCAGCCCAGTCCATGGCCTTCTT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTATGCCCCACTGGCAGTaGGAGGCGGTGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSMPHWQ*EAVQAG
Trigger: CCCAGCCTGCACCGCCTCCCACTGCCAGTGGGGCAT...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGGCAAATCCTCACCCCTaGACGCTGGTCTCATGGCCA +
Preference number: 4 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRANPHP*TLVSWP
Trigger: TGGCCATGAGACCAGCGTCCAGGGGTGAGGATTTGC...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGCCCTTCCAGGGAGTCTaGGAAGACCAGCTTTGCAGG +
Preference number: 4 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRPFQGV*EDQLCR
Trigger: CCTGCAAAGCTGGTCTTCCCAGACTCCCTGGAAGGG...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp CCTTTCTGCGGCAGGACCTACACTCATCTGGCGCCCGAGGGCTTTGGTAAACGGAGGAATCTCTGCTGGTaGGCCCTGCAGCCCCTGGGG +
Preference number: 4 (lower is better)
Translates to: PFCGRTYTHLAPEGFGKRRNLCW*ALQPLG
Trigger: CCCCAGGGGCTGCAGGGCTCACCAGCAGAGATTCCT...CCGTTTACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCACCAAGTCCAGACCCTaGGGACGACGAAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPTKSRP*GRRRPR
Trigger: CCGAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGGT...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCAGGCAGCTCCACTGGTaGAAGGCCACTGACCAAGTC +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGRQLHW*KATDQV
Trigger: GACTTGGTCAGTGGCCTTTCACCAGTGGAGCTGCCT...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTGCAGGCTCCTGGCCTaGGCAGACCTTCTCAGAATG +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGCRLLA*ADLLRM
Trigger: CATTCTGAGAAGGTCTGCTCAGGCCAGGAGCCTGCA...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGAGGCAGAGGCTGGGGTaGTACAGCTATAAACCAAGG +
Preference number: 4 (lower is better)
Translates to: REKSKARALPWRTAPSPWRQRLG*YSYKPR
Trigger: CCTTGGTTTATAGCTGTATCACCCCAGCCTCTGCCT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGACCGACATGGCACTGCTaGAACACACAGAGTACACAG +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRPTWHC*NTQSTQ
Trigger: CTGTGTACTCTGTGTGTTTCAGCAGTGCCATGTCGG...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCAGCACCGCCGGGGACTaGATGACGGCGGCGGGGACT +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTSTAGD*MTAAGT
Trigger: AGTCCCCGCCGCCGTCATGCAGTCCCCGGCGGTGCT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGGTCCAGACATCATCTTaGCCCGTACCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRVQTSS*PVPPGA
Trigger: AGCACCAGGAGGTACGGGGCAAGATGATGTCTGGAC...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CCAGGACACCCATGGGAAGGGCTTGACGTCTCCACCACTGGGGGCAGGGGTGCTACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCA +
Preference number: 4 (lower is better)
Translates to: PGHPWEGLDVSTTGGRGATSSGL*LADLNA
Trigger: TGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGT...AGCACCCCTGCCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGGTGTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCTTGCCCCGTACCTCCTaGTGCTGGGGCACAGTCAGG +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPLPRTS*CWGTVR
Trigger: CCTGACTGTGCCCCAGCACCAGGAGGTACGGGGCAA...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGTCGCCCTTCAGGCTCTaGACGGGCGGACCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGSPFRL*TGGPSS
Trigger: AGAAGAGGGTCCGCCCGTCCAGAGCCTGAAGGGCGA...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTGCCGGGGCGAGGGCTTaGCTTTCACGGCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSAGARA*LSRPLW
Trigger: CCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGC...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGACTCTCACAGGCGGCTaGCAGCAGGAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGTLTGG*QQEGVT
Trigger: GGTGACTCCCTCCTGCTGCCAGCCGCCTGTGAGAGT...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCCAGCCGGGCCCGCTTTaGGGGGAACAGCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPQPGPL*GEQLVF
Trigger: GAAAACCAGCTGTTCCCCCCAAAGCGGGCCCGGCTG...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGATGGGCTGGTGTATCGTaGTCCTGGATGTACTGCAAG +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRWAGVS*SWMYCK
Trigger: CTTGCAGTACATCCAGGACCACGATACACCAGCCCA...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCAGGCTGGGGGCGGCCTaGGCTGGTGTATCGTGGTCC +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLRLGAA*AGVSWS
Trigger: GGACCACGATACACCAGCCCAGGCCGCCCCCAGCCT...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGGCCAGGGGCCAGCATaGAAGGGTCAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPGQGPA*KGQKRL
Trigger: CAGCCTCTTCTGACCCTTCCATGCTGGCCCCTGGCC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTATGCCCCACTGGCAGTaGGAGGCGGTGCAGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRAMPHWQ*EAVQAG
Trigger: CCCAGCCTGCACCGCCTCCCACTGCCAGTGGGGCAT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCGACCTGGGATGCTCAGGGCTTTTCTCAGATTCCAGGGAAGGGGGACGTCATCCAGGCCAAGGCCTCGTaGCCCAGATCCCTGCGAGGG +
Preference number: 4 (lower is better)
Translates to: ATWDAQGFSQIPGKGDVIQAKAS*PRSLRG
Trigger: CCCTCGCAGGGATCTGGGCCACGAGGCCTTGGCCTG...GATGACGTCCCCCTTCCCTGGAATCTGAGAAAAGCCCTGAGCATCCCAGGTCGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGCTGCAGAGGCAGCTGTaGACATGCTCCCACTGGGGC +
Preference number: 4 (lower is better)
Translates to: ESGTSSGENLPCPGGICELQRQL*TCSHWG
Trigger: GCCCCAGTGGGAGCATGTCCACAGCTGCCTCTGCAG...CTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp CGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCACAGTCCTGTGTGCCCCCTCGCTGGGTaGGCTGCATGCTGCCATGAG +
Preference number: 4 (lower is better)
Translates to: RSWKEAAWLPLNPRHSPVCPLAG*AACCHE
Trigger: CTCATGGCAGCATGCAGCCCACCCAGCGAGGGGGCA...CACAGGACTGTGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCACGCCCAGGTGGCCGCTaGACAATAAGGCCACAGGGC +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKARPGGR*TIRPQG
Trigger: GCCCTGTGGCCTTATTGTCCAGCGGCCACCTGGGCG...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGAACACAACGCCCAGGTaGCCGCTGGACAATAAGGCC +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGNTTPR*PLDNKA
Trigger: GGCCTTATTGTCCAGCGGCCACCTGGGCGTTGTGTT...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGTCGCAGCGCCAGGCCTaGCATAGAAGTCAGTGGTCA +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGSQRQA*HRSQWS
Trigger: TGACCACTGACTTCTATGCCAGGCCTGGCGCTGCGA...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCTGTGCTTGGCCGACTTaGACGCAGCCAGACGGGTCA +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPCAWPT*TQPDGS
Trigger: TGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACA...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCCTCGTCAAAGATGGTaGGCCGGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLPRQRW*AGARAW
Trigger: CCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGG...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp TACCAAGCCCCAGTGCGGAGCCACAAGTGGAGGACATCCTGTGACCCGAGAAGGGTGGAGGACATCCTGTaGCCCGAGAAGGGAGGCGAC +
Preference number: 4 (lower is better)
Translates to: YQAPVRSHKWRTSCDPRRVEDIL*PEKGGD
Trigger: GTCGCCTCCCTTCTCGGGTCACAGGATGTCCTCCAC...CCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp AGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCCCCCACCTCCCATGGGAAGGGCTTaGCGTCTCCACCACTGGGGG +
Preference number: 4 (lower is better)
Translates to: RPWMGSHYGECLLCEPPPPMGRA*RLHHWG
Trigger: CCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGG...AGGTGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCGAGAGTCCAGACCACTaGGGAGGTGGCGTCCACAGT +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARESPDH*GGGVHS
Trigger: ACTGTGGACGCCACCTCCTCAGTGGTCTGGACTCTC...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGAGCAGCTTCTGATGTCTaGGAAACAGGTGGGCAAGAA +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRAASDV*ETGGQE
Trigger: TTCTTGCCCACCTGTTTCTCAGACATCAGAAGCTGC...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GACCCACACTTTTTGAGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DPHFLSRDSPSALRDAKGVETAS*PGQRAP
Trigger: AGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCAC...CCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCTCAAAAAGTGTGGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp GACCAGGGCCTGCCCCACGGGGGTTCTGGGTTGACAGGACTAACCGAGGAGTGGACTATGGAGAATGCCTaGTGTGTGAGCCCCCACCTG +
Preference number: 4 (lower is better)
Translates to: DQGLPHGGSGLTGLTEEWTMENA*CVSPHL
Trigger: CAGGTGGGGGCTCACACAGCAGGCATTCTCCATAGT...CCACTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTGGGGCAGGCCCTGGTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp GGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACCAGGCACTGGGGGCAGGGGTaGTGGATCAATTCCTCAGCC +
Preference number: 4 (lower is better)
Translates to: GTSSGENLPCPGGICETRHWGQG*WINSSA
Trigger: GGCTGAGGAATTGATCCAGCACCCCTGCCCCCAGTG...CCTGGTCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp AGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCCCCCACCTTGTGAGACCAGGGCCTaGCCCACGGGGGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: RPWMGSHYGECLLCEPPPCETRA*PTGVLG
Trigger: ACCCAGAACCCCCGTGGGGCAGGCCCTGGTCTCACA...AGGTGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGCGTACCTCCTGGTGCTaGGGCACAGTCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLRTSWC*GTVRSR
Trigger: CCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACG...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTAGTCACCCAGGGGGATaGCCCCGCCGAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASHPGG*PRRGQD
Trigger: ATCCTGACCTCGGCGGGGCCATCCCCCTGGGTGACT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGGCTGGGGCTTGGGTTTaGGCTCAGCTCCCAGGTTCA +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGAGAWV*AQLPGS
Trigger: TGAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGC...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCGGGGGCGGCCTGGGCTaGTGTATCGTGGTCCTGGAT +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLGGGLG*CIVVLD
Trigger: ATCCAGGACCACGATACACCAGCCCAGGCCGCCCCC...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCCGCAGGCTTCTACTTTaGCCCCACAGCCCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARRRLLL*PHSPGE
Trigger: TTCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCG...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGGCTGGGCTTCTGGTTaGCAAGGCATCCCCACACCC +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLGWASG*QGIPTP
Trigger: GGGTGTGGGGATGCCTTGCCAACCAGAAGCCCAGCC...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTGGCCCAAGAAGGCCATaGACTGGGCTGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPGPRRP*TGLAFP
Trigger: AGGAAAGGCCAGCCCAGTCCATGGCCTTCTTGGGCC...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTAGAATCATGCCCCACTaGCAGTGGGAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAARIMPH*QWEAVQ
Trigger: CTGCACCGCCTCCCACTGCCAGTGGGGCATGATTCT...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GTGACCCGAGAAGGGAGGCGACACCTAAGCCCAGTCCCAGAGACATGCACACCACTCACCCCTGGACGCTaGTCTCATGGCCACCCTGCA +
Preference number: 4 (lower is better)
Translates to: VTREGRRHLSPVPETCTPLTPGR*SHGHPA
Trigger: TGCAGGGTGGCCATGAGACCAGCGTCCAGGGGTGAG...TGGTGTGCATGTCTCTGGGACTGGGCTTAGGTGTCGCCTCCCTTCTCGGGTCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCCTGGTTGCATGGAAATaGTGGCCGCTCCAGGAGAGC +
Preference number: 4 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSLVAWK*WPLQES
Trigger: GCTCTCCTGGAGCGGCCACCATTTCCATGCAACCAG...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TGGGAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGCCCCACGGGGGTTCTaGGTTGACAGGACTAACCGA +
Preference number: 4 (lower is better)
Translates to: WESGTSSGENLPCPGGICAPRGF*VDRTNR
Trigger: TCGGTTAGTCCTGTCAACCCAGAACCCCCGTGGGGC...ACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTCCCA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp AGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCACCACAGAGTGGGGAATGAGCCGGGCCCTTaGCTCTGTCCAGAACACTCT +
Preference number: 4 (lower is better)
Translates to: SRDSPSALRDAKGHHRVGNEPGP*LCPEHS
Trigger: AGAGTGTTCTGGACAGAGCCAAGGGCCCGGCTCATT...CCCCACTCTGTGGTGCCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGAGCCCTGCAGCCCCTaGGGATCTGGTACCAAGAAC +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPEPCSP*GSGTKN
Trigger: GTTCTTGGTACCAGATCCCCAGGGGCTGCAGGGCTC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTAAGGGGGAAGGCAAATaGGTGGAGCCGGTGCTGGAG +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAKGEGK*VEPVLE
Trigger: CTCCAGCACCGGCTCCACCCATTTGCCTTCCCCCTT...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTAGCCCAGAGGAGAGCTaGAGCCACCTCTCGGAGGAA +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAASPEES*SHLSEE
Trigger: TTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCT...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCGGAGGAAGGGAGCAGTaGGACCCCAGCCATAGACAG +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARGGREQ*DPSHRQ
Trigger: CTGTCTATGGCTGGGGTCCCACTGCTCCCTTCCTCC...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCCCAGTGTGGGCATTCTaGAGTCGCCTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASPVWAF*SRLEVT
Trigger: CGTCACCTCCAGGCGACTTCAGAATGCCCACACTGG...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTCATCATTCCCTGTCTaGCTGTCTGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGSSFPV*LSVPSR
Trigger: CCTGGATGGCACAGACAGTCAGACAGGGAATGATGA...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp ATGAGGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCAGGGGGTCCACGGATaGCACGTCCTCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: MRGTDDSLQGLHALVSHKQGVHG*HVLRGV
Trigger: GACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTG...CTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCCTCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCCTCGGGGCAGAAGCCTaGGAGAATCATGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASLGAEA*ENHAPL
Trigger: CAGTGGGGCATGATTCTCTCAGGCTTCTGCCCCGAG...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCCTGGTGAAAGGCCACTaGCCAAGTCCAGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARLVKGH*PSPDPE
Trigger: CTCAGGGTCTGGACTTGGTCAGTGGCCTTTCACCAG...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CTGCGCCCTCAGAGGGTCCTTCTTTGCCTCTTCCAGTTCCTGGCGTTCCCCCGCCTAGATGGTCCCACCTaGACAGTTCCTTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: LRPQRVLLCLFQFLAFPRLDGPT*TVPWRR
Trigger: ACGCCTCCAAGGAACTGTTCAGGTGGGACCATCTAG...GCGGGGGAACGCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTGAGGGCGCAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR TCA 90 bp AGGCAGATCACCCAGCCAAGTGCTCAGACAGTCCCTGATGAAGTGGAGAGGCCACAGAAGCCGTCACGGTaGCTCAGGCTTGGCGGGCAC +
Preference number: 4 (lower is better)
Translates to: RQITQPSAQTVPDEVERPQKPSR*LRLGGH
Trigger: GTGCCCGCCAAGCCTGAGTCACCGTGACGGCTTCTG...TGGCCTCTCCACTTCATCAGGGACTGTCTGAGCACTTGGCTGGGTGATCTGCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGAGCTGGAGAGGGACGTaGTCAGATGCAGGACAGAGC +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKSWRGT*SDAGQS
Trigger: GCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGCT...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCAGGCGTCCACAGTGGATaGATACACAACGGGCAGGCC +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKAGVHSG*IHNGQA
Trigger: GGCCTGCCCGTTGTGTATTCATCCACTGTGGACGCC...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCACTGCATCTAAGAACCTaGGCCCTGAAGGCCAGGGCG +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKALHLRT*ALKARA
Trigger: CGCCCTGGCCTTCAGGGCTCAGGTTCTTAGATGCAG...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCCTCCACATCAGCCTaGCACCGGGTATTAAATCAC +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGPSTSA*HRVLNH
Trigger: GTGATTTAATACCCGGTGTCAGGCTGATGTGGAGGG...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCCTTGGCACTGTGGGGTaGGGGGATATCACACAGCCA +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPLGTVG*GDITQP
Trigger: TGGCTGTGTGATATCCCCTCACCCCACAGTGCCAAG...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCA +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARTSSGL*LADLNA
Trigger: TGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGT...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CCTTTCTGCGGCAGGACCTACACTCATCTGGCGCCCGAGGGCTTTGGTAAACGGGGGCGGACCCTCTTCTaGCACTTGGTCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: PFCGRTYTHLAPEGFGKRGRTLF*HLVLLL
Trigger: GAGGAGCAAGACCAAGTGGCAGAAGAGGGTCCGCCC...CCGTTTACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTTCCATGGCTTGGATCTaGTCCTGCGGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPSMAWI*SCGFCC
Trigger: GCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGA...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCACGGCCCCACATGTCTTaGTTCATCCTTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKARPHMS*FILGAG
Trigger: CCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGACAGTTTGCTGAGAGCTaGAATGACGAACATTGGCTC +
Preference number: 4 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRQFAES*NDEHWL
Trigger: GAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTG...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCAGCCTGAGAGAATCATaGCCCACTGGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARSLRES*PTGSGR
Trigger: CCTCCCACTGCCAGTGGGGCATGATTCTCTCAGGCT...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CCACCCTCCCATAACCCTCCCCACGAAGAAGGCCTTTCCAGAGTGGGCTGTGATGACAGGCCCGCAGCCTaGACTACTGAGCTGTCACGG +
Preference number: 4 (lower is better)
Translates to: PPSHNPPHEEGLSRVGCDDRPAA*TTELSR
Trigger: CCGTGACAGCTCAGTAGTGCAGGCTGCGGGCCTGTC...ATCACAGCCCACTCTGGAAAGGCCTTCTTCGTGGGGAGGGTTATGGGAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCGCAGGGCACTTGCTGTaGCCAGGTGCCGCAGGACCC +
Preference number: 4 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPAGHLL*PGAAGP
Trigger: GGGTCCTGCGGCACCTGGGCACAGCAAGTGCCCTGC...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTCGACTGCAGGGCACTTaGTGTGCCCAGGTGCCGCAG +
Preference number: 4 (lower is better)
Translates to: PHPYQNKAQERPAALGQARLQGT*CAQVPQ
Trigger: CTGCGGCACCTGGGCACAGCAAGTGCCCTGCAGTCG...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp TACCAAGCCCCAGTGCGGAGCCACAAGTGGAGGACATCCTGTGACCCGAGAAGGCCTGGCTCTGCCATCTaGAGGCTGCAGGAACGTGGA +
Preference number: 4 (lower is better)
Translates to: YQAPVRSHKWRTSCDPRRPGSAI*RLQERG
Trigger: TCCACGTTCCTGCAGCCTGCAGATGGCAGAGCCAGG...CCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACCCTCCCAGCAGCCCTaGCGTGGAGCAGCCCTTCAG +
Preference number: 4 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVPSQQP*RGAALQ
Trigger: CTGAAGGGCTGCTCCACGGCAGGGCTGCTGGGAGGG...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CCTTTCTGCGGCAGGACCTACACTCATCTGGCGCCCGAGGGCTTTGGTAAACGGCTGCGGTTGCATGGATaGTGCTGGGACGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: PFCGRTYTHLAPEGFGKRLRLHG*CWDGVR
Trigger: TCTGACCCCGTCCCAGCAGCATCCATGCAACCGCAG...CCGTTTACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp GAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGGCAGTGGTGAGAACCTaGCTTGTCCTGGGGGCATCT +
Preference number: 4 (lower is better)
Translates to: ESGTSSGENLPCPGGICEAVVRT*LVLGAS
Trigger: AGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGC...CTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp AGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCACCACAGAGTGGGGGCCTCTCACCCAATGTaGACCCACAGGCTTCTACTT +
Preference number: 4 (lower is better)
Translates to: SRDSPSALRDAKGHHRVGASHPM*THRLLL
Trigger: AAGTAGAAGCCTGTGGGTGCACATTGGGTGAGAGGC...CCCCACTCTGTGGTGCCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp AGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCACCACAGAGTGGGGATGAGAGTGAACAGATaGCAGGGGCCTTGGGGACAT +
Preference number: 4 (lower is better)
Translates to: SRDSPSALRDAKGHHRVGMRVNR*QGPWGH
Trigger: ATGTCCCCAAGGCCCCTGGCATCTGTTCACTCTCAT...CCCCACTCTGTGGTGCCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 20 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp TGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGCGCACTACGAGCCCTaGTTTTTGTGGCATTTCCCC +
Preference number: 4 (lower is better)
Translates to: WDTWTPRHARPGPAAPQAAHYEP*FLWHFP
Trigger: GGGGAAATGCCACAAAAAGCAGGGCTCGTAGTGCGC...TGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCACTTGCCCAGTGGCCTaGCACCTCCTGTTAGGAGCT +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPTCPVA*HLLLGA
Trigger: AGCTCCTAACAGGAGGTGGCAGGCCACTGGGCAAGT...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGGCCTGTTGATCACTTaGCCAGTGGCCTGCCACCTC +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLGLLIT*PVACHL
Trigger: GAGGTGGCAGGCCACTGGGCAAGTGATCAACAGGCC...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGCCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCCGTACCTCCTGGTGCTaGGGCACAGTCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GQEGHGWGHTMENACCVSRTSWC*GTVRSR
Trigger: CCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACG...GCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GGTGGGAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTCCAACTCGGCATCCTTaGAGACACAGCGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: GGSPAPAVVRTCLVLGASPTRHP*RHSAGS
Trigger: AGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGG...AGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTACTCTCACAGGCGGCTaGCAGCAGGAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRATLTGG*QQEGVT
Trigger: GGTGACTCCCTCCTGCTGCCAGCCGCCTGTGAGAGT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGGGGAATAAGACACATTaGGCTCTGGCTCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGGNKTH*ALAPRV
Trigger: CACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCC...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
61% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCGGGAATAAGACACATTaGGCTCTGGCTCCTAGGGTG +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGGNKTH*ALAPRV
Trigger: CACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCC...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CATCAAATAGCTTCAGGGGGTCCACGGATGACACGTCCTCCGAGGGGTCCTGTGGGCTGGGCTTCTGGTTaGCAAGGCATCCCCACACCC +
Preference number: 4 (lower is better)
Translates to: HQIASGGPRMTRPPRGPVGWASG*QGIPTP
Trigger: GGGTGTGGGGATGCCTTGCCAACCAGAAGCCCAGCC...CACAGGACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTGAAGCTATTTGATG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTGGAAGGAGGAAGAACTaGGGCCTAGCAGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSGRRKN*GLAGPS
Trigger: AGACGGCCCTGCTAGGCCCCAGTTCTTCCTCCTTCC...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTAAAGCCAGGCCGGCCTaGGCTCCGGCTTTGTGCTGG +
Preference number: 4 (lower is better)
Translates to: PHPYQNKAQERPAALGQAKARPA*APALCW
Trigger: CCAGCACAAAGCCGGAGCCCAGGCCGGCCTGGCTTT...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GGTGGGAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTTGGCCAGGAAGGCCATaGATGGGGTCACACTATGGA +
Preference number: 4 (lower is better)
Translates to: GGSPAPAVVRTCLVLGASWPGRP*MGSHYG
Trigger: TCCATAGTGTGACCCCATCCATGGCCTTCCTGGCCA...AGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTCCCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GGCCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCGGGCCAGGACACCCATaGGAAGGGCTTGACGTCTCC +
Preference number: 4 (lower is better)
Translates to: GQEGHGWGHTMENACCVSGPGHP*EGLDVS
Trigger: GGAGACGTCAAGCCCTTCCCATGGGTGTCCTGGCCC...GCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTACGGTGACTCAGGCTTaGCGGGCACTTGCAGGGCTG +
Preference number: 4 (lower is better)
Translates to: GVQMTASRACMPWCHISRTVTQA*RALAGL
Trigger: CAGCCCTGCAAGTGCCCGCCAAGCCTGAGTCACCGT...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGCAGCCCCTGGGGATCTaGTACCAAGAACTGGACGAC +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGQPLGI*YQELDD
Trigger: GTCGTCCAGTTCTTGGTACCAGATCCCCAGGGGCTG...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGGGAAGGCAAATGGGTaGAGCCGGTGCTGGAGCTGT +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLGKANG*SRCWSC
Trigger: ACAGCTCCAGCACCGGCTCCACCCATTTGCCTTCCC...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGGCCCCAGAGAGTGGCTaGACTTTGCTGTCTCGTCTG +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKAPESG*TLLSRL
Trigger: CAGACGAGACAGCAAAGTCCAGCCACTCTCTGGGGC...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGAAGCGCAGGATCTCATTaGACACGGCTCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: SPAPAVVRTCLVLGASVRSAGSH*TRLSSP
Trigger: GGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCT...TCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGAGTCCTCTTCAACTCTaGACAGTTCCTTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGSPLQL*TVPWRR
Trigger: ACGCCTCCAAGGAACTGTTCAGAGTTGAAGAGGACT...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCTGGAGAGGCAGGGCCTaGCTTCTCCCTTTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPWRGRA*LLPLEL
Trigger: AAGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCA...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCTCTGCTGCAGCTCCCTaGGCGCCGCGTACCCTTTCC +
Preference number: 4 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPSAAAP*APRTLS
Trigger: GGAAAGGGTACGCGGCGCTCAGGGAGCTGCAGCAGA...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGTATCAGAAAAGGGTCTaGGGTCCTAGTCCCACCCGC +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGYQKRV*GPSPTR
Trigger: GCGGGTGGGACTAGGACCTCAGACCCTTTTCTGATA...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTTGCTCCTATGTCACTTaGCCCAAAGCAGGTGGGGAG +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPCSYVT*PKAGGE
Trigger: CTCCCCACCTGCTTTGGGTCAAGTGACATAGGAGCA...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCCCCGTACCTCCTGGTaGTGGGGCACAGTCAGGTCG +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSPRTSW*WGTVRS
Trigger: CGACCTGACTGTGCCCCAGCACCAGGAGGTACGGGG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp GGCCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCCAGCTCTGGGCTGCCTaGCAACTCGGCATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: GQEGHGWGHTMENACCVSQLWAA*QLGILG
Trigger: TCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTG...GCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp CCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGGCCTAGCAGCTCTGGGCTaGCTGCCAACTCGGCATCCT +
Preference number: 4 (lower is better)
Translates to: PTWVSVKGRGGNPTSRYGLAALG*LPTRHP
Trigger: AGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAG...GCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCTGCTCCTGCGGCTTCTaGTGCCCAGCCACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLCSCGF*CPATAS
Trigger: TGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCA...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp ACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCACGGGGACCAGTCCCAGAGACATaGACACCACCAAGGGCACGC +
Preference number: 4 (lower is better)
Translates to: TWHSRETSSFTTEATARGPVPET*TPPRAR
Trigger: GCGTGCCCTTGGTGGTGTGCATGTCTCTGGGACTGG...TCCCCGTGCTGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGAAGCCGCAGCCACCTCTaGGAGTCCCACAGCTGGAAG +
Preference number: 4 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPRSRSHL*ESHSWK
Trigger: CTTCCAGCTGTGGGACTCGCAGAGGTGGCTGCGGCT...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTATGGGCTCCGGCTTTGTaGTGGCGACTCCCACCCTCC +
Preference number: 4 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVWAPAL*WRLPPS
Trigger: GGAGGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCA...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp TACCAAGCCCCAGTGCGGAGCCACAAGTGGAGGACATCCTGTGACCCGAGAAGGCGGTTGCATGGATGCTaGTGGGACGGGGTCAGAAGA +
Preference number: 4 (lower is better)
Translates to: YQAPVRSHKWRTSCDPRRRLHGC*WDGVRR
Trigger: TCTTCTGACCCCGTCCCAGCAGCATCCATGCAACCG...CCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CCTCCCCCTCAGCCCCCTTCACCGCCTCTCACCCAATGTGCACCCACAGGCTTCCACTGTACCACGTTCTaGAGAACACAGGTTGGGAAG +
Preference number: 4 (lower is better)
Translates to: PPPQPPSPPLTQCAPTGFHCTTF*RTQVGK
Trigger: CTTCCCAACCTGTGTTCTGCAGAACGTGGTACAGTG...GAAGCCTGTGGGTGCACATTGGGTGAGAGGCGGTGAAGGGGGCTGAGGGGGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCCCATTCAGAGGCGGCTaGTATGTGCTGAGTTGGCAG +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARPFRGG*YVLSWQ
Trigger: CTGCCAACTCAGCACATAGCAGCCGCCTCTGAATGG...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTCTGCTTGCTGCTGAATaGCACGTGCTCAGGACAGGT +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAALLAAE*HVLRTG
Trigger: ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAG...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGACAGGGGGCATGCCTTaGAGAATGGAATGGGCCTCT +
Preference number: 4 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGTGGMP*RMEWAS
Trigger: AGAGGCCCATTCCATTCTGCAAGGCATGCCCCCTGT...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCGTCACCACCAGGATCTaGTACTCCACGTGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARVTTRI*YSTCPD
Trigger: GTCTGGACACGTGGAGTACCAGATCCTGGTGGTGAC...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGGTCACCACCAGGATCTaGTACTCCACGTGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGVTTRI*YSTCPD
Trigger: GTCTGGACACGTGGAGTACCAGATCCTGGTGGTGAC...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACCAGGTTGGAGACCAAGAACTaGACGACATCCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: GTSSGENLPCPGGICETRLETKN*TTSSGL
Trigger: CAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAA...CCTGGTCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GTGCACAAACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTGTCGCCCTTCAGGCTCTaGACGGGCGGACCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: VHKQPPEKNRKSPTKGQVSPFRL*TGGPSS
Trigger: AGAAGAGGGTCCGCCCGTCCAGAGCCTGAAGGGCGA...CACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTTTGTGCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCAACTCTCACAGGCGGCTaGCAGCAGGAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: SHKPFLERGGLASSESQATLTGG*QQEGVT
Trigger: GGTGACTCCCTCCTGCTGCCAGCCGCCTGTGAGAGT...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCATCTCGTCCATGGCTTaGATCTGCTCCTGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPISSMA*ICSCGF
Trigger: GAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGAT...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCAAGAAGGCCATGGACTaGGCTGGCCTTTCCTGGGAA +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARKKAMD*AGLSWE
Trigger: TTCCCAGGAAAGGCCAGCCCAGTCCATGGCCTTCTT...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTAGAATCATGCCCCACTaGCAGTGGGAGGCGGTGCAG +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRARIMPH*QWEAVQ
Trigger: CTGCACCGCCTCCCACTGCCAGTGGGGCATGATTCT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CCACCCTCCCATAACCCTCCCCACGAAGAAGGCCTTTCCAGAGTGGGCTGTGATGTGCGGAGCCACAAGTaGAGGACATCCTGTGACCCG +
Preference number: 4 (lower is better)
Translates to: PPSHNPPHEEGLSRVGCDVRSHK*RTSCDP
Trigger: CGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCAC...ATCACAGCCCACTCTGGAAAGGCCTTCTTCGTGGGGAGGGTTATGGGAGGGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCATCAACAAGCCCACCTaGGTGTCTGTGAAAGGCCGA +
Preference number: 4 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSINKPT*VSVKGR
Trigger: TCGGCCTTTCACAGACACCCAGGTGGGCTTGTTGAT...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TACCAAGCCCCAGTGCGGAGCCACAAGTGGAGGACATCCTGTGACCCGAGAAGGCCACCAAAGGGCAGGTaGGTGGCACCAAGAGAGATC +
Preference number: 4 (lower is better)
Translates to: YQAPVRSHKWRTSCDPRRPPKGR*VAPREI
Trigger: GATCTCTCTTGGTGCCACCCACCTGCCCTTTGGTGG...CCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTATGGGGCAGGGCAAGCTaGGAAACGGGTGCCGCTGCA +
Preference number: 4 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVWGRAS*ETGAAA
Trigger: TGCAGCGGCACCCGTTTCCCAGCTTGCCCTGCCCCA...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCACGGGGACCGAGGCTGGTTGCATaGAAATGGTGGCCGCTCCAG +
Preference number: 4 (lower is better)
Translates to: TWHSRETSSFTTEATARGPRLVA*KWWPLQ
Trigger: CTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGG...TCCCCGTGCTGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGATCAGGGGGTTGTATGTaGTGCATGGTCAGTCGGGGG +
Preference number: 4 (lower is better)
Translates to: SPAPAVVRTCLVLGASVRSGGCM*CMVSRG
Trigger: CCCCCGACTGACCATGCACCACATACAACCCCCTGA...TCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GACCCACACTTTTTGAGCAGGGACTCCCCAAGCGCTCTGCGGGATGCTAAGGGGCGAGAGCCACCCCACTaGGACACATGGACTCCTAGA +
Preference number: 4 (lower is better)
Translates to: DPHFLSRDSPSALRDAKGREPPH*DTWTPR
Trigger: TCTAGGAGTCCATGTGTCCCAGTGGGGTGGCTCTCG...CCCCTTAGCATCCCGCAGAGCGCTTGGGGAGTCCCTGCTCAAAAAGTGTGGGTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGTCTGGTACCAAGAACTaGACGACATCCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGSGTKN*TTSSGL
Trigger: CAGGCCCGAGGATGTCGTCCAGTTCTTGGTACCAGA...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTGCTGGACTGGAACCCTaGCCGTTTGTGCCCACAGAA +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSAGLEP*PFVPTE
Trigger: TTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGC...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTGGCATAGAAGTCAGTaGTCAGCACTGGGGCTGGGG +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLWHRSQ*SALGLG
Trigger: CCCCAGCCCCAGTGCTGACCACTGACTTCTATGCCA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGAGCCACAGAGGAGGGTaGATATCTGTGTACCGCGTG +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGSHRGG*ISVYRV
Trigger: CACGCGGTACACAGATATCCACCCTCCTCTGTGGCT...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp ACCTCCTCGTCAAAGATGGTGAGCCGGGGCGAGGGCTaGGCTTTCACGGCCACTTTGGGATGTTTCTTGGGC +
Preference number: 4 (lower is better)
Translates to: TSSSKMVSRGEG*AFTATLGCFLG
Trigger: GCCCAAGAAACATCCCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGGAGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTCATCATTCCCTGTCTaGCTGTCTGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAASSFPV*LSVPSR
Trigger: CCTGGATGGCACAGACAGTCAGACAGGGAATGATGA...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GTACACAGCAAGGACTCAGGAAATAGGAGCTGTCACCGGCACAGGTTCTGCCAACCTCGTCAAAGATGGTaGGCCGGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: VHSKDSGNRSCHRHRFCQPRQRW*AGARAW
Trigger: CCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGG...TTGGCAGAACCTGTGCCGGTGACAGCTCCTATTTCCTGAGTCCTTGCTGTGTAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTCTCTGGCTCCTAGGGTaGGAGCCGCTCCCGCAGCCC +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCLWLLG*EPLPQP
Trigger: GGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAG...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGACTTCCCTGCCCCATGTaGCACCTCGCTACGGCCCCA +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGLPCPM*HLATAP
Trigger: TGGGGCCGTAGCGAGGTGTCACATGGGGCAGGGAAG...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTGGAGAGGCAGGGCCTaGCTTCTCCCTTTAGAGCTT +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLWRGRA*LLPLEL
Trigger: AAGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCGCCCAGGCCCCAGGCTaGGCTGTGGGGAAAGCTATG +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIAQAPG*AVGKAM
Trigger: CATAGCTTTCCCCACAGCTCAGCCTGGGGCCTGGGC...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTCTGGTGAAAGGCCACTaGCCAAGTCCAGACCCTGAG +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRALVKGH*PSPDPE
Trigger: CTCAGGGTCTGGACTTGGTCAGTGGCCTTTCACCAG...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GTGCACAAACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTGCCACCTGGGTGTCTGTaGAAGGCCGAGGTGGAAACC +
Preference number: 4 (lower is better)
Translates to: VHKQPPEKNRKSPTKGQVPPGCL*KAEVET
Trigger: GGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGG...CACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTTTGTGCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp AGTGACTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGCCTCTCCCGTCCCAAGGACGCTGTaGGTCCTCAGGGACCCAGGG +
Preference number: 4 (lower is better)
Translates to: SDYYRLVPISPTTLAASPVPRTL*VLRDPG
Trigger: CCCTGGGTCCCTGAGGACTCACAGCGTCCTTGGGAC...GGGAGAGGCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp TGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCACAATTGACCTCCATGTaGCAGCTGAGGCCTCATTCT +
Preference number: 4 (lower is better)
Translates to: WDTWTPRHARPGPAAPQAQLTSM*QLRPHS
Trigger: AGAATGAGGCCTCAGCTGTCACATGGAGGTCAATTG...TGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp TGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCATTTGAAGATAGCCTTTaGCCACCCCACTGTACCACG +
Preference number: 4 (lower is better)
Translates to: WDTWTPRHARPGPAAPQAFEDSL*PPHCTT
Trigger: CGTGGTACAGTGGGGTGGTCAAAGGCTATCTTCAAA...TGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGCCTCCCCACTCCTACTaGGACCTTCCGCTGCAGTCA +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQPPHSY*DLPLQS
Trigger: TGACTGCAGCGGAAGGTCTCAGTAGGAGTGGGGAGG...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGATCATTGATTGGCCATaGGTCGCAGTCCTGTGGGTG +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKIIDWP*VAVLWV
Trigger: CACCCACAGGACTGCGACTCATGGCCAATCAATGAT...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CATCAAATAGCTTCAGGGGGTCCACGGATGACACGTCCTCCGAGGGGTCCTGTGCCTTGTGTGAGAGCTTaGGACTCAGAGGAGCCCGTG +
Preference number: 4 (lower is better)
Translates to: HQIASGGPRMTRPPRGPVPCVRA*DSEEPV
Trigger: CACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGG...CACAGGACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTGAAGCTATTTGATG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTGCTCTGGGCAGCTGTaGACCCACATGAAGCCAATA +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAACSGQL*THMKPI
Trigger: TATTGGCTTCATGTGGGTTCACAGCTGCCCAGAGCA...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTTATCACCGGCTTAGCTaGCACTGGTGGCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSYHRLS*HWWLGL
Trigger: AAGCCCAAGCCACCAGTGGCAGCTAAGCCGGTGATA...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCTCCATGGCTTGGATCTaGTCCTGCGGCTTCTGCTGC +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLSMAWI*SCGFCC
Trigger: GCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGA...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTCAAAGCACTGTGTGGTaGCTAGACCTGTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPQSTVW*LDLCTS
Trigger: GCTGGTACACAGGTCTAGGCACCACACAGTGCTTTG...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CCACCCTCCCATAACCCTCCCCACGAAGAAGGCCTTTCCAGAGTGGGCTGTGATAAGCTGGGAAACGGGTaGCGCTGCATCTGCACAGGA +
Preference number: 4 (lower is better)
Translates to: PPSHNPPHEEGLSRVGCDKLGNG*RCICTG
Trigger: TCCTGTGCAGATGCAGCGGCACCCGTTTCCCAGCTT...ATCACAGCCCACTCTGGAAAGGCCTTCTTCGTGGGGAGGGTTATGGGAGGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGAGGGACGTGATCAGATaGAGGACAGAGCAGACAGGT +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKRDVIR*RTEQTG
Trigger: ACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCT...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCGCCACATTCTGTCCCTaGAGGAGGCCTCTCAGGCTC +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTATFCP*RRPLRL
Trigger: GAGCCTGAGAGGCCTCCTGCAGGGACAGAATGTGGC...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGTGCTGCTTCACAGGATaGTGTGGGCTGCATGAGAAC +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKCCFTG*CGLHEN
Trigger: GTTCTCATGCAGCCCACAGCATCCTGTGAAGCAGCA...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGCCACCCAGTTTATGGTaGTTTGCCAAGGCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGPPSLW*FAKAAP
Trigger: TGGAGCTGCCTTGGCAAAGCACCATAAACTGGGTGG...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTCTGCTGAATGCCACGTaGTCAGGACAGGTGGTAACT +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPLLNAT*SGQVVT
Trigger: AGTTACCACCTGTCCTGAGCACGTGGCATTCAGCAG...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGTACCTCCTGGTGCTaGGGCACAGTCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVRTSWC*GTVRSR
Trigger: CCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACG...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CCTTTCTGCGGCAGGACCTACACTCATCTGGCGCCCGAGGGCTTTGGTAAACGGGTCACCACCAGGATCTaGTACTCCACGTGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: PFCGRTYTHLAPEGFGKRVTTRI*YSTCPD
Trigger: GTCTGGACACGTGGAGTACCAGATCCTGGTGGTGAC...CCGTTTACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGAGTCACCACCAGGATCTaGTACTCCACGTGTCCAGAC +
Preference number: 4 (lower is better)
Translates to: SPAPAVVRTCLVLGASVRVTTRI*YSTCPD
Trigger: GTCTGGACACGTGGAGTACCAGATCCTGGTGGTGAC...TCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCTCCGAGGGGTCCTGTaGAGACAGCTTCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRILRGVL*RQLPAR
Trigger: CCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AAGTCTGAAGTTGAGGTGTCAGCAGGACCCTGCGCCCTCAGAGGGTCCTTCTTTACTCTCACAGGCGGCTaGCAGCAGGAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: KSEVEVSAGPCALRGSFFTLTGG*QQEGVT
Trigger: GGTGACTCCCTCCTGCTGCCAGCCGCCTGTGAGAGT...AAAGAAGGACCCTCTGAGGGCGCAGGGTCCTGCTGACACCTCAACTTCAGACTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR CCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCATCTCGTCCATGGCTTaGATCTGCTCCTGCGGCTTC +
Preference number: 4 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASISSMA*ICSCGF
Trigger: GAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGAT...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCATGTCCATCTCGTCCATaGCTTGGATCTGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKACPSRP*LGSAPA
Trigger: CGCAGGAGCAGATCCAAGCCATGGACGAGATGGACA...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTTGTCCATCTCGTCCATaGCTTGGATCTGCTCCTGCG +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSCPSRP*LGSAPA
Trigger: CGCAGGAGCAGATCCAAGCCATGGACGAGATGGACA...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGGCCAGGGGCCAGCATaGAAGGGTCAGAAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRGQGPA*KGQKRL
Trigger: CAGCCTCTTCTGACCCTTCCATGCTGGCCCCTGGCC...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCGGCCCAAGAAGGCCATaGACTGGGCTGGCCTTTCCT +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTGPRRP*TGLAFP
Trigger: AGGAAAGGCCAGCCCAGTCCATGGCCTTCTTGGGCC...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTGCAATGACGAACATTaGCTCTGTGCCCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLCNDEH*LCAQRP
Trigger: GGGCCTCTGGGCACAGAGCCAATGTTCGTCATTGCA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCGACCTGGGATGCTCAGGGCTTTTCTCAGATTCCAGGGAAGGGGGACGTCATCGGACCTACACTCATCTaGCGCCCGAGGGCTTTGGTA +
Preference number: 4 (lower is better)
Translates to: ATWDAQGFSQIPGKGDVIGPTLI*RPRALV
Trigger: TACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCC...GATGACGTCCCCCTTCCCTGGAATCTGAGAAAAGCCCTGAGCATCCCAGGTCGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TGTGTTCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTGGCCAGGGACCCAGGGCCTaGAGGGGGTCCCTGTGTGCA +
Preference number: 4 (lower is better)
Translates to: CVLQPKVGTDHQSPSRFGQGPRA*RGSLCA
Trigger: TGCACACAGGGACCCCCTCCAGGCCCTGGGTCCCTG...GCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAACACA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATGAGGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGGAACACTCTCAGAGCTaGCCAAGCGCCGCTGGGGAC +
Preference number: 4 (lower is better)
Translates to: MRGTDDSLQGLHALVSHKEHSQS*PSAAGD
Trigger: GTCCCCAGCGGCGCTTGGCCAGCTCTGAGAGTGTTC...CTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCCTCAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCAGGGCTCCCTCAGGGCTaGCTTTGGTGTCTATCAGAA +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKAGLPQG*LWCLSE
Trigger: TTCTGATAGACACCAAAGCCAGCCCTGAGGGAGCCC...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCCCATGACACAGGCCTaGCCAGGGAAGGCCCTAGGG +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIPMTQA*PGKALG
Trigger: CCCTAGGGCCTTCCCTGGCCAGGCCTGTGTCATGGG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCATGTGCCCACAGAACCTaGCTGCTGCTTCACAGGATG +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKACAHRT*LLLHRM
Trigger: CATCCTGTGAAGCAGCAGCCAGGTTCTGTGGGCACA...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAGTGTGGGCATTCTaGAGTCGCCTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVPVWAF*SRLEVT
Trigger: CGTCACCTCCAGGCGACTTCAGAATGCCCACACTGG...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACAGAACCCGTGGGCATaGAGCTTCCCTGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRQNPWA*SFPAPC
Trigger: ACATGGGGCAGGGAAGCTTCATGCCCACGGGTTCTG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCTGTGGGGAAAGCTATaGCCCAGTTTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSLWGKL*PSLLRA
Trigger: AGCTCTCAGCAAACTGGGTCATAGCTTTCCCCACAG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAACCAAGTCCAGACCCTaGGGACGACGAAGGCCTCGG +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGTKSRP*GRRRPR
Trigger: CCGAGGCCTTCGTCGTCCTCAGGGTCTGGACTTGGT...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCCACACAGAAGAGGCTaGTGCCAGTGCAGGCCTCCA +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSPHRRG*CQCRPP
Trigger: TGGAGGCCTGCACTGGCATCAGCCTCTTCTGTGTGG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCAGGGACAGGTGGTACCTaGACAGTTCCTTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: SHKPFLERGGLASSESQAGTGGT*TVPWRR
Trigger: ACGCCTCCAAGGAACTGTTCAGGTACCACCTGTCCC...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCACCTCCATGTGACAGCTaGGGCCTCATTCTCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SHKPFLERGGLASSESQAPPCDS*GLILPS
Trigger: GGAAGGGAGAATGAGGCCTCAGCTGTCACATGGAGG...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCAGGGCGGGTTTGCTaGCAGAGGCGCAGGGCCATC +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILPGRVC*QRRRAI
Trigger: GATGGCCCTGCGCCTCTGTCAGCAAACCCGCCCTGG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTGCGGCTGCTATGTGCTaGGTTGGCAGAGAAGCATCA +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRAAAAMC*VGREAS
Trigger: TGATGCTTCTCTGCCAACTCAGCACATAGCAGCCGC...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTTCCTTTAGTTGTGCCTaGGGTTCAGGCAGAAGGCCC +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASFSCA*GSGRRP
Trigger: GGGCCTTCTGCCTGAACCTCAGGCACAACTAAAGGA...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTAGAGAAGACACCGTGTaGAGACACAGACACAGAGGA +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPREDTV*RHRHRG
Trigger: TCCTCTGTGTCTGTGTCTTCACACGGTGTCTTCTCT...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCTCTGCTTGCTGCTaGATGCCACGTGCTCAGGAC +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRASACC*MPRAQD
Trigger: GTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGC...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTGTCCAGACATCATCTTaGCCCGTACCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRAVQTSS*PVPPGA
Trigger: AGCACCAGGAGGTACGGGGCAAGATGATGTCTGGAC...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACAGCTCTGGGCTGCCTaGCAACTCGGCATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRQLWAA*QLGILG
Trigger: TCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR GCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGVETAS*PGQRAP
Trigger: AGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCAC...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGCACTCCTTCTTACTATaGGAACAGAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGHSFLL*EQRQRR
Trigger: CCTCCTCTGCCTCTGTTCGCATAGTAAGAAGGAGTG...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGTGACTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGCCTCTCCCGGGTGCCGCTGCATCTaGACAGGAACCAAGCGCACG +
Preference number: 4 (lower is better)
Translates to: SDYYRLVPISPTTLAASPGCRCI*TGTKRT
Trigger: CGTGCGCTTGGTTCCTGTGCAGATGCAGCGGCACCC...GGGAGAGGCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CCTTTCTGCGGCAGGACCTACACTCATCTGGCGCCCGAGGGCTTTGGTAAACGGGTACGAAAAGGCACGTaGATTGTGCCTGCGGTTGCA +
Preference number: 4 (lower is better)
Translates to: PFCGRTYTHLAPEGFGKRVRKGT*IVPAVA
Trigger: TGCAACCGCAGGCACAATGCACGTGCCTTTTCGTAC...CCGTTTACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp ATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTAAGACATCTGCACTTTaGCCCCTCGCTGGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: MLGLALLLRRQTLVFHFPKTSAL*PLAGWA
Trigger: AGCCCACCCAGCGAGGGGGCAAAGTGCAGATGTCTT...AGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTACAGCCTCCAGGGCCTaGATGCCTTGGTGTCACATA +
Preference number: 4 (lower is better)
Translates to: GVQMTASRACMPWCHISRTASRA*MPWCHI
Trigger: TATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGT...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCTGCTCGGCCTGGCCCTaGTGCTCCGCAGGCAGACTC +
Preference number: 4 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALCSAWP*CSAGRL
Trigger: GAGTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCA...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTGCTCTGAACAGACAGTaGTGGTCCAGCCAGGGAAGG +
Preference number: 4 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGALNRQ*WSSQGR
Trigger: CCTTCCCTGGCTGGACCAGCACTGTCTGTTCAGAGC...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GTGACCCGAGAAGGGAGGCGACACCTAAGCCCAGTCCCAGAGACATGCACACCACAGCCCCTGGGGATCTaGTACCTAAGAACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: VTREGRRHLSPVPETCTPQPLGI*YLRTLA
Trigger: TGCTAGAGTTCTTAGGTACCAGATCCCCAGGGGCTG...TGGTGTGCATGTCTCTGGGACTGGGCTTAGGTGTCGCCTCCCTTCTCGGGTCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGATCGCCCTTCAGGCTCTaGACGGGCGGACCCTCTTCT +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGSPFRL*TGGPSS
Trigger: AGAAGAGGGTCCGCCCGTCCAGAGCCTGAAGGGCGA...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCGGCTTGGGCTTAAGCTaGGGCTTGGGTTTGGGCTCA +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTGLGLS*GLGLGS
Trigger: TGAGCCCAAACCCAAGCCCCAGCTTAAGCCCAAGCC...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGGGTGTATCGTGGTCCTaGATGTACTGCAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGGVSWS*MYCKMS
Trigger: GGACATCTTGCAGTACATCCAGGACCACGATACACC...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCAGCCCCGGAGAAAATaGAACCATGCAGTTCTGGGT +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSQPRRK*NHAVLG
Trigger: ACCCAGAACTGCATGGTTCCATTTTCTCCGGGGCTG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCTGCGAGTCCCACAGCTaGAAGGAGCACCCAGTCCTC +
Preference number: 4 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVCESHS*KEHPVL
Trigger: GAGGACTGGGTGCTCCTTCCAGCTGTGGGACTCGCA...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTTGTATGGCTGGTGAATaGCCCTGTGTGGAGGCAGGG +
Preference number: 4 (lower is better)
Translates to: PHPYQNKAQERPAALGQACMAGE*PCVEAG
Trigger: CCCTGCCTCCACACAGGGCCATTCACCAGCCATACA...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGGAGGACAGCACCCCTaGCCTGGTCTGATTCCACTG +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSGGQHP*PGLIPL
Trigger: CAGTGGAATCAGACCAGGCCAGGGGTGCTGTCCTCC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GTGACCCGAGAAGGGAGGCGACACCTAAGCCCAGTCCCAGAGACATGCACACCAGACCTGTGCCCACAGTaGATCCTGAAAGCAGTTTGG +
Preference number: 4 (lower is better)
Translates to: VTREGRRHLSPVPETCTPDLCPQ*ILKAVW
Trigger: CCAAACTGCTTTCAGGATCCACTGTGGGCACAGGTC...TGGTGTGCATGTCTCTGGGACTGGGCTTAGGTGTCGCCTCCCTTCTCGGGTCAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGAGGGAAGGACCGAGGCTaGTTGCATGGAAATGGTGGC +
Preference number: 4 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPRGKDRG*LHGNGG
Trigger: GCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCC...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAAGAGAGCCCCAGCAGATaGAGAGAGCGGTGGTGTTGG +
Preference number: 4 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKESPSR*RERWCW
Trigger: CCAACACCACCGCTCTCTCCATCTGCTGGGGCTCTC...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGGTGCAGCTATTGATCTaGAAGGACCTAGAACATGTA +
Preference number: 4 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRVQLLI*KDLEHV
Trigger: TACATGTTCTAGGTCCTTCCAGATCAATAGCTGCAC...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GGTGGGAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGGACTAACCGAGGAGTaGGGTAAAATTGTAGCCACT +
Preference number: 4 (lower is better)
Translates to: GGSPAPAVVRTCLVLGASGLTEE*GKIVAT
Trigger: AGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCC...AGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTCCCACC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GTACACAGCAAGGACTCAGGAAATAGGAGCTGTCACCGGCACAGGTTCTGCCAAACTTTGCCCCCTCGCTaGGTGGGCTGCATGCTGCCA +
Preference number: 4 (lower is better)
Translates to: VHSKDSGNRSCHRHRFCQTLPPR*VGCMLP
Trigger: TGGCAGCATGCAGCCCACCCAGCGAGGGGGCAAAGT...TTGGCAGAACCTGTGCCGGTGACAGCTCCTATTTCCTGAGTCCTTGCTGTGTAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCATCCTGGAGCATGGAGTaGGAGCTGGAGACACGCACA +
Preference number: 4 (lower is better)
Translates to: SHKPFLERGGLASSESQASWSME*ELETRT
Trigger: TGTGCGTGTCTCCAGCTCCCACTCCATGCTCCAGGA...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp ATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTTGGAAAGAGGCGGCCTaGCTTCCTCTGAATCCCAGG +
Preference number: 4 (lower is better)
Translates to: MLGLALLLRRQTLVFHFPWKEAA*LPLNPR
Trigger: CCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCA...AGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTGAGCACCAGCCCCTGTaGCCACCTACCCCGCTGTGC +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILEHQPL*PPTPLC
Trigger: GCACAGCGGGGTAGGTGGCCACAGGGGCTGGTGCTC...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCAAGGTGGCGTCCACAGTaGATGAATACACAACGGGCA +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKARWRPQ*MNTQRA
Trigger: TGCCCGTTGTGTATTCATCCACTGTGGACGCCACCT...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTTGGCTGTGCAGTTACTaGCCCGATGACCACACTGGG +
Preference number: 4 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGWLCSY*PDDHTG
Trigger: CCCAGTGTGGTCATCGGGCCAGTAACTGCACAGCCA...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGGGGACTTTCCAGAACTaGCCTGAGTTCCCGGCTTCC +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQGTFQN*PEFPAS
Trigger: GGAAGCCGGGAACTCAGGCCAGTTCTGGAAAGTCCC...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTTCCTCCACCGGCCCCTaGATCTGCTTCCCCACCGGC +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILSSTGP*ICFPTG
Trigger: GCCGGTGGGGAAGCAGATCCAGGGGCCGGTGGAGGA...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CATCAAATAGCTTCAGGGGGTCCACGGATGACACGTCCTCCGAGGGGTCCTGTGTCCCAGGACCCAGGGTaGGTAAGTCTCTTCACTTGG +
Preference number: 4 (lower is better)
Translates to: HQIASGGPRMTRPPRGPVSQDPG*VSLFTW
Trigger: CCAAGTGAAGAGACTTACCCACCCTGGGTCCTGGGA...CACAGGACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTGAAGCTATTTGATG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCATATCTGTGTACCGCGTaGGATTCTGTGTGTCGCAGC +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKAYLCTA*DSVCRS
Trigger: GCTGCGACACACAGAATCCCACGCGGTACACAGATA...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTACAAACTGTCCATGCTaGCAGGTGGCAGAGGGGGAA +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRATNCPC*QVAEGE
Trigger: TTCCCCCTCTGCCACCTGCCAGCATGGACAGTTTGT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGCTGAACAGACAGTGCTaGTCCAGCCAGGGAAGGCCT +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQLNRQC*SSQGRP
Trigger: AGGCCTTCCCTGGCTGGACCAGCACTGTCTGTTCAG...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCCCAATTTAGGGTCCTaGAACCAACCTAGGTGTAAA +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGPNLGS*NQPRCK
Trigger: TTTACACCTAGGTTGGTTCCAGGACCCTAAATTGGG...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp GCAGAGTACGAAAAGGCACGTGCATTGTGCCTGCGGTaGCATGGATGCTGCTGGGACGGGGTCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: AEYEKARALCLR*HGCCWDGVRRE
Trigger: CTCTCTTCTGACCCCGTCCCAGCAGCATCCATGCAACCGCAGGCACAATGCACGTGCCTTTTCGTACTCTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp ATGTGGTGCTGGCCCGCGCACTACGAGCCCTGCTTTTaGTGGCATTTCCCCAATTCATCAGCCACAGAGCCC +
Preference number: 4 (lower is better)
Translates to: MWCWPAHYEPCF*WHFPNSSATEP
Trigger: GGGCTCTGTGGCTGATGAATTGGGGAAATGCCACAAAAAGCAGGGCTCGTAGTGCGCGGGCCAGCACCACAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CAA 72 bp TTAGCTGCCACTGGTGGCTTGGGCTTAAGCTGGGGCTaGGGTTTGGGCTCAGCTCCCAGGTTCAGAATCTGG +
Preference number: 4 (lower is better)
Translates to: LAATGGLGLSWG*GLGSAPRFRIW
Trigger: CCAGATTCTGAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGCTTAAGCCCAAGCCACCAGTGGCAGCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp CTGGATGTACTGCAAGATGTCCATCTCGTCCATGGCTaGGATCTGCTCCTGCGGCTTCTGCTGCCCAGCCAC +
Preference number: 4 (lower is better)
Translates to: LDVLQDVHLVHG*DLLLRLLLPSH
Trigger: GTGGCTGGGCAGCAGAAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATGGACATCTTGCAGTACATCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp AGGGGGCATGCCTTGCAGAATGGAATGGGCCTCTGCTaGCTGCTGAATGCCACGTGCTCAGGACAGGTGGTA +
Preference number: 4 (lower is better)
Translates to: RGHALQNGMGLC*LLNATCSGQVV
Trigger: TACCACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGCCCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGACCAGTGTGGGCATTCTaGAGTCGCCTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGPVWAF*SRLEVT
Trigger: CGTCACCTCCAGGCGACTTCAGAATGCCCACACTGG...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAGCGCAGGATCTCATTaGACACGGCTCTCCTCTCCC +
Preference number: 4 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPSAGSH*TRLSSP
Trigger: GGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCT...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp CCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTCAGGGGGTCCACGGATaGCACGTCCTCCGAGGGGTC +
Preference number: 4 (lower is better)
Translates to: PTTPWIVTGQTQRMNVVPQGVHG*HVLRGV
Trigger: GACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTG...AGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGACTCGGGGCAGAAGCCTaGGAGAATCATGCCCCACTG +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGLGAEA*ENHAPL
Trigger: CAGTGGGGCATGATTCTCTCAGGCTTCTGCCCCGAG...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCCGCAGCCTGCACTACTaGGCTGTCACGGAGGACTCT +
Preference number: 4 (lower is better)
Translates to: GTHTALAKILLNSFLDFTRSLHY*AVTEDS
Trigger: AGAGTCCTCCGTGACAGCTCAGTAGTGCAGGCTGCG...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCGAGGCAGGGCCAAGGTaGATGCTCCTGCTATGCAGA +
Preference number: 4 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVEAGPR*MLLLCR
Trigger: TCTGCATAGCAGGAGCATTCACCTTGGCCCTGCCTC...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCGGCAGCTTCCCTGGCTaGGTCCATTGTTTTAAAGGA +
Preference number: 4 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASGSFPG*VHCFKG
Trigger: TCCTTTAAAACAATGGACTCAGCCAGGGAAGCTGCC...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCAAGGCCTTAGGGTGCTaGGCAGGGAATGGTTTGGAG +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTKALGC*AGNGLE
Trigger: CTCCAAACCATTCCCTGCTCAGCACCCTAAGGCCTT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTGGGCCGTAATCCAATaGCTGGTATTCTTTCCTATA +
Preference number: 4 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGWAVIQ*LVFFPI
Trigger: TATAGGAAAGAATACCAGTCATTGGATTACGGCCCA...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACCCCTCACATGGGAGTaGAACCGACATGGCACTGCT +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRPLTWE*NRHGTA
Trigger: AGCAGTGCCATGTCGGTTTCACTCCCATGTGAGGGG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCAGCTGCCTATGGCTCTaGACAGACAGTGCTGGTCCA +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTSCLWL*TDSAGP
Trigger: TGGACCAGCACTGTCTGTTCAGAGCCATAGGCAGCT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCTGCTGCATAACGACTaGTCAGTTTCTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGLLHND*SVSGKT
Trigger: AGTTTTACCAGAAACTGAGCAGTCGTTATGCAGCAG...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR GCA 90 bp GACCAGGGCCTGCCCCACGGGGGTTCTGGGTTGACAGGACTAACCGAGGAGTGGCTGCTGCATAACGACTaGTCAGTTTCTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: DQGLPHGGSGLTGLTEEWLLHND*SVSGKT
Trigger: AGTTTTACCAGAAACTGAGCAGTCGTTATGCAGCAG...CCACTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTGGGGCAGGCCCTGGTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp CCTTTCTGCGGCAGGACCTACACTCATCTGGCGCCCGAGGGCTTTGGTAAACGGCTGTCTGACTGTCTGTaGCATCCAGGACAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: PFCGRTYTHLAPEGFGKRLSDCL*HPGQRN
Trigger: ATTCCTCTGTCCTGGATGGCACAGACAGTCAGACAG...CCGTTTACCAAAGCCCTCGGGCGCCAGATGAGTGTAGGTCCTGCCGCAGAAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTTATCACCGGCTTAGCTaGCACTGGTGGCTTGGGCTT +
Preference number: 4 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGYHRLS*HWWLGL
Trigger: AAGCCCAAGCCACCAGTGGCAGCTAAGCCGGTGATA...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTTGGTCCTGGATGTACTaGAAGATGTCCATCTCGTCC +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSWSWMY*KMSISS
Trigger: GGACGAGATGGACATCTTGCAGTACATCCAGGACCA...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGCAGGAGAGAGAGACTTaGATCAGAACACTCCAGACA +
Preference number: 4 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGQERET*IRTLQT
Trigger: TGTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTG...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTCTCCCTTTAGAGCTTaGATCAAGAGGAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLSPFRA*IKRRLR
Trigger: CCTGAGCCTCCTCTTGATGCAAGCTCTAAAGGGAGA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGGAAACGGGTGCCGCTaGATCTGCACAGGAACCAAG +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSGNGCR*ICTGTK
Trigger: CTTGGTTCCTGTGCAGATGCAGCGGCACCCGTTTCC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTAGGACCGAGGCTGGTTaGATGGAAATGGTGGCCGCT +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSRTEAG*MEMVAA
Trigger: AGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCT...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCATTGTGCCTGCGGTTaGATGGATGCTGCTGGGACG +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSHCACG*MDAAGT
Trigger: CGTCCCAGCAGCATCCATGCAACCGCAGGCACAATG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCACTGAGACCTTCCGCTaGAGTCAGCAAGGGATGCAG +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTTETFR*SQQGMQ
Trigger: CTGCATCCCTTGCTGACTGCAGCGGAAGGTCTCAGT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGCAGGATGCTGTGGGCTaGATGAGAACTCAAGGGCCA +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQQDAVG*MRTQGP
Trigger: TGGCCCTTGAGTTCTCATGCAGCCCACAGCATCCTG...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTCAGCCCCTGGGGATCTaGTACCTAAGAACTCTAGCA +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRAQPLGI*YLRTLA
Trigger: TGCTAGAGTTCTTAGGTACCAGATCCCCAGGGGCTG...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCCCCAGGTTCAGAATCTaGTCCAAGTCCTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARPRFRI*SKSSST
Trigger: AGTTGAAGAGGACTTGGACCAGATTCTGAACCTGGG...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCAGGTGTATCGTGGTCCTaGATGTACTGCAAGATGTCC +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKAGVSWS*MYCKMS
Trigger: GGACATCTTGCAGTACATCCAGGACCACGATACACC...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCGAGGAGCAGAGGCCCTaGAGTAATTTGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTEEQRP*SNLAWG
Trigger: TCCCCAAGCCAAATTACTCCAGGGCCTCTGCTCCTC...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGGAGGAGCAGAGGCCCTaGAGTAATTTGGCTTGGGGA +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQEEQRP*SNLAWG
Trigger: TCCCCAAGCCAAATTACTCCAGGGCCTCTGCTCCTC...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTTCCAAAGCACTGTGTaGTGCCTAGACCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLFQSTV*CLDLCT
Trigger: GGTACACAGGTCTAGGCACCACACAGTGCTTTGGAA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAAGGCCTGCCGCGTTaGGCCAGGCTGATAAGGAGT +
Preference number: 4 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPKGLPR*ARLIRS
Trigger: ACTCCTTATCAGCCTGGCCCAACGCGGCAGGCCTTT...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GCCACGGCGGGGAAGGACCGAGGCTGGTTGCATGGAAATGGTGGCCGCTCCAGGAACAACCATAAAACGTaGCATTCCAGAGAAACATCC +
Preference number: 4 (lower is better)
Translates to: ATAGKDRGWLHGNGGRSRNNHKT*HSRETS
Trigger: GGATGTTTCTCTGGAATGCCACGTTTTATGGTTGTT...CCTGGAGCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTTCCCCGCCGTGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCACACATAAGCCGTTCCTaGAAAGAGGCGGCCTGGCTT +
Preference number: 4 (lower is better)
Translates to: SHKPFLERGGLASSESQAHISRS*KEAAWL
Trigger: AAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTG...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAAGAGCAGACAGGTCCTaGCACGGGCCAGGAGCTGAG +
Preference number: 4 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGRADRS*HGPGAE
Trigger: CTCAGCTCCTGGCCCGTGCCAGGACCTGTCTGCTCT...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCATCACTAACACAGGCTaGAATGGGTCACAGGCACAG +
Preference number: 4 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASITNTG*NGSQAQ
Trigger: CTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGAT...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTTTCTACATGGGTCTTaGCTGTGCAGTTACTGGCCC +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLFLHGS*LCSYWP
Trigger: GGGCCAGTAACTGCACAGCCAAGACCCATGTAGAAA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGATCAGCTGCAGGCTCCTaGCCTGAGCAGACCTTCTCA +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRSAAGS*PEQTFS
Trigger: TGAGAAGGTCTGCTCAGGCCAGGAGCCTGCAGCTGA...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAACAGCCAAGCTGGACTaGAACCCTGGCCGTTTGTGC +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRTAKLD*NPGRLC
Trigger: GCACAAACGGCCAGGGTTCCAGTCCAGCTTGGCTGT...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGTATAATGATGGCCCGTaGTGGGTGTCTACACACACA +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKYNDGP*WVSTHT
Trigger: TGTGTGTGTAGACACCCACCACGGGCCATCATTATA...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCAGCAGTAAAGGCAGTTaGCCTGCAGCTCCCATGCTC +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTSSKGS*PAAPML
Trigger: GAGCATGGGAGCTGCAGGCCAACTGCCTTTACTGCT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp GGAGTCTGGGAAGACCAGCTTTGCAGGCAGGTGCATTaGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCT +
Preference number: 4 (lower is better)
Translates to: GVWEDQLCRQVH*FIQEPACPKDA
Trigger: AGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCCAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp GGACTTTGCTGTCTCGTCTGTACCTTGTGTGAGAGCTaGAGACTCAGAGGAGCCCGTGGGGCACATGGAGGT +
Preference number: 4 (lower is better)
Translates to: GLCCLVCTLCES*RLRGARGAHGG
Trigger: ACCTCCATGTGCCCCACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGGTACAGACGAGACAGCAAAGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp CAGAGAGTGGCTGGACTTTGCTGTCTCGTCTGTACCTaGTGTGAGAGCTTGAGACTCAGAGGAGCCCGTGGG +
Preference number: 4 (lower is better)
Translates to: QRVAGLCCLVCT*CESLRLRGARG
Trigger: CCCACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGGTACAGACGAGACAGCAAAGTCCAGCCACTCTCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTCCTCGTCAAAGATGGTaGGCCGGGGCGAGGGCTTGG +
Preference number: 4 (lower is better)
Translates to: PTTPWIVTGQTQRMNVVPPRQRW*AGARAW
Trigger: CCAAGCCCTCGCCCCGGCTCACCATCTTTGACGAGG...AGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR TCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTCTGTGGGGAAAGCTATaGCCCAGTTTGCTGAGAGCT +
Preference number: 4 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGLWGKL*PSLLRA
Trigger: AGCTCTCAGCAAACTGGGTCATAGCTTTCCCCACAG...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTTCCACAAGGACGCTGTaGAGGTGCTCCTATTTGGAA +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASTRTL*RCSYLE
Trigger: TTCCAAATAGGAGCACCTTCACAGCGTCCTTGTGGA...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCA +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGTSSGL*LADLNA
Trigger: TGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGT...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCGGGCGGACCCTCTTCTaGCACTTGGTCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPGRTLF*HLVLLL
Trigger: GAGGAGCAAGACCAAGTGGCAGAAGAGGGTCCGCCC...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCVETAS*PGQRAP
Trigger: AGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCAC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCACAGGAGAGAGAGACTTaGATCAGAACACTCCAGACA +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKAQERET*IRTLQT
Trigger: TGTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTG...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGTACCCTTTCCCAGTaGAAATCCTCACCCCTGGAC +
Preference number: 4 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVRTLSQ*KSSPLD
Trigger: GTCCAGGGGTGAGGATTTGCACTGGGAAAGGGTACG...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTAAGGCACGTGCATTGTaGCTGCGGTTGCATGGATGC +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSKARAL*LRLHGC
Trigger: GCATCCATGCAACCGCAGGCACAATGCACGTGCCTT...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCCCCGCTCAATGCTTCTaGCAGGCAGGACAGGGCCAA +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPPAQCF*QAGQGQ
Trigger: TTGGCCCTGTCCTGCCTGGCAGAAGCATTGAGCGGG...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAACAGAACCTGGCTGCTaGTTCACAGGATGCTGTGGG +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRTEPGC*FTGCCG
Trigger: CCCACAGCATCCTGTGAAGCAGCAGCCAGGTTCTGT...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGCTTCCTGCCCGGGCCAAAGAGCCCCTCATCAGGGTCCACCTCCTCGTCAAAGCAGCTCTCCAGTTTGTaGCACATGTTATCTAAGGAG +
Preference number: 4 (lower is better)
Translates to: SFLPGPKSPSSGSTSSSKQLSSL*HMLSKE
Trigger: CTCCTTAGATAACATGTGGCACAAACTGGAGAGCTG...CTTTGACGAGGAGGTGGACCCTGATGAGGGGCTCTTTGGCCCGGGCAGGAAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGTTCTCTTTAGGTATATaGCTAGGAGTGGAATTGCTG +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGFSLGI*LGVELL
Trigger: CAGCAATTCCACTCCTAGGCATATACCTAAAGAGAA...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTCGTACCTCCTGGTGCTaGGGCACAGTCAGGTCGAGG +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCRTSWC*GTVRSR
Trigger: CCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACG...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGATTGGAGACCAAGAACTaGACGACATCCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRLETKN*TTSSGL
Trigger: CAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAA...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CCA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAATTGGAGACCAAGAACTaGACGACATCCTCGGGCCTG +
Preference number: 4 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKLETKN*TTSSGL
Trigger: CAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAA...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGTCTCGCTGTACTTTTTaGAGACCAAGAACTGGACGA +
Preference number: 4 (lower is better)
Translates to: ESGTSSGENLPCPGGICESRCTF*RPRTGR
Trigger: TCGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGA...CTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCTTTCACGGCCACTTTaGGATGTTTCTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSLSRPL*DVSWAS
Trigger: AGAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCACAGTCCTGTGCTTTCACGGCCACTTTaGGATGTTTCTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RSWKEAAWLPLNPRHSPVLSRPL*DVSWAS
Trigger: AGAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAG...CACAGGACTGTGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCCTCCCCTGGGGGTaGGGAGGTTCTGACCCTGCA +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSGLPWG*GGSDPA
Trigger: TGCAGGGTCAGAACCTCCCCACCCCCAGGGGAGGCC...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGATGGAGTAATTTGGCTTaGGGACGTCCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGWSNLA*GRPHPR
Trigger: CCTGGGGTGGGGACGTCCCCAAGCCAAATTACTCCA...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAGGAAGGAGGAAGAACTaGGGCCTAGCAGGGCCGTCT +
Preference number: 4 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGGRRKN*GLAGPS
Trigger: AGACGGCCCTGCTAGGCCCCAGTTCTTCCTCCTTCC...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCCCACACACACAGCTCTaGAACACACACGGCTCTGGC +
Preference number: 4 (lower is better)
Translates to: GTHTALAKILLNSFLDFTPHTQL*NTHGSG
Trigger: GCCAGAGCCGTGTGTGTTCCAGAGCTGTGTGTGTGG...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGAAAAACAGGGGCGACATaGAGCAGCAATCGGGACAGA +
Preference number: 4 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPRKTGAT*SSNRDR
Trigger: TCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTT...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCCCCCACCTCAGGAAGGCCATGGATaGGGTCACACTATGGAGAAT +
Preference number: 4 (lower is better)
Translates to: RPWMGSHYGECLLCEPPPQEGHG*GHTMEN
Trigger: ATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTG...AGGTGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp GGCCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCGAGATCCACAGTAGCTaGGAAGGAGTTAAGCAGACG +
Preference number: 4 (lower is better)
Translates to: GQEGHGWGHTMENACCVSEIHSS*EGVKQT
Trigger: CGTCTGCTTAACTCCTTCCCAGCTACTGTGGATCTC...GCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp CATCAAATAGCTTCAGGGGGTCCACGGATGACACGTCCTCCGAGGGGTCCTGTGCCTCAGGGCTGGCTTTaGTGTCTATCAGAAAAGGGT +
Preference number: 4 (lower is better)
Translates to: HQIASGGPRMTRPPRGPVPQGWL*CLSEKG
Trigger: ACCCTTTTCTGATAGACACCAAAGCCAGCCCTGAGG...CACAGGACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTGAAGCTATTTGATG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTAGTACATCCTGTCCATaGGCTCACAACAGGCTTCGA +
Preference number: 4 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASTSCP*AHNRLR
Trigger: TCGAAGCCTGTTGTGAGCCCATGGACAGGATGTACT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTACATTGTATGGACGTaGTCATGGGACACCAGTACT +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAYIVWT*SWDTST
Trigger: AGTACTGGTGTCCCATGACCACGTCCATACAATGTA...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCAAACAAACGACATGATTaGCCAGTTGGCCTGGAGAGA +
Preference number: 4 (lower is better)
Translates to: RPHMSCFILGAGLLVGKANKRHD*PVGLER
Trigger: TCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTT...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp GGAGCCGCTCGGCTAAGTGTGTTCTTCAGCCAAAGGTaGGCACAGACCACCAAAGTCCATCTCGGTTTGGCA +
Preference number: 4 (lower is better)
Translates to: GAARLSVFFSQR*AQTTKVHLGLA
Trigger: TGCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAACACACTTAGCCGAGCGGCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCTCATCATTCCCTGTCTaGCTGTCTGTGCCATCCAGG +
Preference number: 4 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVSSFPV*LSVPSR
Trigger: CCTGGATGGCACAGACAGTCAGACAGGGAATGATGA...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTTGGGATGGGCCGAGGTaGGGGCTTTTTCTATCTTTA +
Preference number: 4 (lower is better)
Translates to: PHPYQNKAQERPAALGQAWDGPR*GLFLSL
Trigger: TAAAGATAGAAAAAGCCCTCACCTCGGCCCATCCCA...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCCTTTCTGGAACTAGCTaGGCAGCCCTGGGCTGCGGA +
Preference number: 4 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALLSGTS*AALGCG
Trigger: TCCGCAGCCCAGGGCTGCTCAGCTAGTTCCAGAAAG...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTAAGGGAGCTGACCCTCTaGGCCTGGGTTAAGACGGAG +
Preference number: 4 (lower is better)
Translates to: SACGKTNDMIGQLAWRELRELTL*AWVKTE
Trigger: CTCCGTCTTAACCCAGGCTCAGAGGGTCAGCTCCCT...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAATCTGGGGGTCTTTGTaGTGGTGTCCAGAGAGTCCA +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRIWGSL*WCPESP
Trigger: TGGACTCTCTGGACACCATCACAAAGACCCCCAGAT...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCTCCTTGAGGAGGCTCTaGGCATTGACTATGTTTGCT +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLSLRRL*ALTMFA
Trigger: AGCAAACATAGTCAATGCTCAGAGCCTCCTCAAGGA...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGGGAAAACAAACGACATaGTTGGCCAGTTGGCCTGGA +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQGKQTT*LASWPG
Trigger: TCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCC...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCCTTAGTGTTTATGGATaGGCTCTGCATGTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARLSVYG*ALHVGK
Trigger: TTTTCCCACATGCAGAGCTCATCCATAAACACTAAG...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCCTGTCTGACTGTCTGTaGCATCCAGGACAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTLSDCL*HPGQRN
Trigger: ATTCCTCTGTCCTGGATGGCACAGACAGTCAGACAG...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGCTGTCTGACTGTCTGTaGCATCCAGGACAGAGGAAT +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQLSDCL*HPGQRN
Trigger: ATTCCTCTGTCCTGGATGGCACAGACAGTCAGACAG...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGGGCGGACCCTCTTCTaGCACTTGGTCTTGCTCCTC +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCGRTLF*HLVLLL
Trigger: GAGGAGCAAGACCAAGTGGCAGAAGAGGGTCCGCCC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTTGCTCCTGCGGCTTCTaGTGCCCAGCCACAGCTTCA +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILCSCGF*CPATAS
Trigger: TGAAGCTGTGGCTGGGCAGCAGAAGCCGCAGGAGCA...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTACGGCCCCACATGTCTTaGTTCATCCTTGGGGCTGGG +
Preference number: 4 (lower is better)
Translates to: SACGKTNDMIGQLAWRELRPHMS*FILGAG
Trigger: CCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CATCAAATAGCTTCAGGGGGTCCACGGATGACACGTCCTCCGAGGGGTCCTGTGCAGTTTGCTGAGAGCTaGAATGACGAACATTGGCTC +
Preference number: 4 (lower is better)
Translates to: HQIASGGPRMTRPPRGPVQFAES*NDEHWL
Trigger: GAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTG...CACAGGACCCCTCGGAGGACGTGTCATCCGTGGACCCCCTGAAGCTATTTGATG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAAGCCTGAGAGAATCATaGCCCACTGGCAGTGGGAGG +
Preference number: 4 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGSLRES*PTGSGR
Trigger: CCTCCCACTGCCAGTGGGGCATGATTCTCTCAGGCT...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATCAGGCCTGTTTCTGCTaGAGCTCCCTGAGCGCCGCG +
Preference number: 4 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHQACFC*SSLSAA
Trigger: CGCGGCGCTCAGGGAGCTGCAGCAGAAACAGGCCTG...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCTCCCTGGTGGTCTaGCATCAGCCTAGGCACAGA +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILPSLVV*HQPRHR
Trigger: TCTGTGCCTAGGCTGATGGCAGACCACCAGGGAGGG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTACTCTATGCCTCCTCTaGCTTGGTTGGCATAGTGAG +
Preference number: 4 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGTLCLL*LGWHSE
Trigger: CTCACTATGCCAACCAAGGCAGAGGAGGCATAGAGT...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTTGTACTGGGTCGAATTaGGTCCCTTCAAATTCATGT +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPCTGSN*VPSNSC
Trigger: ACATGAATTTGAAGGGACGCAATTCGACCCAGTACA...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTAATCCAGAAAAACATTaGCCTCTGGGACCTAGAGCA +
Preference number: 4 (lower is better)
Translates to: STVWCLDLCTSALGVGRSNPEKH*PLGPRA
Trigger: TGCTCTAGGTCCCAGAGGGCAATGTTTTTCTGGATT...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTGGGAAAGATTCTTTGTaGCCTTTTGCAGTCACTGTT +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAGKDSL*PFAVTV
Trigger: AACAGTGACTGCAAAAGGGCACAAAGAATCTTTCCC...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGTCTCGCTGTACTTTTTaGAGACCAAGAACTGGACGA +
Preference number: 4 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLSRCTF*RPRTGR
Trigger: TCGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGA...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CCA 90 bp ATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAAGCCGGGGCGAGGGCTTaGCTTTCACGGCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: MRKSNYSLDSHRADTKNEAGARA*LSRPLW
Trigger: CCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGC...TTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp ATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAAAGTCACCCAGGGGGATaGCCCCGCCGAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: MRKSNYSLDSHRADTKNESHPGG*PRRGQD
Trigger: ATCCTGACCTCGGCGGGGCCATCCCCCTGGGTGACT...TTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCCCAGGTTCAGAATCTaGTCCAAGTCCTCTTCAACT +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLPRFRI*SKSSST
Trigger: AGTTGAAGAGGACTTGGACCAGATTCTGAACCTGGG...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGTCTTGCTTCATCCTTaGGGCTGGGCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGVLLHP*GWASGW
Trigger: CCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGAC...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCGTCTTGCTTCATCCTTaGGGCTGGGCTTCTGGTTGG +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIVLLHP*GWASGW
Trigger: CCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGAC...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGATGCAATGACGAACATTaGCTCTGTGCCCAGAGGCCC +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGCNDEH*LCAQRP
Trigger: GGGCCTCTGGGCACAGAGCCAATGTTCGTCATTGCA...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCTTCCAAAGCACTGTGTaGTGCCTAGACCTGTGTACC +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTFQSTV*CLDLCT
Trigger: GGTACACAGGTCTAGGCACCACACAGTGCTTTGGAA...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCATCTCCAGAAAGCCTaGAATACACCAAAGGGGCCC +
Preference number: 4 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVHLQKA*NTPKGP
Trigger: GGGCCCCTTTGGTGTATTCCAGGCTTTCTGGAGATG...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCTCAGGGACCTTGCTCTaGGGCACGTATATAGGGGAA +
Preference number: 4 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPSGTLL*GTYIGE
Trigger: TTCCCCTATATACGTGCCCCAGAGCAAGGTCCCTGA...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TGGCTTACTGCGTACACAGCAAGGACTCAGGAAATAGGAGCTGTCACCGGCACAGGGGTCTTAGCCAGGTaGCGTCCCACACTTGATTTC +
Preference number: 4 (lower is better)
Translates to: WLTAYTARTQEIGAVTGTGVLAR*RPTLDF
Trigger: GAAATCAAGTGTGGGACGCCACCTGGCTAAGACCCC...TGTGCCGGTGACAGCTCCTATTTCCTGAGTCCTTGCTGTGTACGCAGTAAGCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTCTCTTTCTTTCTACATaGGTCTTGGCTGTGCAGTTA +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPLFLST*VLAVQL
Trigger: TAACTGCACAGCCAAGACCCATGTAGAAAGAAAGAG...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGGTATGGACGTGGTCATaGGACACCAGTACTCAACAG +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQVWTWS*DTSTQQ
Trigger: CTGTTGAGTACTGGTGTCCCATGACCACGTCCATAC...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCCCCAGATACATTGTATaGACGTGGTCATGGGACACC +
Preference number: 4 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTPRYIV*TWSWDT
Trigger: GGTGTCCCATGACCACGTCCATACAATGTATCTGGG...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACTTCACTTGGCACTGTaGGGTGAGGGGATATCACAC +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRLHLAL*GEGISH
Trigger: GTGTGATATCCCCTCACCCCACAGTGCCAAGTGAAG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTTGCTATGTGCTGAGTTaGCAGAGAAGCATCAGGCCT +
Preference number: 4 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGCYVLS*QRSIRP
Trigger: AGGCCTGATGCTTCTCTGCCAACTCAGCACATAGCA...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCGATGAGCTCTGCATGTaGGAAAACAAACGACATGAT +
Preference number: 4 (lower is better)
Translates to: NKTHWALAPRVRAAPAARDELCM*ENKRHD
Trigger: ATCATGTCGTTTGTTTTCCCACATGCAGAGCTCATC...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGACTAGAGGCTCAGCATaGCTCCTGGTAGAATTGGCT +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQTRGSA*LLVELA
Trigger: AGCCAATTCTACCAGGAGCCATGCTGAGCCTCTAGT...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGAATGATGGCCCGTGGTaGGTGTCTACACACACAACT +
Preference number: 4 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQNDGPW*VSTHTT
Trigger: AGTTGTGTGTGTAGACACCCACCACGGGCCATCATT...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCAACAGAAACACACTGTaGAGACGTCAAGGGCGATCT +
Preference number: 4 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLNRNTL*RRQGRS
Trigger: AGATCGCCCTTGACGTCTCCACAGTGTGTTTCTGTT...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCAAAAACATTGCCCTCTaGGACCTAGAGCACTTGTTA +
Preference number: 4 (lower is better)
Translates to: QTLRTTKASGQKPERIMPKNIAL*DLEHLL
Trigger: TAACAAGTGCTCTAGGTCCCAGAGGGCAATGTTTTT...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACACAGGGCTCCGTTTCTTaGCCTGTGCCCACAGTGGAT +
Preference number: 4 (lower is better)
Translates to: NHKTWHSRETSSFTTEATQGSVS*PVPTVD
Trigger: ATCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTG...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp GGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACCAGGCGGTCAACTTTCTTTTaGAAACTTCCCTTCTGTCTT +
Preference number: 4 (lower is better)
Translates to: GTSSGENLPCPGGICETRRSTFF*KLPFCL
Trigger: AAGACAGAAGGGAAGTTTTCAAAAGAAAGTTGACCG...CCTGGTCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp CGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCACAGTCCTGTGGTGGCGTCCCACACTTaGTTTCTTATAATATGGAGA +
Preference number: 4 (lower is better)
Translates to: RSWKEAAWLPLNPRHSPVVASHT*FLIIWR
Trigger: TCTCCATATTATAAGAAATCAAGTGTGGGACGCCAC...CACAGGACTGTGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGATTTCCAGAACTGGCCTaGGTTCCCGGCTTCCTAAGA +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGFPELA*VPGFLR
Trigger: TCTTAGGAAGCCGGGAACTCAGGCCAGTTCTGGAAA...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCCTCTCTGCAGCTTCTaGTGTCTGAGAAACAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIPLCSF*CLRNRW
Trigger: CCACCTGTTTCTCAGACATCAGAAGCTGCAGAGAGG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAGTCCAGACATCATCTTaGCCCGTACCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGVQTSS*PVPPGA
Trigger: AGCACCAGGAGGTACGGGGCAAGATGATGTCTGGAC...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACACTCCTTCTTACTATaGGAACAGAGGCAGAGGAGG +
Preference number: 4 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRHSFLL*EQRQRR
Trigger: CCTCCTCTGCCTCTGTTCGCATAGTAAGAAGGAGTG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATCTTGCTGTGCCCAGGTaGCGCAGGACCCCAGATCTC +
Preference number: 4 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHLAVPR*RRTPDL
Trigger: GAGATCTGGGGTCCTGCGGCACCTGGGCACAGCAAG...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAATAATCCTGGGGCCCTaGCCACCTCCCAGGCTGATA +
Preference number: 4 (lower is better)
Translates to: NHKTWHSRETSSFTTEATIILGP*PPPRLI
Trigger: TATCAGCCTGGGAGGTGGGCAGGGCCCCAGGATTAT...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CAAGCCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTATGGGAAGACCAGCTTTaGAGGCAGGTGCATTTGTTC +
Preference number: 4 (lower is better)
Translates to: QAHLGVCERPRWKPNFKVWEDQL*RQVHLF
Trigger: GAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCCA...TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGGCTTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGAGGAGCAATAGTGGTTaGATTTCCTTTAAAACTACT +
Preference number: 4 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGRSNSG*ISFKTT
Trigger: AGTAGTTTTAAAGGAAATGCAACCACTATTGCTCCT...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTTTTATGGATGAGCTCTaGATGTGGGAAAACAAACGA +
Preference number: 4 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAFMDEL*MWENKR
Trigger: TCGTTTGTTTTCCCACATGCAGAGCTCATCCATAAA...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCATGGCACAGGGGGCATaGCTTGCAGAATGGAATGGG +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPMAQGA*LAEWNG
Trigger: CCCATTCCATTCTGCAAGGCATGCCCCCTGTGCCAT...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTGAGGTAGATCCATATTaGAGCATGTATCACTCCATT +
Preference number: 4 (lower is better)
Translates to: REGTKPRGELEPPLGGRPEVDPY*SMYHSI
Trigger: AATGGAGTGATACATGCTGCAATATGGATCTACCTC...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GCGACCTGGGATGCTCAGGGCTTTTCTCAGATTCCAGGGAAGGGGGACGTCATCTCTCGCTGTACTTTTTaGAGACCAAGAACTGGACGA +
Preference number: 4 (lower is better)
Translates to: ATWDAQGFSQIPGKGDVISRCTF*RPRTGR
Trigger: TCGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGA...GATGACGTCCCCCTTCCCTGGAATCTGAGAAAAGCCCTGAGCATCCCAGGTCGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATCTCCGAGGGGTCCTGTaGAGACAGCTTCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: IMRKSNYSLDSHRADTKNLRGVL*RQLPAR
Trigger: CCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAG...ATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCACAGCCGGGCCCGCTTTaGGGGGAACAGCTGGTTTTC +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSQPGPL*GEQLVF
Trigger: GAAAACCAGCTGTTCCCCCCAAAGCGGGCCCGGCTG...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCTGGGCTGGTGTATCGTaGTCCTGGATGTACTGCAAG +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIWAGVS*SWMYCK
Trigger: CTTGCAGTACATCCAGGACCACGATACACCAGCCCA...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTTGGAGTAATTTGGCTTaGGGACGTCCCCACCCCAGG +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCWSNLA*GRPHPR
Trigger: CCTGGGGTGGGGACGTCCCCAAGCCAAATTACTCCA...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp CTACGTGTGGTTACTCAGAACAACAGAGAATGTGAGTTCAAACAAAGCCTCACCCCAGCAGCCCTGCCGTaGAGCAGCCCTTCAGCAGAG +
Preference number: 4 (lower is better)
Translates to: LRVVTQNNRECEFKQSLTPAALP*SSPSAE
Trigger: CTCTGCTGAAGGGCTGCTCCACGGCAGGGCTGCTGG...GGTGAGGCTTTGTTTGAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACTGTGAAAAGAAAGACTaGTTGTGCACACAAAGTTCT +
Preference number: 4 (lower is better)
Translates to: DTWTPRHARPGPAAPQADCEKKD*LCTQSS
Trigger: AGAACTTTGTGTGCACAACCAGTCTTTCTTTTCACA...GTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp CTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTGTGCCTCGGGAGCCCTGCTTTTTGTaGCATTTCCCCAATTCATCA +
Preference number: 4 (lower is better)
Translates to: LALLLRRQTLVFHFPVPREPCFL*HFPNSS
Trigger: TGATGAATTGGGGAAATGCCACAAAAAGCAGGGCTC...CCGAGGCACAGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAACTCTCCCCTCCCTGGTaGTCTGCCATCAGCCTAGGC +
Preference number: 4 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKLSPPW*SAISLG
Trigger: GCCTAGGCTGATGGCAGACCACCAGGGAGGGGAGAG...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGAGGCAGGACCACTATGTaGGGACATGCTGGTAGCTCT +
Preference number: 4 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGGRTTM*GHAGSS
Trigger: AGAGCTACCAGCATGTCCCCACATAGTGGTCCTGCC...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCATCACACAGCCAAGCTaGACTGGAACCCTGGCCGTT +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPITQPS*TGTLAV
Trigger: AACGGCCAGGGTTCCAGTCCAGCTTGGCTGTGTGAT...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAAGTCCTCTTCAACTCTaGACAGTTCCTTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGSPLQL*TVPWRR
Trigger: ACGCCTCCAAGGAACTGTTCAGAGTTGAAGAGGACT...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR TCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCACAGAACCCGTGGGCATaGAGCTTCCCTGCCCCATGT +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSQNPWA*SFPAPC
Trigger: ACATGGGGCAGGGAAGCTTCATGCCCACGGGTTCTG...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp AGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGCTGAGACTGGGCAATaGGCCGGGCCCTTGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RTFFIMRKSNYSLDSHRAAETGQ*AGPLAL
Trigger: CAGAGCCAAGGGCCCGGCTCATTGCCCAGTCTCAGC...TGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp ACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTAGATGTCTGCTAAAGTaGAGGTGGGGGTGCGGGACC +
Preference number: 4 (lower is better)
Translates to: TTPWIVTGQTQRMNVVPARCLLK*RWGCGT
Trigger: GGTCCCGCACCCCCACCTTCACTTTAGCAGACATCT...AGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTATGGCATAGTGAGGAGTaGCCAGAATCCTCCCCTTCC +
Preference number: 4 (lower is better)
Translates to: SACGKTNDMIGQLAWRELWHSEE*PESSPS
Trigger: GGAAGGGGAGGATTCTGGTCACTCCTCACTATGCCA...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAAACCTAGGTGTAAAATaGAGCCATCTGGGGATGGGG +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGNLGVK*SHLGMG
Trigger: CCCCATCCCCAGATGGCTTCATTTTACACCTAGGTT...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp TCTGGGTTGACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACCTAGCAGCTCTGGGCTaGCTGCCAACTCGGCATCCT +
Preference number: 4 (lower is better)
Translates to: SGLTGLTEEWGKIVATIYLAALG*LPTRHP
Trigger: AGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAG...GTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGTCAACCCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp ACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACGTGGAGACAGCTTCCTaGCCGGGCCAAAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: TFFIMRKSNYSLDSHRADVETAS*PGQRAP
Trigger: AGGGGCTCTTTGGCCCGGGCAGGAAGCTGTCTCCAC...GTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR GCA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCCCGTTTCTTGACCTGTaGCCACAGTGGATCCTGAAA +
Preference number: 4 (lower is better)
Translates to: GTHTALAKILLNSFLDFTPFLDL*PQWILK
Trigger: TTTCAGGATCCACTGTGGGCACAGGTCAAGAAACGG...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp ACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACTCCTTCTGTGAAAGCTaGCGACCGGGCCCTCCGGCA +
Preference number: 4 (lower is better)
Translates to: TFFIMRKSNYSLDSHRADSFCES*RPGPPA
Trigger: TGCCGGAGGGCCCGGTCGGCAGCTTTCACAGAAGGA...GTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp TGCCAGGGGCCTTGGGGACATGTAAATACCAGAAGCCGTCACGGTGACTCAGGCAATGAATGTGGTTCCTaGTCTCAAGAAGCTAATCCC +
Preference number: 4 (lower is better)
Translates to: CQGPWGHVNTRSRHGDSGNECGS*SQEANP
Trigger: GGGATTAGCTTCTTGAGAGCAGGAACCACATTCATT...GCCTGAGTCACCGTGACGGCTTCTGGTATTTACATGTCCCCAAGGCCCCTGGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp GGTATTAAATCACTGCACCAAGTATGTCAACACAACGCCCAGGTGGCCGCTGGACTCAACACTGATGGCTaGAAACCACCCGCACCATCA +
Preference number: 4 (lower is better)
Translates to: GIKSLHQVCQHNAQVAAGLNTDG*KPPAPS
Trigger: TGATGGTGCGGGTGGTTTGCAGCCATCAGTGTTGAG...TCCAGCGGCCACCTGGGCGTTGTGTTGACATACTTGGTGCAGTGATTTAATACC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCATGGGTCTTGGCTGTaGAGTTACTGGCCCGATGAC +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILHGSWL*SYWPDD
Trigger: GTCATCGGGCCAGTAACTGCACAGCCAAGACCCATG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTTCAGAATGGCCAAAGTaGCTGTCCTCAGGAGCCAGG +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCSEWPK*LSSGAR
Trigger: CCTGGCTCCTGAGGACAGGCACTTTGGCCATTCTGA...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGATTGCTTCCTCCAACTTaGCTGGAACAGGTACTGCAC +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGLLPPT*LEQVLH
Trigger: GTGCAGTACCTGTTCCAGGCAAGTTGGAGGAAGCAA...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGTAACAAACTGTCCATaGTGGCAGGTGGCAGAGGGG +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCVTNCP*WQVAEG
Trigger: CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTAC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGCCGGGGCGAGGGCTTaGCTTTCACGGCCACTTTGG +
Preference number: 4 (lower is better)
Translates to: RTFFIMRKSNYSLDSHRAAGARA*LSRPLW
Trigger: CCAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGC...TGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp AGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAAGTCACCCAGGGGGATaGCCCCGCCGAGGTCAGGAT +
Preference number: 4 (lower is better)
Translates to: RTFFIMRKSNYSLDSHRASHPGG*PRRGQD
Trigger: ATCCTGACCTCGGCGGGGCCATCCCCCTGGGTGACT...TGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAACGCAGGCTTCTACTTTaGCCCCACAGCCCCGGAGAA +
Preference number: 4 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKRRLLL*PHSPGE
Trigger: TTCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCG...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCCCTGGAGTAATTTaGCTTGGGGACGTCCCCACC +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSGPGVI*LGDVPT
Trigger: GGTGGGGACGTCCCCAAGCCAAATTACTCCAGGGCC...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTTCAGTATTCCTCTCCTaGGAGACCCACCCAGACCCT +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCSVFLS*ETHPDP
Trigger: AGGGTCTGGGTGGGTCTCCCAGGAGAGGAATACTGA...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CCA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCGTTTTGTATGAGTTCTaGGAACTTTTGCTTCAGTTT +
Preference number: 4 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSVLYEF*ELLLQF
Trigger: AAACTGAAGCAAAAGTTCCCAGAACTCATACAAAAC...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCAGGGCCTGCATGCCTTaGTGTCACATAAGCCGTTCC +
Preference number: 4 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALRACMP*CHISRS
Trigger: GGAACGGCTTATGTGACACCAAGGCATGCAGGCCCT...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCGTAAGTCTCTTCACTTaGCACTGTGGGGTGAGGGGA +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPVSLFT*HCGVRG
Trigger: TCCCCTCACCCCACAGTGCCAAGTGAAGAGACTTAC...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTATTGGCCAGTTGGCCTaGAGAGAGCTAGCCCAGCTT +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCIGQLA*RELAQL
Trigger: AAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAAT...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCGCATGCCTTGCAGAATaGAATGGGCCTCTGCTTGCT +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPACLAE*NGPLLA
Trigger: AGCAAGCAGAGGCCCATTCCATTCTGCAAGGCATGC...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp ACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACTGTGGTTGTCCAGTGTGGGCATTCTaGAGTCGCCTGGAGGTGACG +
Preference number: 4 (lower is better)
Translates to: TGLTEEWGKIVATIYCGCPVWAF*SRLEVT
Trigger: CGTCACCTCCAGGCGACTTCAGAATGCCCACACTGG...ACAACCACAGTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR TCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCTGACACATCTCCCCTaGCAATCTGCTAATGAAGTA +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSLTHLP*QSANEV
Trigger: TACTTCATTAGCAGATTGTCAGGGGAGATGTGTCAG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTCAAAGCACTGTGTGGTaGCTAGACCTGTGTACCAGC +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCQSTVW*LDLCTS
Trigger: GCTGGTACACAGGTCTAGGCACCACACAGTGCTTTG...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR GCA 90 bp AGTGACTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGCCTCTCCCAGCTTTGCAGGCAGGTaGATTTGTTCATACAGGAGC +
Preference number: 4 (lower is better)
Translates to: SDYYRLVPISPTTLAASPSFAGR*ICSYRS
Trigger: GCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCT...GGGAGAGGCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCTTTCACGGCCACTTTaGGATGTTTCTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRILSRPL*DVSWAS
Trigger: AGAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGTTTGGCACTACGTGTaGTTACTCAGAACAACAGAG +
Preference number: 4 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSVWHYV*LLRTTE
Trigger: CTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAAC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AGTGACTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGCCTCTCCCTGTGAAAGGCCGAGGTaGAAACCCAACTTCAAGGTA +
Preference number: 4 (lower is better)
Translates to: SDYYRLVPISPTTLAASPCERPR*KPNFKV
Trigger: TACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACA...GGGAGAGGCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGCTAGCTGAGCAGCCCTaGGCTGCGGATCCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHRLAEQP*AADPPP
Trigger: AGGGGGAGGATCCGCAGCCCAGGGCTGCTCAGCTAG...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCAAGCCACCCAGTTTATaGTGCTTTGCCAAGGCAGCT +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPKPPSL*CFAKAA
Trigger: AGCTGCCTTGGCAAAGCACCATAAACTGGGTGGCTT...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp GTGGGGCACATGGAGGTGAACTTAGTCCCAGATACATaGTATGGACGTGGTCATGGGACACCAGTACTCAAC +
Preference number: 4 (lower is better)
Translates to: VGHMEVNLVPDT*YGRGHGTPVLN
Trigger: GTTGAGTACTGGTGTCCCATGACCACGTCCATACAATGTATCTGGGACTAAGTTCACCTCCATGTGCCCCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GTGCACAAACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTGGGCCATGATGGTAGCTaGTTGCTAAATTTACATAAC +
Preference number: 4 (lower is better)
Translates to: VHKQPPEKNRKSPTKGQVGHDGS*LLNLHN
Trigger: GTTATGTAAATTTAGCAATCAGCTACCATCATGGCC...CACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTTTGTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATTACAGCCCATCGAGCTaGGAAACCAGCAGAGGAAGG +
Preference number: 4 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHYSPSS*ETSRGR
Trigger: CCTTCCTCTGCTGGTTTCTCAGCTCGATGGGCTGTA...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp AGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGGGACCCACACTTTTTaGGCAGGGACTCCCCAAGCG +
Preference number: 4 (lower is better)
Translates to: RTFFIMRKSNYSLDSHRAGTHTF*AGTPQA
Trigger: CGCTTGGGGAGTCCCTGCTCAAAAAGTGTGGGTCCC...TGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTGGAAGAAAACCAGCTTaGGAAGGCAGCAGTAAAGGC +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILGRKPA*EGSSKG
Trigger: GCCTTTACTGCTGCCTTCTCAAGCTGGTTTTCTTCC...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATCACGTGCATTGTGCCTaGGGTTGCATGGATGCTGCT +
Preference number: 4 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHHVHCA*GCMDAA
Trigger: AGCAGCATCCATGCAACCGCAGGCACAATGCACGTG...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATGAATGGCTATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGACTCCGAGGGGTCCTGTaGAGACAGCTTCCTGCCCGG +
Preference number: 4 (lower is better)
Translates to: MNGYQNILYYEEVQLLPGLRGVL*RQLPAR
Trigger: CCGGGCAGGAAGCTGTCTCCACAGGACCCCTCGGAG...TCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGATAGCCATTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CCA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCCTGCCTAATTTCTACTaGGCTCTAATTCCTTTCTGC +
Preference number: 4 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPLPNFY*ALIPFC
Trigger: GCAGAAAGGAATTAGAGCCCAGTAGAAATTAGGCAG...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACATCTTCAGCCAAAGGTTaGCACAGACCACCAAAGTCC +
Preference number: 4 (lower is better)
Translates to: NHKTWHSRETSSFTTEATSSAKG*HRPPKS
Trigger: GGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGA...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp AGTGACTATTACAGGCTTGTCCCCATATCACCCACTACTCTGGCTGCCTCTCCCGGACAGACCATAGGGTaGAAAAGCAGAGTACGAAAA +
Preference number: 4 (lower is better)
Translates to: SDYYRLVPISPTTLAASPGQTIG*KSRVRK
Trigger: TTTTCGTACTCTGCTTTTCCACCCTATGGTCTGTCC...GGGAGAGGCAGCCAGAGTAGTGGGTGATATGGGGACAAGCCTGTAATAGTCACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TCTTACAGATATAATGAGATCATGCAAGCAAATGCTAACTTAGTTCCCAGCATTACGGGGACCCGGGTGTaGGCTCCCCCTTCCAGGGAG +
Preference number: 4 (lower is better)
Translates to: SYRYNEIMQANANLVPSITGTRV*APPSRE
Trigger: CTCCCTGGAAGGGGGAGCCCACACCCGGGTCCCCGT...AATGCTGGGAACTAAGTTAGCATTTGCTTGCATGATCTCATTATATCTGTAAGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GGTTGTTTCTGTTCTAAGGACTTTGCATGTGTTAGCTCTGTAAATTCTCATAACTGGACATGCTCCCACTaGGGCACGGCAGCGGGGCCT +
Preference number: 4 (lower is better)
Translates to: GCFCSKDFACVSSVNSHNWTCSH*GTAAGP
Trigger: AGGCCCCGCTGCCGTGCCCCAGTGGGAGCATGTCCA...GTTATGAGAATTTACAGAGCTAACACATGCAAAGTCCTTAGAACAGAAACAACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CCA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAACACATGAAATTGCTTaGCTCTTCCCAGTAGCCAGA +
Preference number: 4 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGTHEIA*LFPVAR
Trigger: TCTGGCTACTGGGAAGAGCCAAGCAATTTCATGTGT...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp CGATCAGAGTTTGTAGTGAGTGGGACCATTCATAGCTaGATGCTGAGACTTCAGCTCCTTGAGGAGGCTCTG +
Preference number: 4 (lower is better)
Translates to: RSEFVVSGTIHS*MLRLQLLEEAL
Trigger: CAGAGCCTCCTCAAGGAGCTGAAGTCTCAGCATCAAGCTATGAATGGTCCCACTCACTACAAACTCTGATCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTCTCCCTCAGGGCCGCTaGCCCCACTCAGGGACAAGG +
Preference number: 4 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRILPQGR*PHSGTR
Trigger: CCTTGTCCCTGAGTGGGGTCAGCGGCCCTGAGGGAG...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp TTGCTTCAGTTTTATGGGATGTTTATACATGTGTGTCCTGGGTCATGGCGTACCGGGTCCCAGGATAGCTaGCACATCTCCCCTGACAAT +
Preference number: 4 (lower is better)
Translates to: LLQFYGMFIHVCPGSWRTGSQDS*HISPDN
Trigger: ATTGTCAGGGGAGATGTGTCAGCTATCCTGGGACCC...GGTACGCCATGACCCAGGACACACATGTATAAACATCCCATAAAACTGAAGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp ACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACGGGCCCAGGGATGAATaGGAACGTGAAGTGCCATGT +
Preference number: 4 (lower is better)
Translates to: TFFIMRKSNYSLDSHRADGPRDE*EREVPC
Trigger: ACATGGCACTTCACGTTCTCATTCATCCCTGGGCCC...GTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGGAGAGAAACTCATATaGAGACAAAGGCAGAGGCTG +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCGEKLI*RQRQRL
Trigger: CAGCCTCTGCCTTTGTCTTCATATGAGTTTCTCTCC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp ACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACTGTGGTTGTGTCCAGACATCATCTTaGCCCGTACCTCCTGGTGCT +
Preference number: 4 (lower is better)
Translates to: TGLTEEWGKIVATIYCGCVQTSS*PVPPGA
Trigger: AGCACCAGGAGGTACGGGGCAAGATGATGTCTGGAC...ACAACCACAGTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTCGTGGCCCAGATCCCTaGGAGGGGGCGACCTGGGAT +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCRGPDP*EGATWD
Trigger: ATCCCAGGTCGCCCCCTCGCAGGGATCTGGGCCACG...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp TCACATAAGCCGTTCCTGGAAAGAGGCGGCCTGGCTTCCTCTGAATCCCAGGCAATTTGTTCCCAAACTTaGTTATGCCAGTTATACCTG +
Preference number: 4 (lower is better)
Translates to: SHKPFLERGGLASSESQAICSQT*LCQLYL
Trigger: CAGGTATAACTGGCATAAGCAAGTTTGGGAACAAAT...TGCCTGGGATTCAGAGGAAGCCAGGCCGCCTCTTTCCAGGAACGGCTTATGTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp TTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACAAATGAGAACGTGAAGTaGCATGTGGTGCTGGCCCGC +
Preference number: 4 (lower is better)
Translates to: FFIMRKSNYSLDSHRADTNENVK*HVVLAR
Trigger: GCGGGCCAGCACCACATGGCACTTCACGTTCTCATT...TGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR GCA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTACAGTTTATGGTGCTTTaGCAAGGCAGCTCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: SACGKTNDMIGQLAWRELQFMVL*QGSSRK
Trigger: TTTCCTGGAGCTGCCTTGGCAAAGCACCATAAACTG...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAAATGGAATGGGCCTCTaGTTGCTGCTGAATGCCACG +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSNGMGL*LLLNAT
Trigger: CGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATT...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp ATGAATGGCTATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGAACTCTCACAGGCGGCTaGCAGCAGGAGGGAGTCACC +
Preference number: 4 (lower is better)
Translates to: MNGYQNILYYEEVQLLPGTLTGG*QQEGVT
Trigger: GGTGACTCCCTCCTGCTGCCAGCCGCCTGTGAGAGT...TCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGATAGCCATTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATACAGCACCCCTGGCCTaGTCTGATTCCACTGAAAGA +
Preference number: 4 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHTAPLA*SDSTER
Trigger: TCTTTCAGTGGAATCAGACCAGGCCAGGGGTGCTGT...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CTACGTGTGGTTACTCAGAACAACAGAGAATGTGAGTTCAAACAAAGCCTCACCCAGGCTGATAAAGACTaGACTGGAGATGGCGTGGGG +
Preference number: 4 (lower is better)
Translates to: LRVVTQNNRECEFKQSLTQADKD*TGDGVG
Trigger: CCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTG...GGTGAGGCTTTGTTTGAACTCACATTCTCTGTTGTTCTGAGTAACCACACGTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAAAGTCTGCTGAGAATGTaGCCAGTGGAGGTAAAGGCC +
Preference number: 4 (lower is better)
Translates to: MRKSNYSLDSHRADTKNESLLRM*PVEVKA
Trigger: GGCCTTTACCTCCACTGGCCACATTCTCAGCAGACT...TTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CAA 72 bp CAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTaGGCACTACGTGTGGTTACTCAGAACAACAGAGAA +
Preference number: 4 (lower is better)
Translates to: QRLAQTTKVHLG*ALRVVTQNNRE
Trigger: TTCTCTGTTGTTCTGAGTAACCACACGTAGTGCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp CTGGGTGGGCTGCATGCTGCCATGAGTCCGTTTAATTaGTTCCCAAACTTGCTTATGCCAGTTATACCTGCT +
Preference number: 4 (lower is better)
Translates to: LGGLHAAMSPFN*FPNLLMPVIPA
Trigger: AGCAGGTATAACTGGCATAAGCAAGTTTGGGAACAAATTAAACGGACTCATGGCAGCATGCAGCCCACCCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTTTGATAGAGAGAATTTaGCATGTCTGGCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCLIERI*HVWQQL
Trigger: CAGCTGCTGCCAGACATGTCAAATTCTCTCTATCAA...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGGATTTTATAGACTGTaGGGTCCCGATGCAAATCCT +
Preference number: 4 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCGFYRL*GPDANP
Trigger: AGGATTTGCATCGGGACCTCACAGTCTATAAAATCC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp TCACGTGGCCTTCTCTTCTCCACTGTGTGTCTCTTACAGAAACACCATAATGTAAGCCCTGAGCTTGTTTaGCTGCAACTAGATGGTCCC +
Preference number: 4 (lower is better)
Translates to: SRGLLFSTVCLLQKHHNVSPELV*LQLDGP
Trigger: GGGACCATCTAGTTGCAGGCAAACAAGCTCAGGGCT...TACATTATGGTGTTTCTGTAAGAGACACACAGTGGAGAAGAGAAGGCCACGTGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR GCA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCGGGTATTAAATCACTaGACCAAGTATGTCAACACA +
Preference number: 4 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIRVLNH*TKYVNT
Trigger: TGTGTTGACATACTTGGTGCAGTGATTTAATACCCG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCATGTCTGGCAGCAGCTaGAAAGGACAGAACTTTATA +
Preference number: 4 (lower is better)
Translates to: SVARKPPEARTKQSRILPMSGSS*KGQNFI
Trigger: TATAAAGTTCTGTCCTTTGCAGCTGCTGCCAGACAT...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTGCATTTCTATCACCCTaGGAAAGATTCTTTGTGCCC +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILAFLSP*ERFFVP
Trigger: GGGCACAAAGAATCTTTCCCAGGGTGATAGAAATGC...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCTAGTGGATTTCAGTTaGCAGAACTCTCTACTTCAG +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILLVDFS*QNSLLQ
Trigger: CTGAAGTAGAGAGTTCTGTCAACTGAAATCCACTAG...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR GCA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATGCTCTAATTCCTTTCTaGGGCAGGACCTACACTCAT +
Preference number: 4 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHALIPF*GRTYTH
Trigger: ATGAGTGTAGGTCCTGCCGCAGAAAGGAATTAGAGC...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCAATGAATGTGGTTCCTaGTCTCAAGAAGCTAATCCC +
Preference number: 4 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALNECGS*SQEANP
Trigger: GGGATTAGCTTCTTGAGAGCAGGAACCACATTCATT...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTGATGGCGTGGGGTCCTaGCTCTGCCATCTGCAGGCT +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCDGVGS*LCHLQA
Trigger: AGCCTGCAGATGGCAGAGCCAGGACCCCACGCCATC...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp TCTTACAGATATAATGAGATCATGCAAGCAAATGCTAACTTAGTTCCCAGCATTGTGCCTGCGGTTGCATaGATGCTGCTGGGACGGGGT +
Preference number: 4 (lower is better)
Translates to: SYRYNEIMQANANLVPSIVPAVA*MLLGRG
Trigger: ACCCCGTCCCAGCAGCATCCATGCAACCGCAGGCAC...AATGCTGGGAACTAAGTTAGCATTTGCTTGCATGATCTCATTATATCTGTAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp TGTGTTCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTGGCTTTGGCAGTAAGATGTaGATATTCAAAGGTGCATTC +
Preference number: 4 (lower is better)
Translates to: CVLQPKVGTDHQSPSRFGFGSKM*IFKGAF
Trigger: GAATGCACCTTTGAATATTCACATCTTACTGCCAAA...GCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAACACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR TCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCGAACATTCTTTATTATaGGGAAGTCCAACTACTCCC +
Preference number: 4 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALEHSLL*GSPTTP
Trigger: GGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTC...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR GCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTCAGCTCTGGGCTGCCTaGCAACTCGGCATCCTTGGA +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCQLWAA*QLGILG
Trigger: TCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTG...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTGTCTCATGGCCACCCTaGAGCCCACCCTCCCATAAC +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCVSWPP*SPPSHN
Trigger: GTTATGGGAGGGTGGGCTGCAGGGTGGCCATGAGAC...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp GGTTGTTTCTGTTCTAAGGACTTTGCATGTGTTAGCTCTGTAAATTCTCATAACGCTTTCCCGGGATACTaGAGGTCCCTAGGGCTGGTT +
Preference number: 4 (lower is better)
Translates to: GCFCSKDFACVSSVNSHNAFPGY*RSLGLV
Trigger: AACCAGCCCTAGGGACCTGCAGTATCCCGGGAAAGC...GTTATGAGAATTTACAGAGCTAACACATGCAAAGTCCTTAGAACAGAAACAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR GCA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCTATTTCATTTCCCTGTaGCTCGGTTTCCCTCTAATA +
Preference number: 4 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALYFISL*LGFPLI
Trigger: TATTAGAGGGAAACCGAGGCACAGGGAAATGAAATA...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTTGCGAGGGGGCGACCTaGGATGCTCAGGGCTTTTCT +
Preference number: 4 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRICEGAT*DAQGFS
Trigger: AGAAAAGCCCTGAGCATCCCAGGTCGCCCCCTCGCA...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTTATAAGAGGGAAATTTaGGCACAGACACAGAGAAGA +
Preference number: 4 (lower is better)
Translates to: PSVARKPPEARTKQSRILYKREI*AQTQRR
Trigger: TCTTCTCTGTGTCTGTGCCCAAATTTCCCTCTTATA...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCATGTCTGAGAAACAGGTaGGCAAGAAATCAGCTGTTC +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSCLRNR*ARNQLF
Trigger: GAACAGCTGATTTCTTGCCCACCTGTTTCTCAGACA...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTaGGCCTGGAGAGAGCTAGCCCAGCTTTATTTAAAA +
Preference number: 4 (lower is better)
Translates to: SACGKTNDMIGQ*AWRELAQLYLK
Trigger: TTTTAAATAAAGCTGGGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp ACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTTGTTACGGCTCTTTTTaGATTTGTCTGAACAGTTCC +
Preference number: 4 (lower is better)
Translates to: TTPWIVTGQTQRMNVVPACYGSF*ICLNSS
Trigger: GGAACTGTTCAGACAAATTCAAAAAGAGCCGTAACA...AGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR GCA 90 bp TCTTACAGATATAATGAGATCATGCAAGCAAATGCTAACTTAGTTCCCAGCATTACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCA +
Preference number: 4 (lower is better)
Translates to: SYRYNEIMQANANLVPSITSSGL*LADLNA
Trigger: TGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGT...AATGCTGGGAACTAAGTTAGCATTTGCTTGCATGATCTCATTATATCTGTAAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp TCTTACAGATATAATGAGATCATGCAAGCAAATGCTAACTTAGTTCCCAGCATTGGGGGCGACCTGGGATaGTCAGGGCTTTTCTCAGAT +
Preference number: 4 (lower is better)
Translates to: SYRYNEIMQANANLVPSIGGDLG*SGLFSD
Trigger: ATCTGAGAAAAGCCCTGAGCATCCCAGGTCGCCCCC...AATGCTGGGAACTAAGTTAGCATTTGCTTGCATGATCTCATTATATCTGTAAGA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTGTGAATGGCCCTGTGTaGAGGCAGGGCCAAGGTGAA +
Preference number: 4 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRIVNGPV*RQGQGE
Trigger: TTCACCTTGGCCCTGCCTCCACACAGGGCCATTCAC...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATACTAATTGTGTGTTATTTGAGTCACAATGAAAAAGGTTTCCCGCAGAGGATTGTTGCATGGAAATGGTaGCCGCTCCAGGAGAGCCCA +
Preference number: 4 (lower is better)
Translates to: ILIVCYLSHNEKGFPQRIVAWKW*PLQESP
Trigger: TGGGCTCTCCTGGAGCGGCCACCATTTCCATGCAAC...AATCCTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAACACACAATTAGTAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGAGATGCCAGGGGCCTTaGGGACATGTAAATACCAGA +
Preference number: 4 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHRRCQGP*GHVNTR
Trigger: TCTGGTATTTACATGTCCCCAAGGCCCCTGGCATCT...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR TCA 90 bp ACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACCTTTTTGAATTTGTCTaGACAGTTCCTTGGAGGCGT +
Preference number: 4 (lower is better)
Translates to: TFFIMRKSNYSLDSHRADLFEFV*TVPWRR
Trigger: ACGCCTCCAAGGAACTGTTCAGACAAATTCAAAAAG...GTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTCCAACTCGGCATCCTTaGAGACACAGCGCAGGATCT +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCPTRHP*RHSAGS
Trigger: AGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGG...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGCTTTCACGGCCACTTTaGGATGTTTCTTGGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHRLSRPL*DVSWAS
Trigger: AGAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAG...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTTTGCATGGATGCTGCTaGGACGGGGTCAGAAGAGAG +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCLHGCC*DGVRRE
Trigger: CTCTCTTCTGACCCCGTCCCAGCAGCATCCATGCAA...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GGTTGTTTCTGTTCTAAGGACTTTGCATGTGTTAGCTCTGTAAATTCTCATAACCATGGGGCAGAGCCTTaGGTACCTAAGAACTCTAGC +
Preference number: 4 (lower is better)
Translates to: GCFCSKDFACVSSVNSHNHGAEP*VPKNSS
Trigger: GCTAGAGTTCTTAGGTACCCAAGGCTCTGCCCCATG...GTTATGAGAATTTACAGAGCTAACACATGCAAAGTCCTTAGAACAGAAACAACC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
3UTR CAA 72 bp ACTTTAGAGCATTTCTATCACCCTGGGAAAGATTCTTaGTGCCCTTTTGCAGTCACTGTTAGTTCCAACCTC +
Preference number: 4 (lower is better)
Translates to: TLEHFYHPGKDS*CPFAVTVSSNL
Trigger: GAGGTTGGAACTAACAGTGACTGCAAAAGGGCACAAAGAATCTTTCCCAGGGTGATAGAAATGCTCTAAAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR TCA 90 bp TTGCTTCAGTTTTATGGGATGTTTATACATGTGTGTCCTGGGTCATGGCGTACCTTATTTGAGTCACAATaGAAAAGGTTTCCCGCAGAG +
Preference number: 4 (lower is better)
Translates to: LLQFYGMFIHVCPGSWRTLFESQ*KRFPAE
Trigger: CTCTGCGGGAAACCTTTTTCATTGTGACTCAAATAA...GGTACGCCATGACCCAGGACACACATGTATAAACATCCCATAAAACTGAAGCAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CCA 90 bp GAAAAGAACATCACTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGATAATACATTCCTGTaGTTTAAAGCCACCCAGTTT +
Preference number: 4 (lower is better)
Translates to: EKNITNTGWNGSQAQALSDNTFL*FKATQF
Trigger: AAACTGGGTGGCTTTAAACCACAGGAATGTATTATC...TGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAGTGATGTTCTTTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp TCACCAGCCGAGAGGCTTTTCCATTGTTTCCACTTTTaGGCTGTGATAAATAAAGCTGCTATGAACATCTGT +
Preference number: 4 (lower is better)
Translates to: SPAERLFHCFHF*AVINKAAMNIC
Trigger: ACAGATGTTCATAGCAGCTTTATTTATCACAGCCAAAAAGTGGAAACAATGGAAAAGCCTCTCGGCTGGTGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp CATGCTGCCATGAGTCCGTTTAATTTGTTCCCAAACTaGCTTATGCCAGTTATACCTGCTCTTGCAATTATA +
Preference number: 4 (lower is better)
Translates to: HAAMSPFNLFPN*LMPVIPALAII
Trigger: TATAATTGCAAGAGCAGGTATAACTGGCATAAGCAAGTTTGGGAACAAATTAAACGGACTCATGGCAGCATG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
3UTR CAA 72 bp TTTAGGAGAGAATTCTACATGCTGATGAAGTTGAACTaGCTTCTGCCTAATTTCTACTGGGCTCTAATTCCT +
Preference number: 4 (lower is better)
Translates to: FRREFYMLMKLN*LLPNFYWALIP
Trigger: AGGAATTAGAGCCCAGTAGAAATTAGGCAGAAGCAAGTTCAACTTCATCAGCATGTAGAATTCTCTCCTAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp TGTGATTTTAGGAGAGAATTCTACATGCTGATGAAGTaGAACTTGCTTCTGCCTAATTTCTACTGGGCTCTA +
Preference number: 4 (lower is better)
Translates to: CDFRREFYMLMK*NLLLPNFYWAL
Trigger: TAGAGCCCAGTAGAAATTAGGCAGAAGCAAGTTCAACTTCATCAGCATGTAGAATTCTCTCCTAAAATCACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp AGCAAATTCCAGAACGGCACACAAGACAATCTCATTTaGGCAGTAAGATGTGAATATTCAAAGGTGCATTCA +
Preference number: 4 (lower is better)
Translates to: SKFQNGTQDNLI*AVRCEYSKVHS
Trigger: TGAATGCACCTTTGAATATTCACATCTTACTGCCAAAATGAGATTGTCTTGTGTGCCGTTCTGGAATTTGCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTCTGCTGCATAACGACTaGTCAGTTTCTGGTAAAACT +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCLLHND*SVSGKT
Trigger: AGTTTTACCAGAAACTGAGCAGTCGTTATGCAGCAG...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp AAAATTTACTTATTATTCCTGACAGAGGTGATAACGTaGATTCATCAGCACCTTGTCACACGGGTCCTTAAA +
Preference number: 4 (lower is better)
Translates to: KIYLLFLTEVIT*IHQHLVTRVLK
Trigger: TTTAAGGACCCGTGTGACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATTTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR GCA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTAGTTCTGGGAACTTTTaGTTCAGTTTTATGGGATGT +
Preference number: 4 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCSSGNF*FSFMGC
Trigger: ACATCCCATAAAACTGAAGCAAAAGTTCCCAGAACT...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp ACACTTAGTAAGGTTTTGTATGAGTTCTGGGAACTTTaGCTTCAGTTTTATGGGATGTTTATACATGTGTGT +
Preference number: 4 (lower is better)
Translates to: TLSKVLYEFWEL*LQFYGMFIHVC
Trigger: ACACACATGTATAAACATCCCATAAAACTGAAGCAAAAGTTCCCAGAACTCATACAAAACCTTACTAAGTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
3UTR CAA 72 bp CTCTTTAGGTATATGCCTAGGAGTGGAATTGCTGATTaGTGTGGTACATTTATGTTTACTTGTTGTAAAAAC +
Preference number: 4 (lower is better)
Translates to: LFRYMPRSGIAD*CGTFMFTCCKN
Trigger: GTTTTTACAACAAGTAAACATAAATGTACCACACAAATCAGCAATTCCACTCCTAGGCATATACCTAAAGAG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
3UTR CAA 72 bp TTCTCTTTCTCTTTAGGTATATGCCTAGGAGTGGAATaGCTGATTTGTGTGGTACATTTATGTTTACTTGTT +
Preference number: 4 (lower is better)
Translates to: FSFSLGICLGVE*LICVVHLCLLV
Trigger: AACAAGTAAACATAAATGTACCACACAAATCAGCAATTCCACTCCTAGGCATATACCTAAAGAGAAAGAGAA
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GGCCAGGACACCCATGGGAAGGGCTTGACGTCTCCACCACTGGGGGCAGGGGTGTCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCC +
Preference number: 5 (lower is better)
Translates to: GQDTHGKGLTSPPLGAGVSSGLC*ADLNAA
Trigger: GGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGA...CACCCCTGCCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGGTGTCCTGGCC
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCGCCTGGGCTCCGGCTTaGTGCTGGCGACTCCCACCC +
Preference number: 5 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSAWAPA*CWRLPP
Trigger: GGGTGGGAGTCGCCAGCACAAAGCCGGAGCCCAGGC...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCTCCCCCTCAGCCCCCTTCACCGCCTCTCACCCAATGTGCACCCACAGGCTTCAGCCGGGGCGAGGGCTaGGCTTTCACGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: PPPQPPSPPLTQCAPTGFSRGEG*AFTATL
Trigger: CAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCT...GAAGCCTGTGGGTGCACATTGGGTGAGAGGCGGTGAAGGGGGCTGAGGGGGAGG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGAGCCGGGGCGAGGGCTaGGCTTTCACGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGSRGEG*AFTATL
Trigger: CAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCT...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGACGGCCCCACATGTCTaGCTTCATCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: REKSKARALPWRTAPSPWTAPHV*LHPWGW
Trigger: CCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGT...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CTGGCGTTCCCCCGCTGGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTTCACCACCTGAACAGTTCCTaGGAGGCGTCCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: LAFPRWWQHHAHPCLSLHHLNSS*EASLWL
Trigger: CAGCCACAGGGACGCCTCCAAGGAACTGTTCAGGTG...GTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGGGAACGCCAG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR CAA 90 bp GCCCTGCCCACCTCCCAGGCTGATAAAGACTGGACTGGAGATGGCGTGGGGTCCTCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCC +
Preference number: 5 (lower is better)
Translates to: ALPTSQADKDWTGDGVGSSSGLC*ADLNAA
Trigger: GGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGA...GGACCCCACGCCATCTCCAGTCCAGTCTTTATCAGCCTGGGAGGTGGGCAGGGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp GGCCAGGACACCCATGGGAAGGGCTTGACGTCTCCACCACTGGGGGCAGGGGTGGCCAACTCGGCATCCTaGGAGACACAGCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: GQDTHGKGLTSPPLGAGVANSAS*ETQRRI
Trigger: GATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGC...CACCCCTGCCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGGTGTCCTGGCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGACATCTCGTCCATGGCTaGGATCTGCTCCTGCGGCTT +
Preference number: 5 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRHLVHG*DLLLRL
Trigger: AAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATG...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGGCAGACCACGGTGACTCAGGCTaGGCGGGCACTTGCAGGGCT +
Preference number: 5 (lower is better)
Translates to: DTWTPRHARPGPAAPQADHGDSG*AGTCRA
Trigger: AGCCCTGCAAGTGCCCGCCAAGCCTGAGTCACCGTG...GTCTGCCTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGAAGGCCAGGGCGGGTTaGCTGACAGAGGCGCAGGGC +
Preference number: 5 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGKARAG*LTEAQG
Trigger: GCCCTGCGCCTCTGTCAGCAAACCCGCCCTGGCCTT...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGCTCTGTTTCCCAGGATaGGCTCAGCTAGGCAGCTGG +
Preference number: 5 (lower is better)
Translates to: REKSKARALPWRTAPSPWLCFPG*AQLGSW
Trigger: CCAGCTGCCTAGCTGAGCCAATCCTGGGAAACAGAG...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS TCA 90 bp TCCAGCCAAGGATGTCAGCGAGGCCACCTGCCTCACCAGCCTGGCTaGAGCCTCCAGGCTGCAGAGGCAGCTGTGGACATGCTCCCACTG +
Preference number: 5 (lower is better)
Translates to: SSQGCQRGHLPHQPG*SLQAAEAAVDMLPL
Trigger: CAGTGGGAGCATGTCCACAGCTGCCTCTGCAGCCTGGAGGCTTCAGCCAGGCTGGTGAGGCAGGTGGCCTCGCTGACATCCTTGGCTGGA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCAGCCGGGGCGAGGGCTaGGCTTTCACGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: NKTHWALAPRVRAAPAARSRGEG*AFTATL
Trigger: CAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCT...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTCCGCAGGCTTCTACTTaGGCCCCACAGCCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: REGTKPRGELEPPLGGRPPQAST*APQPRR
Trigger: TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGG...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGAGGCCCTGGAGTAATTaGGCTTGGGGACGTCCCCAC +
Preference number: 5 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGRPWSN*AWGRPH
Trigger: GTGGGGACGTCCCCAAGCCAAATTACTCCAGGGCCT...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CCCCGCTGGTGGCAGCACCACGCCCATCCCTGCCTCAGCCTTCACGTGGCCTTCTCAGAGGGTCCTTCTTaGCCTCTTCCAGTTCCTGGC +
Preference number: 5 (lower is better)
Translates to: PRWWQHHAHPCLSLHVAFSEGPS*PLPVPG
Trigger: GCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTGA...GAAGGCCACGTGAAGGCTGAGGCAGGGATGGGCGTGGTGCTGCCACCAGCGGGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR CAA 90 bp AGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCACTGGGGCTGGGGACTaGACTGAGCTGTTGACAGGC +
Preference number: 5 (lower is better)
Translates to: RAQSLPFTPMSPQTGLLGTGAGD*TELLTG
Trigger: GCCTGTCAACAGCTCAGTCAAGTCCCCAGCCCCAGT...GCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CCAGGACACCCATGGGAAGGGCTTGACGTCTCCACCACTGGGGGCAGGGGTGCTCAGCGCAGGATCTCATaGAACACGGCTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: PGHPWEGLDVSTTGGRGAQRRIS*NTALLS
Trigger: GGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTG...AGCACCCCTGCCCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGGTGTCCTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCAGCTGGGGCTTGGGTTaGGGCTCAGCTCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: NKTHWALAPRVRAAPAARSWGLG*GSAPRF
Trigger: GAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGCT...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp AATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAGCCGCTCCCGCAGCCCGCGGCTTAAGCTGGGGCTaGGGTTTGGGCTCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: NKTHWALAPRVRAAPAARGLSWG*GLGSAP
Trigger: GGGAGCTGAGCCCAAACCCAAGCCCCAGCTTAAGCC...GCGGGCTGCGGGAGCGGCTCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGCCGCAGGCTTCTACTTaGGCCCCACAGCCCCGGAGA +
Preference number: 5 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLPQAST*APQPRR
Trigger: TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGG...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS GCA 90 bp GGGTCACCACCAGGATCTGGTACTCCACGTGTCCAGACATCATCTTaGCCCGTACCTCCTGGTGCTGGGGCACAGTCAGGTCGAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GSPPGSGTPRVQTSS*PVPPGAGAQSGRGQ
Trigger: CTGGCCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGTGGTGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS GCA 90 bp CCCTGGGGATCTGGTACCAAGAACTGGACGACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCAGCCAGACGGGTCACCACCAGGATC +
Preference number: 5 (lower is better)
Translates to: PWGSGTKNWTTSSGL*LADLNAARRVTTRI
Trigger: GATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTACCAGATCCCCAGGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTCTGTGCTTGGCCGACTaGAACGCAGCCAGACGGGTC +
Preference number: 5 (lower is better)
Translates to: STVWCLDLCTSALGVGRSLCLAD*NAARRV
Trigger: GACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAG...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTTCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCC +
Preference number: 5 (lower is better)
Translates to: SRAVYTLERQGLTSPFRASSGLC*ADLNAA
Trigger: GGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGA...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGCCAACTCGGCATCCTaGGAGACACAGCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: QTLRTTKASGQKPERIMPANSAS*ETQRRI
Trigger: GATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CAA 90 bp GAGAGCCGCTCCCGCAGCCCGCAGGCTTCTACTTTGGCCCCACAGCCCCGGAGATGTTTCTTGGGCTTCTaGGAGCGCATAATGCCCAGA +
Preference number: 5 (lower is better)
Translates to: ESRSRSPQASTLAPQPRRCFLGF*ERIMPR
Trigger: TCTGGGCATTATGCGCTCCAAGAAGCCCAAGAAACA...TCTCCGGGGCTGTGGGGCCAAAGTAGAAGCCTGCGGGCTGCGGGAGCGGCTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGCTGCCACTGGTGGCTaGGGCTTAAGCTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLAATGG*GLSWGL
Trigger: CAAGCCCCAGCTTAAGCCCAAGCCACCAGTGGCAGC...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCGGGCTGGGCTTCTGGTaGGCAAGGCATCCCCACACC +
Preference number: 5 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLGLGFW*ARHPHT
Trigger: GGTGTGGGGATGCCTTGCCAACCAGAAGCCCAGCCC...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCACGGCCCCACATGTCTaGCTTCATCCTTGGGGCTGG +
Preference number: 5 (lower is better)
Translates to: QTLRTTKASGQKPERIMPTAPHV*LHPWGW
Trigger: CCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGT...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GCTGAGCCCAGGCTGCAGGTAACAAACTGTCCATGCTGGCAGGTGGCAGAGGGGTGTCCAGACATCATCTaGCCCCGTACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: AEPRLQVTNCPCWQVAEGCPDII*PRTSWC
Trigger: GCACCAGGAGGTACGGGGCAAGATGATGTCTGGACA...CCCCTCTGCCACCTGCCAGCATGGACAGTTTGTTACCTGCAGCCTGGGCTCAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTGCTGCCACTGGTGGCTaGGGCTTAAGCTGGGGCTTG +
Preference number: 5 (lower is better)
Translates to: SRAVYTLERQGLTSPFRAAATGG*GLSWGL
Trigger: CAAGCCCCAGCTTAAGCCCAAGCCACCAGTGGCAGC...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGTTAGTCCCAGATACATaGTATGGACGTGGTCATGGG +
Preference number: 5 (lower is better)
Translates to: REKSKARALPWRTAPSPWLVPDT*YGRGHG
Trigger: CCCATGACCACGTCCATACAATGTATCTGGGACTAA...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGAGGCCTGTTGATCACTaGCCCAGTGGCCTGCCACCT +
Preference number: 5 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLRPVDH*PSGLPP
Trigger: AGGTGGCAGGCCACTGGGCAAGTGATCAACAGGCCT...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGGGAGGGGACAAAGCCCAGAGGAGAGCTGGAGCCACCTCTCGGAGGAAGACCTGACATGATTGGCCAGTaGGCCTGGAGAGAGCTAGCC +
Preference number: 5 (lower is better)
Translates to: REGTKPRGELEPPLGGRPDMIGQ*AWRELA
Trigger: GGCTAGCTCTCTCCAGGCCAACTGGCCAATCATGTC...AGGTCTTCCTCCGAGAGGTGGCTCCAGCTCTCCTCTGGGCTTTGTCCCCTCCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CGGGAGAAGTCTAAGGCACGGGCCCTGCCCTGGCGCACGGCTCCTTCTCCCTGGCCTGGGAAAGATTCTTaGTGCCCTTTTGCAGTCACT +
Preference number: 5 (lower is better)
Translates to: REKSKARALPWRTAPSPWPGKDS*CPFAVT
Trigger: AGTGACTGCAAAAGGGCACAAAGAATCTTTCCCAGG...CCAGGGAGAAGGAGCCGTGCGCCAGGGCAGGGCCCGTGCCTTAGACTTCTCCCG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS TCA 90 bp AGACCAAGAACTGGACGACATCCTCGGGCCTGTGCTTGGCCGACTTaGACGCAGCCAGACGGGTCACCACCAGGATCTGGTACTCCACGT +
Preference number: 5 (lower is better)
Translates to: RPRTGRHPRACAWPT*TQPDGSPPGSGTPR
Trigger: ACGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
CDS TCA 90 bp GTACCAAGAACTGGACGACATCCTCGGGCCTGTGCTTGGCCGACTTaGACGCAGCCAGACGGGTCACCACCAGGATCTGGTACTCCACGT +
Preference number: 5 (lower is better)
Translates to: VPRTGRHPRACAWPT*TQPDGSPPGSGTPR
Trigger: ACGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS GCA 90 bp GCTGGCCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTaGTGTGTGAGCCCCCACCTGACAGCCAGACGTTCAGTCCCTCAA +
Preference number: 5 (lower is better)
Translates to: AGQEGHGWGHTMENA*CVSPHLTARRSVPQ
Trigger: TTGAGGGACTGAACGTCTGGCTGTCAGGTGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCCAGC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS CCA 90 bp TGCTTGGCCGACTTGAACGCAGCCAGACGGGTCACCACCAGGATCTaGTACTCCACGTGTCCAGACATCATCTTGCCCCGTACCTCCTGG +
Preference number: 5 (lower is better)
Translates to: CLADLNAARRVTTRI*YSTCPDIILPRTSW
Trigger: CCAGGAGGTACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS-3UTR CAA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCATGTCCAGACATCATCTaGCCCCGTACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: RPHMSCFILGAGLLVGKACPDII*PRTSWC
Trigger: GCACCAGGAGGTACGGGGCAAGATGATGTCTGGACA...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp AGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGATGTCCAGACATCATCTaGCCCCGTACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: SPAPAVVRTCLVLGASVRCPDII*PRTSWC
Trigger: GCACCAGGAGGTACGGGGCAAGATGATGTCTGGACA...TCTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGTGTTTCTTGGGCTTCTaGGAGCGCATAATGCCCAGA +
Preference number: 5 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGCFLGF*ERIMPR
Trigger: TCTGGGCATTATGCGCTCCAAGAAGCCCAAGAAACA...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGACTCTGAACAGTTCCTaGGAGGCGTCCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLTLNSS*EASLWL
Trigger: CAGCCACAGGGACGCCTCCAAGGAACTGTTCAGAGT...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCAGCTGGGGCTTGGGTTaGGGCTCAGCTCCCAGGTTC +
Preference number: 5 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTSWGLG*GSAPRF
Trigger: GAACCTGGGAGCTGAGCCCAAACCCAAGCCCCAGCT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GGGGGTCTTTGTGATGGTGTCCAGAGAGTCCAGACCACTGAGGAGGTGGCGTCCCATCTCGTCCATGGCTaGGATCTGCTCCTGCGGCTT +
Preference number: 5 (lower is better)
Translates to: GGLCDGVQRVQTTEEVASHLVHG*DLLLRL
Trigger: AAGCCGCAGGAGCAGATCCAAGCCATGGACGAGATG...GGACGCCACCTCCTCAGTGGTCTGGACTCTCTGGACACCATCACAAAGACCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GGCCAGGAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTGCTGTGTGAGCCACGGGGGTTCTGGGTaGACAGGACTAACCGAGGAG +
Preference number: 5 (lower is better)
Translates to: GQEGHGWGHTMENACCVSHGGSG*TGLTEE
Trigger: CTCCTCGGTTAGTCCTGTCAACCCAGAACCCCCGTG...GCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTCCTGGCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp TGCGCCCTCAGAGGGTCCTTCTTTGCCTCTTCCAGTTCCTGGCGTTCCCCCGCTGCCAGAAGTCTGAAGTaGAGGTGTCAGCAGGACCCT +
Preference number: 5 (lower is better)
Translates to: CALRGSFFASSSSWRSPAARSLK*RCQQDP
Trigger: AGGGTCCTGCTGACACCTCAACTTCAGACTTCTGGC...AGCGGGGGAACGCCAGGAACTGGAAGAGGCAAAGAAGGACCCTCTGAGGGCGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000415264.5
CDS-3UTR CAA 90 bp CACTGGGACACATGGACTCCTAGACATGCTCGGCCTGGCCCTGCTGCTCCGCAGAGCCACAGAGCCCCTTaGAAGATAGCCTTTGACCAC +
Preference number: 5 (lower is better)
Translates to: HWDTWTPRHARPGPAAPQSHRAP*KIAFDH
Trigger: GTGGTCAAAGGCTATCTTCAAAGGGGCTCTGTGGCT...CTGCGGAGCAGCAGGGCCAGGCCGAGCATGTCTAGGAGTCCATGTGTCCCAGTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp AGCACTGTGTGGTGCCTAGACCTGTGTACCAGCGCTCTGGGGGTCGGGAGAAGTGGTAAGTCTCTTCACTaGGCACTGTGGGGTGAGGGG +
Preference number: 5 (lower is better)
Translates to: STVWCLDLCTSALGVGRSGKSLH*ALWGEG
Trigger: CCCCTCACCCCACAGTGCCAAGTGAAGAGACTTACC...ACTTCTCCCGACCCCCAGAGCGCTGGTACACAGGTCTAGGCACCACACAGTGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CAGGGCCCAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGGACTTGACTGAGCTGTaGACAGGCCTGTTGATCACT +
Preference number: 5 (lower is better)
Translates to: QGPVPSLHTDVPTDRPAGDLTEL*TGLLIT
Trigger: AGTGATCAACAGGCCTGTCAACAGCTCAGTCAAGTC...CCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTGGGCCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS GCA 90 bp CAGCCCCTGGGGATCTGGTACCTAAGAACTCTAGCAGCTCTGGGCTaGCTGCCAACTCGGCATCCTTGGAGACACAGCGCAGGATCTCAT +
Preference number: 5 (lower is better)
Translates to: QPLGIWYLRTLAALG*LPTRHPWRHSAGSH
Trigger: ATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAGAGTTCTTAGGTACCAGATCCCCAGGGGCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000446825.1
CDS-3UTR CAA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGATCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCC +
Preference number: 5 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGSSGLC*ADLNAA
Trigger: GGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGA...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CAGACCCTGAGGACGACGAAGGCCTCGGGGCAGAAGCCTGAGAGAATCATGCCCGCTTTCACGGCCACTTaGGGATGTTTCTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: QTLRTTKASGQKPERIMPAFTAT*GCFLGF
Trigger: GAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAGC...GGGCATGATTCTCTCAGGCTTCTGCCCCGAGGCCTTCGTCGTCCTCAGGGTCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCGAAAGGCCTGCCGCGTaGGGCCAGGCTGATAAGGAG +
Preference number: 5 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVERPAA*GQADKE
Trigger: CTCCTTATCAGCCTGGCCCAACGCGGCAGGCCTTTC...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGACCAGGGCTCCGTTTCTaGACCTGTGCCCACAGTGGA +
Preference number: 5 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPRPGLRF*TCAHSG
Trigger: TCCACTGTGGGCACAGGTCAAGAAACGGAGCCCTGG...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCTCACCCTTACCAAAATAAAGCCCAAGAAAGGCCTGCCGCGTTGGGCCAGGCTAAGGACCGAGGCTGGTaGCATGGAAATGGTGGCCGC +
Preference number: 5 (lower is better)
Translates to: PHPYQNKAQERPAALGQAKDRGW*HGNGGR
Trigger: GCGGCCACCATTTCCATGCAACCAGCCTCGGTCCTT...AGCCTGGCCCAACGCGGCAGGCCTTTCTTGGGCTTTATTTTGGTAAGGGTGAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTTACCTGAACAGTTCCTaGGAGGCGTCCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: GVQMTASRACMPWCHISRYLNSS*EASLWL
Trigger: CAGCCACAGGGACGCCTCCAAGGAACTGTTCAGGTA...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp GGGGTACAGATGACAGCCTCCAGGGCCTGCATGCCTTGGTGTCACATAAGCCGTCAGGGCCTGCATGCCTaGGTGTCACATAAGCCGTTC +
Preference number: 5 (lower is better)
Translates to: GVQMTASRACMPWCHISRQGLHA*VSHKPF
Trigger: GAACGGCTTATGTGACACCAAGGCATGCAGGCCCTG...ACGGCTTATGTGACACCAAGGCATGCAGGCCCTGGAGGCTGTCATCTGTACCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGGAGAGTGGCTGGACTTaGCTGTCTCGTCTGTACCTT +
Preference number: 5 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGESGWT*LSRLYL
Trigger: AAGGTACAGACGAGACAGCAAAGTCCAGCCACTCTC...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGGGAATGGGCCTCTGCTaGCTGCTGAATGCCACGTGC +
Preference number: 5 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQGMGLC*LLNATC
Trigger: GCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCC...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS GCA 90 bp CTGTACTTTTTGGAGACCAAGAACTGGACGACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCAGCCAGACGGGTCACCACCAGGATC +
Preference number: 5 (lower is better)
Translates to: LYFLETKNWTTSSGL*LADLNAARRVTTRI
Trigger: GATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAAAAAGTACAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
CDS GCA 90 bp ATGGGGCAGAGCCTTGGGTACCTAAGAACTCTAGCAGCTCTGGGCTaGCTGCCAACTCGGCATCCTTGGAGACACAGCGCAGGATCTCAT +
Preference number: 5 (lower is better)
Translates to: MGQSLGYLRTLAALG*LPTRHPWRHSAGSH
Trigger: ATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGCAGGCAGCCCAGAGCTGCTAGAGTTCTTAGGTACCCAAGGCTCTGCCCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTGCATTGTGCCTGCGGTaGCATGGATGCTGCTGGGAC +
Preference number: 5 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSALCLR*HGCCWD
Trigger: GTCCCAGCAGCATCCATGCAACCGCAGGCACAATGC...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGGCGCAGCTTCAGGGACCTaGCTCTGGGGCACGTATATA +
Preference number: 5 (lower is better)
Translates to: PTWVSVKGRGGNPTSRYGAASGT*LWGTYI
Trigger: TATATACGTGCCCCAGAGCAAGGTCCCTGAAGCTGC...GCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCCACCTGGGTGTCTGTGAAAGGCCGAGGTGGAAACCCAACTTCAAGGTACGGCTGCAGGCAGGTGCATTaGTTCATACAGGAGCCAGCC +
Preference number: 5 (lower is better)
Translates to: PTWVSVKGRGGNPTSRYGCRQVH*FIQEPA
Trigger: GGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCA...GCCGTACCTTGAAGTTGGGTTTCCACCTCGGCCTTTCACAGACACCCAGGTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTGTGCCTCGGCAGATGCCAGGGGCCTaGGGGACATGTAAATACCAG +
Preference number: 5 (lower is better)
Translates to: LALLLRRQTLVFHFPVPRQMPGA*GTCKYQ
Trigger: CTGGTATTTACATGTCCCCAAGGCCCCTGGCATCTG...CCGAGGCACAGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTGCTCCTATGTCACTaGACCCAAAGCAGGTGGGGA +
Preference number: 5 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLLLLCH*TQSRWG
Trigger: TCCCCACCTGCTTTGGGTCAAGTGACATAGGAGCAG...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GCCAAGCTGGACTGGAACCCTGGCCGTTTGTGCCCACAGAACCTGGCTGCTGCTGGGACCATTCATAGCTaGATGCTGAGACTTCAGCTC +
Preference number: 5 (lower is better)
Translates to: AKLDWNPGRLCPQNLAAAGTIHS*MLRLQL
Trigger: GAGCTGAAGTCTCAGCATCAAGCTATGAATGGTCCC...AGCAGCAGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCAGTCCAGCTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCAAGGGACCCCAAGTGTaGCCAGGAAACCCCCAGAAG +
Preference number: 5 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTKGPQV*PGNPQK
Trigger: CTTCTGGGGGTTTCCTGGCAACACTTGGGGTCCCTT...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CAGTCCCTTCCCTTCACACCGATGTCCCCACAGACAGGCCTGCTGGGCCAGGGGCGAGAGGCTTTTCCATaGTTTCCACTTTTTGGCTGT +
Preference number: 5 (lower is better)
Translates to: QSLPFTPMSPQTGLLGQGREAFP*FPLFGC
Trigger: ACAGCCAAAAAGTGGAAACAATGGAAAAGCCTCTCG...CCCCTGGCCCAGCAGGCCTGTCTGTGGGGACATCGGTGTGAAGGGAAGGGACTG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS TCA 90 bp TGCCTGCCAACTCGGCATCCTTGGAGACACAGCGCAGGATCTCATTaGACACGGCTCTCCTCTCCCGGATGTCAGACTCCCCAACAAACA +
Preference number: 5 (lower is better)
Translates to: CLPTRHPWRHSAGSH*TRLSSPGCQTPQQT
Trigger: TGTTTGTTGGGGAGTCTGACATCCGGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGCAGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000446825.1
CDS-3UTR CAA 90 bp CTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTGTGCCTCGGGCTTTCACGGCCACTTaGGGATGTTTCTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: LALLLRRQTLVFHFPVPRAFTAT*GCFLGF
Trigger: GAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAGC...CCGAGGCACAGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCAGCCGGGGCGAGGGCTaGGCTTTCACGGCCACTTTG +
Preference number: 5 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALSRGEG*AFTATL
Trigger: CAAAGTGGCCGTGAAAGCCAAGCCCTCGCCCCGGCT...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000445102.1
ENST00000458740.5
CDS-3UTR CAA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTGGGCTGGGCTTCTGGTaGGCAAGGCATCCCCACACC +
Preference number: 5 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCGLGFW*ARHPHT
Trigger: GGTGTGGGGATGCCTTGCCAACCAGAAGCCCAGCCC...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp CGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGGTTGGCAAGGCATCAGGAGAGAGAGACTaGCATCAGAACACTCCAGAC +
Preference number: 5 (lower is better)
Translates to: RPHMSCFILGAGLLVGKASGERD*HQNTPD
Trigger: GTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTGA...TGCCTTGCCAACCAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000304031.8
ENST00000651498.1
CDS-3UTR CAA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTAGGCGACAAGGATCATaGATTGGCCATGAGTCGCAG +
Preference number: 5 (lower is better)
Translates to: SRAVYTLERQGLTSPFRARRQGS*IGHESQ
Trigger: CTGCGACTCATGGCCAATCAATGATCCTTGTCGCCT...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GCTGGAGAGGGACGTGATCAGATGCAGGACAGAGCAGACAGGTCCTGGCACGGGTGGGACCTAGAGCACTaGTTAGGGGAAAATCAGCAA +
Preference number: 5 (lower is better)
Translates to: AGEGRDQMQDRADRSWHGWDLEH*LGENQQ
Trigger: TTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA...CCCGTGCCAGGACCTGTCTGCTCTGTCCTGCATCTGATCACGTCCCTCTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GACACCTCGCTACGGCCCCACATGTCTTGCTTCATCCTTGGGGCTGGGCTTCTGATCTCGCTGTACTTTTaGGAGACCAAGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: DTSLRPHMSCFILGAGLLISLYF*ETKNWT
Trigger: CGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGAT...CAGAAGCCCAGCCCCAAGGATGAAGCAAGACATGTGGGGCCGTAGCGAGGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CAA 90 bp TACCAAGCCCCAGTGCGGAGCCACAAGTGGAGGACATCCTGTGACCCGAGAAGGATCTCGCTGTACTTTTaGGAGACCAAGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: YQAPVRSHKWRTSCDPRRISLYF*ETKNWT
Trigger: CGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGAT...CCTTCTCGGGTCACAGGATGTCCTCCACTTGTGGCTCCGCACTGGGGCTTGGTA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp TGTGTTCTTCAGCCAAAGGTTGGCACAGACCACCAAAGTCCATCTCGGTTTGGCGCCAACTCGGCATCCTaGGAGACACAGCGCAGGATC +
Preference number: 5 (lower is better)
Translates to: CVLQPKVGTDHQSPSRFGANSAS*ETQRRI
Trigger: GATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGC...GCCAAACCGAGATGGACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCAAGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTGGCTTAAGCTGGGGCTaGGGTTTGGGCTCAGCTCCC +
Preference number: 5 (lower is better)
Translates to: PSVARKPPEARTKQSRILGLSWG*GLGSAP
Trigger: GGGAGCTGAGCCCAAACCCAAGCCCCAGCTTAAGCC...AAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACTTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GTGCACAAACAGCCTCCCGAGAAGAACAGAAAGTCCCCCACCAAAGGGCAGGTGCTGGGAAGACCAGCTTaGCAGGCAGGTGCATTTGTT +
Preference number: 5 (lower is better)
Translates to: VHKQPPEKNRKSPTKGQVLGRPA*QAGAFV
Trigger: AACAAATGCACCTGCCTGCAAAGCTGGTCTTCCCAG...CACCTGCCCTTTGGTGGGGGACTTTCTGTTCTTCTCGGGAGGCTGTTTGTGCAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGACCCTCAGGGCTGGCTTaGGTGTCTATCAGAAAAGGG +
Preference number: 5 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRPSGLA*VSIRKG
Trigger: CCCTTTTCTGATAGACACCAAAGCCAGCCCTGAGGG...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAACCTTGTGTGAGAGCTaGAGACTCAGAGGAGCCCGT +
Preference number: 5 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRTLCES*RLRGAR
Trigger: ACGGGCTCCTCTGAGTCTCAAGCTCTCACACAAGGT...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGCAGGGCCGTCTATACCCTGGAGAGGCAGGGCCTGACTTCTCCCTTTAGAGCTTGTCTCGTCTGTACCTaGTGTGAGAGCTTGAGACTC +
Preference number: 5 (lower is better)
Translates to: SRAVYTLERQGLTSPFRACLVCT*CESLRL
Trigger: GAGTCTCAAGCTCTCACACAAGGTACAGACGAGACA...AGCTCTAAAGGGAGAAGTCAGGCCCTGCCTCTCCAGGGTATAGACGGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCTGGAACCCTGGCCGTTaGTGCCCACAGAACCTGGCT +
Preference number: 5 (lower is better)
Translates to: SVARKPPEARTKQSRILPWNPGR*CPQNLA
Trigger: AGCCAGGTTCTGTGGGCACAAACGGCCAGGGTTCCA...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp ACAGTGGATGAATACACAACGGGCAGGCCAGGTTCTGCCAGTGACCCCAAGCAGTCAGGAGAGAGAGACTaGCATCAGAACACTCCAGAC +
Preference number: 5 (lower is better)
Translates to: TVDEYTTGRPGSASDPKQSGERD*HQNTPD
Trigger: GTCTGGAGTGTTCTGATGCAAGTCTCTCTCTCCTGA...CTGCTTGGGGTCACTGGCAGAACCTGGCCTGCCCGTTGTGTATTCATCCACTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAGGACGCTGTGAGTCACCTGACCCTGAACTaGAGTTTCCCACCACACAGA +
Preference number: 5 (lower is better)
Translates to: RQVHLFIQEPACPKDAVSHLTLN*SFPPHR
Trigger: TCTGTGTGGTGGGAAACTCAAGTTCAGGGTCAGGTG...ACTCACAGCGTCCTTGGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATGAGAGAGCGGTGGTGTaGGGATGGGCCGAGGTGAGG +
Preference number: 5 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHERAVV*GWAEVR
Trigger: CCTCACCTCGGCCCATCCCAACACCACCGCTCTCTC...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CTGGCCCTGCTGCTCCGCAGGCAGACTCTAGTATTTCATTTCCCTGTGCCTCGGTACGAGCCCTGCTTTTaGTGGCATTTCCCCAATTCA +
Preference number: 5 (lower is better)
Translates to: LALLLRRQTLVFHFPVPRYEPCF*WHFPNS
Trigger: TGAATTGGGGAAATGCCACAAAAAGCAGGGCTCGTA...CCGAGGCACAGGGAAATGAAATACTAGAGTCTGCCTGCGGAGCAGCAGGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp AGTGTTGCCAGGAAACCCCCAGAAGCCAGGACAAAACAAAGTAGGATCCTTCCCCTGTTGACAGGCCTGTaGATCACTTGCCCAGTGGCC +
Preference number: 5 (lower is better)
Translates to: SVARKPPEARTKQSRILPLLTGL*ITCPVA
Trigger: GGCCACTGGGCAAGTGATCAACAGGCCTGTCAACAG...GGGAAGGATCCTACTTTGTTTTGTCCTGGCTTCTGGGGGTTTCCTGGCAACACT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCTGCTATGTGCTGAGTaGGCAGAGAAGCATCAGGCC +
Preference number: 5 (lower is better)
Translates to: LTQAGMGHRHRLYQATRILLCAE*AEKHQA
Trigger: GGCCTGATGCTTCTCTGCCAACTCAGCACATAGCAG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GGGAAAGCTATGACCCAGTTTGCTGAGAGCTGCAATGACGAACATTGGCTCTGTCAGCGCAGGATCTCATaGAACACGGCTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: GKAMTQFAESCNDEHWLCQRRIS*NTALLS
Trigger: GGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTG...ACAGAGCCAATGTTCGTCATTGCAGCTCTCAGCAAACTGGGTCATAGCTTTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000304031.8
CDS-3UTR CAA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACACAGCGCAGGATCTCATaGAACACGGCTCTCCTCTCC +
Preference number: 5 (lower is better)
Translates to: NHKTWHSRETSSFTTEATQRRIS*NTALLS
Trigger: GGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTG...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp ACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGCACGGGGAACAGAGGTGATAACGTaGATTCATCAGCACCTTGTC +
Preference number: 5 (lower is better)
Translates to: TWHSRETSSFTTEATARGTEVIT*IHQHLV
Trigger: GACAAGGTGCTGATGAATCAACGTTATCACCTCTGT...TCCCCGTGCTGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp GAGTCCGGCACCAGCAGTGGTGAGAACCTGCCTTGTCCTGGGGGCATCTGTGAGACGGTCAACTTTCTTTaGAAAACTTCCCTTCTGTCT +
Preference number: 5 (lower is better)
Translates to: ESGTSSGENLPCPGGICETVNFL*KTSLLS
Trigger: AGACAGAAGGGAAGTTTTCAAAAGAAAGTTGACCGT...CTCACAGATGCCCCCAGGACAAGGCAGGTTCTCACCACTGCTGGTGCCGGACTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCTGTCTGAACAGTTCCTaGGAGGCGTCCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALCLNSS*EASLWL
Trigger: CAGCCACAGGGACGCCTCCAAGGAACTGTTCAGACA...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CAA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCTTTCTACATGGGTCTaGGCTGTGCAGTTACTGGCC +
Preference number: 5 (lower is better)
Translates to: LTQAGMGHRHRLYQATRILSTWV*AVQLLA
Trigger: GGCCAGTAACTGCACAGCCAAGACCCATGTAGAAAG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp GAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCCCAAAGTCCATCTCGGTTaGGCACTACGTGTGGTTACT +
Preference number: 5 (lower is better)
Translates to: EDQLCRQVHLFIQEPACPKVHLG*ALRVVT
Trigger: AGTAACCACACGTAGTGCCAAACCGAGATGGACTTT...GGGACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp ACGCCCACAAGCAAGGGCCTGGTAATGCCACTTACAGCCCATCGAGCTGAGAAAAGTTCAAGGCAGCACTaGCCAGCCACAAAGAACATT +
Preference number: 5 (lower is better)
Translates to: TPTSKGLVMPLTAHRAEKSSRQH*PATKNI
Trigger: AATGTTCTTTGTGGCTGGCAAGTGCTGCCTTGAACT...TTTCTCAGCTCGATGGGCTGTAAGTGGCATTACCAGGCCCTTGCTTGTGGGCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGAAAAGGCACGTGCATaGTGCCTGCGGTTGCATGGA +
Preference number: 5 (lower is better)
Translates to: NHKTWHSRETSSFTTEATEKARA*CLRLHG
Trigger: TCCATGCAACCGCAGGCACAATGCACGTGCCTTTTC...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp GGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGATTTTACCGGGAGAGTGCAGCTATaGATCTGGAAGGACCTAGAA +
Preference number: 5 (lower is better)
Translates to: GTHTALAKILLNSFLDFTGRVQL*IWKDLE
Trigger: TTCTAGGTCCTTCCAGATCAATAGCTGCACTCTCCC...GGTAAAATCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp ACAGGACTAACCGAGGAGTGGGGTAAAATTGTAGCCACTATTTACTGTGGTTGTACCCATGGGAAGGGCTaGACGTCTCCACCACTGGGG +
Preference number: 5 (lower is better)
Translates to: TGLTEEWGKIVATIYCGCTHGKG*TSPPLG
Trigger: CCCCAGTGGTGGAGACGTCAAGCCCTTCCCATGGGT...ACAACCACAGTAAATAGTGGCTACAATTTTACCCCACTCCTCGGTTAGTCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp TGGGACCTAGAGCACTTGTTAGGGGAAAATCAGCAAAGTGGCGATAACACCAAAACTCTGAACAGTTCCTaGGAGGCGTCCCTGTGGCTG +
Preference number: 5 (lower is better)
Translates to: WDLEHLLGENQQSGDNTKTLNSS*EASLWL
Trigger: CAGCCACAGGGACGCCTCCAAGGAACTGTTCAGAGT...TTTGGTGTTATCGCCACTTTGCTGATTTTCCCCTAACAAGTGCTCTAGGTCCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp TTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACACGGGACCCACACTTTTaGAGCAGGGACTCCCCAAGC +
Preference number: 5 (lower is better)
Translates to: FFIMRKSNYSLDSHRADTRDPHF*SRDSPS
Trigger: GCTTGGGGAGTCCCTGCTCAAAAAGTGTGGGTCCCG...TGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp GCAGAATGGAATGGGCCTCTGCTTGCTGCTGAATGCCACGTGCTCAGGACAGGTTTTGATAGAGAGAATTaGACATGTCTGGCAGCAGCT +
Preference number: 5 (lower is better)
Translates to: AEWNGPLLAAECHVLRTGFDREN*TCLAAA
Trigger: AGCTGCTGCCAGACATGTCAAATTCTCTCTATCAAA...ACCTGTCCTGAGCACGTGGCATTCAGCAGCAAGCAGAGGCCCATTCCATTCTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CTAACACAGGCTGGAATGGGTCACAGGCACAGGCTTTATCAGGCGACAAGGATCCACCAGCTCTCCAGTTaGTGCCACATGTTATCTAAG +
Preference number: 5 (lower is better)
Translates to: LTQAGMGHRHRLYQATRIHQLSS*CHMLSK
Trigger: CTTAGATAACATGTGGCACAAACTGGAGAGCTGGTG...GATCCTTGTCGCCTGATAAAGCCTGTGCCTGTGACCCATTCCAGCCTGTGTTAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp CACCCTCCCTCCCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCTCTGTGTACAAGCCTTaGACTGGACATATATTTCTC +
Preference number: 5 (lower is better)
Translates to: HPPSPSCPRGIRHIGLWLSVYKP*TGHIFL
Trigger: GAGAAATATATGTCCAGTCAAAGGCTTGTACACAGA...GAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGGGAGGGAGGGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp ACTCCCTGGATAGTCACAGGGCAGACACAAAGAATGAATGTGGTTCCTGCTCTCTGTTTCTTGGGCTTCTaGGAGCGCATAATGCCCAGA +
Preference number: 5 (lower is better)
Translates to: TPWIVTGQTQRMNVVPALCFLGF*ERIMPR
Trigger: TCTGGGCATTATGCGCTCCAAGAAGCCCAAGAAACA...GAGAGCAGGAACCACATTCATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CAA 90 bp GGGAAGACCAGCTTTGCAGGCAGGTGCATTTGTTCATACAGGAGCCAGCCTGTCTGTAATAACGCTCTCTaGTCCCTAATCAAAACCAGG +
Preference number: 5 (lower is better)
Translates to: GKTSFAGRCICSYRSQPVCNNAL*SLIKTR
Trigger: CCTGGTTTTGATTAGGGACAAGAGAGCGTTATTACA...GACAGGCTGGCTCCTGTATGAACAAATGCACCTGCCTGCAAAGCTGGTCTTCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CAGCTCTGGAACACACACGGCTCTGGCCAAGATCCTGCTCAACTCCTTCCTCGAAAGTTCCTCAGGTTATaGCCTGTAATAGCAAAAACC +
Preference number: 5 (lower is better)
Translates to: QLWNTHGSGQDPAQLLPRKFLRL*PVIAKT
Trigger: GGTTTTTGCTATTACAGGCAATAACCTGAGGAACTT...TCGAGGAAGGAGTTGAGCAGGATCTTGGCCAGAGCCGTGTGTGTTCCAGAGCTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp CCCTTCATGTCCACGGGGAATAAGACACATTGGGCTCTGGCTCCTAGGGTGAGAATTCTTTGTGCCCTTTaGCAGTCACTGTTAGTTCCA +
Preference number: 5 (lower is better)
Translates to: PFMSTGNKTHWALAPRVRILCAL*QSLLVP
Trigger: TGGAACTAACAGTGACTGCAAAAGGGCACAAAGAAT...TCTCACCCTAGGAGCCAGAGCCCAATGTGTCTTATTCCCCGTGGACATGAAGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGAGGCTTGGCGGGCACTaGCAGGGCTGTCTAATAGCC +
Preference number: 5 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHRRLGGH*QGCLIA
Trigger: GGCTATTAGACAGCCCTGCAAGTGCCCGCCAAGCCT...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp AACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAGACCCACCTCTGTCTCTGTAGATTaGTCCTGGAAATTTCCTATA +
Preference number: 5 (lower is better)
Translates to: NTPDSRSPTQYSSPGRPTSVSVD*SWKFPI
Trigger: TATAGGAAATTTCCAGGACAAATCTACAGAGACAGA...GGTGGGTCTCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AGAAACTTAAATACAAAACAGGGGCGACATGGAGCAGCAATCGGGACAGACCATTTCTTCAGCCAAAGGTaGGCACAGACCACCAAAGTC +
Preference number: 5 (lower is better)
Translates to: RNLNTKQGRHGAAIGTDHFFSQR*AQTTKV
Trigger: GACTTTGGTGGTCTGTGCCAACCTTTGGCTGAAGAA...ATGGTCTGTCCCGATTGCTGCTCCATGTCGCCCCTGTTTTGTATTTAAGTTTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp TCTGCATGTGGGAAAACAAACGACATGATTGGCCAGTTGGCCTGGAGAGAGCTATGCCTAGGAGTGGAATaGCTGATTTGTGTGGTACAT +
Preference number: 5 (lower is better)
Translates to: SACGKTNDMIGQLAWRELCLGVE*LICVVH
Trigger: ATGTACCACACAAATCAGCAATTCCACTCCTAGGCA...TAGCTCTCTCCAGGCCAACTGGCCAATCATGTCGTTTGTTTTCCCACATGCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AACCATAAAACGTGGCATTCCAGAGAAACATCCAGCTTCACCACGGAGGCCACAGAGTTCTGGGAACTTTaGCTTCAGTTTTATGGGATG +
Preference number: 5 (lower is better)
Translates to: NHKTWHSRETSSFTTEATEFWEL*LQFYGM
Trigger: CATCCCATAAAACTGAAGCAAAAGTTCCCAGAACTC...TGTGGCCTCCGTGGTGAAGCTGGATGTTTCTCTGGAATGCCACGTTTTATGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp TGCATCAGAACACTCCAGACAGCCGATCTCCCACTCAGTATTCCTCTCCTGGGAAATAAACAAGTGTTGTaGTCCCCAGTTAAACTTCTG +
Preference number: 5 (lower is better)
Translates to: CIRTLQTADLPLSIPLLGNKQVL*SPVKLL
Trigger: CAGAAGTTTAACTGGGGACAACAACACTTGTTTATT...TCCCAGGAGAGGAATACTGAGTGGGAGATCGGCTGTCTGGAGTGTTCTGATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS-3UTR CAA 90 bp AATTTACTTATTATTCCTGACAGAGGTGATAACGTTGATTCATCAGCACCTTGTTGTCCAGACATCATCTaGCCCCGTACCTCCTGGTGC +
Preference number: 5 (lower is better)
Translates to: NLLIIPDRGDNVDSSAPCCPDII*PRTSWC
Trigger: GCACCAGGAGGTACGGGGCAAGATGATGTCTGGACA...ACAAGGTGCTGATGAATCAACGTTATCACCTCTGTCAGGAATAATAAGTAAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp ATGGCTATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTGCTTTCACGGCCACTTaGGGATGTTTCTTGGGCTTC +
Preference number: 5 (lower is better)
Translates to: MAIRTFFIMRKSNYSLDSAFTAT*GCFLGF
Trigger: GAAGCCCAAGAAACATCCCAAAGTGGCCGTGAAAGC...ACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGATAGCCAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CAA 90 bp ATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACACAAAGAATTCTGCAGAACACAGGTaGGGAAGTAACGGATTTAGA +
Preference number: 5 (lower is better)
Translates to: IMRKSNYSLDSHRADTKNSAEHR*GSNGFR
Trigger: TCTAAATCCGTTACTTCCCAACCTGTGTTCTGCAGA...ATTCTTTGTGTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGGTGGCGTCCCACACTaGATTTCTTATAATATGGAG +
Preference number: 5 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHRGGVPH*ISYNME
Trigger: CTCCATATTATAAGAAATCAAGTGTGGGACGCCACC...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp GGTTGTTTCTGTTCTAAGGACTTTGCATGTGTTAGCTCTGTAAATTCTCATAACATCTCGCTGTACTTTTaGGAGACCAAGAACTGGACG +
Preference number: 5 (lower is better)
Translates to: GCFCSKDFACVSSVNSHNISLYF*ETKNWT
Trigger: CGTCCAGTTCTTGGTCTCCAAAAAGTACAGCGAGAT...GTTATGAGAATTTACAGAGCTAACACATGCAAAGTCCTTAGAACAGAAACAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS-3UTR CAA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGAAAAGAAAGACTGGTaGTGCACACAAAGTTCTCTC +
Preference number: 5 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHREKKDW*CTQSSL
Trigger: GAGAGAACTTTGTGTGCACAACCAGTCTTTCTTTTC...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp ACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGGCAGACATGAGTCCGTTTAATTaGTTCCCAAACTTGCTTATG +
Preference number: 5 (lower is better)
Translates to: TFFIMRKSNYSLDSHRADMSPFN*FPNLLM
Trigger: CATAAGCAAGTTTGGGAACAAATTAAACGGACTCAT...GTCTGCCCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS-3UTR CAA 90 bp TCTTACAGATATAATGAGATCATGCAAGCAAATGCTAACTTAGTTCCCAGCATTGTGACTATTACAGGCTaGTCCCCATATCACCCACTA +
Preference number: 5 (lower is better)
Translates to: SYRYNEIMQANANLVPSIVTITG*SPYHPL
Trigger: TAGTGGGTGATATGGGGACAAGCCTGTAATAGTCAC...AATGCTGGGAACTAAGTTAGCATTTGCTTGCATGATCTCATTATATCTGTAAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000402541.5
CDS-3UTR CAA 90 bp ATGAATGGCTATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGACGGCTCTTTTTGAATTaGTCTGAACAGTTCCTTGGA +
Preference number: 5 (lower is better)
Translates to: MNGYQNILYYEEVQLLPGRLFLN*SEQFLG
Trigger: TCCAAGGAACTGTTCAGACAAATTCAAAAAGAGCCG...TCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGATAGCCATTCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000458740.5
CDS-3UTR CAA 90 bp ATCAGAACATTCTTTATTATGAGGAAGTCCAACTACTCCCTGGATAGTCACAGGAATTTGTTCCCAAACTaGCTTATGCCAGTTATACCT +
Preference number: 5 (lower is better)
Translates to: IRTFFIMRKSNYSLDSHRNLFPN*LMPVIP
Trigger: AGGTATAACTGGCATAAGCAAGTTTGGGAACAAATT...CCTGTGACTATCCAGGGAGTAGTTGGACTTCCTCATAATAAAGAATGTTCTGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS CCA 72 bp TCCAGGCTGCAGAGGCAGCTGTGGACATGCTCCCACTaGGGCACGGCAGCGGGGCCTAGTTCTGGGCCGGGG +
Preference number: 6 (lower is better)
Translates to: SRLQRQLWTCSH*GTAAGPSSGPG
Trigger: CCCCGGCCCAGAACTAGGCCCCGCTGCCGTGCCCCAGTGGGAGCATGTCCACAGCTGCCTCTGCAGCCTGGA
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS GCA 72 bp GCCCACCATCCAGCCAAGGATGTCAGCGAGGCCACCTaGCTCACCAGCCTGGCTGAAGCCTCCAGGCTGCAG +
Preference number: 6 (lower is better)
Translates to: AHHPAKDVSEAT*LTSLAEASRLQ
Trigger: CTGCAGCCTGGAGGCTTCAGCCAGGCTGGTGAGGCAGGTGGCCTCGCTGACATCCTTGGCTGGATGGTGGGC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS TCA 72 bp CTCCCCTCAGAGGAGGCTGGGGCTGAGACTGGGCAATaGGCCGGGCCCTTGGCTCTGTCCAGAACACTCTCA +
Preference number: 6 (lower is better)
Translates to: LPSEEAGAETGQ*AGPLALSRTLS
Trigger: TGAGAGTGTTCTGGACAGAGCCAAGGGCCCGGCTCATTGCCCAGTCTCAGCCCCAGCCTCCTCTGAGGGGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000445102.1
CDS CAA 90 bp CGGGTCACCACCAGGATCTGGTACTCCACGTGTCCAGACATCATCTaGCCCCGTACCTCCTGGTGCTGGGGCACAGTCAGGTCGAGGCCA +
Preference number: 6 (lower is better)
Translates to: RVTTRIWYSTCPDII*PRTSWCWGTVRSRP
Trigger: TGGCCTCGACCTGACTGTGCCCCAGCACCAGGAGGTACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGTGGTGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS TCA 72 bp ACTGGACGACATCCTCGGGCCTGTGCTTGGCCGACTTaGACGCAGCCAGACGGGTCACCACCAGGATCTGGT +
Preference number: 6 (lower is better)
Translates to: TGRHPRACAWPT*TQPDGSPPGSG
Trigger: ACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS CAA 72 bp AACTGGACGACATCCTCGGGCCTGTGCTTGGCCGACTaGAACGCAGCCAGACGGGTCACCACCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: NWTTSSGLCLAD*NAARRVTTRIW
Trigger: CCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS CAA 72 bp GAGACCAAGAACTGGACGACATCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCCAGACGGGTCACCACC +
Preference number: 6 (lower is better)
Translates to: ETKNWTTSSGLC*ADLNAARRVTT
Trigger: GGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
CDS CAA 72 bp GGTACCAAGAACTGGACGACATCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCCAGACGGGTCACCACC +
Preference number: 6 (lower is better)
Translates to: GTKNWTTSSGLC*ADLNAARRVTT
Trigger: GGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS CAA 90 bp GAGACCAAGAACTGGACGACATCCTCGGGCCTGTGCTTGGCCGACTaGAACGCAGCCAGACGGGTCACCACCAGGATCTGGTACTCCACG +
Preference number: 6 (lower is better)
Translates to: ETKNWTTSSGLCLAD*NAARRVTTRIWYST
Trigger: CGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
CDS CAA 90 bp GGTACCAAGAACTGGACGACATCCTCGGGCCTGTGCTTGGCCGACTaGAACGCAGCCAGACGGGTCACCACCAGGATCTGGTACTCCACG +
Preference number: 6 (lower is better)
Translates to: GTKNWTTSSGLCLAD*NAARRVTTRIWYST
Trigger: CGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTACC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS CAA 90 bp TGGGGATCTGGTACCAAGAACTGGACGACATCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCCAGACGGGTCACCACCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: WGSGTKNWTTSSGLC*ADLNAARRVTTRIW
Trigger: CCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTACCAGATCCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS GCA 72 bp TTGGAGACCAAGAACTGGACGACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCAGCCAGACGGGTCACC +
Preference number: 6 (lower is better)
Translates to: LETKNWTTSSGL*LADLNAARRVT
Trigger: GGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
CDS GCA 72 bp TCTGGTACCAAGAACTGGACGACATCCTCGGGCCTGTaGTTGGCCGACTTGAACGCAGCCAGACGGGTCACC +
Preference number: 6 (lower is better)
Translates to: SGTKNWTTSSGL*LADLNAARRVT
Trigger: GGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS CCA 72 bp GACAGAGGAATCTCTGCTGGTGAGCCCTGCAGCCCCTaGGGATCTGGTACCAAGAACTGGACGACATCCTCG +
Preference number: 6 (lower is better)
Translates to: DRGISAGEPCSP*GSGTKNWTTSS
Trigger: CGAGGATGTCGTCCAGTTCTTGGTACCAGATCCCCAGGGGCTGCAGGGCTCACCAGCAGAGATTCCTCTGTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000651498.1
CDS CAA 72 bp ACCAGGATCTGGTACTCCACGTGTCCAGACATCATCTaGCCCCGTACCTCCTGGTGCTGGGGCACAGTCAGG +
Preference number: 6 (lower is better)
Translates to: TRIWYSTCPDII*PRTSWCWGTVR
Trigger: CCTGACTGTGCCCCAGCACCAGGAGGTACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS CAA 90 bp TACTTTTTGGAGACCAAGAACTGGACGACATCCTCGGGCCTGTGCTaGGCCGACTTGAACGCAGCCAGACGGGTCACCACCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: YFLETKNWTTSSGLC*ADLNAARRVTTRIW
Trigger: CCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTCGGCCAAGCACAGGCCCGAGGATGTCGTCCAGTTCTTGGTCTCCAAAAAGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
CDS CAA 90 bp CTGCCTGCCAACTCGGCATCCTTGGAGACACAGCGCAGGATCTCATaGAACACGGCTCTCCTCTCCCGGATGTCAGACTCCCCAACAAAC +
Preference number: 6 (lower is better)
Translates to: LPANSASLETQRRIS*NTALLSRMSDSPTN
Trigger: GTTTGTTGGGGAGTCTGACATCCGGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTTGGCAGGCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000446825.1
CDS TCA 72 bp ACTCGGCATCCTTGGAGACACAGCGCAGGATCTCATTaGACACGGCTCTCCTCTCCCGGATGTCAGACTCCC +
Preference number: 6 (lower is better)
Translates to: TRHPWRHSAGSH*TRLSSPGCQTP
Trigger: GGGAGTCTGACATCCGGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000446825.1
CDS GCA 72 bp GAAGGCCATGGATGGGGTCACACTATGGAGAATGCCTaGTGTGTGAGCCCCCACCTGACAGCCAGACGTTCA +
Preference number: 6 (lower is better)
Translates to: EGHGWGHTMENA*CVSPHLTARRS
Trigger: TGAACGTCTGGCTGTCAGGTGGGGGCTCACACAGCAGGCATTCTCCATAGTGTGACCCCATCCATGGCCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000406618.3
CDS CCA 72 bp GACTTGAACGCAGCCAGACGGGTCACCACCAGGATCTaGTACTCCACGTGTCCAGACATCATCTTGCCCCGT +
Preference number: 6 (lower is better)
Translates to: DLNAARRVTTRI*YSTCPDIILPR
Trigger: ACGGGGCAAGATGATGTCTGGACACGTGGAGTACCAGATCCTGGTGGTGACCCGTCTGGCTGCGTTCAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000651498.1
CDS CAA 72 bp AACTCGGCATCCTTGGAGACACAGCGCAGGATCTCATaGAACACGGCTCTCCTCTCCCGGATGTCAGACTCC +
Preference number: 6 (lower is better)
Translates to: NSASLETQRRIS*NTALLSRMSDS
Trigger: GGAGTCTGACATCCGGGAGAGGAGAGCCGTGTTCAATGAGATCCTGCGCTGTGTCTCCAAGGATGCCGAGTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000304031.8
ENST00000402541.5
ENST00000406618.3
ENST00000446825.1
CDS CCA 72 bp GATTCCAGGGAAGGGGGACGTCATCTCCAGAAAGCCTaGAATACACCAAAGGGGCCCTCTCAACAACAGGAG +
Preference number: 6 (lower is better)
Translates to: DSREGGRHLQKA*NTPKGPSQQQE
Trigger: CTCCTGTTGTTGAGAGGGCCCCTTTGGTGTATTCCAGGCTTTCTGGAGATGACGTCCCCCTTCCCTGGAATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000402541.5