RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for HRK (Homo sapiens)

Ensembl gene IDs: ENSG00000135116

Ensembl transcript IDs: ENST00000257572.5, ENST00000550505.5, ENST00000552092.1, ENST00000586941.1

Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTaGAGCAGAGCAGTCAGCTCACGAGCGTGGGGGTCCCATGGACTC +
Preference number: 1 (lower is better)
Translates to: PGTSSAVGRPHEGTQ*SRAVSSRAWGSHGL
Trigger: GAGTCCATGGGACCCCCACGCTCGTGAGCTGACTGCTCTGCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp CAGTGGGGCCATGTGCTGGCACTCGCCCTGGAACTAGCAGTGCTGTaGGACGACCTCATGAAGGGACCCAGTGGAGCAGAGCAGTCAGCT +
Preference number: 1 (lower is better)
Translates to: QWGHVLALALELAVL*DDLMKGPSGAEQSA
Trigger: AGCTGACTGCTCTGCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCGAGTGCCAGCACATGGCCCCACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 90 bp CCAGAGGCCTCACTAAGGTTCTCCAGATACCCTCCCAGCCGCCCCTaGCACGCACACGGGCTCCTTGGCGCTTATAGTGCAAAGACCTTC +
Preference number: 1 (lower is better)
Translates to: PEASLRFSRYPPSRP*HAHGLLGAYSAKTF
Trigger: GAAGGTCTTTGCACTATAAGCGCCAAGGAGCCCGTGTGCGTGGCAGGGGCGGCTGGGAGGGTATCTGGAGAACCTTAGTGAGGCCTCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp GACCCAGTGGAGCAGAGCAGTCAGCTCACGAGCGTGGGGGTCCCATaGACTCGAGTCCAAATCTTGGCTCAGGCACTTCGCTGGTGGTGT +
Preference number: 1 (lower is better)
Translates to: DPVEQSSQLTSVGVP*TRVQILAQALRWWC
Trigger: ACACCACCAGCGAAGTGCCTGAGCCAAGATTTGGACTCGAGTCCATGGGACCCCCACGCTCGTGAGCTGACTGCTCTGCTCCACTGGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp GGTGACACTTTTTCCAGTAGACCTAAGTCAGGCCCCGGCTCCCAGTaGGGCCATGTGCTGGCACTCGCCCTGGAACTAGCAGTGCTGTGG +
Preference number: 1 (lower is better)
Translates to: GDTFSSRPKSGPGSQ*GHVLALALELAVLW
Trigger: CCACAGCACTGCTAGTTCCAGGGCGAGTGCCAGCACATGGCCCCACTGGGAGCCGGGGCCTGACTTAGGTCTACTGGAAAAAGTGTCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp GGGTCTAGGACATGCGCACGGCCTAGGACCATGGACAGCAGCCATTaGGGCCAATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACAC +
Preference number: 1 (lower is better)
Translates to: GSRTCARPRTMDSSH*GQWAPQRNFLLKLH
Trigger: GTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCATTGGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTGCGCATGTCCTAGACCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 90 bp CTGCTAACCAGCCTGCTGGACCCTCTGTCTATAGGTACCGGGTGGTaGCCTGCAAATCCAGCCTTGGAGAATGACCGTCCGAATCTGCAG +
Preference number: 1 (lower is better)
Translates to: LLTSLLDPLSIGTGW*PANPALENDRPNLQ
Trigger: CTGCAGATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTACCTATAGACAGAGGGTCCAGCAGGCTGGTTAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 90 bp GGTGGTGACCTGCAAATCCAGCCTTGGAGAATGACCGTCCGAATCTaGAGCCTGACACCTCGCCACCTCGGCTTTGAAAATGGCAGTGTG +
Preference number: 1 (lower is better)
Translates to: GGDLQIQPWRMTVRI*SLTPRHLGFENGSV
Trigger: CACACTGCCATTTTCAAAGCCGAGGTGGCGAGGTGTCAGGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGGTCACCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp GTCCCATGGACTCGAGTCCAAATCTTGGCTCAGGCACTTCGCTGGTaGTGTGGCCTTCAGCTAAGTTGCTTAACCTCTCTGAGCCTCAGC +
Preference number: 1 (lower is better)
Translates to: VPWTRVQILAQALRW*CGLQLSCLTSLSLS
Trigger: GCTGAGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCACACCACCAGCGAAGTGCCTGAGCCAAGATTTGGACTCGAGTCCATGGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp AGTTTCCCCAAATTAAATCAAAAGCACAAGAAAGGCCGGAGCGGCTaGTATTCTGAGGTCAGATGTAGGCTGTTGCTCGCTCCGGCTGGG +
Preference number: 1 (lower is better)
Translates to: SFPKLNQKHKKGRSG*YSEVRCRLLLAPAG
Trigger: CCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGATTTAATTTGGGGAAACT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR TCA 90 bp ACGTGGTCTCTAATAAAACAGGAGAATATCTACAAGGGACTTGGCTaGGAAGCTCTATCAGGAGGTCGTGGGTGCCCCAGTTCTCTCAGC +
Preference number: 1 (lower is better)
Translates to: TWSLIKQENIYKGLG*EALSGGRGCPSSLS
Trigger: GCTGAGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGTTTTATTAGAGACCACGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 90 bp CTTCTCCTGTGTCTACAGGTGGTCAGCATGCCCCCACTACGATCTTaGAGGTACAGCCTTAAAGAAGCAGAGAACTGTGATTGGATACAG +
Preference number: 1 (lower is better)
Translates to: LLLCLQVVSMPPLRS*RYSLKEAENCDWIQ
Trigger: CTGTATCCAATCACAGTTCTCTGCTTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGGGGCATGCTGACCACCTGTAGACACAGGAGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 90 bp GGCAAAAGTCTCTTCATCTCATTATGCAGCAAGCTACCTAAACGATaGTCTCAGAGGCCTCCCTCTGCTTGTACGGTCACACACACACAC +
Preference number: 1 (lower is better)
Translates to: GKSLFISLCSKLPKR*SQRPPSACTVTHTH
Trigger: GTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCTGAGATCATCGTTTAGGTAGCTTGCTGCATAATGAGATGAAGAGACTTTTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 90 bp GTTAAACATCGTGAACCAGACTGGAAAGGAACATTTCACATCATCTaGTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCT +
Preference number: 1 (lower is better)
Translates to: VKHREPDWKGTFHII*FRAGLPLHHPQVKS
Trigger: AGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATGTGAAATGTTCCTTTCCAGTCTGGTTCACGATGTTTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp TGCAGCCTGACACCTCGCCACCTCGGCTTTGAAAATGGCAGTGTGTaGTATCCTGCACAGAGGAAGAATACCTGCTTATGTTGGATTTTT +
Preference number: 1 (lower is better)
Translates to: CSLTPRHLGFENGSV*YPAQRKNTCLCWIF
Trigger: AAAAATCCAACATAAGCAGGTATTCTTCCTCTGTGCAGGATACCACACACTGCCATTTTCAAAGCCGAGGTGGCGAGGTGTCAGGCTGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp GAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTaGGTGCCCCAGTTCTCTCAGCAAAGTGGCTTCATTGAAATCAAA +
Preference number: 1 (lower is better)
Translates to: EYLQGTWLRSSIRRS*VPQFSQQSGFIEIK
Trigger: TTTGATTTCAATGAAGCCACTTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 90 bp AAAGCAGCAAGGACCAGTCTGTTCATGCTGGAAATGAGTCGAGATTaGAGGCTTTTTAACTGCCTTTACCAGATAGCAGGGCTCTCAGTA +
Preference number: 1 (lower is better)
Translates to: KAARTSLFMLEMSRD*RLFNCLYQIAGLSV
Trigger: TACTGAGAGCCCTGCTATCTGGTAAAGGCAGTTAAAAAGCCTGCAATCTCGACTCATTTCCAGCATGAACAGACTGGTCCTTGCTGCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 90 bp AAATACGTGGTCTCTAATAAAACAGGAGAATATCTACAAGGGACTTaGCTGAGAAGCTCTATCAGGAGGTCGTGGGTGCCCCAGTTCTCT +
Preference number: 1 (lower is better)
Translates to: KYVVSNKTGEYLQGT*LRSSIRRSWVPQFS
Trigger: AGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGTTTTATTAGAGACCACGTATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 90 bp AAAAGGAAGACAGAAAGAAATCCAGCTCCCAGCTTGCAGCAGCACTaGGAGGTTGTACATTCTAAAGGACCTGGTCATTTACAGCAAAGC +
Preference number: 1 (lower is better)
Translates to: KRKTERNPAPSLQQH*EVVHSKGPGHLQQS
Trigger: GCTTTGCTGTAAATGACCAGGTCCTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTCTTTCTGTCTTCCTTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCACGGCCTAGGACCATaGACAGCAGCCATTGGGGCC +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSHGLGP*TAAIGA
Trigger: GGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCTGCTAAAGTGGGCATaGGGCATCGCGGAGGGGAAG +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSLLKWA*GIAEGK
Trigger: CTTCCCCTCCGCGATGCCTCATGCCCACTTTAGCAG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTAATCCCCTTGGGGAGTaGAGGAGGCTGTGGGCTGAA +
Preference number: 2 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVNPLGE*RRLWAE
Trigger: TTCAGCCCACAGCCTCCTCCACTCCCCAAGGGGATT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCAGCCATTGGGGCCAATaGGCTCCCCAGAGAAACTTC +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSSHWGQ*APQRNF
Trigger: GAAGTTTCTCTGGGGAGCCCATTGGCCCCAATGGCT...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCTAGACCCCAAGGTTTaGTCCAAACCACCTCTGGAT +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSLDPKV*SKPPLD
Trigger: ATCCAGAGGTGGTTTGGAGCAAACCTTGGGGTCTAG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTGCAGCCAGAGAAAAGTaGGGGAGCGGTGGAGGAGAG +
Preference number: 2 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSAAREK*GSGGGE
Trigger: CTCTCCTCCACCGCTCCCCCACTTTTCTCTGGCTGC...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCAGAAGAGTGTCTAGCTaGTCCCCCAAACCCTTAACC +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSRRVSS*SPKPLT
Trigger: GGTTAAGGGTTTGGGGGACCAGCTAGACACTCTTCT...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCCCCCACTACGATCTTaGAGGTACAGCCTTAAAGAA +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSPPLRS*RYSLKE
Trigger: TTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGGGG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
57% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGCAACCAAGTCATGCATaGGGTCAGCTTTCTGCCTCA +
Preference number: 2 (lower is better)
Translates to: VGILPTALCSPQLSEGPLQPSHA*GQLSAS
Trigger: TGAGGCAGAAAGCTGACCTCATGCATGACTTGGTTG...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTATAATCACTGCTCCCTaGAGAGTCTTTGCAGCCAAG +
Preference number: 2 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVIITAP*RVFAAK
Trigger: CTTGGCTGCAAAGACTCTTCAGGGAGCAGTGATTAT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCAGCTTGCAGCAGCACTaGGAGGTTGTACATTCTAAA +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSSLQQH*EVVHSK
Trigger: TTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCT...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTTCAGGAGGTCGTGGGTaGCCCAGTTCTCTCAGCAAA +
Preference number: 2 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSSGGRG*PSSLSK
Trigger: TTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGA...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGTTGCTCGCTCCGGCTaGGTCTCGGCTCCGGCCCCA +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPVARSG*VSAPAP
Trigger: TGGGGCCGGAGCCGAGACCCAGCCGGAGCGAGCAAC...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACTCCTGTGTCTACAGGTaGTCAGCATGCCCCCACTAC +
Preference number: 2 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHSCVYR*SACPHY
Trigger: GTAGTGGGGGCATGCTGACCACCTGTAGACACAGGA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTTCTATCAGGAGGTCGTaGGTGCCCCAGTTCTCTCAG +
Preference number: 2 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSSIRRS*VPQFSQ
Trigger: CTGAGAGAACTGGGGCACCCACGACCTCCTGATAGA...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCAATCAAAATAAGAAGTaGAGGCTGAGCTCGGTGGCT +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSNQNKK*RLSSVA
Trigger: AGCCACCGAGCTCAGCCTCCACTTCTTATTTTGATT...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGAGGAGGCTGTGGGCTaGACTCCGAGGACACTTTTG +
Preference number: 2 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSEEAVG*TPRTLL
Trigger: CAAAAGTGTCCTCGGAGTTCAGCCCACAGCCTCCTC...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTTCCCTGAAGAGTCTTTaGAGCCAAGTCTCCGTCCAG +
Preference number: 2 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSSLKSL*SQVSVQ
Trigger: CTGGACGGAGACTTGGCTGCAAAGACTCTTCAGGGA...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGATGACCGTCCGAATCTaGAGCCTGACACCTCGCCAC +
Preference number: 2 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTMTVRI*SLTPRH
Trigger: GTGGCGAGGTGTCAGGCTGCAGATTCGGACGGTCAT...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACCACACACACACACACTaGTGTCTGCTGAAACCCGAT +
Preference number: 2 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHHTHTH*CLLKPD
Trigger: ATCGGGTTTCAGCAGACAGCAGTGTGTGTGTGTGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTTCTGGGCTCCCCCTCTaGAAAACGGGAACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSSGLPL*KTGTSF
Trigger: AAAGCTGGTTCCCGTTTTCCAGAGGGGGAGCCCAGA...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCAAGTCTCTTCTGAGATaGAATTCTACAACTGGCACA +
Preference number: 2 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSKSLLR*NSTTGT
Trigger: TGTGCCAGTTGTAGAATTCCATCTCAGAAGAGACTT...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGGGGAATATTACCCACTaGTCTCTGCAGTCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: NQQRQNPERNVPKLIASLGNITH*SLQSPA
Trigger: AGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCC...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGCAGAGAACTGTGATTaGATACAGCTGTGTAGTAAT +
Preference number: 2 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVAENCD*IQLCSN
Trigger: ATTACTACACAGCTGTATCCAATCACAGTTCTCTGC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGTCGCCACCTCGGCTTTaGAAATGGCAGTGTGTGGTA +
Preference number: 2 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTSPPRL*KWQCVV
Trigger: TACCACACACTGCCATTTTCAAAGCCGAGGTGGCGA...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGCAAAGTGGCTTCATTaGAATCAAAATCACCCAAAA +
Preference number: 2 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVAKWLH*NQNHPK
Trigger: TTTTGGGTGATTTTGATTTCAATGAAGCCACTTTGC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCACTGGGGTCTAGGACATaGGCACGGCCTAGGACCATG +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPLGSRT*ARPRTM
Trigger: CATGGTCCTAGGCCGTGCGCATGTCCTAGACCCCAG...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGCTTCCGAGCAGGACTaGCCCTCCACCATCCACAAG +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPASEQD*PSTIHK
Trigger: CTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGC...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGGGCCTTCAGCTAAGTTaGTTAACCTCTCTGAGCCTC +
Preference number: 2 (lower is better)
Translates to: NQQRQNPERNVPKLIASLGLQLS*LTSLSL
Trigger: GAGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCC...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGATCTCTCTTGTCCCCTaGCCTTCCAAGTCTGTCAAC +
Preference number: 2 (lower is better)
Translates to: NQQRQNPERNVPKLIASLISLVP*PSKSVN
Trigger: GTTGACAGACTTGGAAGGCCAGGGGACAAGAGAGAT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCAGCCAACCCCAGCGTTTaGAGTTTGTATCCTCCAGGG +
Preference number: 2 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSANPSV*SLYPPG
Trigger: CCCTGGAGGATACAAACTCCAAACGCTGGGGTTGGC...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTTATCTACAAGGGACTTaGCTGAGAAGCTCTATCAGG +
Preference number: 2 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSYLQGT*LRSSIR
Trigger: CCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATA...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCAAGCGTGGGGGTCCCATaGACTCGAGTCCAAATCTTG +
Preference number: 2 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSSVGVP*TRVQIL
Trigger: CAAGATTTGGACTCGAGTCCATGGGACCCCCACGCT...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTTATTTGCAAATTCCTTaGACCTTCCCCGGGGCCTTA +
Preference number: 2 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSYLQIP*TFPGAL
Trigger: TAAGGCCCCGGGGAAGGTGCAAGGAATTTGCAAATA...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp GAGGAAAACCTTTGCGTGTTGACATGGGAAGATCTCAACCACCATAAAGCGTCTTCTGGGCTCCCCCTCTaGAAAACGGGAACCAGCTTT +
Preference number: 2 (lower is better)
Translates to: EENLCVLTWEDLNHHKASSGLPL*KTGTSF
Trigger: AAAGCTGGTTCCCGTTTTCCAGAGGGGGAGCCCAGA...AGACGCTTTATGGTGGTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR-3UTR CCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGCAATCAGTGAGATGCTaGTGCATTTCATTTAAATGG +
Preference number: 2 (lower is better)
Translates to: VGILPTALCSPQLSEGPLQSVRC*CISFKW
Trigger: CCATTTAAATGAAATGCACCAGCATCTCACTGATTG...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGCTGCAAATCCAGCCTTaGAGAATGACCGTCCGAATC +
Preference number: 2 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTLQIQP*RMTVRI
Trigger: GATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAG...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCATACTTGTGTAGGAGGTaGGTGGGTGAGGACTCCTCT +
Preference number: 2 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSYLCRR*VGEDSS
Trigger: AGAGGAGTCCTCACCCACCCACCTCCTACACAAGTA...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTCTGTGGCTAAGAAAGTaGTTAAATAGAAGCAGTGAC +
Preference number: 2 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSLWLRK*LNRSSD
Trigger: GTCACTGCTTCTATTTAATCACTTTCTTAGCCACAG...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGGCTAATCAAAATCAATaGCTCCTTGGCAGCCAGAGA +
Preference number: 2 (lower is better)
Translates to: NQQRQNPERNVPKLIASLANQNQ*LLGSQR
Trigger: TCTCTGGCTGCCAAGGAGTCATTGATTTTGATTAGC...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGATGAGGTCAGCTTTCTaGCTCATAACCAGCAAGCCT +
Preference number: 2 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTMRSAF*LITSKP
Trigger: AGGCTTGCTGGTTATGAGGCAGAAAGCTGACCTCAT...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGATAGCAACCAAGTCATaGATGAGGTCAGCTTTCTGC +
Preference number: 2 (lower is better)
Translates to: NQQRQNPERNVPKLIASLIATKS*MRSAFC
Trigger: GCAGAAAGCTGACCTCATGCATGACTTGGTTGCTAT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACCACCCCACTATCTCATaGAATCCAAGTAATACAACA +
Preference number: 2 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHHPTIS*NPSNTT
Trigger: TGTTGTATTACTTGGATTGCATGAGATAGTGGGGTG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCATCAGAGGCCTCCCTCTaGTTGTACGGTCACACACAC +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPSEASL*LYGHTH
Trigger: GTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCTGA...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGGACGAGTCAAGAAATaGAGGCATCCCAGACTGCCC +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPGRVKK*RHPRLP
Trigger: GGGCAGTCTGGGATGCCTCCATTTCTTGACTCGTCC...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGGAAAATGGCAGTGTGTaGTATCCTGCACAGAGGAAG +
Preference number: 2 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWENGSV*YPAQRK
Trigger: CTTCCTCTGTGCAGGATACCACACACTGCCATTTTC...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGGCTTCCAGAAAGGACTaGATCTCATTCGGAGTGTTG +
Preference number: 2 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTASRKD*ISFGVL
Trigger: CAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGC...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGAATTTCCTCCCCTCATaGAACTTCCAGTCAGCTCCA +
Preference number: 2 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTNFLPS*NFQSAP
Trigger: TGGAGCTGACTGGAAGTTCCATGAGGGGAGGAAATT...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAGAGATCAGGTGGGGGTaGGAAGCTTCCAGAAAGGAC +
Preference number: 2 (lower is better)
Translates to: MGSPEKLPTQATPITKRIEIRWG*EASRKD
Trigger: GTCCTTTCTGGAAGCTTCTCACCCCCACCTGATCTC...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCATACCGGGTGGTGACCTaGAAATCCAGCCTTGGAGAA +
Preference number: 2 (lower is better)
Translates to: FAFSKFVALWEYYPLLSAYRVVT*KSSLGE
Trigger: TTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTA...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATGAGTGGAGGAGGCTGTaGGCTGAACTCCGAGGACAC +
Preference number: 2 (lower is better)
Translates to: ARKGQDSINTWSLIKQENEWRRL*AELRGH
Trigger: GTGTCCTCGGAGTTCAGCCCACAGCCTCCTCCACTC...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACTAGCAGTGCTGTaGGACGACCTCATGAAGGGA +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPELAVL*DDLMKG
Trigger: TCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTC...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CAA 90 bp AGACAGAAAGAAATCCAGCTCCCAGCTTGCAGCAGCACTGAGAGGTaGTACATTCTAAAGGACCTGGTCATTTACAGCAAAGCCTATGGA +
Preference number: 2 (lower is better)
Translates to: RQKEIQLPACSSTER*YILKDLVIYSKAYG
Trigger: TCCATAGGCTTTGCTGTAAATGACCAGGTCCTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTCTTTCTGTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATTCCGAATCTGCAGCCTaGCACCTCGCCACCTCGGCT +
Preference number: 2 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYSESAA*HLATSA
Trigger: AGCCGAGGTGGCGAGGTGTCAGGCTGCAGATTCGGA...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATTCCAGCCTTGGAGAATaGCCGTCCGAATCTGCAGCC +
Preference number: 2 (lower is better)
Translates to: ARKGQDSINTWSLIKQENSSLGE*PSESAA
Trigger: GGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGA...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGGGGCAGTCGAGAAGTaGACTCCAATGAATGATGTG +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPGAVEK*TPMNDV
Trigger: CACATCATTCATTGGAGTGCACTTCTCGACTGCCCC...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGAAATGAGTCGAGATTaGAGGCTTTTTAACTGCCTT +
Preference number: 2 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSEMSRD*RLFNCL
Trigger: AAGGCAGTTAAAAAGCCTGCAATCTCGACTCATTTC...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR TCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAAGAAGTGCACTCCAATaGATGATGTGCAAGGAAAGG +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPRSALQ*MMCKER
Trigger: CCTTTCCTTGCACATCATTCATTGGAGTGCACTTCT...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCACATACAGGCCCTATTTaGAAATTCCTTGCACCTTCC +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPHTGPI*KFLAPS
Trigger: GGAAGGTGCAAGGAATTTGCAAATAGGGCCTGTATG...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATACCCTGAAATCCCCTTaGGGAGTGGAGGAGGCTGTG +
Preference number: 2 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYTLKSP*GVEEAV
Trigger: CACAGCCTCCTCCACTCCCCAAGGGGATTTCAGGGT...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATTTCAAAGCTGCGGGGTaGGGGAGTCTTCCCTGGCAT +
Preference number: 2 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYFKAAG*GSLPWH
Trigger: ATGCCAGGGAAGACTCCCCCACCCCGCAGCTTTGAA...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCATCTTCACAGACGCTCTaGAGTGAAGCTAATCAAAAT +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPSSQTL*SEANQN
Trigger: ATTTTGATTAGCTTCACTGCAGAGCGTCTGTGAAGA...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAAAGTTCGTAGCTTTGTaGGAATATTACCCACTGCTC +
Preference number: 2 (lower is better)
Translates to: MGSPEKLPTQATPITKRIKFVAL*EYYPLL
Trigger: GAGCAGTGGGTAATATTCCCACAAAGCTACGAACTT...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATGAAGAGACTCTCAAGTaGCACTTTTGCAACTTGTCC +
Preference number: 2 (lower is better)
Translates to: ARKGQDSINTWSLIKQENEETLK*HFCNLS
Trigger: GGACAAGTTGCAAAAGTGCCACTTGAGAGTCTCTTC...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAACTTGTAATATCAGGTaGACACTCAAAAAGTCCACA +
Preference number: 2 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPTCNIR*TLKKST
Trigger: TGTGGACTTTTTGAGTGTCCACCTGATATTACAAGT...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CCA 90 bp AACAGGAAACAATGCAAATGTTCCCAAGGAAGTGACCATATAAGGAAATCCTGGTCTTTGAGTATTGACTaGTTAAATCATACCCATCCT +
Preference number: 2 (lower is better)
Translates to: NRKQCKCSQGSDHIRKSWSLSID*LNHTHP
Trigger: AGGATGGGTATGATTTAACCAGTCAATACTCAAAGA...CCAGGATTTCCTTATATGGTCACTTCCTTGGGAACATTTGCATTGTTTCCTGTT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR-3UTR GCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATCAGAGGAAGAATACCTaGTTATGTTGGATTTTTCGA +
Preference number: 2 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYQRKNT*LCWIFR
Trigger: TCGAAAAATCCAACATAAGCAGGTATTCTTCCTCTG...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp AGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTaGAGCAGAGCAGTCAGCTCACGAGCGTGGGGGTCC +
Preference number: 3 (lower is better)
Translates to: SSAVGRPHEGTQ*SRAVSSRAWGS
Trigger: GGACCCCCACGCTCGTGAGCTGACTGCTCTGCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCATCTCATTCGGAGTGTaGAAGTCCCGGGGGCTCCAG +
Preference number: 3 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSISFGV*KSRGLQ
Trigger: CTGGAGCCCCCGGGACTTCAACACTCCGAATGAGAT...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 72 bp TCACTAAGGTTCTCCAGATACCCTCCCAGCCGCCCCTaGCACGCACACGGGCTCCTTGGCGCTTATAGTGCA +
Preference number: 3 (lower is better)
Translates to: SLRFSRYPPSRP*HAHGLLGAYSA
Trigger: TGCACTATAAGCGCCAAGGAGCCCGTGTGCGTGGCAGGGGCGGCTGGGAGGGTATCTGGAGAACCTTAGTGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp GAGCAGAGCAGTCAGCTCACGAGCGTGGGGGTCCCATaGACTCGAGTCCAAATCTTGGCTCAGGCACTTCGC +
Preference number: 3 (lower is better)
Translates to: EQSSQLTSVGVP*TRVQILAQALR
Trigger: GCGAAGTGCCTGAGCCAAGATTTGGACTCGAGTCCATGGGACCCCCACGCTCGTGAGCTGACTGCTCTGCTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp CATGTGCTGGCACTCGCCCTGGAACTAGCAGTGCTGTaGGACGACCTCATGAAGGGACCCAGTGGAGCAGAG +
Preference number: 3 (lower is better)
Translates to: HVLALALELAVL*DDLMKGPSGAE
Trigger: CTCTGCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCGAGTGCCAGCACATG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGAGGCCTCCCTCTGCTaGTACGGTCACACACACACA +
Preference number: 3 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVEASLC*YGHTHT
Trigger: TGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp ACATGCGCACGGCCTAGGACCATGGACAGCAGCCATTaGGGCCAATGGGCTCCCCAGAGAAACTTCCTACTC +
Preference number: 3 (lower is better)
Translates to: TCARPRTMDSSH*GQWAPQRNFLL
Trigger: GAGTAGGAAGTTTCTCTGGGGAGCCCATTGGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTGCGCATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCTGGCCTTCAGCTAAGTaGCTTAACCTCTCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSWPSAK*LNLSEP
Trigger: AGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCA...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp AGCCTGCTGGACCCTCTGTCTATAGGTACCGGGTGGTaGCCTGCAAATCCAGCCTTGGAGAATGACCGTCCG +
Preference number: 3 (lower is better)
Translates to: SLLDPLSIGTGW*PANPALENDRP
Trigger: CGGACGGTCATTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTACCTATAGACAGAGGGTCCAGCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp AAGCTTCCAGAAAGGACTGGATCTCATTCGGAGTGTTaGAGTCCCGGGGGCTCCAGTCCCAGCGGTTCCTGG +
Preference number: 3 (lower is better)
Translates to: KLPERTGSHSEC*SPGGSSPSGSW
Trigger: CCAGGAACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGCTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp CGGCCTAGGACCATGGACAGCAGCCATTGGGGCCAATaGGCTCCCCAGAGAAACTTCCTACTCAAGCTACAC +
Preference number: 3 (lower is better)
Translates to: RPRTMDSSHWGQ*APQRNFLLKLH
Trigger: GTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCATTGGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTGGAGAGGGAGGGATGTaGCCAGCACTTTGCACACTG +
Preference number: 3 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSGEGGM*PALCTL
Trigger: CAGTGTGCAAAGTGCTGGCAACATCCCTCCCTCTCC...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACCCTAGACCCCAAGGTTaGCTCCAAACCACCTCTGGA +
Preference number: 3 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHPRPQG*LQTTSG
Trigger: TCCAGAGGTGGTTTGGAGCAAACCTTGGGGTCTAGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp CCGAATCTGCAGCCTGACACCTCGCCACCTCGGCTTTaGAAATGGCAGTGTGTGGTATCCTGCACAGAGGAA +
Preference number: 3 (lower is better)
Translates to: PNLQPDTSPPRL*KWQCVVSCTEE
Trigger: TTCCTCTGTGCAGGATACCACACACTGCCATTTTCAAAGCCGAGGTGGCGAGGTGTCAGGCTGCAGATTCGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp CCACTGTCCCTAAAAGATACTTGTGTAGGAGGTGGGTaGGTGAGGACTCCTCTAATGCCCCAGGGAGGGAGA +
Preference number: 3 (lower is better)
Translates to: PLSLKDTCVGGG*VRTPLMPQGGR
Trigger: TCTCCCTCCCTGGGGCATTAGAGGAGTCCTCACCCACCCACCTCCTACACAAGTATCTTTTAGGGACAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 72 bp CTCTCAATGCCATCCTCCCTCCTAGACCCCAAGGTTTaGTCCAAACCACCTCTGGATATTCGTCCCCAGGTA +
Preference number: 3 (lower is better)
Translates to: LSMPSSLLDPKV*SKPPLDIRPQV
Trigger: TACCTGGGGACGAATATCCAGAGGTGGTTTGGAGCAAACCTTGGGGTCTAGGAGGGAGGATGGCATTGAGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 72 bp CTGCAAATCCAGCCTTGGAGAATGACCGTCCGAATCTaGAGCCTGACACCTCGCCACCTCGGCTTTGAAAAT +
Preference number: 3 (lower is better)
Translates to: LQIQPWRMTVRI*SLTPRHLGFEN
Trigger: ATTTTCAAAGCCGAGGTGGCGAGGTGTCAGGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 72 bp GTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTaGAGTCCCCAGCTAAGCGAGGGTCCCCTGCAAACA +
Preference number: 3 (lower is better)
Translates to: VRSFVGILPTAL*SPQLSEGPLQT
Trigger: TGTTTGCAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp CAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTaGGTGCCCCAGTTCTCTCAGCAAAGTGGCTTCATT +
Preference number: 3 (lower is better)
Translates to: QGTWLRSSIRRS*VPQFSQQSGFI
Trigger: AATGAAGCCACTTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 72 bp CGTGAACCAGACTGGAAAGGAACATTTCACATCATCTaGTTCCGAGCAGGACTGCCCCTCCACCATCCACAA +
Preference number: 3 (lower is better)
Translates to: REPDWKGTFHII*FRAGLPLHHPQ
Trigger: TTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATGTGAAATGTTCCTTTCCAGTCTGGTTCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp AGTCCAAATCTTGGCTCAGGCACTTCGCTGGTGGTGTaGCCTTCAGCTAAGTTGCTTAACCTCTCTGAGCCT +
Preference number: 3 (lower is better)
Translates to: SPNLGSGTSLVV*PSAKLLNLSEP
Trigger: AGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCACACCACCAGCGAAGTGCCTGAGCCAAGATTTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTAGCAGCACTGAGAGGTaGTACATTCTAAAGGACCTG +
Preference number: 3 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSSSTER*YILKDL
Trigger: CAGGTCCTTTAGAATGTACAACCTCTCAGTGCTGCT...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGCCTGCAAATCCAGCCTaGGAGAATGACCGTCCGAAT +
Preference number: 3 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWPANPA*ENDRPN
Trigger: ATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGG...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTATATCTACAAGGGACTaGGCTGAGAAGCTCTATCAG +
Preference number: 3 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSISTRD*AEKLYQ
Trigger: CTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATAT...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR GCA 72 bp CCTTTCATCTTCTCCTGTGTCTACAGGTGGTCAGCATaGCCCCACTACGATCTTGAAGGTACAGCCTTAAAG +
Preference number: 3 (lower is better)
Translates to: PFIFSCVYRWSA*PHYDLEGTALK
Trigger: CTTTAAGGCTGTACCTTCAAGATCGTAGTGGGGGCATGCTGACCACCTGTAGACACAGGAGAAGATGAAAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTTTCAGGAGAAGAAACTaGGGAGTTCAGGTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSFRRRN*GVQVGE
Trigger: TTCTCCAACCTGAACTCCCAAGTTTCTTCTCCTGAA...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp TGTCTACAGGTGGTCAGCATGCCCCCACTACGATCTTaGAGGTACAGCCTTAAAGAAGCAGAGAACTGTGAT +
Preference number: 3 (lower is better)
Translates to: CLQVVSMPPLRS*RYSLKEAENCD
Trigger: ATCACAGTTCTCTGCTTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGGGGCATGCTGACCACCTGTAGACA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp CTAATAAAACAGGAGAATATCTACAAGGGACTTGGCTaGGAAGCTCTATCAGGAGGTCGTGGGTGCCCCAGT +
Preference number: 3 (lower is better)
Translates to: LIKQENIYKGLG*EALSGGRGCPS
Trigger: ACTGGGGCACCCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGTTTTATTAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp CTCTTCATCTCATTATGCAGCAAGCTACCTAAACGATaGTCTCAGAGGCCTCCCTCTGCTTGTACGGTCACA +
Preference number: 3 (lower is better)
Translates to: LFISLCSKLPKR*SQRPPSACTVT
Trigger: TGTGACCGTACAAGCAGAGGGAGGCCTCTGAGATCATCGTTTAGGTAGCTTGCTGCATAATGAGATGAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACTTTCTATCATGCCTTTaGCACTGTTACCTCTTATTC +
Preference number: 3 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHFLSCL*HCYLLF
Trigger: GAATAAGAGGTAACAGTGCAAAAGGCATGATAGAAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCACCCAGCGTTTGGAGTTaGTATCCTCCAGGGGAAACA +
Preference number: 3 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPPSVWS*YPPGET
Trigger: TGTTTCCCCTGGAGGATACAAACTCCAAACGCTGGG...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATATGCCAACCCCAGCGTTaGGAGTTTGTATCCTCCAGG +
Preference number: 3 (lower is better)
Translates to: MGSPEKLPTQATPITKRICQPQR*EFVSSR
Trigger: CCTGGAGGATACAAACTCCAAACGCTGGGGTTGGCA...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCAAGAGATTGTATTTGTTaGTGGGAGATCAGGTGGGGG +
Preference number: 3 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSRDCIC*WEIRWG
Trigger: CCCCCACCTGATCTCCCACAAACAAATACAATCTCT...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp AGAGATTGTATTTGTTTGTGGGAGATCAGGTGGGGGTaGGAAGCTTCCAGAAAGGACTGGATCTCATTCGGA +
Preference number: 3 (lower is better)
Translates to: RDCICLWEIRWG*EASRKDWISFG
Trigger: TCCGAATGAGATCCAGTCCTTTCTGGAAGCTTCTCACCCCCACCTGATCTCCCACAAACAAATACAATCTCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp AAATTAAATCAAAAGCACAAGAAAGGCCGGAGCGGCTaGTATTCTGAGGTCAGATGTAGGCTGTTGCTCGCT +
Preference number: 3 (lower is better)
Translates to: KLNQKHKKGRSG*YSEVRCRLLLA
Trigger: AGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGATTTAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR-3UTR CAA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGAATTCCCACCAGTCTTaGCAAATAGTTTCTAAGTAC +
Preference number: 3 (lower is better)
Translates to: NQQRQNPERNVPKLIASLNSHQS*QIVSKY
Trigger: GTACTTAGAAACTATTTGCAAAGACTGGTGGGAATT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATCTCGCCACCTCGGCTTaGAAAATGGCAGTGTGTGGT +
Preference number: 3 (lower is better)
Translates to: ARKGQDSINTWSLIKQENLATSA*KMAVCG
Trigger: ACCACACACTGCCATTTTCAAAGCCGAGGTGGCGAG...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp ACAGAAAGAAATCCAGCTCCCAGCTTGCAGCAGCACTaGGAGGTTGTACATTCTAAAGGACCTGGTCATTTA +
Preference number: 3 (lower is better)
Translates to: TERNPAPSLQQH*EVVHSKGPGHL
Trigger: TAAATGACCAGGTCCTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTCTTTCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp GTAAAGCAGCAAGGACCAGTCTGTTCATGCTGGAAATaGGTCGAGATTGCAGGCTTTTTAACTGCCTTTACC +
Preference number: 3 (lower is better)
Translates to: VKQQGPVCSCWK*VEIAGFLTAFT
Trigger: GGTAAAGGCAGTTAAAAAGCCTGCAATCTCGACTCATTTCCAGCATGAACAGACTGGTCCTTGCTGCTTTAC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp TCTAATGAATTTGCCTTCTCTAAGTTCGTAGCTTTGTaGGAATATTACCCACTGCTCTCTGCAGTCCCCAGC +
Preference number: 3 (lower is better)
Translates to: SNEFAFSKFVAL*EYYPLLSAVPS
Trigger: GCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAATTCATTAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp AAAAATCGGGGCAGTCGAGAAGTGCACTCCAATGAATaGTGTGCAAGGAAAGGTCAGGATTCGATAAATACG +
Preference number: 3 (lower is better)
Translates to: KNRGSREVHSNE*CARKGQDSINT
Trigger: CGTATTTATCGAATCCTGACCTTTCCTTGCACATCATTCATTGGAGTGCACTTCTCGACTGCCCCGATTTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp TGTCAAAAATCGGGGCAGTCGAGAAGTGCACTCCAATaGATGATGTGCAAGGAAAGGTCAGGATTCGATAAA +
Preference number: 3 (lower is better)
Translates to: CQKSGQSRSALQ*MMCKERSGFDK
Trigger: TTTATCGAATCCTGACCTTTCCTTGCACATCATTCATTGGAGTGCACTTCTCGACTGCCCCGATTTTTGACA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp GTAATATCAGGTGGACACTCAAAAAGTCCACAATGGTaGGCCACTGTCCCTAAAAGATACTTGTGTAGGAGG +
Preference number: 3 (lower is better)
Translates to: VISGGHSKSPQW*ATVPKRYLCRR
Trigger: CCTCCTACACAAGTATCTTTTAGGGACAGTGGCTCACCATTGTGGACTTTTTGAGTGTCCACCTGATATTAC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CCA 72 bp ATCTGTGTTCTGGTCAATGCAACTTGTAATATCAGGTaGACACTCAAAAAGTCCACAATGGTGAGCCACTGT +
Preference number: 3 (lower is better)
Translates to: ICVLVNATCNIR*TLKKSTMVSHC
Trigger: ACAGTGGCTCACCATTGTGGACTTTTTGAGTGTCCACCTGATATTACAAGTTGCATTGACCAGAACACAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATTCAGCAGCCCTGGGGTaGCATTTCTCTTTAAAGGGC +
Preference number: 3 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYSAALG*HFSLKG
Trigger: GCCCTTTAAAGAGAAATGCAACCCCAGGGCTGCTGA...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAGATGTTGCCAGCACTTaGCACACTGTGGAAATATTT +
Preference number: 3 (lower is better)
Translates to: MGSPEKLPTQATPITKRIDVAST*HTVEIF
Trigger: AAATATTTCCACAGTGTGCAAAGTGCTGGCAACATC...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCATTGAAGAGATTGTATTaGTTTGTGGGAGATCAGGTG +
Preference number: 3 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPLKRLY*FVGDQV
Trigger: CACCTGATCTCCCACAAACAAATACAATCTCTTCAA...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR-3UTR CAA 90 bp GAGGAAAACCTTTGCGTGTTGACATGGGAAGATCTCAACCACCATAAAGCGTCTCTCTCTCCTGTATCTTaGAGTATTGACTGGTTAAAT +
Preference number: 3 (lower is better)
Translates to: EENLCVLTWEDLNHHKASLSPVS*SIDWLN
Trigger: ATTTAACCAGTCAATACTCAAAGATACAGGAGAGAG...AGACGCTTTATGGTGGTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR GCA 72 bp CATCATGCAGCCATTAAAAAGGATGAGGAAAACCTTTaGGTGTTGACATGGGAAGATCTCAACCACCATAAA +
Preference number: 3 (lower is better)
Translates to: HHAAIKKDEENL*VLTWEDLNHHK
Trigger: TTTATGGTGGTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTCATCCTTTTTAATGGCTGCATGATG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR-3UTR CAA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATTCTAAGTTCGTAGCTTaGTGGGAATATTACCCACTG +
Preference number: 3 (lower is better)
Translates to: ARKGQDSINTWSLIKQENSKFVA*WEYYPL
Trigger: CAGTGGGTAATATTCCCACAAAGCTACGAACTTAGA...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR TCA 72 bp AGAAAACAGGAAACAATGCAAATGTTCCCAAGGAAGTaGCCATATAAGGAAATCCTGGTTCATCCAAGCAAC +
Preference number: 3 (lower is better)
Translates to: RKQETMQMFPRK*PYKEILVHPSN
Trigger: GTTGCTTGGATGAACCAGGATTTCCTTATATGGTCACTTCCTTGGGAACATTTGCATTGTTTCCTGTTTTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR TCA 72 bp GGGAGCTGGAAAGACCCTAGTCTGTGGCTAAGAAAGTaGTTAAATAGAAGCAGTGACTGTATTTCATATTAT +
Preference number: 3 (lower is better)
Translates to: GSWKDPSLWLRK*LNRSSDCISYY
Trigger: ATAATATGAAATACAGTCACTGCTTCTATTTAATCACTTTCTTAGCCACAGACTAGGGTCTTTCCAGCTCCC
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTCCTCCCAGCCGCCCCTaGCACGCACACGGGCTCCTT +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVPPSRP*HAHGLL
Trigger: AAGGAGCCCGTGTGCGTGGCAGGGGCGGCTGGGAGG...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GGAGCGGCTGGTATTCTGAGGTCAGATGTAGGCTGTTGCTCGCTCCGGCTGGGTGTTGCTCGCTCCGGCTaGGTCTCGGCTCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: GAAGILRSDVGCCSLRLGVARSG*VSAPAP
Trigger: TGGGGCCGGAGCCGAGACCCAGCCGGAGCGAGCAAC...ACCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR TCA 90 bp TGTTGCTCGCTCCGGCTGGGTCTCGGCTCCGGCCCCACCAAGAAGCCCCGCGTTCAACCAGCCTGTCCTTaGGTGTCCCCAAAGGTGACA +
Preference number: 4 (lower is better)
Translates to: CCSLRLGLGSGPTKKPRVQPACP*VSPKVT
Trigger: TGTCACCTTTGGGGACACTCAAGGACAGGCTGGTTG...AACGCGGGGCTTCTTGGTGGGGCCGGAGCCGAGACCCAGCCGGAGCGAGCAACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCACATGGTGCGCTGGTaGAGCTCGTCGCCTAGCGCC +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSHMVRW*SSSPSA
Trigger: GGCGCTAGGCGACGAGCTGCACCAGCGCACCATGTG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp TGTTGCTCGCTCCGGCTGGGTCTCGGCTCCGGCCCCACCAAGAAGCCCCGCGTTATCTCTCTTGTCCCCTaGCCTTCCAAGTCTGTCAAC +
Preference number: 4 (lower is better)
Translates to: CCSLRLGLGSGPTKKPRVISLVP*PSKSVN
Trigger: GTTGACAGACTTGGAAGGCCAGGGGACAAGAGAGAT...AACGCGGGGCTTCTTGGTGGGGCCGGAGCCGAGACCCAGCCGGAGCGAGCAACA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp TGTTGCTCGCTCCGGCTGGGTCTCGGCTCCGGCCCCACCAAGAAGCCCCGCGTTCCCCCACTACGATCTTaGAGGTACAGCCTTAAAGAA +
Preference number: 4 (lower is better)
Translates to: CCSLRLGLGSGPTKKPRVPPLRS*RYSLKE
Trigger: TTCTTTAAGGCTGTACCTTCAAGATCGTAGTGGGGG...AACGCGGGGCTTCTTGGTGGGGCCGGAGCCGAGACCCAGCCGGAGCGAGCAACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGAGGAGGCTGTGGGCTaGACTCCGAGGACACTTTTG +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVEEAVG*TPRTLL
Trigger: CAAAAGTGTCCTCGGAGTTCAGCCCACAGCCTCCTC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTTCTCATTCGGAGTGTTaGAGTCCCGGGGGCTCCAGT +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVSHSEC*SPGGSS
Trigger: ACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGA...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACCGCCACATGGTGCGCTaGTGCAGCTCGTCGCCTAGC +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHRHMVR*CSSSPS
Trigger: GCTAGGCGACGAGCTGCACCAGCGCACCATGTGGCG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACTCCGAATCTGCAGCCTaGCACCTCGCCACCTCGGCT +
Preference number: 4 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYSESAA*HLATSA
Trigger: AGCCGAGGTGGCGAGGTGTCAGGCTGCAGATTCGGA...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGAGATCAGGTGGGGGTaGGAAGCTTCCAGAAAGGAC +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVEIRWG*EASRKD
Trigger: GTCCTTTCTGGAAGCTTCTCACCCCCACCTGATCTC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGGGCGCCGCCACATGGTaGGCTGGTGCAGCTCGTCGC +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWGAATW*AGAARR
Trigger: GCGACGAGCTGCACCAGCGCACCATGTGGCGGCGCC...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTAGCGTGGGGGTCCCATaGACTCGAGTCCAAATCTTG +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVSVGVP*TRVQIL
Trigger: CAAGATTTGGACTCGAGTCCATGGGACCCCCACGCT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCTACAAGGGACTTGGCTaGGAAGCTCTATCAGGAGGT +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSYKGLG*EALSGG
Trigger: ACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTA...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGTCAGGAGGTCGTGGGTaGCCCAGTTCTCTCAGCAAA +
Preference number: 4 (lower is better)
Translates to: VGILPTALCSPQLSEGPLSGGRG*PSSLSK
Trigger: TTTGCTGAGAGAACTGGGGCACCCACGACCTCCTGA...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACCTGGGAGGTGGAGGTTaGAGTGAGCTGAGCTCGCAC +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHLGGGG*SELSSH
Trigger: GTGCGAGCTCAGCTCACTGCAACCTCCACCTCCCAG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTCCCAGTGGGGCCATGTaGTGGCACTCGCCCTGGAAC +
Preference number: 4 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSPSGAM*WHSPWN
Trigger: GTTCCAGGGCGAGTGCCAGCACATGGCCCCACTGGG...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CAA 72 bp GAAGCTTCCAGAAAGGACTGGATCTCATTCGGAGTGTaGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTCCTG +
Preference number: 4 (lower is better)
Translates to: EASRKDWISFGV*KSRGLQSQRFL
Trigger: CAGGAACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGCTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGCCTACAAGTTCCGCCTaGCGAGCAGCCAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTPTSSA*RAARPP
Trigger: TGGCGGCCTGGCTGCTCGGCAGGCGGAACTTGTAGG...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACACCCTGAAATCCCCTTaGGGAGTGGAGGAGGCTGTG +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHTLKSP*GVEEAV
Trigger: CACAGCCTCCTCCACTCCCCAAGGGGATTTCAGGGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGTACTTGTGTAGGAGGTaGGTGGGTGAGGACTCCTCT +
Preference number: 4 (lower is better)
Translates to: VGILPTALCSPQLSEGPLYLCRR*VGEDSS
Trigger: AGAGGAGTCCTCACCCACCCACCTCCTACACAAGTA...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACCCCAGTGCTTGGGAGTaGCGAGCACGCCATAAAAGG +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHPSAWE*RARHKR
Trigger: CCTTTTATGGCGTGCTCGCCACTCCCAAGCACTGGG...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCGAAGAGACTCTCAAGTaGCACTTTTGCAACTTGTCC +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSEETLK*HFCNLS
Trigger: GGACAAGTTGCAAAAGTGCCACTTGAGAGTCTCTTC...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGGAGTGGAGGAGGCTGTaGGCTGAACTCCGAGGACAC +
Preference number: 4 (lower is better)
Translates to: NQQRQNPERNVPKLIASLEWRRL*AELRGH
Trigger: GTGTCCTCGGAGTTCAGCCCACAGCCTCCTCCACTC...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACTCTATCAGGAGGTCGTaGGTGCCCCAGTTCTCTCAG +
Preference number: 4 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYSIRRS*VPQFSQ
Trigger: CTGAGAGAACTGGGGCACCCACGACCTCCTGATAGA...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCTATCTACAAGGGACTTaGCTGAGAAGCTCTATCAGG +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSYLQGT*LRSSIR
Trigger: CCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATA...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGATGGACAGCAGCCATTaGGGCCAATGGGCTCCCCAG +
Preference number: 4 (lower is better)
Translates to: NQQRQNPERNVPKLIASLMDSSH*GQWAPQ
Trigger: CTGGGGAGCCCATTGGCCCCAATGGCTGCTGTCCAT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTAATTTCCTCCCCTCATaGAACTTCCAGTCAGCTCCA +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVNFLPS*NFQSAP
Trigger: TGGAGCTGACTGGAAGTTCCATGAGGGGAGGAAATT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTTCTGCCAGCAAAGCTTaGGGTCACAGTGGTGACCTG +
Preference number: 4 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSSASKA*GHSGDL
Trigger: CAGGTCACCACTGTGACCCCAAGCTTTGCTGGCAGA...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACAGCTTATTGCCTCTCTaGCTAGGCCAGAGGCCTCAC +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHSLLPL*LGQRPH
Trigger: GTGAGGCCTCTGGCCTAGCCAGAGAGGCAATAAGCT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTTCCAGCCTTGGAGAATaGCCGTCCGAATCTGCAGCC +
Preference number: 4 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSSSLGE*PSESAA
Trigger: GGCTGCAGATTCGGACGGTCATTCTCCAAGGCTGGA...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTAGCTTGCAGCAGCACTaGGAGGTTGTACATTCTAAA +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVSLQQH*EVVHSK
Trigger: TTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTAGAAGTGCACTCCAATaGATGATGTGCAAGGAAAGG +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVRSALQ*MMCKER
Trigger: CCTTTCCTTGCACATCATTCATTGGAGTGCACTTCT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGCTAATCAAAATCAATaGCTCCTTGGCAGCCAGAGA +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVANQNQ*LLGSQR
Trigger: TCTCTGGCTGCCAAGGAGTCATTGATTTTGATTAGC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGCTGCTAAAGTGGGCATaGGGCATCGCGGAGGGGAAG +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWLLKWA*GIAEGK
Trigger: CTTCCCCTCCGCGATGCCTCATGCCCACTTTAGCAG...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACTACCGGGTGGTGACCTaGAAATCCAGCCTTGGAGAA +
Preference number: 4 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYYRVVT*KSSLGE
Trigger: TTCTCCAAGGCTGGATTTGCAGGTCACCACCCGGTA...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTGGGAATATTACCCACTaGTCTCTGCAGTCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSGNITH*SLQSPA
Trigger: AGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCC...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGCTGGGGTCTAGGACATaGGCACGGCCTAGGACCATG +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWLGSRT*ARPRTM
Trigger: CATGGTCCTAGGCCGTGCGCATGTCCTAGACCCCAG...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGTATTTGCAAATTCCTTaGACCTTCCCCGGGGCCTTA +
Preference number: 4 (lower is better)
Translates to: VGILPTALCSPQLSEGPLYLQIP*TFPGAL
Trigger: TAAGGCCCCGGGGAAGGTGCAAGGAATTTGCAAATA...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGGAAAATGGCAGTGTGTaGTATCCTGCACAGAGGAAG +
Preference number: 4 (lower is better)
Translates to: VGILPTALCSPQLSEGPLENGSV*YPAQRK
Trigger: CTTCCTCTGTGCAGGATACCACACACTGCCATTTTC...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCATCGTGAACCAGACTaGAAAGGAACATTTCACATC +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSHREPD*KGTFHI
Trigger: GATGTGAAATGTTCCTTTCCAGTCTGGTTCACGATG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CACAAGAAAGGCCGGAGCGGCTGGTATTCTGAGGTCAGATGTAGGCTGTTGCTCAAAGGCCGGAGCGGCTaGTATTCTGAGGTCAGATGT +
Preference number: 4 (lower is better)
Translates to: HKKGRSGWYSEVRCRLLLKGRSG*YSEVRC
Trigger: ACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTT...GAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR TCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGAAAAGTCCACAATGGTaGGCCACTGTCCCTAAAAGA +
Preference number: 4 (lower is better)
Translates to: VGILPTALCSPQLSEGPLKSPQW*ATVPKR
Trigger: TCTTTTAGGGACAGTGGCTCACCATTGTGGACTTTT...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AAATTAAATCAAAAGCACAAGAAAGGCCGGAGCGGCTGGTATTCTGAGGTCAGACCTACAAGTTCCGCCTaGCGAGCAGCCAGGCCGCCA +
Preference number: 4 (lower is better)
Translates to: KLNQKHKKGRSGWYSEVRPTSSA*RAARPP
Trigger: TGGCGGCCTGGCTGCTCGGCAGGCGGAACTTGTAGG...TCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGATTTAATTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR GCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACTACAGGTGGTCAGCATaGCCCCACTACGATCTTGAA +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHYRWSA*PHYDLE
Trigger: TTCAAGATCGTAGTGGGGGCATGCTGACCACCTGTA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACACATTTCACATCATCTaGTTCCGAGCAGGACTGCCC +
Preference number: 4 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHTFHII*FRAGLP
Trigger: GGGCAGTCCTGCTCGGAAGCAGATGATGTGAAATGT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGTTCAAAGCTGCGGGGTaGGGGAGTCTTCCCTGGCAT +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWFKAAG*GSLPWH
Trigger: ATGCCAGGGAAGACTCCCCCACCCCGCAGCTTTGAA...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AGCGGCTGGTATTCTGAGGTCAGATGTAGGCTGTTGCTCGCTCCGGCTGGGTCTCTTTGCGTGTTGACATaGGAAGATCTCAACCACCAT +
Preference number: 4 (lower is better)
Translates to: SGWYSEVRCRLLLAPAGSLCVLT*EDLNHH
Trigger: ATGGTGGTTGAGATCTTCCCATGTCAACACGCAAAG...AGACCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR TCA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGCACAGGGTTAGGGCATaGGTATATAAAATCCACAAC +
Preference number: 4 (lower is better)
Translates to: VGILPTALCSPQLSEGPLHRVRA*VYKIHN
Trigger: GTTGTGGATTTTATATACTCATGCCCTAACCCTGTG...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATGTTGCTCGCTCCGGCTaGGTCTCGGCTCCGGCCCCA +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENVARSG*VSAPAP
Trigger: TGGGGCCGGAGCCGAGACCCAGCCGGAGCGAGCAAC...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGCATGAAGGGACCCAGTaGAGCAGAGCAGTCAGCTCA +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWHEGTQ*SRAVSS
Trigger: TGAGCTGACTGCTCTGCTCCACTGGGTCCCTTCATG...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GAGGAAAACCTTTGCGTGTTGACATGGGAAGATCTCAACCACCATAAAGCGTCTCAGAGGAGCCTCCCCTaGGGCTCAGAGCTGGGAAAA +
Preference number: 4 (lower is better)
Translates to: EENLCVLTWEDLNHHKASQRSLP*GSELGK
Trigger: TTTTCCCAGCTCTGAGCCCCAGGGGAGGCTCCTCTG...AGACGCTTTATGGTGGTTGAGATCTTCCCATGTCAACACGCAAAGGTTTTCCTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR TCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTTTTAAAATGACACTTTaGCATCAATTTCCTCCCCTC +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVFKMTL*HQFPPL
Trigger: GAGGGGAGGAAATTGATGTCAAAGTGTCATTTTAAA...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTTGTTCATGCTGGAAATaGGTCGAGATTGCAGGCTTT +
Preference number: 4 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSCSCWK*VEIAGF
Trigger: AAAGCCTGCAATCTCGACTCATTTCCAGCATGAACA...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCATCAGAGGCCTCCCTCTaGTTGTACGGTCACACACAC +
Preference number: 4 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSSEASL*LYGHTH
Trigger: GTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCTGA...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGGCCTTCAGCTAAGTTaGTTAACCTCTCTGAGCCTC +
Preference number: 4 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSGLQLS*LTSLSL
Trigger: GAGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCC...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCGATTCGATAAATACGTaGTCTCTAATAAAACAGGAG +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSDSINT*SLIKQE
Trigger: CTCCTGTTTTATTAGAGACCACGTATTTATCGAATC...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCAACAGGAGAGATGGTaGAGACAATATATACATATA +
Preference number: 4 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSQQERW*RQYIHI
Trigger: TATATGTATATATTGTCTCCACCATCTCTCCTGTTG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATACACGGCCTAGGACCATaGACAGCAGCCATTGGGGCC +
Preference number: 4 (lower is better)
Translates to: MGSPEKLPTQATPITKRIHGLGP*TAAIGA
Trigger: GGCCCCAATGGCTGCTGTCCATGGTCCTAGGCCGTG...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGAAAATTAGCCGAGCGTaGTGGTGGGTGCCTGTAATC +
Preference number: 4 (lower is better)
Translates to: NQQRQNPERNVPKLIASLKISRA*WWVPVI
Trigger: GATTACAGGCACCCACCACCACGCTCGGCTAATTTT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAAGGTGGAGGTTGCAGTaGGCTGAGCTCGCACCACTG +
Preference number: 4 (lower is better)
Translates to: MGSPEKLPTQATPITKRIRWRLQ*AELAPL
Trigger: CAGTGGTGCGAGCTCAGCTCACTGCAACCTCCACCT...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGATGAGGTCAGCTTTCTaGCTCATAACCAGCAAGCCT +
Preference number: 4 (lower is better)
Translates to: NQQRQNPERNVPKLIASLMRSAF*LITSKP
Trigger: AGGCTTGCTGGTTATGAGGCAGAAAGCTGACCTCAT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATCGCGGCGCCGCCACATaGTGCGCTGGTGCAGCTCGT +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYRGAAT*CAGAAR
Trigger: ACGAGCTGCACCAGCGCACCATGTGGCGGCGCCGCG...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAAATCCCCTTGGGGAGTaGAGGAGGCTGTGGGCTGAA +
Preference number: 4 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPNPLGE*RRLWAE
Trigger: TTCAGCCCACAGCCTCCTCCACTCCCCAAGGGGATT...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACAAGTTCGTAGCTTTGTaGGAATATTACCCACTGCTC +
Preference number: 4 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYKFVAL*EYYPLL
Trigger: GAGCAGTGGGTAATATTCCCACAAAGCTACGAACTT...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAGCAGCCAGAGAAAAGTaGGGGAGCGGTGGAGGAGAG +
Preference number: 4 (lower is better)
Translates to: MGSPEKLPTQATPITKRIAAREK*GSGGGE
Trigger: CTCTCCTCCACCGCTCCCCCACTTTTCTCTGGCTGC...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTGCAAAATCTGTGTTCTaGTCAATGCAACTTGTAATA +
Preference number: 4 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVAKSVF*SMQLVI
Trigger: TATTACAAGTTGCATTGACCAGAACACAGATTTTGC...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGAGAAGAGTGTCTAGCTaGTCCCCCAAACCCTTAACC +
Preference number: 4 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTRRVSS*SPKPLT
Trigger: GGTTAAGGGTTTGGGGGACCAGCTAGACACTCTTCT...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCAATAGGTACCGGGTGGTaGCCTGCAAATCCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: FAFSKFVALWEYYPLLSAIGTGW*PANPAL
Trigger: CAAGGCTGGATTTGCAGGTCACCACCCGGTACCTAT...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGGTGCACTCCAATGAATaGTGTGCAAGGAAAGGTCAG +
Preference number: 4 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTVHSNE*CARKGQ
Trigger: CTGACCTTTCCTTGCACATCATTCATTGGAGTGCAC...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCACTGCAAATCCAGCCTTaGAGAATGACCGTCCGAATC +
Preference number: 4 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSLQIQP*RMTVRI
Trigger: GATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAG...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCATCCTGTGTCTACAGGTaGTCAGCATGCCCCCACTAC +
Preference number: 4 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPSCVYR*SACPHY
Trigger: GTAGTGGGGGCATGCTGACCACCTGTAGACACAGGA...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCAGCCAACCCCAGCGTTTaGAGTTTGTATCCTCCAGGG +
Preference number: 4 (lower is better)
Translates to: FAFSKFVALWEYYPLLSAANPSV*SLYPPG
Trigger: CCCTGGAGGATACAAACTCCAAACGCTGGGGTTGGC...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTAAATCAATGACTCCTTaGCAGCCAGAGAAAAGTGGG +
Preference number: 4 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSKSMTP*QPEKSG
Trigger: CCCACTTTTCTCTGGCTGCCAAGGAGTCATTGATTT...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACGCAAAGTGGCTTCATTaGAATCAAAATCACCCAAAA +
Preference number: 4 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYAKWLH*NQNHPK
Trigger: TTTTGGGTGATTTTGATTTCAATGAAGCCACTTTGC...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTCAGAGGAAGAATACCTaGTTATGTTGGATTTTTCGA +
Preference number: 4 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSQRKNT*LCWIFR
Trigger: TCGAAAAATCCAACATAAGCAGGTATTCTTCCTCTG...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATGCTTCCGAGCAGGACTaGCCCTCCACCATCCACAAG +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENASEQD*PSTIHK
Trigger: CTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGC...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AAAAGCACAAGAAAGGCCGGAGCGGCTGGTATTCTGAGGTCAGATGTAGGCTGTGATGAGGAAAACCTTTaGGTGTTGACATGGGAAGAT +
Preference number: 4 (lower is better)
Translates to: KSTRKAGAAGILRSDVGCDEENL*VLTWED
Trigger: ATCTTCCCATGTCAACACGCAAAGGTTTTCCTCATC...ACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR CCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATATCTGGGCTCCCCCTCTaGAAAACGGGAACCAGCTTT +
Preference number: 4 (lower is better)
Translates to: MGSPEKLPTQATPITKRISGLPL*KTGTSF
Trigger: AAAGCTGGTTCCCGTTTTCCAGAGGGGGAGCCCAGA...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGAGCGTCTCCAAGGTATaGAATTCCTCTTACAAAAGA +
Preference number: 4 (lower is better)
Translates to: NQQRQNPERNVPKLIASLSVSKV*NSSYKR
Trigger: TCTTTTGTAAGAGGAATTTCATACCTTGGAGACGCT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCACTAGACCCCAAGGTTTaGTCCAAACCACCTCTGGAT +
Preference number: 4 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPLDPKV*SKPPLD
Trigger: ATCCAGAGGTGGTTTGGAGCAAACCTTGGGGTCTAG...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCACACACACACACACACTaGTGTCTGCTGAAACCCGAT +
Preference number: 4 (lower is better)
Translates to: FAFSKFVALWEYYPLLSAHTHTH*CLLKPD
Trigger: ATCGGGTTTCAGCAGACAGCAGTGTGTGTGTGTGTG...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
3UTR CAA 72 bp GAAATCCAGCTCCCAGCTTGCAGCAGCACTGAGAGGTaGTACATTCTAAAGGACCTGGTCATTTACAGCAAA +
Preference number: 4 (lower is better)
Translates to: EIQLPACSSTER*YILKDLVIYSK
Trigger: TTTGCTGTAAATGACCAGGTCCTTTAGAATGTACAACCTCTCAGTGCTGCTGCAAGCTGGGAGCTGGATTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTCAGCAAAATTTTAAGTaGAGCACCAGAGACACAAAA +
Preference number: 4 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSQQNFK*STRDTK
Trigger: TTTTGTGTCTCTGGTGCTTCACTTAAAATTTTGCTG...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGCTGTGGCTAAGAAAGTaGTTAAATAGAAGCAGTGAC +
Preference number: 4 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTLWLRK*LNRSSD
Trigger: GTCACTGCTTCTATTTAATCACTTTCTTAGCCACAG...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGCTCTTCATCTCATTATaGAGCAAGCTACCTAAACGA +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWLFISL*SKLPKR
Trigger: TCGTTTAGGTAGCTTGCTGCATAATGAGATGAAGAG...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATAGCCATTGGGGCCAATaGGCTCCCCAGAGAAACTTC +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENSHWGQ*APQRNF
Trigger: GAAGTTTCTCTGGGGAGCCCATTGGCCCCAATGGCT...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGAAGTCTCTTCTGAGATaGAATTCTACAACTGGCACA +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWKSLLR*NSTTGT
Trigger: TGTGCCAGTTGTAGAATTCCATCTCAGAAGAGACTT...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATTCGCCACCTCGGCTTTaGAAATGGCAGTGTGTGGTA +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENSPPRL*KWQCVV
Trigger: TACCACACACTGCCATTTTCAAAGCCGAGGTGGCGA...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATTCCCTGAAGAGTCTTTaGAGCCAAGTCTCCGTCCAG +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENSLKSL*SQVSVQ
Trigger: CTGGACGGAGACTTGGCTGCAAAGACTCTTCAGGGA...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATATGACCGTCCGAATCTaGAGCCTGACACCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYMTVRI*SLTPRH
Trigger: GTGGCGAGGTGTCAGGCTGCAGATTCGGACGGTCAT...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AGCCTGTCCTTGAGTGTCCCCAAAGGTGACACTTTTTCCAGTAGACCTAAGTCAGAAATGAGTCGAGATTaGAGGCTTTTTAACTGCCTT +
Preference number: 4 (lower is better)
Translates to: SLSLSVPKGDTFSSRPKSEMSRD*RLFNCL
Trigger: AAGGCAGTTAAAAAGCCTGCAATCTCGACTCATTTC...TGACTTAGGTCTACTGGAAAAAGTGTCACCTTTGGGGACACTCAAGGACAGGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAGCTTCCAGAAAGGACTaGATCTCATTCGGAGTGTTG +
Preference number: 4 (lower is better)
Translates to: MGSPEKLPTQATPITKRIASRKD*ISFGVL
Trigger: CAACACTCCGAATGAGATCCAGTCCTTTCTGGAAGC...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCAAATCAAAATAAGAAGTaGAGGCTGAGCTCGGTGGCT +
Preference number: 4 (lower is better)
Translates to: FAFSKFVALWEYYPLLSANQNKK*RLSSVA
Trigger: AGCCACCGAGCTCAGCCTCCACTTCTTATTTTGATT...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ACAGGAGAATATCTACAAGGGACTTGGCTGAGAAGCTCTATCAGGAGGTCGTGGACTTGTAATATCAGGTaGACACTCAAAAAGTCCACA +
Preference number: 4 (lower is better)
Translates to: TGEYLQGTWLRSSIRRSWTCNIR*TLKKST
Trigger: TGTGGACTTTTTGAGTGTCCACCTGATATTACAAGT...CCACGACCTCCTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATATTCTCCTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGATGGAATTCTACAACTaGCACATTGTAGATGCTCAA +
Preference number: 4 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTMEFYN*HIVDAQ
Trigger: TTGAGCATCTACAATGTGCCAGTTGTAGAATTCCAT...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AAAAGCACAAGAAAGGCCGGAGCGGCTGGTATTCTGAGGTCAGATGTAGGCTGTTCTTTGAGTATTGACTaGTTAAATCATACCCATCCT +
Preference number: 4 (lower is better)
Translates to: KSTRKAGAAGILRSDVGCSLSID*LNHTHP
Trigger: AGGATGGGTATGATTTAACCAGTCAATACTCAAAGA...ACAGCCTACATCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
3UTR CAA 72 bp AAGAGAATAGGAAACGGACCCCCAAATTTGAAGAGATaGTATTTGTTTGTGGGAGATCAGGTGGGGGTGAGA +
Preference number: 4 (lower is better)
Translates to: KRIGNGPPNLKR*YLFVGDQVGVR
Trigger: TCTCACCCCCACCTGATCTCCCACAAACAAATACAATCTCTTCAAATTTGGGGGTCCGTTTCCTATTCTCTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp AAATTAAATCAAAAGCACAAGAAAGGCCGGAGCGGCTGGTATTCTGAGGTCAGAATGTTCCCAAGGAAGTaGCCATATAAGGAAATCCTG +
Preference number: 4 (lower is better)
Translates to: KLNQKHKKGRSGWYSEVRMFPRK*PYKEIL
Trigger: CAGGATTTCCTTATATGGTCACTTCCTTGGGAACAT...TCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGATTTAATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR TCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATAATCACTGCTCCCTaGAGAGTCTTTGCAGCCAAG +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENIITAP*RVFAAK
Trigger: CTTGGCTGCAAAGACTCTTCAGGGAGCAGTGATTAT...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCACACCCCACTATCTCATaGAATCCAAGTAATACAACA +
Preference number: 4 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPHPTIS*NPSNTT
Trigger: TGTTGTATTACTTGGATTGCATGAGATAGTGGGGTG...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATGAACTAGCAGTGCTGTaGGACGACCTCATGAAGGGA +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYELAVL*DDLMKG
Trigger: TCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTC...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATCAACCAAGTCATGCATaGGGTCAGCTTTCTGCCTCA +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYQPSHA*GQLSAS
Trigger: TGAGGCAGAAAGCTGACCTCATGCATGACTTGGTTG...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATAAGCTACCTAAACGATaGTCTCAGAGGCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYKLPKR*SQRPPS
Trigger: AGAGGGAGGCCTCTGAGATCATCGTTTAGGTAGCTT...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCACAATCAGTGAGATGCTaGTGCATTTCATTTAAATGG +
Preference number: 4 (lower is better)
Translates to: FAFSKFVALWEYYPLLSAQSVRC*CISFKW
Trigger: CCATTTAAATGAAATGCACCAGCATCTCACTGATTG...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CCA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATAGCAGAGAACTGTGATTaGATACAGCTGTGTAGTAAT +
Preference number: 4 (lower is better)
Translates to: MGSPEKLPTQATPITKRIAENCD*IQLCSN
Trigger: ATTACTACACAGCTGTATCCAATCACAGTTCTCTGC...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR TCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATAAGTCAAGTCTCTTCTaGGATGGAATTCTACAACTG +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENKSSLF*DGILQL
Trigger: CAGTTGTAGAATTCCATCTCAGAAGAGACTTGACTT...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATTCTTCACAGACGCTCTaGAGTGAAGCTAATCAAAAT +
Preference number: 4 (lower is better)
Translates to: ARKGQDSINTWSLIKQENSSQTL*SEANQN
Trigger: ATTTTGATTAGCTTCACTGCAGAGCGTCTGTGAAGA...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATTGCAGGCTTTTTAACTaGCTTTACCAGATAGCAGGG +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYCRLFN*LYQIAG
Trigger: CCCTGCTATCTGGTAAAGGCAGTTAAAAAGCCTGCA...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR GCA 90 bp AAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATATCATACAGGCCCTATTTaGAAATTCCTTGCACCTTCC +
Preference number: 4 (lower is better)
Translates to: KERSGFDKYVVSNKTGEYHTGPI*KFLAPS
Trigger: GGAAGGTGCAAGGAATTTGCAAATAGGGCCTGTATG...ATATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS GCA 90 bp GTCCTCGGCCTCCCGGGAGGGGCACCCGACATCCCGCACGCCTGGTaGCGGAAGGGGAGAGCGTTTCCAATCTCCTGGACGACAGAACCA +
Preference number: 5 (lower is better)
Translates to: VLGLPGGAPDIPHAW*RKGRAFPISWTTEP
Trigger: TGGTTCTGTCGTCCAGGAGATTGGAAACGCTCTCCCCTTCCGGCACCAGGCGTGCGGGATGTCGGGTGCCCCTCCCGGGAGGCCGAGGAC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552092.1
CDS CCA 90 bp GGAGTCCTCGGCCTCCCGGGAGGGGCACCCGACATCCCGCACGCCTaGTGCCGGAAGGGGAGAGCGTTTCCAATCTCCTGGACGACAGAA +
Preference number: 5 (lower is better)
Translates to: GVLGLPGGAPDIPHA*CRKGRAFPISWTTE
Trigger: TTCTGTCGTCCAGGAGATTGGAAACGCTCTCCCCTTCCGGCACCAGGCGTGCGGGATGTCGGGTGCCCCTCCCGGGAGGCCGAGGACTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552092.1
CDS-3UTR CAA 90 bp CGCCCTGGAACTAGCAGTGCTGTGGGACGACCTCATGAAGGGACCCAGTGGAGCCATGGACAGCAGCCATaGGGGCCAATGGGCTCCCCA +
Preference number: 5 (lower is better)
Translates to: RPGTSSAVGRPHEGTQWSHGQQP*GPMGSP
Trigger: TGGGGAGCCCATTGGCCCCAATGGCTGCTGTCCATG...GCTCCACTGGGTCCCTTCATGAGGTCGTCCCACAGCACTGCTAGTTCCAGGGCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS CCA 90 bp ATCCCGCACGCCTGGTGCCGGAAGGGGAGAGCGTTTCCAATCTCCTaGACGACAGAACCAGAGAAAGCCGTGTCCCAGCCCTCTCTCCAC +
Preference number: 5 (lower is better)
Translates to: IPHAWCRKGRAFPIS*TTEPEKAVSQPSLH
Trigger: GTGGAGAGAGGGCTGGGACACGGCTTTCTCTGGTTCTGTCGTCCAGGAGATTGGAAACGCTCTCCCCTTCCGGCACCAGGCGTGCGGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552092.1
CDS-3UTR CAA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTACGTCCCCAAGCTTATaGCCTCTCTGGCTAGGCCAG +
Preference number: 5 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVTSPSL*PLWLGQ
Trigger: CTGGCCTAGCCAGAGAGGCAATAAGCTTGGGGACGT...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GGACTGGATCTCATTCGGAGTGTTGAAGTCCCGGGGGCTCCAGTCCCAGCGGTTCCCAGCGTTTGGAGTTaGTATCCTCCAGGGGAAACA +
Preference number: 5 (lower is better)
Translates to: GLDLIRSVEVPGAPVPAVPSVWS*YPPGET
Trigger: TGTTTCCCCTGGAGGATACAAACTCCAAACGCTGGG...AACCGCTGGGACTGGAGCCCCCGGGACTTCAACACTCCGAATGAGATCCAGTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GTGGGAATATTACCCACTGCTCTCTGCAGTCCCCAGCTAAGCGAGGGTCCCCTGACGCACACGGGCTCCTaGGCGCTTATAGTGCAAAGA +
Preference number: 5 (lower is better)
Translates to: VGILPTALCSPQLSEGPLTHTGS*ALIVQR
Trigger: TCTTTGCACTATAAGCGCCAAGGAGCCCGTGTGCGT...CAGGGGACCCTCGCTTAGCTGGGGACTGCAGAGAGCAGTGGGTAATATTCCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACGGAGAGGGAGGGATGTaGCCAGCACTTTGCACACTG +
Preference number: 5 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYGEGGM*PALCTL
Trigger: CAGTGTGCAAAGTGCTGGCAACATCCCTCCCTCTCC...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTGAGGCCTCCCTCTGCTaGTACGGTCACACACACACA +
Preference number: 5 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSEASLC*YGHTHT
Trigger: TGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTC...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACATCTCATTCGGAGTGTaGAAGTCCCGGGGGCTCCAG +
Preference number: 5 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHISFGV*KSRGLQ
Trigger: CTGGAGCCCCCGGGACTTCAACACTCCGAATGAGAT...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp ATGGGCTCCCCAGAGAAACTTCCTACTCAAGCTACACCAATAACAAAGAGAATATCGTCGCCTAGCGCCTaGAGCCGGGCGGCGGTGAGC +
Preference number: 5 (lower is better)
Translates to: MGSPEKLPTQATPITKRISSPSA*SRAAVS
Trigger: GCTCACCGCCGCCCGGCTCAAGGCGCTAGGCGACGA...TATTCTCTTTGTTATTGGTGTAGCTTGAGTAGGAAGTTTCTCTGGGGAGCCCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp CATCATCTGCTTCCGAGCAGGACTGCCCCTCCACCATCCACAAGTCAAGTCTCTCCTAGACCCCAAGGTTaGCTCCAAACCACCTCTGGA +
Preference number: 5 (lower is better)
Translates to: HHLLPSRTAPPPSTSQVSPRPQG*LQTTSG
Trigger: TCCAGAGGTGGTTTGGAGCAAACCTTGGGGTCTAGG...AGAGACTTGACTTGTGGATGGTGGAGGGGCAGTCCTGCTCGGAAGCAGATGATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GGCTTCCCCAGTCCCATTCTGTGTTTCTACGATCGCTCCAGGCGCTGTCTTTACTGCCAACCCCAGCGTTaGGAGTTTGTATCCTCCAGG +
Preference number: 5 (lower is better)
Translates to: GFPSPILCFYDRSRRCLYCQPQR*EFVSSR
Trigger: CCTGGAGGATACAAACTCCAAACGCTGGGGTTGGCA...GTAAAGACAGCGCCTGGAGCGATCGTAGAAACACAGAATGGGACTGGGGAAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGCCAACCAGCCTGTCCTaGAGTGTCCCCAAAGGTGAC +
Preference number: 5 (lower is better)
Translates to: NQQRQNPERNVPKLIASLPTSLS*SVPKGD
Trigger: GTCACCTTTGGGGACACTCAAGGACAGGCTGGTTGG...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGCCTGCAAATCCAGCCTaGGAGAATGACCGTCCGAAT +
Preference number: 5 (lower is better)
Translates to: NQQRQNPERNVPKLIASLPANPA*ENDRPN
Trigger: ATTCGGACGGTCATTCTCCAAGGCTGGATTTGCAGG...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTCTATTTGCAAATTCCTaGCACCTTCCCCGGGGCCTT +
Preference number: 5 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSLFANS*HLPRGL
Trigger: AAGGCCCCGGGGAAGGTGCAAGGAATTTGCAAATAG...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AGAGGCCTCCCTCTGCTTGTACGGTCACACACACACACACACACACACACACACTTCAGGAGAAGAAACTaGGGAGTTCAGGTTGGAGAA +
Preference number: 5 (lower is better)
Translates to: RGLPLLVRSHTHTHTHTHFRRRN*GVQVGE
Trigger: TTCTCCAACCTGAACTCCCAAGTTTCTTCTCCTGAA...GTGTGTGTGTGTGTGTGTGTGTGTGTGTGACCGTACAAGCAGAGGGAGGCCTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS CCA 90 bp AACCAAGGCTCAGAAGGTAATGGGATCGGCCTAAGGTCACACAACTaGCAAATGCGAGATGGAGAAAGTGATGTGAAAGTCGGCCTGACT +
Preference number: 5 (lower is better)
Translates to: NQGSEGNGIGLRSHN*QMRDGESDVKVGLT
Trigger: AGTCAGGCCGACTTTCACATCACTTTCTCCATCTCGCATTTGCCAGTTGTGTGACCTTAGGCCGATCCCATTACCTTCTGAGCCTTGGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000586941.1
CDS-3UTR CAA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGAGCAGCACTGAGAGGTaGTACATTCTAAAGGACCTG +
Preference number: 5 (lower is better)
Translates to: NQQRQNPERNVPKLIASLSSTER*YILKDL
Trigger: CAGGTCCTTTAGAATGTACAACCTCTCAGTGCTGCT...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGTGGCCTTCAGCTAAGTaGCTTAACCTCTCTGAGCCT +
Preference number: 5 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTWPSAK*LNLSEP
Trigger: AGGCTCAGAGAGGTTAAGCAACTTAGCTGAAGGCCA...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AGCGGCTGGTATTCTGAGGTCAGATGTAGGCTGTTGCTCGCTCCGGCTGGGTCTCTCTCTCCTGTATCTTaGAGTATTGACTGGTTAAAT +
Preference number: 5 (lower is better)
Translates to: SGWYSEVRCRLLLAPAGSLSPVS*SIDWLN
Trigger: ATTTAACCAGTCAATACTCAAAGATACAGGAGAGAG...AGACCCAGCCGGAGCGAGCAACAGCCTACATCTGACCTCAGAATACCAGCCGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS TCA 90 bp GATCGGCCTAAGGTCACACAACTGGCAAATGCGAGATGGAGAAAGTaGTGTGAAAGTCGGCCTGACTCCAAAATTCATGTCCCTTTCCAT +
Preference number: 5 (lower is better)
Translates to: DRPKVTQLANARWRK*CESRPDSKIHVPFH
Trigger: ATGGAAAGGGACATGAATTTTGGAGTCAGGCCGACTTTCACATCACTTTCTCCATCTCGCATTTGCCAGTTGTGTGACCTTAGGCCGATC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586941.1
CDS-3UTR CAA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCATCAGCAGCCCTGGGGTaGCATTTCTCTTTAAAGGGC +
Preference number: 5 (lower is better)
Translates to: FAFSKFVALWEYYPLLSASAALG*HFSLKG
Trigger: GCCCTTTAAAGAGAAATGCAACCCCAGGGCTGCTGA...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTGTCTAAGTTCGTAGCTTaGTGGGAATATTACCCACTG +
Preference number: 5 (lower is better)
Translates to: NQQRQNPERNVPKLIASLSKFVA*WEYYPL
Trigger: CAGTGGGTAATATTCCCACAAAGCTACGAACTTAGA...CAGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTAATTCCCACCAGTCTTaGCAAATAGTTTCTAAGTAC +
Preference number: 5 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSNSHQS*QIVSKY
Trigger: GTACTTAGAAACTATTTGCAAAGACTGGTGGGAATT...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp GAACCAACAACGTCAGAACCCAGAACGGAACGTCCCCAAGCTTATTGCCTCTCTTTTCTATCATGCCTTTaGCACTGTTACCTCTTATTC +
Preference number: 5 (lower is better)
Translates to: EPTTSEPRTERPQAYCLSFLSCL*HCYLLF
Trigger: GAATAAGAGGTAACAGTGCAAAAGGCATGATAGAAA...AGAGAGGCAATAAGCTTGGGGACGTTCCGTTCTGGGTTCTGACGTTGTTGGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp TTTGCCTTCTCTAAGTTCGTAGCTTTGTGGGAATATTACCCACTGCTCTCTGCAAGAGATTGTATTTGTTaGTGGGAGATCAGGTGGGGG +
Preference number: 5 (lower is better)
Translates to: FAFSKFVALWEYYPLLSARDCIC*WEIRWG
Trigger: CCCCCACCTGATCTCCCACAAACAAATACAATCTCT...TGCAGAGAGCAGTGGGTAATATTCCCACAAAGCTACGAACTTAGAGAAGGCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGTTGAAGAGATTGTATTaGTTTGTGGGAGATCAGGTG +
Preference number: 5 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTLKRLY*FVGDQV
Trigger: CACCTGATCTCCCACAAACAAATACAATCTCTTCAA...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AATTCCTCTTACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAATATCTACAAGGGACTaGGCTGAGAAGCTCTATCAG +
Preference number: 5 (lower is better)
Translates to: NSSYKRAQRRQNQQRQNPISTRD*AEKLYQ
Trigger: CTGATAGAGCTTCTCAGCCAAGTCCCTTGTAGATAT...TGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGTAAGAGGAATT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp ACAAAAGAGCACAACGACGTCAGAACCAACAACGTCAGAACCCAGAACGGAACGAACGGACCCCCAAATTaGAAGAGATTGTATTTGTTT +
Preference number: 5 (lower is better)
Translates to: TKEHNDVRTNNVRTQNGTNGPPN*KRLYLF
Trigger: AAACAAATACAATCTCTTCAAATTTGGGGGTCCGTT...CGTTCCGTTCTGGGTTCTGACGTTGTTGGTTCTGACGTCGTTGTGCTCTTTTGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS-3UTR CAA 90 bp AAATTAAATCAAAAGCACAAGAAAGGCCGGAGCGGCTGGTATTCTGAGGTCAGAACCATAAAGCGTCTTTaGTTCCCTCTCTCCTGTATC +
Preference number: 5 (lower is better)
Translates to: KLNQKHKKGRSGWYSEVRTIKRL*FPLSCI
Trigger: GATACAGGAGAGAGGGAACAAAAGACGCTTTATGGT...TCTGACCTCAGAATACCAGCCGCTCCGGCCTTTCTTGTGCTTTTGATTTAATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000550505.5
CDS-3UTR CAA 90 bp GCAAGGAAAGGTCAGGATTCGATAAATACGTGGTCTCTAATAAAACAGGAGAATGATGTTGCCAGCACTTaGCACACTGTGGAAATATTT +
Preference number: 5 (lower is better)
Translates to: ARKGQDSINTWSLIKQENDVAST*HTVEIF
Trigger: AAATATTTCCACAGTGTGCAAAGTGCTGGCAACATC...ATTCTCCTGTTTTATTAGAGACCACGTATTTATCGAATCCTGACCTTTCCTTGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS CAA 72 bp CACATGGTGCGCTGGTGCAGCTCGTCGCCTAGCGCCTaGAGCCGGGCGGCGGTGAGCTGCGCGGCGGACGAG +
Preference number: 6 (lower is better)
Translates to: HMVRWCSSSPSA*SRAAVSCAADE
Trigger: CTCGTCCGCCGCGCAGCTCACCGCCGCCCGGCTCAAGGCGCTAGGCGACGAGCTGCACCAGCGCACCATGTG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENST00000257572.5
CDS CCA 72 bp GGCCTCCCGGGAGGGGCACCCGACATCCCGCACGCCTaGTGCCGGAAGGGGAGAGCGTTTCCAATCTCCTGG +
Preference number: 6 (lower is better)
Translates to: GLPGGAPDIPHA*CRKGRAFPISW
Trigger: CCAGGAGATTGGAAACGCTCTCCCCTTCCGGCACCAGGCGTGCGGGATGTCGGGTGCCCCTCCCGGGAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENST00000552092.1
CDS CCA 72 bp GCCTGGTGCCGGAAGGGGAGAGCGTTTCCAATCTCCTaGACGACAGAACCAGAGAAAGCCGTGTCCCAGCCC +
Preference number: 6 (lower is better)
Translates to: AWCRKGRAFPIS*TTEPEKAVSQP
Trigger: GGGCTGGGACACGGCTTTCTCTGGTTCTGTCGTCCAGGAGATTGGAAACGCTCTCCCCTTCCGGCACCAGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000552092.1
CDS TCA 72 bp AAGGTCACACAACTGGCAAATGCGAGATGGAGAAAGTaGTGTGAAAGTCGGCCTGACTCCAAAATTCATGTC +
Preference number: 6 (lower is better)
Translates to: KVTQLANARWRK*CESRPDSKIHV
Trigger: GACATGAATTTTGGAGTCAGGCCGACTTTCACATCACTTTCTCCATCTCGCATTTGCCAGTTGTGTGACCTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENST00000586941.1