RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HROB (Homo sapiens)

Ensembl gene IDs: ENSG00000125319

Ensembl transcript IDs: ENST00000245382.6, ENST00000319977.8, ENST00000585683.6, ENST00000588073.1, ENST00000588434.1

Found 483 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTaGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAA +
Preference number: 1 (lower is better)
Translates to: GRRGTPKARVTGLSC*LESQSPAGFWCQRQ
Trigger: TTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR GCA 90 bp GGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTaGCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATG +
Preference number: 1 (lower is better)
Translates to: GLSCWLESQSPAGFW*QRQRKAQSEGSAEM
Trigger: CATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAG +
Preference number: 1 (lower is better)
Translates to: TGLSCWLESQSPAGF*CQRQRKAQSEGSAE
Trigger: CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CCA 90 bp TCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCAC +
Preference number: 1 (lower is better)
Translates to: SPLDVTRHMPRAACS*WVVLRWGSLNYWSH
Trigger: GTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR GCA 90 bp GGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTaGCTGCTCATGGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTA +
Preference number: 1 (lower is better)
Translates to: GLLLPLGCDQTHAQS*LLMVGCPALGQSQL
Trigger: TAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CCA 90 bp CCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTaGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCACAGA +
Preference number: 1 (lower is better)
Translates to: PLDVTRHMPRAACSW*VVLRWGSLNYWSHR
Trigger: TCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CCA 90 bp AGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTCCTGCGTTaGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGTCTTCAGGAA +
Preference number: 1 (lower is better)
Translates to: RHMPRAACSWWVVLR*GSLNYWSHRRSLQE
Trigger: TTCCTGAAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CAA 90 bp AGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTaGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCA +
Preference number: 2 (lower is better)
Translates to: RQERDTQGEGDRPFL*AGEPVSGRILVPTA
Trigger: TGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CAA 90 bp CTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACG +
Preference number: 2 (lower is better)
Translates to: LRQERDTQGEGDRPF*LAGEPVSGRILVPT
Trigger: CGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGCTGCCTGCTCATGGTaGGTTGTCCTGCGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: KPERASPLCGGAGRHCCGAACSW*VVLRWG
Trigger: GCCCCAACGCAGGACAACCCACCATGAGCAGGCAGC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTGCCTTTCTTGTTGGCTaGAGAGCCAGTCTCCGGCCG +
Preference number: 2 (lower is better)
Translates to: QRKPERASPLCGGAGRHCAFLVG*RASLRP
Trigger: CGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGC...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR TCA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTCTCCCCCTTGGATGTaGCCAGACACATGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: QRKPERASPLCGGAGRHCSPPWM*PDTCPE
Trigger: CTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGA...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR GCA 90 bp GGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCCGGCCGGATTCTGGTaGCAACGGCAAAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: GGAGRHCCGVAPFISSAVPAGFW*QRQRKA
Trigger: GGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGG...GACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGCCTTTCTTGTTGGCTaGAGAGCCAGTCTCCGGCCG +
Preference number: 2 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVAFLVG*RASLRP
Trigger: CGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCTCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFSPAGF*CQRQRK
Trigger: CTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGA...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CAA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTaGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGG +
Preference number: 2 (lower is better)
Translates to: PGCVHSPIMLAFFSP*DVTRHMPRAACSWW
Trigger: CCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR TCA 90 bp TGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCACCCAAGGCGAGGGTaGCAGGCCTTTCTTGTTGGC +
Preference number: 2 (lower is better)
Translates to: CVEGQAAIVVVWLLSSPQHPRRG*QAFLVG
Trigger: GCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTG...CTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGTGGGTTGTCCTGCGTTaGGGCAGTCTCAACTACTGG +
Preference number: 2 (lower is better)
Translates to: GRRGTPKARVTGLSCWLEWVVLR*GSLNYW
Trigger: CCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCA...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR-3UTR CCA 90 bp GAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGG +
Preference number: 2 (lower is better)
Translates to: EGQAAIVVVWLLSSPQLSRAACS*WVVLRW
Trigger: CCAACGCAGGACAACCCACCATGAGCAGGCAGCTCT...GGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR TCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAATCTCCCCCTTGGATGTaGCCAGACACATGCCCAGAG +
Preference number: 2 (lower is better)
Translates to: LLAGEPVSGRILVPTAKESPPWM*PDTCPE
Trigger: CTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGA...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR TCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTAAGGAAGGCCCAAAGTaGGGGCAGCGCAGAGATGAG +
Preference number: 2 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAKEGPK*GQRRDE
Trigger: CTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTT...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR TCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTCCTCTAAAATTAAGCTaGGGCAGGAGAGGGACACCC +
Preference number: 2 (lower is better)
Translates to: KPERASPLCGGAGRHCCGPLKLS*GRRGTP
Trigger: GGGTGTCCCTCTCCTGCCTCAGCTTAATTTTAGAGG...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR GCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGTCCACTCTCCAATCATaGTGGCCTTCTTCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAESTLQS*WPSSPP
Trigger: AGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGA...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAGCTGCCTGCTCATGGTaGGTTGTCCTGCGTTGGGGC +
Preference number: 2 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETAACSW*VVLRWG
Trigger: GCCCCAACGCAGGACAACCCACCATGAGCAGGCAGC...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTaGCTCCTTTCATCTCCTCAG +
Preference number: 2 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQAAIVVV*LLSSPQ
Trigger: CTGAGGAGATGAAAGGAGCCACACCACAACAATGGC...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CAA 90 bp CAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTCCTGCGTaGGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGTCTTCAGGA +
Preference number: 2 (lower is better)
Translates to: QTHAQSCLLMVGCPA*GQSQLLVPQKKSSG
Trigger: TCCTGAAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR-3UTR TCA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGCCAGGGACTAGGGTATaGAGGGACAAGAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLPGTRV*RDKKTR
Trigger: CCTGGTTTTCTTGTCCCTTCATACCCTAGTCCCTGG...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR GCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAATCCACTCTCCAATCATaGTGGCCTTCTTCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQSTLQS*WPSSPP
Trigger: AGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGA...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGG +
Preference number: 2 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETRAACS*WVVLRW
Trigger: CCAACGCAGGACAACCCACCATGAGCAGGCAGCTCT...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR TCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTCCAGGGACTAGGGTATaGAGGGACAAGAAAACCAGG +
Preference number: 2 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCPGTRV*RDKKTR
Trigger: CCTGGTTTTCTTGTCCCTTCATACCCTAGTCCCTGG...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR GCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCCGGCCGGATTCTGGTaGCAACGGCAAAGGAAGGCC +
Preference number: 2 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLPAGFW*QRQRKA
Trigger: GGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGG...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGTCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAG +
Preference number: 2 (lower is better)
Translates to: GTRKPGPISSKIKLRQERSPAGF*CQRQRK
Trigger: CTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGA...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR GCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGTCCACTCTCCAATCATaGTGGCCTTCTTCTCCCCCT +
Preference number: 2 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLSTLQS*WPSSPP
Trigger: AGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGA...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CCA 72 bp GGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTaGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGC +
Preference number: 3 (lower is better)
Translates to: GTPKARVTGLSC*LESQSPAGFWC
Trigger: GCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR GCA 72 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTaGCTGCTCATGGTGGGTTGTCCTGCGTTGGGGCAG +
Preference number: 3 (lower is better)
Translates to: LPLGCDQTHAQS*LLMVGCPALGQ
Trigger: CTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR GCA 72 bp TGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTaGCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGC +
Preference number: 3 (lower is better)
Translates to: CWLESQSPAGFW*QRQRKAQSEGS
Trigger: GCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp CAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCGTGGGTTGTCCTGCGTaGGGGCAGTCTCAACTACTG +
Preference number: 3 (lower is better)
Translates to: QSPAGFWCQRQRKAQSEGVGCPA*GQSQLL
Trigger: CAGTAGTTGAGACTGCCCCAACGCAGGACAACCCAC...GCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR TCA 72 bp CGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTaGGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGAA +
Preference number: 3 (lower is better)
Translates to: RILVPTAKEGPK*GQRRDEGALRE
Trigger: TTCCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CCA 72 bp TCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGC +
Preference number: 3 (lower is better)
Translates to: SCWLESQSPAGF*CQRQRKAQSEG
Trigger: GCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp GAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: EGQAAIVVVWLLSSPQLSGDRPF*LAGEPV
Trigger: GACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACC...GGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CCA 72 bp GTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTaGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGG +
Preference number: 3 (lower is better)
Translates to: VTRHMPRAACSW*VVLRWGSLNYW
Trigger: CCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR-3UTR CAA 90 bp GAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCGCCTTCTTCTCCCCCTaGGATGTGACCAGACACATG +
Preference number: 3 (lower is better)
Translates to: EGQAAIVVVWLLSSPQLSAFFSP*DVTRHM
Trigger: CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGC...GGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGGACAGGCCTTTCTTGTaGGCTGGAGAGCCAGTCTCC +
Preference number: 3 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLDRPFL*AGEPVS
Trigger: GGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTC +
Preference number: 3 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLGDRPF*LAGEPV
Trigger: GACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACC...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CCA 72 bp CCCAGAGCTGCCTGCTCATGGTGGGTTGTCCTGCGTTaGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGT +
Preference number: 3 (lower is better)
Translates to: PRAACSWWVVLR*GSLNYWSHRRS
Trigger: ACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CCA 72 bp GATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTAC +
Preference number: 3 (lower is better)
Translates to: DVTRHMPRAACS*WVVLRWGSLNY
Trigger: GTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CCA 72 bp GCCACACCTCTGTCCTGCACCTGGGAACCTTGGGCATaGATGAGCAGAGCAACCACAGGTCTGAAGAGACAA +
Preference number: 3 (lower is better)
Translates to: ATPLSCTWEPWA*MSRATTGLKRQ
Trigger: TTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAGAGGTGTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTCCTGCTCATGGTGGGTaGTCCTGCGTTGGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPPAHGG*SCVGAV
Trigger: GACTGCCCCAACGCAGGACAACCCACCATGAGCAGG...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCCTGCTCATGGTGGGTaGTCCTGCGTTGGGGCAGTC +
Preference number: 3 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKPAHGG*SCVGAV
Trigger: GACTGCCCCAACGCAGGACAACCCACCATGAGCAGG...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR-3UTR CAA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGGCCTTCTTCTCCCCCTaGGATGTGACCAGACACATG +
Preference number: 3 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKAFFSP*DVTRHM
Trigger: CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGC...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGCATAGCGACGGCGGGTaGGCCTCGGCGGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGHSDGG*ASAGRL
Trigger: CAACCTCCCCGCCGAGGCCCACCCGCCGTCGCTATG...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCATAGCGACGGCGGGTaGGCCTCGGCGGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRHSDGG*ASAGRL
Trigger: CAACCTCCCCGCCGAGGCCCACCCGCCGTCGCTATG...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGTCCGGCTGGCAGCAGTaGCTAGCTGCACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGSGWQQ*LAAPGG
Trigger: ACCACCTGGTGCAGCTAGTCACTGCTGCCAGCCGGA...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCGAGGGATGGGTGGGCTaGTGGGGTGTCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: GGAGRHCCGVAPFISSAVEGWVG*WGVRLA
Trigger: TGCCAGCCGGACACCCCAGCAGCCCACCCATCCCTC...GACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTGAGGGATGGGTGGGCTaGTGGGGTGTCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: LPLGCDQTHAQSCLLMVGEGWVG*WGVRLA
Trigger: TGCCAGCCGGACACCCCAGCAGCCCACCCATCCCTC...ACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCCTGTGCACCGTCCCCTaGATCTCTCCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQALCTVP*ISPVGS
Trigger: GGACCCCACGGGAGAGATGCAGGGGACGGTGCACAG...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTTCCGGCTGGCAGCAGTaGCTAGCTGCACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVSGWQQ*LAAPGG
Trigger: ACCACCTGGTGCAGCTAGTCACTGCTGCCAGCCGGA...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTGAGGGATGGGTGGGCTaGTGGGGTGTCCGGCTGGCA +
Preference number: 4 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCEGWVG*WGVRLA
Trigger: TGCCAGCCGGACACCCCAGCAGCCCACCCATCCCTC...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTCTGTGCACCGTCCCCTaGATCTCTCCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: LPLGCDQTHAQSCLLMVGLCTVP*ISPVGS
Trigger: GGACCCCACGGGAGAGATGCAGGGGACGGTGCACAG...ACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGACTCCGAGGGACAGTaGTTCCGGGCTGGGGTCAGA +
Preference number: 4 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQADSEGQ*FRAGVR
Trigger: TCTGACCCCAGCCCGGAAGCACTGTCCCTCGGAGTC...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCCAGAGCTGCCTGCTCATGGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTAGAGTCGCCGGGGCCTTaGACACGACCCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: AQSCLLMVGCPALGQSQLESPGP*TRPRWK
Trigger: CTTCCACCTGGGTCGTGTCCAAGGCCCCGGCGACTC...TAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR CCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCGAAGACGCCGCCACTaGGGCGTCTCCGCCTTCTTA +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRRRRRH*GVSAFL
Trigger: TAAGAAGGCGGAGACGCCCCAGTGGCGGCGTCTTCG...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS-3UTR TCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGCTCCCGTGGGGTCCTTaGAAACCACACTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAELPWGP*KPHWRP
Trigger: TGGACGCCAGTGTGGTTTTCAAGGACCCCACGGGAG...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTCCCGTGGGGTCCTTaGAAACCACACTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRILPWGP*KPHWRP
Trigger: TGGACGCCAGTGTGGTTTTCAAGGACCCCACGGGAG...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCACCCAAGGCGAGGGTaGCAGGCCTTTCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGHPRRG*QAFLVG
Trigger: GCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTG...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCACCCAAGGCGAGGGTaGCAGGCCTTTCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRIHPRRG*QAFLVG
Trigger: GCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTG...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGGGGCGCGGAAACCATaGTGTCCTCCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVGARKP*CPPDFS
Trigger: GGAGAAGTCTGGAGGACATCATGGTTTCCGCGCCCC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGGGGCGCGGAAACCATaGTGTCCTCCAGACTTCTCC +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGGARKP*CPPDFS
Trigger: GGAGAAGTCTGGAGGACATCATGGTTTCCGCGCCCC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGCAGCCTGGAGGACTGTaGCTGCACAGTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAEQPGGL*LHSLLW
Trigger: CCACAGGAGACTGTGCAGGCACAGTCCTCCAGGCTG...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCAGCCTGGAGGACTGTaGCTGCACAGTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRIQPGGL*LHSLLW
Trigger: CCACAGGAGACTGTGCAGGCACAGTCCTCCAGGCTG...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCACTGAACCCTCCCGCTaGTGGGCAGGCAGGATTGGT +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGTEPSR*WAGRIG
Trigger: ACCAATCCTGCCTGCCCAGCAGCGGGAGGGTTCAGT...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGCTGTGCACCGTCCCCTaGATCTCTCCCGTGGGGTCC +
Preference number: 4 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVLCTVP*ISPVGS
Trigger: GGACCCCACGGGAGAGATGCAGGGGACGGTGCACAG...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTAAGCTGCTTCAGGGCTaGCTGCTTGCGCAGCACCAT +
Preference number: 4 (lower is better)
Translates to: QRKPERASPLCGGAGRHCKLLQG*LLAQHH
Trigger: ATGGTGCTGCGCAAGCAGGCAGCCCTGAAGCAGCTT...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS-3UTR CCA 90 bp GGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGGACGGCTGTCAGCACTaGGCGTGCTGGAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: GFWCQRQRKAQSEGSAEMDGCQH*ACWRQG
Trigger: TCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTC...CATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGAACCCTCCCGCTGCTaGGCAGGCAGGATTGGTATG +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGEPSRC*AGRIGM
Trigger: CATACCAATCCTGCCTGCCCAGCAGCGGGAGGGTTC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTACCCGCTTTGTGGATaGCAGGCACAGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: QRKPERASPLCGGAGRHCYPLCG*QAQAPS
Trigger: AGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTA...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTTCCCTGGGGACCTTTTaGGGTACCAACAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: ERASPLCGGAGRHCCGVASLGTF*GTNRRP
Trigger: GGGTCTCCTGTTGGTACCCCAAAAGGTCCCCAGGGA...AGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGGAAACGGCGAGTTTTaGCTCGGGTGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGGNGEF*LGWRDG
Trigger: CCCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGAGGCAGGATCCCAGCTaGGCCAGGGAAACGGCGAGT +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGERQDPS*ARETAS
Trigger: ACTCGCCGTTTCCCTGGCCCAGCTGGGATCCTGCCT...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTGGGGAAGGGCTGAGATaGCTTGAGGAAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: ERASPLCGGAGRHCCGVAGEGLR*LEEAPI
Trigger: GATGGGAGCTTCCTCAAGCCATCTCAGCCCTTCCCC...AGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CAA 72 bp AGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTaGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTG +
Preference number: 4 (lower is better)
Translates to: RDTQGEGDRPFL*AGEPVSGRILV
Trigger: CACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
3UTR CAA 72 bp GAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTG +
Preference number: 4 (lower is better)
Translates to: ERDTQGEGDRPF*LAGEPVSGRIL
Trigger: CAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTGTTGGCTCTCAAAGGTaGGTAGGGGGTGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: QRKPERASPLCGGAGRHCVGSQR*VGGVRL
Trigger: CAGCCTTACACCCCCTACTCACCTTTGAGAGCCAAC...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGCATCCTGGGCGGACATaGTACCCGCTTTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAEHPGRT*YPLCGW
Trigger: CCATCCACAAAGCGGGTATCATGTCCGCCCAGGATG...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGGCACCAGGTGGTTGGTaGCTATGGGTGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRAPGGW*LWVSAE
Trigger: CTCTGCAGACACCCATAGTCACCAACCACCTGGTGC...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGTCTCCCCCTTGGATGTaGCCAGACACATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: GRRGTPKARVTGLSCWLESPPWM*PDTCPE
Trigger: CTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGA...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGTCTCCCCCTTGGATGTaGCCAGACACATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAESPPWM*PDTCPE
Trigger: CTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGA...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAAGGAAGGCCCAAAGTaGGGGCAGCGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: GRRGTPKARVTGLSCWLEKEGPK*GQRRDE
Trigger: CTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTT...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGTCCTTGGGGAAGGGCTaGGATGGCTTGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAESLGKG*DGLRKL
Trigger: GAGCTTCCTCAAGCCATCTCAGCCCTTCCCCAAGGA...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGGGTTCTGTGCTGTTCTaGAGCCTTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGGSVLF*SLPRAL
Trigger: CAAAGCCCGAGGAAGGCTTCAGAACAGCACAGAACC...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCCTGGAGGACTGTGCCTaGACAGTCTCCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQALEDCA*TVSCGL
Trigger: TAGGCCACAGGAGACTGTGCAGGCACAGTCCTCCAG...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCGGGGAGCTGCTCCTATaGATGATGGACGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGGELLL*MMDGCQ
Trigger: CTGACAGCCGTCCATCATGCATAGGAGCAGCTCCCC...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCGTGACTATGGGTGTCTaGAGAGCTCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGVTMGV*RAPWGP
Trigger: AGGTCCCCAGGGAGCTCTGCAGACACCCATAGTCAC...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTTCCAGCAGCAACCTGTaGACCGTCCCCTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGSSSNL*TVPCIS
Trigger: AGAGATGCAGGGGACGGTGCACAGGTTGCTGCTGGA...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGACACATGCCCAGAGCTaGCTGCTCATGGTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQTHAQS*LLMVGC
Trigger: ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGT...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGCCGGCCGGATTCTGGTaGCAACGGCAAAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLPAGFW*QRQRKA
Trigger: GGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGG...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGCCGGCCGGATTCTGGTaGCAACGGCAAAGGAAGGCC +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVPAGFW*QRQRKA
Trigger: GGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGG...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCGCCACACCTCTGTCCTaGACCTGGGAACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: GGAGRHCCGVAPFISSAVATPLS*TWEPWA
Trigger: TGCCCAAGGTTCCCAGGTGCAGGACAGAGGTGTGGC...GACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCTGCTTCAGGGCTGCCTaGTTGCGCAGCACCATGACA +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFCFRAA*LRSTMT
Trigger: TGTCATGGTGCTGCGCAAGCAGGCAGCCCTGAAGCA...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS-3UTR CCA 90 bp CCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATCATAGCGACGGCGGGTaGGCCTCGGCGGGGAGGTTG +
Preference number: 4 (lower is better)
Translates to: PLSNHAGLLLPLGCDQTHHSDGG*ASAGRL
Trigger: CAACCTCCCCGCCGAGGCCCACCCGCCGTCGCTATG...ATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTAACAGCAGCAGCCTaGAGGACTGTGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGVTAAA*RTVPAQ
Trigger: CTGTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTAC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCCTGGGCAGGCAGGATTaGTATGGCCTCACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQALGRQD*YGLTAD
Trigger: GTCAGCAGTGAGGCCATACCAATCCTGCCTGCCCAG...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTTACCCGCTTTGTGGATaGCAGGCACAGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRIYPLCG*QAQAPS
Trigger: AGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTA...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTTACCCGCTTTGTGGATaGCAGGCACAGGCCCCTTCT +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGYPLCG*QAQAPS
Trigger: AGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTA...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCATGATACCCGCTTTGTaGATGGCAGGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGMIPAL*MAGTGP
Trigger: GGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCAT...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTATGATACCCGCTTTGTaGATGGCAGGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGMIPAL*MAGTGP
Trigger: GGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCAT...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGTCCCTGGGGACCTTTTaGGGTACCAACAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRSLGTF*GTNRRP
Trigger: GGGTCTCCTGTTGGTACCCCAAAAGGTCCCCAGGGA...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGTCCCTGGGGACCTTTTaGGGTACCAACAGGAGACCC +
Preference number: 4 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRSLGTF*GTNRRP
Trigger: GGGTCTCCTGTTGGTACCCCAAAAGGTCCCCAGGGA...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTCTGCAGAGCTCCCTaGGGACCTTTTGGGGTACCA +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVVCRAP*GPFGVP
Trigger: TGGTACCCCAAAAGGTCCCCAGGGAGCTCTGCAGAC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTAGGCAGGATCCCAGCTaGGCCAGGGAAACGGCGAGT +
Preference number: 4 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCRQDPS*ARETAS
Trigger: ACTCGCCGTTTCCCTGGCCCAGCTGGGATCCTGCCT...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTAGGCAGGATCCCAGCTaGGCCAGGGAAACGGCGAGT +
Preference number: 4 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCRQDPS*ARETAS
Trigger: ACTCGCCGTTTCCCTGGCCCAGCTGGGATCCTGCCT...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAERAACS*WVVLRW
Trigger: CCAACGCAGGACAACCCACCATGAGCAGGCAGCTCT...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGRAACS*WVVLRW
Trigger: CCAACGCAGGACAACCCACCATGAGCAGGCAGCTCT...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCTCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGSPAGF*CQRQRK
Trigger: CTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGA...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGTCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: GRRGTPKARVTGLSCWLESPAGF*CQRQRK
Trigger: CTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGA...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAATGCTTCTCCCCTGTGTaGAGGGGCAGGCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQCFSPV*RGRPPL
Trigger: CAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCA...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTACAGTGCTTCCGGGCTaGGGTCAGAGGGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVTVLPG*GQRDES
Trigger: AGACTCATCCCTCTGACCCCAGCCCGGAAGCACTGT...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGTTAGCCAGAGCACCATaGGTTGGAGTTTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRLARAP*VGVWGA
Trigger: CGCGCCCCAAACTCCAACCCATGGTGCTCTGGCTAA...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
3UTR CAA 72 bp CCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTaGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCC +
Preference number: 4 (lower is better)
Translates to: PDTCPELPAHGG*SCVGAVSTTGP
Trigger: GGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CAA 72 bp GCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATaGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGT +
Preference number: 4 (lower is better)
Translates to: ACFSPVWRGRPP*LWCGSFHLLSC
Trigger: ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGGTATGGCCTCACTGCTaGCTCCACATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRVWPHC*LHIPAP
Trigger: TGGAGCTGGAATGTGGAGTCAGCAGTGAGGCCATAC...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCGTATGGCCTCACTGCTaGCTCCACATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGVWPHC*LHIPAP
Trigger: TGGAGCTGGAATGTGGAGTCAGCAGTGAGGCCATAC...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGGTATGGCCTCACTGCTaGCTCCACATTCCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GRRGTPKARVTGLSCWLEVWPHC*LHIPAP
Trigger: TGGAGCTGGAATGTGGAGTCAGCAGTGAGGCCATAC...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGGCACCAGGTGGTTGGTaGCTATGGGTGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGEAPGGW*LWVSAE
Trigger: CTCTGCAGACACCCATAGTCACCAACCACCTGGTGC...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCTTCAGCAGCAGCACTaGGCCAGGCTTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGLQQQH*ARLQLI
Trigger: AATGAGCTGAAGCCTGGCTCAGTGCTGCTGCTGAAG...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTTCAGCAGCAGCACTaGGCCAGGCTTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRILQQQH*ARLQLI
Trigger: AATGAGCTGAAGCCTGGCTCAGTGCTGCTGCTGAAG...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTTGGGGAAGGGCTaGGATGGCTTGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFILGKG*DGLRKL
Trigger: GAGCTTCCTCAAGCCATCTCAGCCCTTCCCCAAGAT...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR TCA 90 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTCTCCCCCTTGGATGTaGCCAGACACATGCCCAGAG +
Preference number: 4 (lower is better)
Translates to: LPLGCDQTHAQSCLLMVGSPPWM*PDTCPE
Trigger: CTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGA...ACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTAACCTTGGGCATGGATaGGCAGAGCAACCACAGGTC +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRINLGHG*AEQPQV
Trigger: GACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTT...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCTGGAGGACTGTGCCTaGACAGTCTCCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: GGAGRHCCGVAPFISSAVLEDCA*TVSCGL
Trigger: TAGGCCACAGGAGACTGTGCAGGCACAGTCCTCCAG...GACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCACATTCCAGCTCCATaGCAGGCTCCTCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGHIPAP*QAPPTP
Trigger: TGGAGTTGGAGGAGCCTGGCATGGAGCTGGAATGTG...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCCACATTCCAGCTCCATaGCAGGCTCCTCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQAHIPAP*QAPPTP
Trigger: TGGAGTTGGAGGAGCCTGGCATGGAGCTGGAATGTG...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCACATTCCAGCTCCATaGCAGGCTCCTCCAACTCCA +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRIHIPAP*QAPPTP
Trigger: TGGAGTTGGAGGAGCCTGGCATGGAGCTGGAATGTG...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCCATGGTGGGTTGTCCTaGGTTGGGGCAGTCTCAACT +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFHGGLS*VGAVST
Trigger: AGTTGAGACTGCCCCAACGCAGGACAACCCACCATG...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTTGTTCCTAGGAAGCTaGTTCAGGGCTGCCTGCTTG +
Preference number: 4 (lower is better)
Translates to: QRKPERASPLCGGAGRHCLFLGS*FRAACL
Trigger: CAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAA...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS-3UTR CCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTTGGACACGACCCAGGTaGAAGTCTCGGACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAWTRPR*KSRTPR
Trigger: CCTCGGAGTCCGAGACTTCCACCTGGGTCGTGTCCA...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAATGGACACGACCCAGGTaGAAGTCTCGGACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEWTRPR*KSRTPR
Trigger: CCTCGGAGTCCGAGACTTCCACCTGGGTCGTGTCCA...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTGTAACAGCAGCAGCCTaGAGGACTGTGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: LPLGCDQTHAQSCLLMVGVTAAA*RTVPAQ
Trigger: CTGTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTAC...ACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCACTGGGCAGGCAGGATTaGTATGGCCTCACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: DRPFLLAGEPVSGRILVPLGRQD*YGLTAD
Trigger: GTCAGCAGTGAGGCCATACCAATCCTGCCTGCCCAG...TGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGTCTAGAGACTCATCCTaGGCGGACATGATACCCGCT +
Preference number: 4 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGSRDSS*ADMIPA
Trigger: AGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGA...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGCAACAGGAGACCCAATaGAAGACACTGGAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGQQETQ*KTLELA
Trigger: CGCAAGCTCCAGTGTCTTCCATTGGGTCTCCTGTTG...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCTTTCTTGTTGGCTaGAGAGCCAGTCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: KRQSRGSLSVLLPCVEGQAFLVG*RASLRP
Trigger: CGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGC...CTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGGCCTTTCTTGTTGGCTaGAGAGCCAGTCTCCGGCCG +
Preference number: 4 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLAFLVG*RASLRP
Trigger: CGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGC...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTACAGGCCTTTCTTGTTaGCTGGAGAGCCAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRITGLSC*LESQSP
Trigger: CGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGTTAGCCAGAGCACCATaGGTTGGAGTTTGGGGCGCG +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGELARAP*VGVWGA
Trigger: CGCGCCCCAAACTCCAACCCATGGTGCTCTGGCTAA...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTCTAGCGTGGATTTCATaGTCAGCCAGGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCLAWIS*SARALA
Trigger: GGCGAGGGCCCTGGCTGACCATGAAATCCACGCTAG...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGCTAGCGTGGATTTCATaGTCAGCCAGGGCCCTCGCC +
Preference number: 4 (lower is better)
Translates to: GFWCQRQRKAQSEGSAEMLAWIS*SARALA
Trigger: GGCGAGGGCCCTGGCTGACCATGAAATCCACGCTAG...CATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
3UTR CAA 72 bp GCCCAGAGCTGCCTGCTCATGGTGGGTTGTCCTGCGTaGGGGCAGTCTCAACTACTGGTCCCACAGAAGAAG +
Preference number: 4 (lower is better)
Translates to: AQSCLLMVGCPA*GQSQLLVPQKK
Trigger: CTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGCAGCTCTGGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
3UTR CAA 72 bp TGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTaGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: CFSPVWRGRPPL*WCGSFHLLSCP
Trigger: TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGGTTGGCTCTCAAAGGTaGGTAGGGGGTGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: SCWLESQSPAGFWCQRQRVGSQR*VGGVRL
Trigger: CAGCCTTACACCCCCTACTCACCTTTGAGAGCCAAC...CCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCTCCCAGTGGAGTTGCTaGGTGGGAACTGTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: RQSRGSLSVLLPCVEGQASQWSC*VGTVKA
Trigger: TGCCTTAACAGTTCCCACTCAGCAACTCCACTGGGA...GGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTTCCCAGTGGAGTTGCTaGGTGGGAACTGTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGSQWSC*VGTVKA
Trigger: TGCCTTAACAGTTCCCACTCAGCAACTCCACTGGGA...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGGGAGTAGAACAGCTTaGGTTGGGAGTTCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGGSRTA*VGSSRS
Trigger: AGACCTCGAACTCCCAACTCAAGCTGTTCTACTCCC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCGGGAGTAGAACAGCTTaGGTTGGGAGTTCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGGSRTA*VGSSRS
Trigger: AGACCTCGAACTCCCAACTCAAGCTGTTCTACTCCC...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAAAAGCAGAGGAAGCCTaGGCGTGCTTCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEKAEEA*ACFSPV
Trigger: CACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTT...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTAAAGCAGAGGAAGCCTaGGCGTGCTTCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAKAEEA*ACFSPV
Trigger: CACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTT...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAATCCTTGGGGAAGGGCTaGGATGGCTTGAGGAAGCTC +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKESLGKG*DGLRKL
Trigger: GAGCTTCCTCAAGCCATCTCAGCCCTTCCCCAAGGA...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTATGCTGGAAGCTCCCTaGATCCTTGGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCMLEAP*ILGEGL
Trigger: CAGCCCTTCCCCAAGGATTCAGGGAGCTTCCAGCAT...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCACTGGAGGACTGTGCCTaGACAGTCTCCTGTGGCCTA +
Preference number: 4 (lower is better)
Translates to: RGRPPLLWCGSFHLLSCPLEDCA*TVSCGL
Trigger: TAGGCCACAGGAGACTGTGCAGGCACAGTCCTCCAG...TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGGGAGCTGCTCCTATaGATGATGGACGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVGELLL*MMDGCQ
Trigger: CTGACAGCCGTCCATCATGCATAGGAGCAGCTCCCC...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAAGCCACCAACTTGCTaGTGTTGGCTCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQKPPTC*CWLSKV
Trigger: CACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTT...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTTTGGAGAGGCTGAAGTaGTTGAACAGGGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVLERLK*LNRGAL
Trigger: CAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAA...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGGTGACTATGGGTGTCTaGAGAGCTCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVVTMGV*RAPWGP
Trigger: AGGTCCCCAGGGAGCTCTGCAGACACCCATAGTCAC...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGGTGACTATGGGTGTCTaGAGAGCTCCCTGGGGACCT +
Preference number: 4 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLVTMGV*RAPWGP
Trigger: AGGTCCCCAGGGAGCTCTGCAGACACCCATAGTCAC...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGTCCAGCAGCAACCTGTaGACCGTCCCCTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: GFWCQRQRKAQSEGSAEMSSSNL*TVPCIS
Trigger: AGAGATGCAGGGGACGGTGCACAGGTTGCTGCTGGA...CATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGTCCAGCAGCAACCTGTaGACCGTCCCCTGCATCTCT +
Preference number: 4 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVSSSNL*TVPCIS
Trigger: AGAGATGCAGGGGACGGTGCACAGGTTGCTGCTGGA...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCACATGGTGGGTTGTCCTaGGTTGGGGCAGTCTCAACT +
Preference number: 4 (lower is better)
Translates to: DRPFLLAGEPVSGRILVPHGGLS*VGAVST
Trigger: AGTTGAGACTGCCCCAACGCAGGACAACCCACCATG...TGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCTCCACTCTCCAATCATaGTGGCCTTCTTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFSTLQS*WPSSPP
Trigger: AGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGA...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAGAGTCGCCGGGGCCTTaGACACGACCCAGGTGGAAG +
Preference number: 4 (lower is better)
Translates to: TWEPWAWMSRATTGLKRQESPGP*TRPRWK
Trigger: CTTCCACCTGGGTCGTGTCCAAGGCCCCGGCGACTC...TTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTCTGCACAGTCTCCTGTaGCCTAGAAGAGACAGGTCT +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVLHSLL*PRRDRS
Trigger: AGACCTGTCTCTTCTAGGCCACAGGAGACTGTGCAG...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCTGCACAGTCTCCTGTaGCCTAGAAGAGACAGGTCT +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGLHSLL*PRRDRS
Trigger: AGACCTGTCTCTTCTAGGCCACAGGAGACTGTGCAG...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCCTGCACAGTCTCCTGTaGCCTAGAAGAGACAGGTCT +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFLHSLL*PRRDRS
Trigger: AGACCTGTCTCTTCTAGGCCACAGGAGACTGTGCAG...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGCCAACTTGCTGCTGTTaGCTCTCAAAGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQPTCCC*LSKVSR
Trigger: CCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGG...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCGGCACAGGCCCCTTCTaGCAAGATCCACTCAGATCA +
Preference number: 4 (lower is better)
Translates to: GGAGRHCCGVAPFISSAVGTGPF*QDPLRS
Trigger: TGATCTGAGTGGATCTTGCCAGAAGGGGCCTGTGCC...GACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGGGCACAGGCCCCTTCTaGCAAGATCCACTCAGATCA +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGEGTGPF*QDPLRS
Trigger: TGATCTGAGTGGATCTTGCCAGAAGGGGCCTGTGCC...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGATGATACCCGCTTTGTaGATGGCAGGCACAGGCCCC +
Preference number: 4 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVMIPAL*MAGTGP
Trigger: GGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCAT...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTTCTAGAGACTCATCCTaGGCGGACATGATACCCGCT +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGSRDSS*ADMIPA
Trigger: AGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGA...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTTCTAGAGACTCATCCTaGGCGGACATGATACCCGCT +
Preference number: 4 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRISRDSS*ADMIPA
Trigger: AGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGA...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCAACAGGAGACCCAATaGAAGACACTGGAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGQQETQ*KTLELA
Trigger: CGCAAGCTCCAGTGTCTTCCATTGGGTCTCCTGTTG...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGCTGCCTGCTCATGGTaGGTTGTCCTGCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCAACSW*VVLRWG
Trigger: GCCCCAACGCAGGACAACCCACCATGAGCAGGCAGC...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGACAGGCCTTTCTTGTTaGCTGGAGAGCCAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGETGLSC*LESQSP
Trigger: CGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCTGGGAACCTTGGGCATaGATGAGCAGAGCAACCACA +
Preference number: 4 (lower is better)
Translates to: QSPAGFWCQRQRKAQSEGWEPWA*MSRATT
Trigger: TGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCA...GCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCTGGGAACCTTGGGCATaGATGAGCAGAGCAACCACA +
Preference number: 4 (lower is better)
Translates to: ETKQRKPERASPLCGGAGWEPWA*MSRATT
Trigger: TGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCA...GCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCTGGGAACCTTGGGCATaGATGAGCAGAGCAACCACA +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGWEPWA*MSRATT
Trigger: TGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCA...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCATGCACCTGGGAACCTTaGGCATGGATGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: DRPFLLAGEPVSGRILVPCTWEP*AWMSRA
Trigger: TGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCA...TGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAACAGAGCACCATGGGTTaGAGTTTGGGGCGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEQSTMG*SLGRGN
Trigger: GTTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTG...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGCAGCCACATCATGCTaGAAGCTCCCTGAATCCTTG +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVAATSC*KLPESL
Trigger: CAAGGATTCAGGGAGCTTCCAGCATGATGTGGCTGC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCTCCCAGTGGAGTTGCTaGGTGGGAACTGTTAAGGCA +
Preference number: 4 (lower is better)
Translates to: EGQAAIVVVWLLSSPQLSSQWSC*VGTVKA
Trigger: TGCCTTAACAGTTCCCACTCAGCAACTCCACTGGGA...GGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCGGGAGTAGAACAGCTTaGGTTGGGAGTTCGAGGTCT +
Preference number: 4 (lower is better)
Translates to: EGQAAIVVVWLLSSPQLSGSRTA*VGSSRS
Trigger: AGACCTCGAACTCCCAACTCAAGCTGTTCTACTCCC...GGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGTCGCACCAGGTGGTTGGTaGCTATGGGTGTCTGCAGAG +
Preference number: 4 (lower is better)
Translates to: GGLSCVGAVSTTGPTEEVAPGGW*LWVSAE
Trigger: CTCTGCAGACACCCATAGTCACCAACCACCTGGTGC...GACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR TCA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCTTCAGCAGCAGCACTaGGCCAGGCTTCAGCTCATT +
Preference number: 4 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCLQQQH*ARLQLI
Trigger: AATGAGCTGAAGCCTGGCTCAGTGCTGCTGCTGAAG...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCACCAGGGACTAGGGTATaGAGGGACAAGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: DRPFLLAGEPVSGRILVPPGTRV*RDKKTR
Trigger: CCTGGTTTTCTTGTCCCTTCATACCCTAGTCCCTGG...TGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGAACCTTGGGCATGGATaGGCAGAGCAACCACAGGTC +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVNLGHG*AEQPQV
Trigger: GACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTT...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGACAGCAAACAGCTTCTaGAAACTGCACGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRTANSF*KLHAIA
Trigger: CGCTATGGCGTGCAGTTTGCAGAAGCTGTTTGCTGT...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCACAGCAAACAGCTTCTaGAAACTGCACGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: QSPAGFWCQRQRKAQSEGTANSF*KLHAIA
Trigger: CGCTATGGCGTGCAGTTTGCAGAAGCTGTTTGCTGT...GCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTACTGAACCCTCCCGCTaGTGGGCAGGCAGGATTGGT +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCTEPSR*WAGRIG
Trigger: ACCAATCCTGCCTGCCCAGCAGCGGGAGGGTTCAGT...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGAAGACACTGGAGCTTaGGGTTGTAAGGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVEDTGA*GCKGIR
Trigger: TCGGATACCCTTACAACCGCAAGCTCCAGTGTCTTC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTACACATGCCCAGAGCTaGCTGCTCATGGTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCTHAQS*LLMVGC
Trigger: ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGT...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAACACATGCCCAGAGCTaGCTGCTCATGGTGGGTTGT +
Preference number: 4 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQTHAQS*LLMVGC
Trigger: ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGT...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCGCCACACCTCTGTCCTaGACCTGGGAACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFATPLS*TWEPWA
Trigger: TGCCCAAGGTTCCCAGGTGCAGGACAGAGGTGTGGC...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTTTTGCAGCCACATCATaGTGGAAGCTCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGFAATS*WKLPES
Trigger: GGATTCAGGGAGCTTCCAGCATGATGTGGCTGCAAA...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTTTGTTCCTAGGAAGCTaGTTCAGGGCTGCCTTGCGC +
Preference number: 4 (lower is better)
Translates to: CGGAGRHCCGVAPFISSALFLGS*FRAALR
Trigger: GCGCAAGGCAGCCCTGAAGCAGCTTCCTAGGAACAA...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585683.6
CDS-3UTR CCA 90 bp TGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGGGCACAGGCCCCTTCTaGCAAGATCCACTCAGATCA +
Preference number: 4 (lower is better)
Translates to: CVEGQAAIVVVWLLSSPQGTGPF*QDPLRS
Trigger: TGATCTGAGTGGATCTTGCCAGAAGGGGCCTGTGCC...CTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGAGTGGAGTTGCTGAGTaGGAACTGTTAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGSGVAE*ELLRQL
Trigger: CAACTGCCTTAACAGTTCCCACTCAGCAACTCCACT...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGTGGGAGTTCGAGGTCTaGGTAAATGAGCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRWEFEV*VNELCH
Trigger: GTGGCAAAGCTCATTTACCCAGACCTCGAACTCCCA...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTTGGGAGTTCGAGGTCTaGGTAAATGAGCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: KPERASPLCGGAGRHCCGWEFEV*VNELCH
Trigger: GTGGCAAAGCTCATTTACCCAGACCTCGAACTCCCA...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGCTTCAGCTCATTCTaGCACGTCTCCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVGFSSF*HVSSSN
Trigger: GTTGCTGCTGGAGACGTGCCAGAATGAGCTGAAGCC...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCTTCAGCTCATTCTaGCACGTCTCCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEGFSSF*HVSSSN
Trigger: GTTGCTGCTGGAGACGTGCCAGAATGAGCTGAAGCC...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTTGGGTTGTCCTGCGTTaGGGCAGTCTCAACTACTGG +
Preference number: 4 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAWVVLR*GSLNYW
Trigger: CCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCA...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACAGCTGCCTGCTCATGGTaGGTTGTCCTGCGTTGGGGC +
Preference number: 4 (lower is better)
Translates to: CPLSNHAGLLLPLGCDQTAACSW*VVLRWG
Trigger: GCCCCAACGCAGGACAACCCACCATGAGCAGGCAGC...TGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGCTCATGGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCACAGATCTCCGGCCGGATTCTaGTGCCAACGGCAAAGGAAG +
Preference number: 4 (lower is better)
Translates to: CSWWVVLRWGSLNYWSHRSPAGF*CQRQRK
Trigger: CTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGA...TCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGCCATTGTTGTGGTGTaGCTCCTTTCATCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVAIVVV*LLSSPQ
Trigger: CTGAGGAGATGAAAGGAGCCACACCACAACAATGGC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCCATTGTTGTGGTGTaGCTCCTTTCATCTCCTCAG +
Preference number: 4 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRAIVVV*LLSSPQ
Trigger: CTGAGGAGATGAAAGGAGCCACACCACAACAATGGC...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGTGCACCTGGGAACCTTaGGCATGGATGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: GFWCQRQRKAQSEGSAEMCTWEP*AWMSRA
Trigger: TGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCA...CATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTTGCACCTGGGAACCTTaGGCATGGATGAGCAGAGCA +
Preference number: 4 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCCTWEP*AWMSRA
Trigger: TGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCA...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGCATCCAGGCCTAGCGTaGATTTCATGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KRQSRGSLSVLLPCVEGQHPGLA*ISWSAR
Trigger: CCTGGCTGACCATGAAATCCACGCTAGGCCTGGATG...CTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGAGCTCCCTGAATCCTTaGGGAAGGGCTGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVSSLNP*GRAEMA
Trigger: AGCCATCTCAGCCCTTCCCCAAGGATTCAGGGAGCT...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGGCAGCCACATCATGCTaGAAGCTCCCTGAATCCTTG +
Preference number: 4 (lower is better)
Translates to: SCWLESQSPAGFWCQRQRAATSC*KLPESL
Trigger: CAAGGATTCAGGGAGCTTCCAGCATGATGTGGCTGC...CCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
3UTR CAA 72 bp GTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTaGGATGTGACCAGACACATGCCCAGAGCTGCCTGC +
Preference number: 4 (lower is better)
Translates to: VHSPIMLAFFSP*DVTRHMPRAAC
Trigger: GCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAGCATTCACAGGCAGTaGGCCAGTAAACCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLSIHRQ*ASKPVL
Trigger: GAGAACCGGTTTACTGGCTCACTGCCTGTGAATGCT...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACTCCCGTGGGGTCCTTaGAAACCACACTGGCGTCCA +
Preference number: 4 (lower is better)
Translates to: CPLSNHAGLLLPLGCDQTLPWGP*KPHWRP
Trigger: TGGACGCCAGTGTGGTTTTCAAGGACCCCACGGGAG...TGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTAAGGAAGGCCCAAAGTaGGGGCAGCGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCKEGPK*GQRRDE
Trigger: CTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTT...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAAGCAGAGGACACCCAAGGCGAGGGTaGCAGGCCTTTCTTGTTGGC +
Preference number: 4 (lower is better)
Translates to: PWAWMSRATTGLKRQSRGHPRRG*QAFLVG
Trigger: GCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTG...TCCTCTGCTTTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCACCTCTAAAATTAAGCTaGGGCAGGAGAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: RGRPPLLWCGSFHLLSCPPLKLS*GRRGTP
Trigger: GGGTGTCCCTCTCCTGCCTCAGCTTAATTTTAGAGG...TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTCCTCTAAAATTAAGCTaGGGCAGGAGAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAPLKLS*GRRGTP
Trigger: GGGTGTCCCTCTCCTGCCTCAGCTTAATTTTAGAGG...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTCCAGGGACTAGGGTATaGAGGGACAAGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAPGTRV*RDKKTR
Trigger: CCTGGTTTTCTTGTCCCTTCATACCCTAGTCCCTGG...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAACCAGGGACTAGGGTATaGAGGGACAAGAAAACCAGG +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEPGTRV*RDKKTR
Trigger: CCTGGTTTTCTTGTCCCTTCATACCCTAGTCCCTGG...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGAGTAAACCGGTTCTCTaGATCCTCCACAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: VGWRASLRPDSGANGKGRSKPVL*ILHSRQ
Trigger: TTGTCTGCTGTGGAGGATGCAGAGAACCGGTTTACT...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCAGTAAACCGGTTCTCTaGATCCTCCACAGCAGACAA +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFSKPVL*ILHSRQ
Trigger: TTGTCTGCTGTGGAGGATGCAGAGAACCGGTTTACT...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAGGGGAGCTGCTCCTATaGATGATGGACGGCTGTCAG +
Preference number: 4 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETGELLL*MMDGCQ
Trigger: CTGACAGCCGTCCATCATGCATAGGAGCAGCTCCCC...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGAAGCCACCAACTTGCTaGTGTTGGCTCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGEKPPTC*CWLSKV
Trigger: CACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTT...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCTCAAAGCCACCAACTTaGTGCTGTTGGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGSKPPT*CCWLSK
Trigger: CTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGA...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGTCAAAGCCACCAACTTaGTGCTGTTGGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAESKPPT*CCWLSK
Trigger: CTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGA...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGTCAAAGCCACCAACTTaGTGCTGTTGGCTCTCAAAG +
Preference number: 4 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRSKPPT*CCWLSK
Trigger: CTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGA...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGCTCCTCCAACTCCATaGTTGCCAGGACTTTATCAA +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVAPPTP*LPGLYQ
Trigger: TTGATAAAGTCCTGGCAAGCATGGAGTTGGAGGAGC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAACTGAACCCTCCCGCTaGTGGGCAGGCAGGATTGGT +
Preference number: 4 (lower is better)
Translates to: TWEPWAWMSRATTGLKRQTEPSR*WAGRIG
Trigger: ACCAATCCTGCCTGCCCAGCAGCGGGAGGGTTCAGT...TTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGTTGGAGAGGCTGAAGTaGTTGAACAGGGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVLERLK*LNRGAL
Trigger: CAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAA...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTCCATCCAGGTCATCTaGTTCTGGGAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: LPLGCDQTHAQSCLLMVGSIQVI*FWEFFL
Trigger: GAGGAAGAACTCCCAGAAGCAGATGACCTGGATGGA...ACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTAACAGCAGCAGCCTaGAGGACTGTGCCTGCACAG +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCVTAAA*RTVPAQ
Trigger: CTGTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTAC...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGTGGAGTCCTACATTaGATGACAGGATCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGRGVLH*MTGSRD
Trigger: GTCTCTAGATCCTGTCATCCAATGTAGGACTCCACG...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTAGTGGAGTTGCTGAGTaGGAACTGTTAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVSGVAE*ELLRQL
Trigger: CAACTGCCTTAACAGTTCCCACTCAGCAACTCCACT...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGAGTGGAGTTGCTGAGTaGGAACTGTTAAGGCAGTTG +
Preference number: 4 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRSGVAE*ELLRQL
Trigger: CAACTGCCTTAACAGTTCCCACTCAGCAACTCCACT...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGACTTGGAGACTGGAATaGCTGACAAGGGAAACGATT +
Preference number: 4 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQTWRLE*LTRETI
Trigger: AATCGTTTCCCTTGTCAGCCATTCCAGTCTCCAAGT...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCGGCAGTCTCAACTACTaGTCCCACAGAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TQGEGDRPFLLAGEPVSGGSLNY*SHRRSL
Trigger: AAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCC...GCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGGGCAGTCTCAACTACTaGTCCCACAGAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: AGFWCQRQRKAQSEGSAEGSLNY*SHRRSL
Trigger: AAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCC...CTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTAGAGCTGCCTGCTCATaGTGGGTTGTCCTGCGTTGG +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCRAACS*WVVLRW
Trigger: CCAACGCAGGACAACCCACCATGAGCAGGCAGCTCT...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAGGCCGCCATTGTTGTaGTGTGGCTCCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLRPPLL*CGSFHL
Trigger: GAGATGAAAGGAGCCACACCACAACAATGGCGGCCT...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAAGGCCGCCATTGTTGTaGTGTGGCTCCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQRPPLL*CGSFHL
Trigger: GAGATGAAAGGAGCCACACCACAACAATGGCGGCCT...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCAGCTGCTCCTATGCATaGTGGACGGCTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFSCSYA*WTAVST
Trigger: AGTGCTGACAGCCGTCCATCATGCATAGGAGCAGCT...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAGCTGCTCCTATGCATaGTGGACGGCTGTCAGCACT +
Preference number: 4 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETSCSYA*WTAVST
Trigger: AGTGCTGACAGCCGTCCATCATGCATAGGAGCAGCT...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATCCTGGGCGGACATaGTACCCGCTTTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: CPLSNHAGLLLPLGCDQTHPGRT*YPLCGW
Trigger: CCATCCACAAAGCGGGTATCATGTCCGCCCAGGATG...TGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGAGTCCTACATTGGATaGCAGGATCTAGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVESYIG*QDLETH
Trigger: ATGAGTCTCTAGATCCTGTCATCCAATGTAGGACTC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGTGTTGGGTGTCACGTTaGGGTAGTGATTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: QERDTQGEGDRPFLLAGECWVSR*GSDFEV
Trigger: CACTTCGAAATCACTACCTCAACGTGACACCCAACA...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGAAAGGAAGGCCCAAAGTaGGGGCAGCGCAGAGATGAG +
Preference number: 4 (lower is better)
Translates to: CVHSPIMLAFFSPLDVTRKEGPK*GQRRDE
Trigger: CTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTT...TCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATGAAAGCAGAGGAAGCCTaGGCGTGCTTCTCCCCTGTG +
Preference number: 4 (lower is better)
Translates to: HSPIMLAFFSPLDVTRHMKAEEA*ACFSPV
Trigger: CACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTT...CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCAACCTTGGGCATGGATaGGCAGAGCAACCACAGGTC +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFNLGHG*AEQPQV
Trigger: GACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTT...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGGTTCTGTGCTGTTCTaGAGCCTTCCTCGGGCTTTG +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCGSVLF*SLPRAL
Trigger: CAAAGCCCGAGGAAGGCTTCAGAACAGCACAGAACC...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCAGAAGACACTGGAGCTTaGGGTTGTAAGGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: RGRPPLLWCGSFHLLSCPEDTGA*GCKGIR
Trigger: TCGGATACCCTTACAACCGCAAGCTCCAGTGTCTTC...TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GCGTTGGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGTCTTCAGGAAGCTCACTGGGCAGGCAGGATTaGTATGGCCTCACTGCTGAC +
Preference number: 4 (lower is better)
Translates to: ALGQSQLLVPQKKSSGSSLGRQD*YGLTAD
Trigger: GTCAGCAGTGAGGCCATACCAATCCTGCCTGCCCAG...TGAGCTTCCTGAAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR CCA 90 bp CCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAAGCAGAGGAGTCTGCAGAGCTCCCTaGGGACCTTTTGGGGTACCA +
Preference number: 4 (lower is better)
Translates to: PWAWMSRATTGLKRQSRGVCRAP*GPFGVP
Trigger: TGGTACCCCAAAAGGTCCCCAGGGAGCTCTGCAGAC...TCCTCTGCTTTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGAGTCTGCAGAGCTCCCTaGGGACCTTTTGGGGTACCA +
Preference number: 4 (lower is better)
Translates to: CVHSPIMLAFFSPLDVTRVCRAP*GPFGVP
Trigger: TGGTACCCCAAAAGGTCCCCAGGGAGCTCTGCAGAC...TCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCGGCTTCAGCTCATTCTaGCACGTCTCCAGCAGCAAC +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFGFSSF*HVSSSN
Trigger: GTTGCTGCTGGAGACGTGCCAGAATGAGCTGAAGCC...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGAGGGGAAGGGCTGAGATaGCTTGAGGAAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: CVHSPIMLAFFSPLDVTRGEGLR*LEEAPI
Trigger: GATGGGAGCTTCCTCAAGCCATCTCAGCCCTTCCCC...TCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGTCAGGCCGCCATTGTTGTaGTGTGGCTCCTTTCATCTC +
Preference number: 4 (lower is better)
Translates to: GGLSCVGAVSTTGPTEEVRPPLL*CGSFHL
Trigger: GAGATGAAAGGAGCCACACCACAACAATGGCGGCCT...GACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR CCA 90 bp CCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATACAGTGCTTCCGGGCTaGGGTCAGAGGGATGAGTCT +
Preference number: 4 (lower is better)
Translates to: PLSNHAGLLLPLGCDQTHTVLPG*GQRDES
Trigger: AGACTCATCCCTCTGACCCCAGCCCGGAAGCACTGT...ATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCCATCCAGGCCTAGCGTaGATTTCATGGTCAGCCAGG +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFHPGLA*ISWSAR
Trigger: CCTGGCTGACCATGAAATCCACGCTAGGCCTGGATG...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTAGCATTCACAGGCAGTaGGCCAGTAAACCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCSIHRQ*ASKPVL
Trigger: GAGAACCGGTTTACTGGCTCACTGCCTGTGAATGCT...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAATGTTGGGTGTCACGTTaGGGTAGTGATTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKECWVSR*GSDFEV
Trigger: CACTTCGAAATCACTACCTCAACGTGACACCCAACA...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCACAGAAGAAGTCACAGCAAACAGCTTCTaGAAACTGCACGCCATAGCG +
Preference number: 4 (lower is better)
Translates to: GGLSCVGAVSTTGPTEEVTANSF*KLHAIA
Trigger: CGCTATGGCGTGCAGTTTGCAGAAGCTGTTTGCTGT...GACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR GCA 90 bp AAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCTCCTCCAACTCCATaGTTGCCAGGACTTTATCAA +
Preference number: 4 (lower is better)
Translates to: KRQSRGSLSVLLPCVEGQAPPTP*LPGLYQ
Trigger: TTGATAAAGTCCTGGCAAGCATGGAGTTGGAGGAGC...CTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTTCCACTCTCCAATCATaGTGGCCTTCTTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCSTLQS*WPSSPP
Trigger: AGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGA...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACATCCACTCTCCAATCATaGTGGCCTTCTTCTCCCCCT +
Preference number: 4 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETSTLQS*WPSSPP
Trigger: AGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGA...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAATCCTCCTCCACAGATaGCTGGGAACTAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQILLHR*LGTSNN
Trigger: ATTGTTGCTAGTTCCCAGGCATCTGTGGAGGAGGAT...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTGACGGCTGTCAGCACTaGGCGTGCTGGAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPDGCQH*ACWRQG
Trigger: TCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTC...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGGACGGCTGTCAGCACTaGGCGTGCTGGAGGCAGGGA +
Preference number: 4 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLDGCQH*ACWRQG
Trigger: TCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTC...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGCGTGGAGTCCTACATTaGATGACAGGATCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVRGVLH*MTGSRD
Trigger: GTCTCTAGATCCTGTCATCCAATGTAGGACTCCACG...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCACTAGCTGCACCAGGTaGTTGGTGACTATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFTSCTR*LVTMGV
Trigger: GACACCCATAGTCACCAACCACCTGGTGCAGCTAGT...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTACTAGCTGCACCAGGTaGTTGGTGACTATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCTSCTR*LVTMGV
Trigger: GACACCCATAGTCACCAACCACCTGGTGCAGCTAGT...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAGGCAGTCTCAACTACTaGTCCCACAGAAGAAGTCTT +
Preference number: 4 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQGSLNY*SHRRSL
Trigger: AAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCC...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAAGCAGAGGATGGGTTGTCCTGCGTTaGGGCAGTCTCAACTACTGG +
Preference number: 4 (lower is better)
Translates to: PWAWMSRATTGLKRQSRGWVVLR*GSLNYW
Trigger: CCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCA...TCCTCTGCTTTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAAGCAGAGGAACAGGCCTTTCTTGTTaGCTGGAGAGCCAGTCTCCG +
Preference number: 4 (lower is better)
Translates to: PWAWMSRATTGLKRQSRGTGLSC*LESQSP
Trigger: CGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT...TCCTCTGCTTTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATAGCTCCCTGAATCCTTaGGGAAGGGCTGAGATGGCT +
Preference number: 4 (lower is better)
Translates to: PLSNHAGLLLPLGCDQTHSSLNP*GRAEMA
Trigger: AGCCATCTCAGCCCTTCCCCAAGGATTCAGGGAGCT...ATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGGAGTCCTACATTGGATaGCAGGATCTAGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: CVEGQAAIVVVWLLSSPQESYIG*QDLETH
Trigger: ATGAGTCTCTAGATCCTGTCATCCAATGTAGGACTC...CTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAGAGTCCTACATTGGATaGCAGGATCTAGAGACTCAT +
Preference number: 4 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQESYIG*QDLETH
Trigger: ATGAGTCTCTAGATCCTGTCATCCAATGTAGGACTC...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCGTAGTGATTTCGAAGTaGAGGAGAAAACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFVVISK*RRKHSN
Trigger: ATTGGAGTGTTTTCTCCTTCACTTCGAAATCACTAC...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGGTAGTGATTTCGAAGTaGAGGAGAAAACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: GRRGTPKARVTGLSCWLEVVISK*RRKHSN
Trigger: ATTGGAGTGTTTTCTCCTTCACTTCGAAATCACTAC...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACCTCTAAAATTAAGCTaGGGCAGGAGAGGGACACCC +
Preference number: 4 (lower is better)
Translates to: CVHSPIMLAFFSPLDVTRPLKLS*GRRGTP
Trigger: GGGTGTCCCTCTCCTGCCTCAGCTTAATTTTAGAGG...TCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACAGCTTGCGCAGCACCATaGCAATGCTGTAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: CPLSNHAGLLLPLGCDQTACAAP*QCCRYR
Trigger: TCTGTACCTACAGCATTGTCATGGTGCTGCGCAAGC...TGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS-3UTR GCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGCAGCCTGGAGGACTGTaGCTGCACAGTCTCCTGTGG +
Preference number: 4 (lower is better)
Translates to: GTRKPGPISSKIKLRQERQPGGL*LHSLLW
Trigger: CCACAGGAGACTGTGCAGGCACAGTCCTCCAGGCTG...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCAAGCCACCAACTTGCTaGTGTTGGCTCTCAAAGGTG +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFKPPTC*CWLSKV
Trigger: CACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTT...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCACTCCAACTCCATGCTTaGCAGGACTTTATCAAATTC +
Preference number: 4 (lower is better)
Translates to: DRPFLLAGEPVSGRILVPLQLHA*QDFIKF
Trigger: GAATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAG...TGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAAGCAGAGGATTGGAGAGGCTGAAGTaGTTGAACAGGGGAGCGTTG +
Preference number: 4 (lower is better)
Translates to: PWAWMSRATTGLKRQSRGLERLK*LNRGAL
Trigger: CAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAA...TCCTCTGCTTTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGAAGCTGCTTCAGGGCTaGCTGGTGAGGCAGGATCCC +
Preference number: 4 (lower is better)
Translates to: GTRKPGPISSKIKLRQERKLLQG*LVRQDP
Trigger: GGGATCCTGCCTCACCAGGCAGCCCTGAAGCAGCTT...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR GCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTTGCAGCCACATCATaGTGGAAGCTCCCTGAATCC +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFFAATS*WKLPES
Trigger: GGATTCAGGGAGCTTCCAGCATGATGTGGCTGCAAA...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTCCATCCAGGTCATCTaGTTCTGGGAGTTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFSIQVI*FWEFFL
Trigger: GAGGAAGAACTCCCAGAAGCAGATGACCTGGATGGA...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTACTTGGAGACTGGAATaGCTGACAAGGGAAACGATT +
Preference number: 4 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCTWRLE*LTRETI
Trigger: AATCGTTTCCCTTGTCAGCCATTCCAGTCTCCAAGT...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACATGGGAGTTCGAGGTCTaGGTAAATGAGCTTTGCCAC +
Preference number: 4 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETWEFEV*VNELCH
Trigger: GTGGCAAAGCTCATTTACCCAGACCTCGAACTCCCA...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGTGCTTCTCCCCTGTGTaGAGGGGCAGGCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLCFSPV*RGRPPL
Trigger: CAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCA...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTTGCTTCTCCCCTGTGTaGAGGGGCAGGCCGCCATTG +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPCFSPV*RGRPPL
Trigger: CAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCA...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp TGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACAGGTCATCTGCTTCTaGGAGTTCTTCCTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: CVHSPIMLAFFSPLDVTRQVICF*EFFLRG
Trigger: TCCCCTGAGGAAGAACTCCCAGAAGCAGATGACCTG...TCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CTTCTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGTGGGTAAATGAGCTTTaGCACTTAACCAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LLPLGCDQTHAQSCLLMVWVNEL*HLTRNL
Trigger: CAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCA...CACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAGAAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTTGGGTAAATGAGCTTTaGCACTTAACCAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCWVNEL*HLTRNL
Trigger: CAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCA...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAATGGGTAAATGAGCTTTaGCACTTAACCAGGAACTTG +
Preference number: 4 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEWVNEL*HLTRNL
Trigger: CAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCA...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTGCCACACCTCTGTCCTaGACCTGGGAACCTTGGGCA +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPATPLS*TWEPWA
Trigger: TGCCCAAGGTTCCCAGGTGCAGGACAGAGGTGTGGC...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTATCCTCCTCCACAGATaGCTGGGAACTAGCAACAAT +
Preference number: 4 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCILLHR*LGTSNN
Trigger: ATTGTTGCTAGTTCCCAGGCATCTGTGGAGGAGGAT...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTTGGACACGACCCAGGTaGAAGTCTCGGACTCCGAGG +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPWTRPR*KSRTPR
Trigger: CCTCGGAGTCCGAGACTTCCACCTGGGTCGTGTCCA...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp CCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATCCAACTTGCTGCTGTTaGCTCTCAAAGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: PLSNHAGLLLPLGCDQTHPTCCC*LSKVSR
Trigger: CCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGG...ATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGGAACCCTCCCGCTGCTaGGCAGGCAGGATTGGTATG +
Preference number: 4 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLEPSRC*AGRIGM
Trigger: CATACCAATCCTGCCTGCCCAGCAGCGGGAGGGTTC...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCCGTGGAGTCCTACATTaGATGACAGGATCTAGAGAC +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFRGVLH*MTGSRD
Trigger: GTCTCTAGATCCTGTCATCCAATGTAGGACTCCACG...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTGGAAACGGCGAGTTTTaGCTCGGGTGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPGNGEF*LGWRDG
Trigger: CCCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCC...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGGGAAACGGCGAGTTTTaGCTCGGGTGGAGGGATGGG +
Preference number: 4 (lower is better)
Translates to: EGTRKPGPISSKIKLRQEGNGEF*LGWRDG
Trigger: CCCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCC...CTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGGGGGAAGGGCTGAGATaGCTTGAGGAAGCTCCCATC +
Preference number: 4 (lower is better)
Translates to: GTRKPGPISSKIKLRQERGEGLR*LEEAPI
Trigger: GATGGGAGCTTCCTCAAGCCATCTCAGCCCTTCCCC...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTCCTCCACAGATGCCTaGGAACTAGCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFSSTDA*ELATIS
Trigger: AGAGATTGTTGCTAGTTCCCAGGCATCTGTGGAGGA...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGGTTGGCTCTCAAAGGTaGGTAGGGGGTGTAAGGCTG +
Preference number: 4 (lower is better)
Translates to: GTRKPGPISSKIKLRQERVGSQR*VGGVRL
Trigger: CAGCCTTACACCCCCTACTCACCTTTGAGAGCCAAC...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTCATCCTGGGCGGACATaGTACCCGCTTTGTGGATGG +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPHPGRT*YPLCGW
Trigger: CCATCCACAAAGCGGGTATCATGTCCGCCCAGGATG...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGTCCGGCTGGCAGCAGTaGCTAGCTGCACCAGGTGGT +
Preference number: 4 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKSGWQQ*LAAPGG
Trigger: ACCACCTGGTGCAGCTAGTCACTGCTGCCAGCCGGA...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGTCCGAGTCAGGGACTTaGTCATCACCGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: GTRKPGPISSKIKLRQERSESGT*SSPPCW
Trigger: CCAACATGGCGGTGATGATCAAGTCCCTGACTCGGA...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGGTAGTGATTTCGAAGTaGAGGAGAAAACACTCCAAT +
Preference number: 4 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVVVISK*RRKHSN
Trigger: ATTGGAGTGTTTTCTCCTTCACTTCGAAATCACTAC...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp TGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGATGTTGGGTGTCACGTTaGGGTAGTGATTTCGAAGTG +
Preference number: 4 (lower is better)
Translates to: CVHSPIMLAFFSPLDVTRCWVSR*GSDFEV
Trigger: CACTTCGAAATCACTACCTCAACGTGACACCCAACA...TCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGATGCTGGAAGCTCCCTaGATCCTTGGGGAAGGGCTG +
Preference number: 4 (lower is better)
Translates to: EGTRKPGPISSKIKLRQEMLEAP*ILGEGL
Trigger: CAGCCCTTCCCCAAGGATTCAGGGAGCTTCCAGCAT...CTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTTCCGAGTCAGGGACTTaGTCATCACCGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPSESGT*SSPPCW
Trigger: CCAACATGGCGGTGATGATCAAGTCCCTGACTCGGA...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGTCCGAGTCAGGGACTTaGTCATCACCGCCATGTTGG +
Preference number: 4 (lower is better)
Translates to: EGTRKPGPISSKIKLRQESESGT*SSPPCW
Trigger: CCAACATGGCGGTGATGATCAAGTCCCTGACTCGGA...CTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACACTCCAACTCCATGCTTaGCAGGACTTTATCAAATTC +
Preference number: 4 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETLQLHA*QDFIKF
Trigger: GAATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAG...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCATGGTGGGTTGTCCTaGGTTGGGGCAGTCTCAACT +
Preference number: 4 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLHGGLS*VGAVST
Trigger: AGTTGAGACTGCCCCAACGCAGGACAACCCACCATG...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTCCTTGCGCAGCACCATaGCAATGCTGTAGGTACAGA +
Preference number: 4 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPPCAAP*QCCRYR
Trigger: TCTGTACCTACAGCATTGTCATGGTGCTGCGCAAGG...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585683.6
CDS-3UTR CCA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGCCAACTTGCTGCTGTTaGCTCTCAAAGGTGAGTAGG +
Preference number: 4 (lower is better)
Translates to: GTRKPGPISSKIKLRQERPTCCC*LSKVSR
Trigger: CCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGG...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCAGAGCACCATGGGTTaGAGTTTGGGGCGCGGAAAC +
Preference number: 4 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKQSTMG*SLGRGN
Trigger: GTTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTG...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGCAGGTCATCTGCTTCTaGGAGTTCTTCCTCAGGGGA +
Preference number: 4 (lower is better)
Translates to: EGTRKPGPISSKIKLRQEQVICF*EFFLRG
Trigger: TCCCCTGAGGAAGAACTCCCAGAAGCAGATGACCTG...CTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR TCA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGAGCATTCACAGGCAGTaGGCCAGTAAACCGGTTCTC +
Preference number: 4 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKSIHRQ*ASKPVL
Trigger: GAGAACCGGTTTACTGGCTCACTGCCTGTGAATGCT...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCAACAGGAGACCCAATaGAAGACACTGGAGCTTGCG +
Preference number: 4 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKQQETQ*KTLELA
Trigger: CGCAAGCTCCAGTGTCTTCCATTGGGTCTCCTGTTG...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGACTAGCTGCACCAGGTaGTTGGTGACTATGGGTGTC +
Preference number: 4 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKTSCTR*LVTMGV
Trigger: GACACCCATAGTCACCAACCACCTGGTGCAGCTAGT...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGTCCTCCACAGATGCCTaGGAACTAGCAACAATCTCT +
Preference number: 4 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLSSTDA*ELATIS
Trigger: AGAGATTGTTGCTAGTTCCCAGGCATCTGTGGAGGA...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR GCA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGGAAGACACTGGAGCTTaGGGTTGTAAGGGTATCCGA +
Preference number: 4 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKEDTGA*GCKGIR
Trigger: TCGGATACCCTTACAACCGCAAGCTCCAGTGTCTTC...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CCA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGACTTGGAGACTGGAATaGCTGACAAGGGAAACGATT +
Preference number: 4 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLTWRLE*LTRETI
Trigger: AATCGTTTCCCTTGTCAGCCATTCCAGTCTCCAAGT...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS CCA 90 bp CCAGCTGGGCCAGGGAAACGGCGAGTTTTGGCTCGGGTGGAGGGATaGGTGGGCTGCTGGGGTGTCCGGCTGGCAGCAGTGACTAGCTGC +
Preference number: 5 (lower is better)
Translates to: PAGPGKRRVLARVEG*VGCWGVRLAAVTSC
Trigger: GCAGCTAGTCACTGCTGCCAGCCGGACACCCCAGCAGCCCACCCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCCCTGGCCCAGCTGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 90 bp CCAGGGAAACGGCGAGTTTTGGCTCGGGTGGAGGGATGGGTGGGCTaGTGGGGTGTCCGGCTGGCAGCAGTGACTAGCTGCACCAGGTGG +
Preference number: 5 (lower is better)
Translates to: PGKRRVLARVEGWVG*WGVRLAAVTSCTRW
Trigger: CCACCTGGTGCAGCTAGTCACTGCTGCCAGCCGGACACCCCAGCAGCCCACCCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGGGAGTCGCCGGGGCCTaGGACACGACCCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: VGWRASLRPDSGANGKGRGVAGA*DTTQVE
Trigger: TTCCACCTGGGTCGTGTCCAAGGCCCCGGCGACTCC...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCGGAGTCGCCGGGGCCTaGGACACGACCCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: QSPAGFWCQRQRKAQSEGGVAGA*DTTQVE
Trigger: TTCCACCTGGGTCGTGTCCAAGGCCCCGGCGACTCC...GCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS GCA 90 bp GGGGAGCTGCTCCTATGCATGATGGACGGCTGTCAGCACTGGGCGTaGTGGAGGCAGGGAGGCAGAGGTCCAAGTCTGGCAGGCCCAAAG +
Preference number: 5 (lower is better)
Translates to: GELLLCMMDGCQHWA*WRQGGRGPSLAGPK
Trigger: CTTTGGGCCTGCCAGACTTGGACCTCTGCCTCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGCAGCTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 90 bp GCCTTAGGGGAGCTGCTCCTATGCATGATGGACGGCTGTCAGCACTaGGCGTGCTGGAGGCAGGGAGGCAGAGGTCCAAGTCTGGCAGGC +
Preference number: 5 (lower is better)
Translates to: ALGELLLCMMDGCQH*ACWRQGGRGPSLAG
Trigger: GCCTGCCAGACTTGGACCTCTGCCTCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGCAGCTCCCCTAAGGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGCCTGCTCATGGTGGGTaGTCCTGCGTTGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQPAHGG*SCVGAV
Trigger: GACTGCCCCAACGCAGGACAACCCACCATGAGCAGG...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS CCA 90 bp GAGCTGCTCCTATGCATGATGGACGGCTGTCAGCACTGGGCGTGCTaGAGGCAGGGAGGCAGAGGTCCAAGTCTGGCAGGCCCAAAGCCT +
Preference number: 5 (lower is better)
Translates to: ELLLCMMDGCQHWAC*RQGGRGPSLAGPKP
Trigger: AGGCTTTGGGCCTGCCAGACTTGGACCTCTGCCTCCCTGCCTCCAGCACGCCCAGTGCTGACAGCCGTCCATCATGCATAGGAGCAGCTC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp AGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCAGGAGTCGCCGGGGCCTaGGACACGACCCAGGTGGAA +
Preference number: 5 (lower is better)
Translates to: RGRPPLLWCGSFHLLSCPGVAGA*DTTQVE
Trigger: TTCCACCTGGGTCGTGTCCAAGGCCCCGGCGACTCC...TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGGGAAACGGCGAGTTTaGGCTCGGGTGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: RGSLSVLLPCVEGQAAIVGKRRV*ARVEGW
Trigger: CCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCCC...AACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGCCACACTGGCGTCCATaGTGCTCCGAGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGPHWRP*CSESGT
Trigger: AGTCCCTGACTCGGAGCACAATGGACGCCAGTGTGG...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS GCA 90 bp GAGGGAGCAGTGGGGTGTAACAGCAGCAGCCTGGAGGACTGTGCCTaGACAGTCTCCTGTGGCCTAGAAGAGACAGGTCTCAGGCGCCCA +
Preference number: 5 (lower is better)
Translates to: EGAVGCNSSSLEDCA*TVSCGLEETGLRRP
Trigger: TGGGCGCCTGAGACCTGTCTCTTCTAGGCCACAGGAGACTGTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTACACCCCACTGCTCCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 90 bp TCCGAGGGACAGTGCTTCCGGGCTGGGGTCAGAGGGATGAGTCTCTaGGATATAGGGAAAGTCGCCAGGAGACTGGCGGCAGGCGCCTTA +
Preference number: 5 (lower is better)
Translates to: SEGQCFRAGVRGMSL*DIGKVARRLAAGAL
Trigger: TAAGGCGCCTGCCGCCAGTCTCCTGGCGACTTTCCCTATATCGCAGAGACTCATCCCTCTGACCCCAGCCCGGAAGCACTGTCCCTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS GCA 90 bp GCCTTGGACACGACCCAGGTGGAAGTCTCGGACTCCGAGGGACAGTaGTTCCGGGCTGGGGTCAGAGGGATGAGTCTCTGCGATATAGGG +
Preference number: 5 (lower is better)
Translates to: ALDTTQVEVSDSEGQ*FRAGVRGMSLCDIG
Trigger: CCCTATATCGCAGAGACTCATCCCTCTGACCCCAGCCCGGAAGCACTGTCCCTCGGAGTCCGAGACTTCCACCTGGGTCGTGTCCAAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CCA 90 bp GGCAGAGGTCCAAGTCTGGCAGGCCCAAAGCCTCTGAGGGAGCAGTaGGGTGTAACAGCAGCAGCCTGGAGGACTGTGCCTGCACAGTCT +
Preference number: 5 (lower is better)
Translates to: GRGPSLAGPKPLREQ*GVTAAAWRTVPAQS
Trigger: AGACTGTGCAGGCACAGTCCTCCAGGCTGCTGCTGTTACACCCCACTGCTCCCTCAGAGGCTTTGGGCCTGCCAGACTTGGACCTCTGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCGAGAGGCTGAAGTGCTaGAACAGGGGAGCGTTGCGG +
Preference number: 5 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFERLKC*NRGALR
Trigger: CCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTC...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTAGCTGCACCAGGTGGTaGGTGACTATGGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: QRKPERASPLCGGAGRHCSCTRW*VTMGVC
Trigger: GCAGACACCCATAGTCACCAACCACCTGGTGCAGCT...ACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTTCCTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTGACAGGCCTTTCTTGTaGGCTGGAGAGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: ERASPLCGGAGRHCCGVADRPFL*AGEPVS
Trigger: GGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC...AGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQGDRPF*LAGEPV
Trigger: GACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACC...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCAGGGGCAGGCCGCCATaGTTGTGGTGTGGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFRGRPP*LWCGSF
Trigger: AAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGAGGGGCAGGCCGCCATaGTTGTGGTGTGGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: VGWRASLRPDSGANGKGRRGRPP*LWCGSF
Trigger: AAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTCTGCACCTGGGAACCTaGGGCATGGATGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: KPERASPLCGGAGRHCCGLHLGT*GMDEQS
Trigger: GCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAG...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS CCA 90 bp GACCCAGGTGGAAGTCTCGGACTCCGAGGGACAGTGCTTCCGGGCTaGGGTCAGAGGGATGAGTCTCTGCGATATAGGGAAAGTCGCCAG +
Preference number: 5 (lower is better)
Translates to: DPGGSLGLRGTVLPG*GQRDESLRYRESRQ
Trigger: CTGGCGACTTTCCCTATATCGCAGAGACTCATCCCTCTGACCCCAGCCCGGAAGCACTGTCCCTCGGAGTCCGAGACTTCCACCTGGGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGTTGAACAGGGGAGCGTaGCGGACAGACTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRLNRGA*RTDFPV
Trigger: CACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAA...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGGTCCCTCTAGCAGCTaGGAGAGGCTGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: KPERASPLCGGAGRHCCGGPSSS*ERLKCL
Trigger: CAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACC...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CTCCCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTCTCCCGTGGGGTCCTaGAAAACCACACTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: LPLGCDQTHAQSCLLMVGSPVGS*KTTLAS
Trigger: GGACGCCAGTGTGGTTTTCAAGGACCCCACGGGAGA...ACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGGGAG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTCCTGCTCATGGTGGGTaGTCCTGCGTTGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCPAHGG*SCVGAV
Trigger: GACTGCCCCAACGCAGGACAACCCACCATGAGCAGG...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAACCTGCTCATGGTGGGTaGTCCTGCGTTGGGGCAGTC +
Preference number: 5 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEPAHGG*SCVGAV
Trigger: GACTGCCCCAACGCAGGACAACCCACCATGAGCAGG...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGGCCTTCTTCTCCCCCTaGGATGTGACCAGACACATG +
Preference number: 5 (lower is better)
Translates to: RPDSGANGKGRPKVRAAQAFFSP*DVTRHM
Trigger: CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGC...CTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCCCAAAGTGAGGGACAGGCCTTTCTTGTaGGCTGGAGAGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: ASLRPDSGANGKGRPKVRDRPFL*AGEPVS
Trigger: GGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC...CCTCACTTTGGGCCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGTGCTTCAGGGCTGCCTaGCGCAGCACCATGACAATG +
Preference number: 5 (lower is better)
Translates to: VGWRASLRPDSGANGKGRCFRAA*RSTMTM
Trigger: CATTGTCATGGTGCTGCGCAAGGCAGCCCTGAAGCA...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000585683.6
CDS-3UTR CAA 90 bp AGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCAGAGAGGCTGAAGTGCTaGAACAGGGGAGCGTTGCGG +
Preference number: 5 (lower is better)
Translates to: RGRPPLLWCGSFHLLSCPERLKC*NRGALR
Trigger: CCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTC...TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: GRRGTPKARVTGLSCWLEAMLGT*FLGSCF
Trigger: GAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGC...CTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTCCGAGTCAGGGACTaGATCATCACCGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: GEGDRPFLLAGEPVSGRILRVRD*IITAML
Trigger: CAACATGGCGGTGATGATCAAGTCCCTGACTCGGAG...AATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTCTCCGAGTCAGGGACTaGATCATCACCGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: KPERASPLCGGAGRHCCGLRVRD*IITAML
Trigger: CAACATGGCGGTGATGATCAAGTCCCTGACTCGGAG...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGCCACACTGGCGTCCATaGTGCTCCGAGTCAGGGACT +
Preference number: 5 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVPHWRP*CSESGT
Trigger: AGTCCCTGACTCGGAGCACAATGGACGCCAGTGTGG...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCGGCAGGCCGCCATTGTaGTGGTGTGGCTCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: GGAGRHCCGVAPFISSAVGRPPL*WCGSFH
Trigger: ATGAAAGGAGCCACACCACAACAATGGCGGCCTGCC...GACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGGGCAGGCCGCCATTGTaGTGGTGTGGCTCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: SCWLESQSPAGFWCQRQRGRPPL*WCGSFH
Trigger: ATGAAAGGAGCCACACCACAACAATGGCGGCCTGCC...CCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCCCTTGGATGTGACCAGACACATGCCCAGAGCTGCCTGCTCATGGTGGGTTGTCTGCACCTGGGAACCTaGGGCATGGATGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PLGCDQTHAQSCLLMVGCLHLGT*GMDEQS
Trigger: GCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAG...ACAACCCACCATGAGCAGGCAGCTCTGGGCATGTGTCTGGTCACATCCAAGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AAGCCTGAGCGTGCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTACCATGGGTTGGAGTTaGGGGCGCGGAAACCATGAT +
Preference number: 5 (lower is better)
Translates to: KPERASPLCGGAGRHCCGTMGWS*GRGNHD
Trigger: ATCATGGTTTCCGCGCCCCAAACTCCAACCCATGGT...ACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGCACGCTCAGGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CGGCAAAGGAAGGCCCAAAGTGAGGGCAGCGCAGAGATGAGGGGGCTCTCAGGGCTCAAAGCCACCAACTaGCTGCTGTTGGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: RQRKAQSEGSAEMRGLSGLKATN*LLLALK
Trigger: TTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAG...CCCTGAGAGCCCCCTCATCTCTGCGCTGCCCTCACTTTGGGCCTTCCTTTGCCG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTTTGAACAGGGGAGCGTaGCGGACAGACTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: CGGAGRHCCGVAPFISSALNRGA*RTDFPV
Trigger: CACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAA...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp ACCACAGGTCTGAAGAGACAAAGCAGAGGAAGCCTGAGCGTGCTTCTCCCCTGTGGGAAACGGCGAGTTTaGGCTCGGGTGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: TTGLKRQSRGSLSVLLPCGKRRV*ARVEGW
Trigger: CCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCCC...ACAGGGGAGAAGCACGCTCAGGCTTCCTCTGCTTTGTCTCTTCAGACCTGTGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCACTCCGAGTCAGGGACTaGATCATCACCGCCATGTTG +
Preference number: 5 (lower is better)
Translates to: DRPFLLAGEPVSGRILVPLRVRD*IITAML
Trigger: CAACATGGCGGTGATGATCAAGTCCCTGACTCGGAG...TGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTGTGGGTTGTCCTGCGTaGGGGCAGTCTCAACTACTG +
Preference number: 5 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCVGCPA*GQSQLL
Trigger: CAGTAGTTGAGACTGCCCCAACGCAGGACAACCCAC...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGGTGGGTTGTCCTGCGTaGGGGCAGTCTCAACTACTG +
Preference number: 5 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVVGCPA*GQSQLL
Trigger: CAGTAGTTGAGACTGCCCCAACGCAGGACAACCCAC...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAGACAGGCCTTTCTTGTaGGCTGGAGAGCCAGTCTCC +
Preference number: 5 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQDRPFL*AGEPVS
Trigger: GGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGTC...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCGDRPF*LAGEPV
Trigger: GACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACC...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAGGTGACAGGCCTTTCTaGTTGGCTGGAGAGCCAGTC +
Preference number: 5 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQGDRPF*LAGEPV
Trigger: GACTGGCTCTCCAGCCAACAAGAAAGGCCTGTCACC...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGGGCAGGCCGCCATTGTaGTGGTGTGGCTCCTTTCAT +
Preference number: 5 (lower is better)
Translates to: CVEGQAAIVVVWLLSSPQGRPPL*WCGSFH
Trigger: ATGAAAGGAGCCACACCACAACAATGGCGGCCTGCC...CTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTAGCCTTCCTCGGGCTTaGCAGCCACATCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: CGGAGRHCCGVAPFISSASLPRA*QPHHAG
Trigger: TCCAGCATGATGTGGCTGCAAAGCCCGAGGAAGGCT...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CTGTCCTGCACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAGCCTTCCTCGGGCTTaGCAGCCACATCATGCTGGA +
Preference number: 5 (lower is better)
Translates to: LSCTWEPWAWMSRATTGLSLPRA*QPHHAG
Trigger: TCCAGCATGATGTGGCTGCAAAGCCCGAGGAAGGCT...CAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAGGACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS TCA 90 bp TGCTTACAAGGAGAGGCATATGCTGAGCCTTCCACGGCCCACTTGTaGCTTCCCAGGTCTCCAAGTGTGCCAGGGCAACCGGGGTTAGGA +
Preference number: 5 (lower is better)
Translates to: CLQGEAYAEPSTAHL*LPRSPSVPGQPGLG
Trigger: TCCTAACCCCGGTTGCCCTGGCACACTTGGAGACCTGGGAAGTCACAAGTGGGCCGTGGAAGGCTCAGCATATGCCTCTCCTTGTAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588073.1
CDS GCA 90 bp AGGGCTGCTCTGAATGGTCCCTCTAGCAGCTTGGAGAGGCTGAAGTaGTTGAACAGGGGAGCGTTGCGGACAGACTTCCCAGTGGAGTTG +
Preference number: 5 (lower is better)
Translates to: RAALNGPSSSLERLK*LNRGALRTDFPVEL
Trigger: CAACTCCACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACCATTCAGAGCAGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 90 bp TTTCATGGTCAGCCAGGGCCCTCGCCCAAAATCCTCCTCCACAGATaGCTGGGAACTAGCAACAATCTGGTGAGGCAGGATCCCAGCTGG +
Preference number: 5 (lower is better)
Translates to: FHGQPGPSPKILLHR*LGTSNNLVRQDPSW
Trigger: CCAGCTGGGATCCTGCCTCACCAGATTGTTGCTAGTTCCCAGGCATCTGTGGAGGAGGATTTTGGGCGAGGGCCCTGGCTGACCATGAAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588434.1
CDS GCA 90 bp GCCATGTTGGGGACCTTGTTCCTAGGAAGCTGCTTCAGGGCTGCCTaGTTACAAGGAGAGGCATATGCTGAGCCTTCCACGGCCCACTTG +
Preference number: 5 (lower is better)
Translates to: AMLGTLFLGSCFRAA*LQGEAYAEPSTAHL
Trigger: CAAGTGGGCCGTGGAAGGCTCAGCATATGCCTCTCCTTGTAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588073.1
CDS CCA 90 bp GGTCGTGGAGTCCTACATTGGATGACAGGATCTAGAGACTCATCCTaGGCGGACATGATACCCGCTTTGTGGATGGCAGGCACAGGCCCC +
Preference number: 5 (lower is better)
Translates to: GRGVLHWMTGSRDSS*ADMIPALWMAGTGP
Trigger: GGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGATCCTGTCATCCAATGTAGGACTCCACGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 90 bp GTGGTTGGTGACTATGGGTGTCTGCAGAGCTCCCTGGGGACCTTTTaGGGTACCAACAGGAGACCCAATGGAAGACACTGGAGCTTGCGG +
Preference number: 5 (lower is better)
Translates to: VVGDYGCLQSSLGTF*GTNRRPNGRHWSLR
Trigger: CCGCAAGCTCCAGTGTCTTCCATTGGGTCTCCTGTTGGTACCCCAAAAGGTCCCCAGGGAGCTCTGCAGACACCCATAGTCACCAACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAGAGAGGCTGAAGTGCTaGAACAGGGGAGCGTTGCGG +
Preference number: 5 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETERLKC*NRGALR
Trigger: CCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTC...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGGCACTTAACCAGGAACTaGGAGACTGGAATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: VGWRASLRPDSGANGKGRHLTRN*ETGMAD
Trigger: GTCAGCCATTCCAGTCTCCAAGTTCCTGGTTAAGTG...CCTTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGCTCATGGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTGGTCCCACAGAAGCTGCACCAGGTGGTaGGTGACTATGGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: CSWWVVLRWGSLNYWSHRSCTRW*VTMGVC
Trigger: GCAGACACCCATAGTCACCAACCACCTGGTGCAGCT...TCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000245382.6
CDS-3UTR CAA 90 bp CACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACATCTCCCGTGGGGTCCTaGAAAACCACACTGGCGTCC +
Preference number: 5 (lower is better)
Translates to: HLGTLGMDEQSNHRSEETSPVGS*KTTLAS
Trigger: GGACGCCAGTGTGGTTTTCAAGGACCCCACGGGAGA...TGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTGCCTTCTTCTCCCCCTaGGATGTGACCAGACACATG +
Preference number: 5 (lower is better)
Translates to: WRGRPPLLWCGSFHLLSCAFFSP*DVTRHM
Trigger: CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGC...ACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS CCA 90 bp GAACAGGGGAGCGTTGCGGACAGACTTCCCAGTGGAGTTGCTGAGTaGGAACTGTTAAGGCAGTTGGAACAGGAAGGTGACCCACAGCAC +
Preference number: 5 (lower is better)
Translates to: EQGSVADRLPSGVAE*ELLRQLEQEGDPQH
Trigger: GTGCTGTGGGTCACCTTCCTGTTCCAACTGCCTTAACAGTTCCCACTCAGCAACTCCACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 90 bp AGCTGCACCAGGTGGTTGGTGACTATGGGTGTCTGCAGAGCTCCCTaGGGACCTTTTGGGGTACCAACAGGAGACCCAATGGAAGACACT +
Preference number: 5 (lower is better)
Translates to: SCTRWLVTMGVCRAP*GPFGVPTGDPMEDT
Trigger: AGTGTCTTCCATTGGGTCTCCTGTTGGTACCCCAAAAGGTCCCCAGGGAGCTCTGCAGACACCCATAGTCACCAACCACCTGGTGCAGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGAACAGGGGAGCGTaGCGGACAGACTTCCCAGTG +
Preference number: 5 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFLNRGA*RTDFPV
Trigger: CACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAA...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GCTTCTCCCCTGTGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCACAAGGGAAACGATTTaGAGGGCTGCTCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: ASPLCGGAGRHCCGVAPFTRETI*RAALNG
Trigger: ACCATTCAGAGCAGCCCTCAAAATCGTTTCCCTTGT...GAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACACAGGGGAGAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTGTTGGCTGGAGAGCACTTAACCAGGAACTaGGAGACTGGAATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: QERDTQGEGDRPFLLAGEHLTRN*ETGMAD
Trigger: GTCAGCCATTCCAGTCTCCAAGTTCCTGGTTAAGTG...CTCTCCAGCCAACAAGAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp ACAGGCCTTTCTTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAAGTAGAACAGCTTGAGTaGGGAGTTCGAGGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: TGLSCWLESQSPAGFWCQVEQLE*GVRGLG
Trigger: ACCCAGACCTCGAACTCCCAACTCAAGCTGTTCTAC...TTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAAGAAAGGCCTGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAGTAGAACAGCTTGAGTaGGGAGTTCGAGGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: LLAGEPVSGRILVPTAKEVEQLE*GVRGLG
Trigger: ACCCAGACCTCGAACTCCCAACTCAAGCTGTTCTAC...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCCGGCTGTGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGGTAGAACAGCTTGAGTaGGGAGTTCGAGGTCTGGGT +
Preference number: 5 (lower is better)
Translates to: PGCVHSPIMLAFFSPLDVVEQLE*GVRGLG
Trigger: ACCCAGACCTCGAACTCCCAACTCAAGCTGTTCTAC...CACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACACAGCCGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAAGCAGAGGACTGCACCTGGGAACCTaGGGCATGGATGAGCAGAGC +
Preference number: 5 (lower is better)
Translates to: PWAWMSRATTGLKRQSRGLHLGT*GMDEQS
Trigger: GCTCTGCTCATCCATGCCCAAGGTTCCCAGGTGCAG...TCCTCTGCTTTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACCAGAGCACCATGGGTaGGAGTTTGGGGCGCGGAAA +
Preference number: 5 (lower is better)
Translates to: CPLSNHAGLLLPLGCDQTPEHHG*EFGARK
Trigger: TTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTGG...TGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCTTCAGGGCTGCCTGCTaGCGCAGCACCATGACAATG +
Preference number: 5 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFFRAAC*RSTMTM
Trigger: CATTGTCATGGTGCTGCGCAAGCAGGCAGCCCTGAA...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS TCA 90 bp TGGCCTAGAAGAGACAGGTCTCAGGCGCCCAGCATTCACAGGCAGTaGGCCAGTAAACCGGTTCTCTGCATCCTCCACAGCAGACAAGAA +
Preference number: 5 (lower is better)
Translates to: WPRRDRSQAPSIHRQ*ASKPVLCILHSRQE
Trigger: TTCTTGTCTGCTGTGGAGGATGCAGAGAACCGGTTTACTGGCTCACTGCCTGTGAATGCTGGGCGCCTGAGACCTGTCTCTTCTAGGCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 90 bp ACAGGATCTAGAGACTCATCCTGGGCGGACATGATACCCGCTTTGTaGATGGCAGGCACAGGCCCCTTCTGGCAAGATCCACTCAGATCA +
Preference number: 5 (lower is better)
Translates to: TGSRDSSWADMIPAL*MAGTGPFWQDPLRS
Trigger: TGATCTGAGTGGATCTTGCCAGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGATCCTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 90 bp GCCTGCTCATGGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTaGTCCCACAGAAGAAGTCTTCAGGAAGCTCACTCAGGAGTCCAT +
Preference number: 5 (lower is better)
Translates to: ACSWWVVLRWGSLNY*SHRRSLQEAHSGVH
Trigger: ATGGACTCCTGAGTGAGCTTCCTGAAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCATGAGCAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS-3UTR CAA 90 bp ACCTGGGAACCTTGGGCATGGATGAGCAGAGCAACCACAGGTCTGAAGAGACAAGGTCCCTCTAGCAGCTaGGAGAGGCTGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: TWEPWAWMSRATTGLKRQGPSSS*ERLKCL
Trigger: CAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACC...TTGTCTCTTCAGACCTGTGGTTGCTCTGCTCATCCATGCCCAAGGTTCCCAGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATAGCTGCACCAGGTGGTaGGTGACTATGGGTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PLSNHAGLLLPLGCDQTHSCTRW*VTMGVC
Trigger: GCAGACACCCATAGTCACCAACCACCTGGTGCAGCT...ATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCCCTCCAACTCCATGCTaGCCAGGACTTTATCAAATT +
Preference number: 5 (lower is better)
Translates to: EGQAAIVVVWLLSSPQLSPPTPC*PGLYQI
Trigger: AATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAGG...GGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TTGTTGGCTGGAGAGCCAGTCTCCGGCCGGATTCTGGTGCCAACGGCAAAGGAAACAAGGGAAACGATTTaGAGGGCTGCTCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: LLAGEPVSGRILVPTAKETRETI*RAALNG
Trigger: ACCATTCAGAGCAGCCCTCAAAATCGTTTCCCTTGT...TTCCTTTGCCGTTGGCACCAGAATCCGGCCGGAGACTGGCTCTCCAGCCAACAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATGGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: HSPIMLAFFSPLDVTRHMAMLGT*FLGSCF
Trigger: GAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGC...CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGTCCACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACAACCATGGGTTGGAGTTaGGGGCGCGGAAACCATGAT +
Preference number: 5 (lower is better)
Translates to: CPLSNHAGLLLPLGCDQTTMGWS*GRGNHD
Trigger: ATCATGGTTTCCGCGCCCCAAACTCCAACCCATGGT...TGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTGGACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS GCA 90 bp GACTCCACATTCCAGCTCCATGCCAGGCTCCTCCAACTCCATGCTTaGCAGGACTTTATCAAATTCGTCTTGTTCAGGCCCCTCAAAGCC +
Preference number: 5 (lower is better)
Translates to: DSTFQLHARLLQLHA*QDFIKFVLFRPLKA
Trigger: GGCTTTGAGGGGCCTGAACAAGACGAATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAGGAGCCTGGCATGGAGCTGGAATGTGGAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 90 bp TTTCATGGTCAGCCAGGGCCCTCGCCCAAAATCCTCCTCCACAGATaGCTGGGAACTAGCAACAATCTCTGTCTGGAATTTAGCCAGAGC +
Preference number: 5 (lower is better)
Translates to: FHGQPGPSPKILLHR*LGTSNNLCLEFSQS
Trigger: GCTCTGGCTAAATTCCAGACAGAGATTGTTGCTAGTTCCCAGGCATCTGTGGAGGAGGATTTTGGGCGAGGGCCCTGGCTGACCATGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp TGTGGAGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTCCTCCAACTCCATGCTaGCCAGGACTTTATCAAATT +
Preference number: 5 (lower is better)
Translates to: CGGAGRHCCGVAPFISSAPPTPC*PGLYQI
Trigger: AATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAGG...AGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCTCCACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AGGGGCAGGCCGCCATTGTTGTGGTGTGGCTCCTTTCATCTCCTCAGCTGTCCACCTCCAACTCCATGCTaGCCAGGACTTTATCAAATT +
Preference number: 5 (lower is better)
Translates to: RGRPPLLWCGSFHLLSCPPPTPC*PGLYQI
Trigger: AATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAGG...TGGACAGCTGAGGAGATGAAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGGGTCCCTCTAGCAGCTaGGAGAGGCTGAAGTGCTTG +
Preference number: 5 (lower is better)
Translates to: GTRKPGPISSKIKLRQERGPSSS*ERLKCL
Trigger: CAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACC...CCTCTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AAAATTAAGCTGAGGCAGGAGAGGGACACCCAAGGCGAGGGTGACAGGCCTTTCACAAGGGAAACGATTTaGAGGGCTGCTCTGAATGGT +
Preference number: 5 (lower is better)
Translates to: KIKLRQERDTQGEGDRPFTRETI*RAALNG
Trigger: ACCATTCAGAGCAGCCCTCAAAATCGTTTCCCTTGT...GAAAGGCCTGTCACCCTCGCCTTGGGTGTCCCTCTCCTGCCTCAGCTTAATTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp CACTCTCCAATCATGCTGGCCTTCTTCTCCCCCTTGGATGTGACCAGACACATGCACTTAACCAGGAACTaGGAGACTGGAATGGCTGAC +
Preference number: 5 (lower is better)
Translates to: HSPIMLAFFSPLDVTRHMHLTRN*ETGMAD
Trigger: GTCAGCCATTCCAGTCTCCAAGTTCCTGGTTAAGTG...CATGTGTCTGGTCACATCCAAGGGGGAGAAGAAGGCCAGCATGATTGGAGAGTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGAGGGGCAGGCCGCCATaGTTGTGGTGTGGCTCCTTT +
Preference number: 5 (lower is better)
Translates to: EGTRKPGPISSKIKLRQERGRPP*LWCGSF
Trigger: AAAGGAGCCACACCACAACAATGGCGGCCTGCCCCT...CTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp AGCAGGAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCCAGAGCACCATGGGTaGGAGTTTGGGGCGCGGAAA +
Preference number: 5 (lower is better)
Translates to: SRRCFISEQGTIGHTSVLPEHHG*EFGARK
Trigger: TTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTGG...CAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTCCTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS GCA 90 bp TTATCAAATTCGTCTTGTTCAGGCCCCTCAAAGCCACCAACTTGCTaGTGTTGGCTCTCAAAGGTGAGTAGGGGGTGTAAGGCTGAGGAC +
Preference number: 5 (lower is better)
Translates to: LSNSSCSGPSKPPTC*CWLSKVSRGCKAED
Trigger: GTCCTCAGCCTTACACCCCCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAGGGGCCTGAACAAGACGAATTTGATAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp GGACTAGGGTATGAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGGGGAAACGGCGAGTTTaGGCTCGGGTGGAGGGATGG +
Preference number: 5 (lower is better)
Translates to: GLGYEGTRKPGPISSKIKGKRRV*ARVEGW
Trigger: CCATCCCTCCACCCGAGCCAAAACTCGCCGTTTCCC...CTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTCATACCCTAGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTGTGGGTTGTCCTGCGTaGGGGCAGTCTCAACTACTG +
Preference number: 5 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPVGCPA*GQSQLL
Trigger: CAGTAGTTGAGACTGCCCCAACGCAGGACAACCCAC...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS GCA 90 bp ACTTTATCAAATTCGTCTTGTTCAGGCCCCTCAAAGCCACCAACTTaGTGCTGTTGGCTCTCAAAGGTGAGTAGGGGGTGTAAGGCTGAG +
Preference number: 5 (lower is better)
Translates to: TLSNSSCSGPSKPPT*CCWLSKVSRGCKAE
Trigger: CTCAGCCTTACACCCCCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAGGGGCCTGAACAAGACGAATTTGATAAAGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 90 bp CCTTTTGGGGTACCAACAGGAGACCCAATGGAAGACACTGGAGCTTaGGGTTGTAAGGGTATCCGAGGAAATAATCCAGAGCTAGTCCTT +
Preference number: 5 (lower is better)
Translates to: PFGVPTGDPMEDTGA*GCKGIRGNNPELVL
Trigger: AAGGACTAGCTCTGGATTATTTCCTCGGATACCCTTACAACCGCAAGCTCCAGTGTCTTCCATTGGGTCTCCTGTTGGTACCCCAAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS-3UTR CAA 90 bp GAAGGGACAAGAAAACCAGGCCCAATATCCTCTAAAATTAAGCTGAGGCAGGAGGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTC +
Preference number: 5 (lower is better)
Translates to: EGTRKPGPISSKIKLRQEAMLGT*FLGSCF
Trigger: GAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGC...CTCCTGCCTCAGCTTAATTTTAGAGGATATTGGGCCTGGTTTTCTTGTCCCTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS-3UTR CAA 90 bp GAGATGCTTTATTTCAGAACAAGGTACAATAGGCCACACCTCTGTCCTGCACCTCTCAAAGCCACCAACTaGCTGCTGTTGGCTCTCAAA +
Preference number: 5 (lower is better)
Translates to: EMLYFRTRYNRPHLCPAPLKATN*LLLALK
Trigger: TTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAG...AGGTGCAGGACAGAGGTGTGGCCTATTGTACCTTGTTCTGAAATAAAGCATCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS TCA 90 bp CAGAATCCGGGCTGTAAATATGGACCAGGTTGTTGGGTGTCACGTTaGGGTAGTGATTTCGAAGTGAAGGAGAAAACACTCCAATCTGCT +
Preference number: 5 (lower is better)
Translates to: QNPGCKYGPGCWVSR*GSDFEVKEKTLQSA
Trigger: AGCAGATTGGAGTGTTTTCTCCTTCACTTCGAAATCACTACCTCAACGTGACACCCAACAACCTGGTCCATATTTACAGCCCGGATTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS CCA 72 bp CAGCTTCTGCAAACTGCACGCCATAGCGACGGCGGGTaGGCCTCGGCGGGGAGGTTGGCCCGGCACCCCGAG +
Preference number: 6 (lower is better)
Translates to: QLLQTARHSDGG*ASAGRLARHPE
Trigger: CTCGGGGTGCCGGGCCAACCTCCCCGCCGAGGCCCACCCGCCGTCGCTATGGCGTGCAGTTTGCAGAAGCTG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS CCA 72 bp TCCGGGGAGTCGCCGGGGCCTTGGACACGACCCAGGTaGAAGTCTCGGACTCCGAGGGACAGTGCTTCCGGG +
Preference number: 6 (lower is better)
Translates to: SGESPGPWTRPR*KSRTPRDSASG
Trigger: CCCGGAAGCACTGTCCCTCGGAGTCCGAGACTTCCACCTGGGTCGTGTCCAAGGCCCCGGCGACTCCCCGGA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS GCA 72 bp ACGACCCAGGTGGAAGTCTCGGACTCCGAGGGACAGTaGTTCCGGGCTGGGGTCAGAGGGATGAGTCTCTGC +
Preference number: 6 (lower is better)
Translates to: TTQVEVSDSEGQ*FRAGVRGMSLC
Trigger: GCAGAGACTCATCCCTCTGACCCCAGCCCGGAAGCACTGTCCCTCGGAGTCCGAGACTTCCACCTGGGTCGT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS GCA 72 bp GGCTGCTGGGGTGTCCGGCTGGCAGCAGTGACTAGCTaGACCAGGTGGTTGGTGACTATGGGTGTCTGCAGA +
Preference number: 6 (lower is better)
Translates to: GCWGVRLAAVTS*TRWLVTMGVCR
Trigger: TCTGCAGACACCCATAGTCACCAACCACCTGGTGCAGCTAGTCACTGCTGCCAGCCGGACACCCCAGCAGCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp ACTTCTCCCACTCTGCTGGTGAGGCAGGATCCCAGCTaGGCCAGGGAAACGGCGAGTTTTGGCTCGGGTGGA +
Preference number: 6 (lower is better)
Translates to: TSPTLLVRQDPS*ARETASFGSGG
Trigger: TCCACCCGAGCCAAAACTCGCCGTTTCCCTGGCCCAGCTGGGATCCTGCCTCACCAGCAGAGTGGGAGAAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CAA 72 bp GTCCGGCTGGCAGCAGTGACTAGCTGCACCAGGTGGTaGGTGACTATGGGTGTCTGCAGAGCTCCCTGGGGA +
Preference number: 6 (lower is better)
Translates to: VRLAAVTSCTRW*VTMGVCRAPWG
Trigger: TCCCCAGGGAGCTCTGCAGACACCCATAGTCACCAACCACCTGGTGCAGCTAGTCACTGCTGCCAGCCGGAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS TCA 72 bp GGAGAGGCATATGCTGAGCCTTCCACGGCCCACTTGTaGCTTCCCAGGTCTCCAAGTGTGCCAGGGCAACCG +
Preference number: 6 (lower is better)
Translates to: GEAYAEPSTAHL*LPRSPSVPGQP
Trigger: CGGTTGCCCTGGCACACTTGGAGACCTGGGAAGTCACAAGTGGGCCGTGGAAGGCTCAGCATATGCCTCTCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588073.1
CDS GCA 72 bp CAGTGCTTCCGGGCTGGGGTCAGAGGGATGAGTCTCTaGGATATAGGGAAAGTCGCCAGGAGACTGGCGGCA +
Preference number: 6 (lower is better)
Translates to: QCFRAGVRGMSL*DIGKVARRLAA
Trigger: TGCCGCCAGTCTCCTGGCGACTTTCCCTATATCGCAGAGACTCATCCCTCTGACCCCAGCCCGGAAGCACTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CCA 72 bp CAGCAGCCTGGAGGACTGTGCCTGCACAGTCTCCTGTaGCCTAGAAGAGACAGGTCTCAGGCGCCCAGCATT +
Preference number: 6 (lower is better)
Translates to: QQPGGLCLHSLL*PRRDRSQAPSI
Trigger: AATGCTGGGCGCCTGAGACCTGTCTCTTCTAGGCCACAGGAGACTGTGCAGGCACAGTCCTCCAGGCTGCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp TTCAGCAGCAGCACTGAGCCAGGCTTCAGCTCATTCTaGCACGTCTCCAGCAGCAACCTGTGCACCGTCCCC +
Preference number: 6 (lower is better)
Translates to: FSSSTEPGFSSF*HVSSSNLCTVP
Trigger: GGGGACGGTGCACAGGTTGCTGCTGGAGACGTGCCAGAATGAGCTGAAGCCTGGCTCAGTGCTGCTGCTGAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS CAA 90 bp GTGCTCCGAGTCAGGGACTTGATCATCACCGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTCAGGGCTGCCTGCTTGCGCAGCACC +
Preference number: 6 (lower is better)
Translates to: VLRVRDLIITAMLGT*FLGSCFRAACLRST
Trigger: GGTGCTGCGCAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGACTCGGAGCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS CCA 72 bp GGAACTAGCAACAATCTGGTGAGGCAGGATCCCAGCTaGGCCAGGGAAACGGCGAGTTTTGGCTCGGGTGGA +
Preference number: 6 (lower is better)
Translates to: GTSNNLVRQDPS*ARETASFGSGG
Trigger: TCCACCCGAGCCAAAACTCGCCGTTTCCCTGGCCCAGCTGGGATCCTGCCTCACCAGATTGTTGCTAGTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588434.1
CDS CAA 90 bp GTGCTCCGAGTCAGGGACTTGATCATCACCGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTCAGGGCTGCCTTGCGCAGCACCATG +
Preference number: 6 (lower is better)
Translates to: VLRVRDLIITAMLGT*FLGSCFRAALRSTM
Trigger: CATGGTGCTGCGCAAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGACTCGGAGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585683.6
CDS TCA 72 bp AGAGACAGGTCTCAGGCGCCCAGCATTCACAGGCAGTaGGCCAGTAAACCGGTTCTCTGCATCCTCCACAGC +
Preference number: 6 (lower is better)
Translates to: RDRSQAPSIHRQ*ASKPVLCILHS
Trigger: GCTGTGGAGGATGCAGAGAACCGGTTTACTGGCTCACTGCCTGTGAATGCTGGGCGCCTGAGACCTGTCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CAA 72 bp AGCTTGGAGAGGCTGAAGTGCTTGAACAGGGGAGCGTaGCGGACAGACTTCCCAGTGGAGTTGCTGAGTGGG +
Preference number: 6 (lower is better)
Translates to: SLERLKCLNRGA*RTDFPVELLSG
Trigger: CCCACTCAGCAACTCCACTGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CAA 72 bp GTCAGGGACTTGATCATCACCGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTCAGGGCTGCCTTGCGC +
Preference number: 6 (lower is better)
Translates to: VRDLIITAMLGT*FLGSCFRAALR
Trigger: GCGCAAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000585683.6
CDS CAA 90 bp GTGCTCCGAGTCAGGGACTTGATCATCACCGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTCAGGGCTGCCTGCTTACAAGGAGAG +
Preference number: 6 (lower is better)
Translates to: VLRVRDLIITAMLGT*FLGSCFRAACLQGE
Trigger: CTCTCCTTGTAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGACTCGGAGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588073.1
CDS GCA 72 bp CTGAATGGTCCCTCTAGCAGCTTGGAGAGGCTGAAGTaGTTGAACAGGGGAGCGTTGCGGACAGACTTCCCA +
Preference number: 6 (lower is better)
Translates to: LNGPSSSLERLK*LNRGALRTDFP
Trigger: TGGGAAGTCTGTCCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACCATTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 72 bp GGGACCTTGTTCCTAGGAAGCTGCTTCAGGGCTGCCTaGTTACAAGGAGAGGCATATGCTGAGCCTTCCACG +
Preference number: 6 (lower is better)
Translates to: GTLFLGSCFRAA*LQGEAYAEPST
Trigger: CGTGGAAGGCTCAGCATATGCCTCTCCTTGTAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000588073.1
CDS CAA 72 bp TCTAGAGACTCATCCTGGGCGGACATGATACCCGCTTaGTGGATGGCAGGCACAGGCCCCTTCTGGCAAGAT +
Preference number: 6 (lower is better)
Translates to: SRDSSWADMIPA*WMAGTGPFWQD
Trigger: ATCTTGCCAGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CAA 72 bp GTCAGGGACTTGATCATCACCGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTCAGGGCTGCCTGCTTG +
Preference number: 6 (lower is better)
Translates to: VRDLIITAMLGT*FLGSCFRAACL
Trigger: CAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000319977.8
CDS CAA 90 bp ATGACAGGATCTAGAGACTCATCCTGGGCGGACATGATACCCGCTTaGTGGATGGCAGGCACAGGCCCCTTCTGGCAAGATCCACTCAGA +
Preference number: 6 (lower is better)
Translates to: MTGSRDSSWADMIPA*WMAGTGPFWQDPLR
Trigger: TCTGAGTGGATCTTGCCAGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGATCCTGTCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CAA 90 bp AGGGAAACGATTTTGAGGGCTGCTCTGAATGGTCCCTCTAGCAGCTaGGAGAGGCTGAAGTGCTTGAACAGGGGAGCGTTGCGGACAGAC +
Preference number: 6 (lower is better)
Translates to: RETILRAALNGPSSS*ERLKCLNRGALRTD
Trigger: GTCTGTCCGCAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACCATTCAGAGCAGCCCTCAAAATCGTTTCCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 72 bp TCATCTTCAAACTCCTCTTCCACAGCAAACAGCTTCTaGAAACTGCACGCCATAGCGACGGCGGGTGGGCCT +
Preference number: 6 (lower is better)
Translates to: SSSNSSSTANSF*KLHAIATAGGP
Trigger: AGGCCCACCCGCCGTCGCTATGGCGTGCAGTTTGCAGAAGCTGTTTGCTGTGGAAGAGGAGTTTGAAGATGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
CDS CCA 72 bp TGTTCAGGCCCCTCAAAGCCACCAACTTGCTGCTGTTaGCTCTCAAAGGTGAGTAGGGGGTGTAAGGCTGAG +
Preference number: 6 (lower is better)
Translates to: CSGPSKPPTCCC*LSKVSRGCKAE
Trigger: CTCAGCCTTACACCCCCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAGGGGCCTGAACA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp ATACCCGCTTTGTGGATGGCAGGCACAGGCCCCTTCTaGCAAGATCCACTCAGATCAACTACCCGGGCTTTT +
Preference number: 6 (lower is better)
Translates to: IPALWMAGTGPF*QDPLRSTTRAF
Trigger: AAAAGCCCGGGTAGTTGATCTGAGTGGATCTTGCCAGAAGGGGCCTGTGCCTGCCATCCACAAAGCGGGTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CAA 72 bp ACCACACTGGCGTCCATTGTGCTCCGAGTCAGGGACTaGATCATCACCGCCATGTTGGGGACCTTGTTCCTA +
Preference number: 6 (lower is better)
Translates to: TTLASIVLRVRD*IITAMLGTLFL
Trigger: TAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGACTCGGAGCACAATGGACGCCAGTGTGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS CAA 72 bp GTCAGGGACTTGATCATCACCGCCATGTTGGGGACCTaGTTCCTAGGAAGCTGCTTCAGGGCTGCCTGCTTA +
Preference number: 6 (lower is better)
Translates to: VRDLIITAMLGT*FLGSCFRAACL
Trigger: TAAGCAGGCAGCCCTGAAGCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000588073.1
CDS CAA 90 bp TCCTTGAAAACCACACTGGCGTCCATTGTGCTCCGAGTCAGGGACTaGATCATCACCGCCATGTTGGGGACCTTGTTCCTAGGAAGCTGC +
Preference number: 6 (lower is better)
Translates to: SLKTTLASIVLRVRD*IITAMLGTLFLGSC
Trigger: GCAGCTTCCTAGGAACAAGGTCCCCAACATGGCGGTGATGATCAAGTCCCTGACTCGGAGCACAATGGACGCCAGTGTGGTTTTCAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS TCA 72 bp AGGAGAAAACACTCCAATCTGCTTCAGCAGCAGCACTaGGCCAGGCTTCAGCTCATTCTGGCACGTCTCCAG +
Preference number: 6 (lower is better)
Translates to: RRKHSNLLQQQH*ARLQLILARLQ
Trigger: CTGGAGACGTGCCAGAATGAGCTGAAGCCTGGCTCAGTGCTGCTGCTGAAGCAGATTGGAGTGTTTTCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS GCA 72 bp TCGTCTTGTTCAGGCCCCTCAAAGCCACCAACTTGCTaGTGTTGGCTCTCAAAGGTGAGTAGGGGGTGTAAG +
Preference number: 6 (lower is better)
Translates to: SSCSGPSKPPTC*CWLSKVSRGCK
Trigger: CTTACACCCCCTACTCACCTTTGAGAGCCAACAGCAGCAAGTTGGTGGCTTTGAGGGGCCTGAACAAGACGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp GTCCTACATTGGATGACAGGATCTAGAGACTCATCCTaGGCGGACATGATACCCGCTTTGTGGATGGCAGGC +
Preference number: 6 (lower is better)
Translates to: VLHWMTGSRDSS*ADMIPALWMAG
Trigger: GCCTGCCATCCACAAAGCGGGTATCATGTCCGCCCAGGATGAGTCTCTAGATCCTGTCATCCAATGTAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp AGCGTTGCGGACAGACTTCCCAGTGGAGTTGCTGAGTaGGAACTGTTAAGGCAGTTGGAACAGGAAGGTGAC +
Preference number: 6 (lower is better)
Translates to: SVADRLPSGVAE*ELLRQLEQEGD
Trigger: GTCACCTTCCTGTTCCAACTGCCTTAACAGTTCCCACTCAGCAACTCCACTGGGAAGTCTGTCCGCAACGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp TGGTGGGTTGTCCTGCGTTGGGGCAGTCTCAACTACTaGTCCCACAGAAGAAGTCTTCAGGAAGCTCACTCA +
Preference number: 6 (lower is better)
Translates to: WWVVLRWGSLNY*SHRRSLQEAHS
Trigger: TGAGTGAGCTTCCTGAAGACTTCTTCTGTGGGACCAGTAGTTGAGACTGCCCCAACGCAGGACAACCCACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS CCA 72 bp GTCTGGAATTTAGCCAGAGCACCATGGGTTGGAGTTTaGGGCGCGGAAACCATGATGTCCTCCAGACTTCTC +
Preference number: 6 (lower is better)
Translates to: VWNLARAPWVGV*GAETMMSSRLL
Trigger: GAGAAGTCTGGAGGACATCATGGTTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTGGCTAAATTCCAGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CCA 72 bp CAGGGCCCTCGCCCAAAATCCTCCTCCACAGATGCCTaGGAACTAGCAACAATCTCTGTCTGGAATTTAGCC +
Preference number: 6 (lower is better)
Translates to: QGPRPKSSSTDA*ELATISVWNLA
Trigger: GGCTAAATTCCAGACAGAGATTGTTGCTAGTTCCCAGGCATCTGTGGAGGAGGATTTTGGGCGAGGGCCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CAA 72 bp ATTTTGAGGGCTGCTCTGAATGGTCCCTCTAGCAGCTaGGAGAGGCTGAAGTGCTTGAACAGGGGAGCGTTG +
Preference number: 6 (lower is better)
Translates to: ILRAALNGPSSS*ERLKCLNRGAL
Trigger: CAACGCTCCCCTGTTCAAGCACTTCAGCCTCTCCAAGCTGCTAGAGGGACCATTCAGAGCAGCCCTCAAAAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CCA 72 bp AATCTCTGTCTGGAATTTAGCCAGAGCACCATGGGTTaGAGTTTGGGGCGCGGAAACCATGATGTCCTCCAG +
Preference number: 6 (lower is better)
Translates to: NLCLEFSQSTMG*SLGRGNHDVLQ
Trigger: CTGGAGGACATCATGGTTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTGGCTAAATTCCAGACAGAGATT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CAA 72 bp TGTCTGGAATTTAGCCAGAGCACCATGGGTTGGAGTTaGGGGCGCGGAAACCATGATGTCCTCCAGACTTCT +
Preference number: 6 (lower is better)
Translates to: CLEFSQSTMGWS*GRGNHDVLQTS
Trigger: AGAAGTCTGGAGGACATCATGGTTTCCGCGCCCCAAACTCCAACCCATGGTGCTCTGGCTAAATTCCAGACA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENST00000319977.8
ENST00000585683.6
CDS CAA 72 bp ACTTGGAGACTGGAATGGCTGACAAGGGAAACGATTTaGAGGGCTGCTCTGAATGGTCCCTCTAGCAGCTTG +
Preference number: 6 (lower is better)
Translates to: TWRLEWLTRETI*RAALNGPSSSL
Trigger: CAAGCTGCTAGAGGGACCATTCAGAGCAGCCCTCAAAATCGTTTCCCTTGTCAGCCATTCCAGTCTCCAAGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS CAA 90 bp GAGTTCGAGGTCTGGGTAAATGAGCTTTGCCACTTAACCAGGAACTaGGAGACTGGAATGGCTGACAAGGGAAACGATTTTGAGGGCTGC +
Preference number: 6 (lower is better)
Translates to: EFEVWVNELCHLTRN*ETGMADKGNDFEGC
Trigger: GCAGCCCTCAAAATCGTTTCCCTTGTCAGCCATTCCAGTCTCCAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCAGACCTCGAACTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS TCA 72 bp GAACAGCTTGAGTTGGGAGTTCGAGGTCTGGGTAAATaGGCTTTGCCACTTAACCAGGAACTTGGAGACTGG +
Preference number: 6 (lower is better)
Translates to: EQLELGVRGLGK*ALPLNQELGDW
Trigger: CCAGTCTCCAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCAGACCTCGAACTCCCAACTCAAGCTGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 72 bp CACATTCCAGCTCCATGCCAGGCTCCTCCAACTCCATaGTTGCCAGGACTTTATCAAATTCGTCTTGTTCAG +
Preference number: 6 (lower is better)
Translates to: HIPAPCQAPPTP*LPGLYQIRLVQ
Trigger: CTGAACAAGACGAATTTGATAAAGTCCTGGCAAGCATGGAGTTGGAGGAGCCTGGCATGGAGCTGGAATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 72 bp GTACCAACAGGAGACCCAATGGAAGACACTGGAGCTTaGGGTTGTAAGGGTATCCGAGGAAATAATCCAGAG +
Preference number: 6 (lower is better)
Translates to: VPTGDPMEDTGA*GCKGIRGNNPE
Trigger: CTCTGGATTATTTCCTCGGATACCCTTACAACCGCAAGCTCCAGTGTCTTCCATTGGGTCTCCTGTTGGTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS GCA 72 bp TTGAGTTGGGAGTTCGAGGTCTGGGTAAATGAGCTTTaGCACTTAACCAGGAACTTGGAGACTGGAATGGCT +
Preference number: 6 (lower is better)
Translates to: LSWEFEVWVNEL*HLTRNLETGMA
Trigger: AGCCATTCCAGTCTCCAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCAGACCTCGAACTCCCAACTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1
CDS TCA 72 bp GTTGTTGGGTGTCACGTTGAGGTAGTGATTTCGAAGTaGAGGAGAAAACACTCCAATCTGCTTCAGCAGCAG +
Preference number: 6 (lower is better)
Translates to: VVGCHVEVVISK*RRKHSNLLQQQ
Trigger: CTGCTGCTGAAGCAGATTGGAGTGTTTTCTCCTTCACTTCGAAATCACTACCTCAACGTGACACCCAACAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS CCA 72 bp TCCTACAAGGAAGCAGAGATGGTAGGTCTTGGCATCTaGAAATCAAGAACCCCTCTGCTTTTACTGTTCAGG +
Preference number: 6 (lower is better)
Translates to: SYKEAEMVGLGI*KSRTPLLLLFR
Trigger: CCTGAACAGTAAAAGCAGAGGGGTTCTTGATTTCCAGATGCCAAGACCTACCATCTCTGCTTCCTTGTAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000588434.1
CDS TCA 72 bp GGCTGTAAATATGGACCAGGTTGTTGGGTGTCACGTTaGGGTAGTGATTTCGAAGTGAAGGAGAAAACACTC +
Preference number: 6 (lower is better)
Translates to: GCKYGPGCWVSR*GSDFEVKEKTL
Trigger: GAGTGTTTTCTCCTTCACTTCGAAATCACTACCTCAACGTGACACCCAACAACCTGGTCCATATTTACAGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588073.1
CDS CAA 72 bp GTCTGGGTAAATGAGCTTTGCCACTTAACCAGGAACTaGGAGACTGGAATGGCTGACAAGGGAAACGATTTT +
Preference number: 6 (lower is better)
Translates to: VWVNELCHLTRN*ETGMADKGNDF
Trigger: AAAATCGTTTCCCTTGTCAGCCATTCCAGTCTCCAAGTTCCTGGTTAAGTGGCAAAGCTCATTTACCCAGAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENST00000245382.6
ENST00000319977.8
ENST00000585683.6
ENST00000588434.1