Pregenerated sensors for HRG (Homo sapiens)
Ensembl gene IDs: ENSG00000113905Ensembl transcript IDs: ENST00000232003.5, ENST00000468154.1, ENST00000495413.1
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GAGCCTTGGGCCGGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTaGGTTGAAGAGTCTGATTTTCAGTGGAGTCCTACACAGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: EPWAGVPGALGVAAR*VEESDFQWSPTQMG Trigger: TCCCATCTGTGTAGGACTCCACTGAAAATCAGACTCTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS CCA 90 bp | AGTCAGTCAGAGAGCCTTGGGCCGGAGTTCCAGGGGCTCTGGGAGTaGCTGCCAGGTGAGTTGAAGAGTCTGATTTTCAGTGGAGTCCTA | + |
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Preference number: 5 (lower is better) Translates to: SQSESLGPEFQGLWE*LPGELKSLIFSGVL Trigger: TAGGACTCCACTGAAAATCAGACTCTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTCTGACTGACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS CCA 90 bp | GGTCTAGAGCTTTCTCAGCCTCCGGCTCAACAGCACTGCAGTCAGTaGGACTCACGGCACACGAATACTGTAATCGCCGCTACTTGGGAG | + |
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Preference number: 5 (lower is better) Translates to: GLELSQPPAQQHCSQ*DSRHTNTVIAATWE Trigger: CTCCCAAGTAGCGGCGATTACAGTATTCGTGTGCCGTGAGTCCCACTGACTGCAGTGCTGTTGAGCCGGAGGCTGAGAAAGCTCTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS TCA 90 bp | CAATCCGCAGCAATTGGAAAAGGTAGCCATCCCGTCGCCTTTTATTaGTCAGGTCTAGAGCTTTCTCAGCCTCCGGCTCAACAGCACTGC | + |
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Preference number: 5 (lower is better) Translates to: QSAAIGKGSHPVAFY*SGLELSQPPAQQHC Trigger: GCAGTGCTGTTGAGCCGGAGGCTGAGAAAGCTCTAGACCTGATCAATAAAAGGCGACGGGATGGCTACCTTTTCCAATTGCTGCGGATTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS GCA 90 bp | GGCTCAACAGCACTGCAGTCAGTGGGACTCACGGCACACGAATACTaGAATGTGATCAAAAGCAGTGCTGCAATGAGTGCCTTCATTTTG | + |
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Preference number: 5 (lower is better) Translates to: GSTALQSVGLTAHEY*NVIKSSAAMSAFIL Trigger: CAAAATGAAGGCACTCATTGCAGCACTGCTTTTGATCACATTGCAGTATTCGTGTGCCGTGAGTCCCACTGACTGCAGTGCTGTTGAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS CCA 90 bp | TGGTTCAGTGTGGACATTAGAAGAGCTAACAAAGGTACTAATGGATaGTTTCTCCCTTTTGACCAGGGAGAATGTGTTGTTAAACCTCAG | + |
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Preference number: 5 (lower is better) Translates to: WFSVDIRRANKGTNG*FLPFDQGECVVKPQ Trigger: CTGAGGTTTAACAACACATTCTCCCTGGTCAAAAGGGAGAAACCATCCATTAGTACCTTTGTTAGCTCTTCTAATGTCCACACTGAACCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000495413.1 |
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| CDS CCA 72 bp | CAGTCAGAGAGCCTTGGGCCGGAGTTCCAGGGGCTCTaGGAGTGGCTGCCAGGTGAGTTGAAGAGTCTGATT | + |
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Preference number: 6 (lower is better) Translates to: QSESLGPEFQGL*EWLPGELKSLI Trigger: AATCAGACTCTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTCTGACTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS CCA 72 bp | CTGAGAAAATGTGAGAAGGAGTCAGTCAGAGAGCCTTaGGCCGGAGTTCCAGGGGCTCTGGGAGTGGCTGCC | + |
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Preference number: 6 (lower is better) Translates to: LRKCEKESVREP*AGVPGALGVAA Trigger: GGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTCTGACTGACTCCTTCTCACATTTTCTCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS CCA 72 bp | GAGAGCCTTGGGCCGGAGTTCCAGGGGCTCTGGGAGTaGCTGCCAGGTGAGTTGAAGAGTCTGATTTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: ESLGPEFQGLWE*LPGELKSLIFS Trigger: ACTGAAAATCAGACTCTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAGGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS CAA 90 bp | CTTGGGCCGGAGTTCCAGGGGCTCTGGGAGTGGCTGCCAGGTGAGTaGAAGAGTCTGATTTTCAGTGGAGTCCTACACAGATGGGATACG | + |
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Preference number: 6 (lower is better) Translates to: LGPEFQGLWEWLPGE*KSLIFSGVLHRWDT Trigger: CGTATCCCATCTGTGTAGGACTCCACTGAAAATCAGACTCTTCAACTCACCTGGCAGCCACTCCCAGAGCCCCTGGAACTCCGGCCCAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS GCA 72 bp | GGTCTAGAGCTTTCTCAGCCTCCGGCTCAACAGCACTaGAGTCAGTGGGACTCACGGCACACGAATACTGCA | + |
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Preference number: 6 (lower is better) Translates to: GLELSQPPAQQH*SQWDSRHTNTA Trigger: TGCAGTATTCGTGTGCCGTGAGTCCCACTGACTGCAGTGCTGTTGAGCCGGAGGCTGAGAAAGCTCTAGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS CCA 72 bp | CTTTCTCAGCCTCCGGCTCAACAGCACTGCAGTCAGTaGGACTCACGGCACACGAATACTGTAATCGCCGCT | + |
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Preference number: 6 (lower is better) Translates to: LSQPPAQQHCSQ*DSRHTNTVIAA Trigger: AGCGGCGATTACAGTATTCGTGTGCCGTGAGTCCCACTGACTGCAGTGCTGTTGAGCCGGAGGCTGAGAAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS GCA 72 bp | GGTCTAGAGCTTTCTCAGCCTCCGGCTCAACAGCACTaGAGTCAGTGGGACTCACGGCACACGAATACTGTA | + |
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Preference number: 6 (lower is better) Translates to: GLELSQPPAQQH*SQWDSRHTNTV Trigger: TACAGTATTCGTGTGCCGTGAGTCCCACTGACTGCAGTGCTGTTGAGCCGGAGGCTGAGAAAGCTCTAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS CCA 72 bp | GCCGTGGCCATGGCAACAGTGACCTTGGTTATGGGGTaGTGGGTCACAAGGTCCATAGTCTTGGAAATCATG | + |
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Preference number: 6 (lower is better) Translates to: AVAMATVTLVMG*WVTRSIVLEIM Trigger: CATGATTTCCAAGACTATGGACCTTGTGACCCACCACCCCATAACCAAGGTCACTGTTGCCATGGCCACGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS CAA 72 bp | GGGCCCCATTTGTGCCAAAAGTGGCATGTTGACAACTaGAGCAGGACATGGGCAATAGTGGAGGAGGGCCTT | + |
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Preference number: 6 (lower is better) Translates to: GPHLCQKWHVDN*SRTWAIVEEGL Trigger: AAGGCCCTCCTCCACTATTGCCCATGTCCTGCTCAAGTTGTCAACATGCCACTTTTGGCACAAATGGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS TCA 72 bp | AGGCGATCGGGCAGCGTCAGTCTTCAGCTGCTAAGCTaGGAAAATGTGAGAAGGAGTCAGTCAGAGAGCCTT | + |
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Preference number: 6 (lower is better) Translates to: RRSGSVSLQLLS*ENVRRSQSESL Trigger: AAGGCTCTCTGACTGACTCCTTCTCACATTTTCTCAGCTTAGCAGCTGAAGACTGACGCTGCCCGATCGCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000468154.1 |
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| CDS GCA 72 bp | GCACTGCAGTCAGTGGGACTCACGGCACACGAATACTaGAATGTGATCAAAAGCAGTGCTGCAATGAGTGCC | + |
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Preference number: 6 (lower is better) Translates to: ALQSVGLTAHEY*NVIKSSAAMSA Trigger: GGCACTCATTGCAGCACTGCTTTTGATCACATTGCAGTATTCGTGTGCCGTGAGTCCCACTGACTGCAGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS CCA 72 bp | GGGATGATGATGATCTCTAGATCCATGGGGCTTGAATaGAGGCTTGGTGGTAGAAGAACGCTCATGCCCACC | + |
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Preference number: 6 (lower is better) Translates to: GMMMISRSMGLE*RLGGRRTLMPT Trigger: GGTGGGCATGAGCGTTCTTCTACCACCAAGCCTCCATTCAAGCCCCATGGATCTAGAGATCATCATCATCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS CCA 72 bp | GTGGCCATGGCAACAGTGACCTTGGTTATGGGGTGGTaGGTCACAAGGTCCATAGTCTTGGAAATCATGGCA | + |
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Preference number: 6 (lower is better) Translates to: VAMATVTLVMGW*VTRSIVLEIMA Trigger: TGCCATGATTTCCAAGACTATGGACCTTGTGACCCACCACCCCATAACCAAGGTCACTGTTGCCATGGCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS CAA 90 bp | AATGTCTTTGGGCCCCATTTGTGCCAAAAGTGGCATGTTGACAACTaGAGCAGGACATGGGCAATAGTGGAGGAGGGCCTTGTGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: NVFGPHLCQKWHVDN*SRTWAIVEEGLVEV Trigger: CACTTCCACAAGGCCCTCCTCCACTATTGCCCATGTCCTGCTCAAGTTGTCAACATGCCACTTTTGGCACAAATGGGGCCCAAAGACATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS TCA 72 bp | GCAATTGGAAAAGGTAGCCATCCCGTCGCCTTTTATTaGTCAGGTCTAGAGCTTTCTCAGCCTCCGGCTCAA | + |
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Preference number: 6 (lower is better) Translates to: AIGKGSHPVAFY*SGLELSQPPAQ Trigger: TTGAGCCGGAGGCTGAGAAAGCTCTAGACCTGATCAATAAAAGGCGACGGGATGGCTACCTTTTCCAATTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS TCA 72 bp | AGTGGAAGGGATGTCCCAAATGAGGCGGTACACCATTaGTGTTCTCATGTTCCTGAGGGTCGAAGACTTCAC | + |
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Preference number: 6 (lower is better) Translates to: SGRDVPNEAVHH*CSHVPEGRRLH Trigger: GTGAAGTCTTCGACCCTCAGGAACATGAGAACATCAATGGTGTACCGCCTCATTTGGGACATCCCTTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS TCA 72 bp | TGTCTTTGGGCCCCATTTGTGCCAAAAGTGGCATGTTaGCAACTTGAGCAGGACATGGGCAATAGTGGAGGA | + |
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Preference number: 6 (lower is better) Translates to: CLWAPFVPKVAC*QLEQDMGNSGG Trigger: TCCTCCACTATTGCCCATGTCCTGCTCAAGTTGTCAACATGCCACTTTTGGCACAAATGGGGCCCAAAGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS CAA 72 bp | CACTCTGTCCAAGTGGGCATCAGCAATCCGCAGCAATaGGAAAAGGTAGCCATCCCGTCGCCTTTTATTGAT | + |
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Preference number: 6 (lower is better) Translates to: HSVQVGISNPQQ*EKVAIPSPFID Trigger: ATCAATAAAAGGCGACGGGATGGCTACCTTTTCCAATTGCTGCGGATTGCTGATGCCCACTTGGACAGAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS CCA 72 bp | GTGGGCGCTAAGAAGGTTTCTAGACCTGGTTCAGTGTaGACATTAGAAGAGCTAACAAAGGTACTAATGGAT | + |
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Preference number: 6 (lower is better) Translates to: VGAKKVSRPGSV*TLEELTKVLMD Trigger: ATCCATTAGTACCTTTGTTAGCTCTTCTAATGTCCACACTGAACCAGGTCTAGAAACCTTCTTAGCGCCCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495413.1 |
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| CDS GCA 72 bp | GGCACACGAATACTGCAATGTGATCAAAAGCAGTGCTaGAATGAGTGCCTTCATTTTGTTAAACCATCCCTT | + |
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Preference number: 6 (lower is better) Translates to: GTRILQCDQKQC*NECLHFVKPSL Trigger: AAGGGATGGTTTAACAAAATGAAGGCACTCATTGCAGCACTGCTTTTGATCACATTGCAGTATTCGTGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000232003.5 |
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| CDS CCA 72 bp | GTTCATGGGAATGATGCTTATGGGGATGGAGGTCACTaGAATTATTATTATGAGAATGTCTTTGGGCCCCAT | + |
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Preference number: 6 (lower is better) Translates to: VHGNDAYGDGGH*NYYYENVFGPH Trigger: ATGGGGCCCAAAGACATTCTCATAATAATAATTCCAGTGACCTCCATCCCCATAAGCATCATTCCCATGAAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENST00000232003.5 ENST00000495413.1 |
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| CDS CAA 72 bp | ATGGATGGTTTCTCCCTTTTGACCAGGGAGAATGTGTaGTTAAACCTCAGAAAAATCCTGGACTTGGCATCA | + |
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Preference number: 6 (lower is better) Translates to: MDGFSLLTRENV*LNLRKILDLAS Trigger: TGATGCCAAGTCCAGGATTTTTCTGAGGTTTAACAACACATTCTCCCTGGTCAAAAGGGAGAAACCATCCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000495413.1 |
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| CDS CAA 72 bp | GAGCTAACAAAGGTACTAATGGATGGTTTCTCCCTTTaGACCAGGGAGAATGTGTTGTTAAACCTCAGAAAA | + |
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Preference number: 6 (lower is better) Translates to: ELTKVLMDGFSL*TRENVLLNLRK Trigger: TTTTCTGAGGTTTAACAACACATTCTCCCTGGTCAAAAGGGAGAAACCATCCATTAGTACCTTTGTTAGCTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000495413.1 |
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| CDS CAA 72 bp | CATTGTAAAATGGGGATAATACTATGTACTCACAGGTaGTGGGAGGGATTAATTAAACAAGAGGATGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: HCKMGIILCTHR*WEGLIKQEDAV Trigger: TACAGCATCCTCTTGTTTAATTAATCCCTCCCACAACCTGTGAGTACATAGTATTATCCCCATTTTACAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495413.1 |
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| CDS CCA 72 bp | TGTAAAATGGGGATAATACTATGTACTCACAGGTTGTaGGAGGGATTAATTAAACAAGAGGATGCTGTAAAA | + |
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Preference number: 6 (lower is better) Translates to: CKMGIILCTHRL*EGLIKQEDAVK Trigger: TTTTACAGCATCCTCTTGTTTAATTAATCCCTCCCACAACCTGTGAGTACATAGTATTATCCCCATTTTACA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000495413.1 |
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