Pregenerated sensors for HRCT1 (Homo sapiens)
Ensembl gene IDs: ENSG00000196196Ensembl transcript IDs: ENST00000354323.3
Found 76 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGACATTCTCAGGGCCTCTCCCAGTGCCCTGCCCGCCAGAGGCCTaGAGCAGCCTGATGAGGAGGTCAAGACGGGCACTTCACATCCAC | + |
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Preference number: 1 (lower is better) Translates to: RTFSGPLPVPCPPEA*SSLMRRSRRALHIH Trigger: GTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAGGCTGCTGCAGGCCTCTGGCGGGCAGGGCACTGGGAGAGGCCCTGAGAATGTCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 90 bp | CTTCTCCAAACCAAAAGGACATTCTCAGGGCCTCTCCCAGTGCCCTaGCCGCCAGAGGCCTGCAGCAGCCTGATGAGGAGGTCAAGACGG | + |
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Preference number: 1 (lower is better) Translates to: LLQTKRTFSGPLPVP*PPEACSSLMRRSRR Trigger: CCGTCTTGACCTCCTCATCAGGCTGCTGCAGGCCTCTGGCGGGCAGGGCACTGGGAGAGGCCCTGAGAATGTCCTTTTGGTTTGGAGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 90 bp | AGTCACTGTCACAAGACGGGCTGTCCAGCCCCGAAAGAGCACCCTTaGTCTCCACTCCCCAAACCCTTCAGCACTGCAGACCCAGTGTTC | + |
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Preference number: 1 (lower is better) Translates to: SHCHKTGCPAPKEHP*SPLPKPFSTADPVF Trigger: GAACACTGGGTCTGCAGTGCTGAAGGGTTTGGGGAGTGGAGAGCAAGGGTGCTCTTTCGGGGCTGGACAGCCCGTCTTGTGACAGTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 90 bp | GTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCTCACTaGGAGTCACTGTCACAAGACGGGCTGTCCAGCCCCGAAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: VCWLCQDTLVISGAH*ESLSQDGLSSPERA Trigger: TGCTCTTTCGGGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 90 bp | ACATCCACTTGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTaGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: TSTCVLALPRHACHF*GSLGVTVTRRAVQP Trigger: GGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 90 bp | GAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTaGCAAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: EEVKTGTSHPLVCWL*QDTLVISGAHWESL Trigger: CAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 90 bp | CAGCCTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTaGTGGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCTCACTGG | + |
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Preference number: 1 (lower is better) Translates to: QPDEEVKTGTSHPLV*WLCQDTLVISGAHW Trigger: CCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 90 bp | CCTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTaGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCTCACTGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PDEEVKTGTSHPLVC*LCQDTLVISGAHWE Trigger: CTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 90 bp | TCCCCAAACCCTTCAGCACTGCAGACCCAGTGTTCCTCCATTCTCTaGTGCCATAGTACACTGGGGCATGCCATGCAAATGCAGCTGGAG | + |
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Preference number: 1 (lower is better) Translates to: SPNPSALQTQCSSIL*CHSTLGHAMQMQLE Trigger: CTCCAGCTGCATTTGCATGGCATGCCCCAGTGTACTATGGCAGCAGAGAATGGAGGAACACTGGGTCTGCAGTGCTGAAGGGTTTGGGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 90 bp | CACTGCAGACCCAGTGTTCCTCCATTCTCTGCTGCCATAGTACACTaGGGCATGCCATGCAAATGCAGCTGGAGCAAGCCCCAGTCTATT | + |
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Preference number: 1 (lower is better) Translates to: HCRPSVPPFSAAIVH*GMPCKCSWSKPQSI Trigger: AATAGACTGGGGCTTGCTCCAGCTGCATTTGCATGGCATGCCCCAGTGTACTATGGCAGCAGAGAATGGAGGAACACTGGGTCTGCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CAA 90 bp | CGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACACGCTaGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGC | + |
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Preference number: 2 (lower is better) Translates to: RALHIHLCAGSAKTR*SFLGLTGSHCHKTG Trigger: GCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CCA 90 bp | GCATGCCATGCAAATGCAGCTGGAGCAAGCCCCAGTCTATTGTTCCCCTCGTTCGGGGTCCACTTGTCCTaGGAACAGATGGGAGGGCAG | + |
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Preference number: 2 (lower is better) Translates to: ACHANAAGASPSLLFPSFGVHLS*EQMGGQ Trigger: CTGCCCTCCCATCTGTTCCCAGGACAAGTGGACCCC...GAACGAGGGGAACAATAGACTGGGGCTTGCTCCAGCTGCATTTGCATGGCATGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CCA 90 bp | TTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGCCCCGAAAGGCTGCCATAGTACACTaGGGCATGCCATGCAAATGC | + |
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Preference number: 2 (lower is better) Translates to: FWGSLGVTVTRRAVQPRKAAIVH*GMPCKC Trigger: GCATTTGCATGGCATGCCCCAGTGTACTATGGCAGC...CTTTCGGGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CAA 90 bp | TGCAGCAGCCTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTaGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCTC | + |
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Preference number: 2 (lower is better) Translates to: CSSLMRRSRRALHIH*CAGSAKTRLSFLGL Trigger: GAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAGGCTGCTGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACCGTTCACCCCAGAGATaGATCCTTCCACATGGAAAC | + |
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Preference number: 2 (lower is better) Translates to: EEVKTGTSHPLVCWLCQDRSPQR*ILPHGN Trigger: GTTTCCATGTGGAAGGATGCATCTCTGGGGTGAACG...GTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR GCA 90 bp | GCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGTGTTCCTCCATTCTCTaGTGCCATAGTACACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: ACHFWGSLGVTVTRRAVQCSSIL*CHSTLG Trigger: CCCCAGTGTACTATGGCAGCAGAGAATGGAGGAACA...CTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CCA 90 bp | GGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACACTTCCACATGGAAACATaGGGTCCACTTGTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: GGQDGHFTSTCVLALPRHFHMET*GPLVLG Trigger: TCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAA...GTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CCA 90 bp | TGCCTTCTCCAAACCAAAAGGACATTCTCAGGGCCTCTCCCAGTGCCCTGCCCGATGCATCCTTCCACATaGAAACATGGGGTCCACTTG | + |
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Preference number: 2 (lower is better) Translates to: CLLQTKRTFSGPLPVPCPMHPST*KHGVHL Trigger: CAAGTGGACCCCATGTTTCCATGTGGAAGGATGCAT...CGGGCAGGGCACTGGGAGAGGCCCTGAGAATGTCCTTTTGGTTTGGAGAAGGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CCA 90 bp | ACACTGCCTTCTCCAAACCAAAAGGACATTCTCAGGGCCTCTCCCAGTGCCCTGCACGCTTGTCATTTCTaGGGCTCACTGGGAGTCACT | + |
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Preference number: 2 (lower is better) Translates to: TLPSPNQKDILRASPSALHACHF*GSLGVT Trigger: AGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTG...CAGGGCACTGGGAGAGGCCCTGAGAATGTCCTTTTGGTTTGGAGAAGGCAGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CCA 90 bp | CTGTGCAGCCTCACACTGCCTTCTCCAAACCAAAAGGACATTCTCAGGGCCTCTCATCCACTTGTGTGCTaGCTCTGCCAAGACACGCTT | + |
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Preference number: 2 (lower is better) Translates to: LCSLTLPSPNQKDILRASHPLVC*LCQDTL Trigger: AAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATG...AGAGGCCCTGAGAATGTCCTTTTGGTTTGGAGAAGGCAGTGTGAGGCTGCACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 72 bp | CATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTaGGAACAGATGGGAGGGCAGGGGCAGCTGCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: HPSTWKHGVHLS*EQMGGQGQLLS Trigger: GGACAGCAGCTGCCCCTGCCCTCCCATCTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 72 bp | CTCTGCCAAGACACGCTTGTCATTTCTGGGGCTCACTaGGAGTCACTGTCACAAGACGGGCTGTCCAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: LCQDTLVISGAH*ESLSQDGLSSP Trigger: GGGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR-3UTR CAA 90 bp | CACAAGACGGGCTGTCCAGCCCCGAAAGAGCACCCTTGCTCTCCACTCCCCAAAAAACATGGGGTCCACTaGTCCTGGGAACAGATGGGA | + |
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Preference number: 3 (lower is better) Translates to: HKTGCPAPKEHPCSPLPKKHGVH*SWEQMG Trigger: TCCCATCTGTTCCCAGGACAAGTGGACCCCATGTTT...TTTGGGGAGTGGAGAGCAAGGGTGCTCTTTCGGGGCTGGACAGCCCGTCTTGTG 58% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 72 bp | CCCAGTGTTCCTCCATTCTCTGCTGCCATAGTACACTaGGGCATGCCATGCAAATGCAGCTGGAGCAAGCCC | + |
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Preference number: 3 (lower is better) Translates to: PSVPPFSAAIVH*GMPCKCSWSKP Trigger: GGGCTTGCTCCAGCTGCATTTGCATGGCATGCCCCAGTGTACTATGGCAGCAGAGAATGGAGGAACACTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 72 bp | TGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTaGGGCTCACTGGGAGTCACTGTCACAAGACGGGCT | + |
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Preference number: 3 (lower is better) Translates to: CVLALPRHACHF*GSLGVTVTRRA Trigger: AGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 72 bp | AAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTaGCAAGACACGCTTGTCATTTCTGGGGCTCACTGG | + |
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Preference number: 3 (lower is better) Translates to: KTGTSHPLVCWL*QDTLVISGAHW Trigger: CCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 72 bp | GAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTaGTGGCTCTGCCAAGACACGCTTGTCATTTCTGGG | + |
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Preference number: 3 (lower is better) Translates to: EEVKTGTSHPLV*WLCQDTLVISG Trigger: CCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 72 bp | GTTCACCCCAGAGATGCATCCTTCCACATGGAAACATaGGGTCCACTTGTCCTGGGAACAGATGGGAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: VHPRDASFHMET*GPLVLGTDGRA Trigger: TGCCCTCCCATCTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGGGGTGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CCA 72 bp | GAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTaGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: EVKTGTSHPLVC*LCQDTLVISGA Trigger: AGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR GCA 72 bp | CCTTCAGCACTGCAGACCCAGTGTTCCTCCATTCTCTaGTGCCATAGTACACTGGGGCATGCCATGCAAATG | + |
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Preference number: 3 (lower is better) Translates to: PSALQTQCSSIL*CHSTLGHAMQM Trigger: CATTTGCATGGCATGCCCCAGTGTACTATGGCAGCAGAGAATGGAGGAACACTGGGTCTGCAGTGCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR TCA 72 bp | CTTAGTGGTTTTTATTTTCTTGGACTAAGGCACCGATaGATTGACTGTGCAGCCTCACACTGCCTTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: LSGFYFLGLRHR*IDCAASHCLLQ Trigger: TTGGAGAAGGCAGTGTGAGGCTGCACAGTCAATTCATCGGTGCCTTAGTCCAAGAAAATAAAAACCACTAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGCCCCGAAAGAGCACCCTCGAGCGTGGCGGGGATaGTGGCGGTGGGGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LTGSHCHKTGCPAPKEHPRAWRG*WRWGWW Trigger: CCACCACCCCCACCGCCACCATCCCCGCCACGCTCG...AGGGTGCTCTTTCGGGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | CACAAGACGGGCTGTCCAGCCCCGAAAGAGCACCCTTGCTCTCCACTCCCCAAATGCCCGCCAGAGGCCTaGAGCAGCCTGATGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: HKTGCPAPKEHPCSPLPKCPPEA*SSLMRR Trigger: CCTCCTCATCAGGCTGCTGCAGGCCTCTGGCGGGCA...TTTGGGGAGTGGAGAGCAAGGGTGCTCTTTCGGGGCTGGACAGCCCGTCTTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | GCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGCAGGGCCTCTCCCAGTaGCCTGCCCGCCAGAGGCCT | + |
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Preference number: 4 (lower is better) Translates to: ACHFWGSLGVTVTRRAVQQGLSQ*PARQRP Trigger: AGGCCTCTGGCGGGCAGGGCACTGGGAGAGGCCCTG...CTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | GGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACACCGGGGGTGGTGGTGGTaGTGGAGGCCCACATTCGGC | + |
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Preference number: 4 (lower is better) Translates to: GGQDGHFTSTCVLALPRHRGWWW*WRPTFG Trigger: GCCGAATGTGGGCCTCCACCACCACCACCACCCCCG...GTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | TGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCATCCCACGAGGGCTGTaGTCCCCAGGAGGCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: CVLALPRHACHFWGSLGVIPRGL*SPGGPA Trigger: TGCTGGGCCTCCTGGGGAGCACAGCCCTCGTGGGAT...GACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CTTCAGCACTGCAGACCCAGTGTTCCTCCATTCTCTGCTGCCATAGTACACTGGCAGCCTCAGCGAGCGTaGCGGGGATGGTGGCGGTGG | + |
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Preference number: 4 (lower is better) Translates to: LQHCRPSVPPFSAAIVHWQPQRA*RGWWRW Trigger: CCACCGCCACCATCCCCGCCACGCTCGCTGAGGCTG...CCAGTGTACTATGGCAGCAGAGAATGGAGGAACACTGGGTCTGCAGTGCTGAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR TCA 90 bp | GACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGCCACAGCAGCACCTGTaGTCCATCCCACGAGGGCTG | + |
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Preference number: 4 (lower is better) Translates to: DTLVISGAHWESLSQDGLPQQHL*SIPRGL Trigger: CAGCCCTCGTGGGATGGATCACAGGTGCTGCTGTGG...CAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | CTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCCGGACAGTCCCTCTCTaGCCAGCAGCTCCTCACTCC | + |
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Preference number: 4 (lower is better) Translates to: LMRRSRRALHIHLCAGSARTVPL*PAAPHS Trigger: GGAGTGAGGAGCTGCTGGGCAGAGAGGGACTGTCCG...GGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | CTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGCCCCGAAAGAGCACCCTTCCACGTCACAGTCCTaGCGTCCGTGGAAAAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: LTGSHCHKTGCPAPKEHPSTSQS*RPWKRQ Trigger: CTGCCTTTTCCACGGACGGCAGGACTGTGACGTGGA...AGGGTGCTCTTTCGGGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | GTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTAGGAGGCCCAGCATCTaGGAGCCGGACAGTCCCTCT | + |
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Preference number: 4 (lower is better) Translates to: VLALPRHACHFWGSLGVTRRPSI*EPDSPS Trigger: AGAGGGACTGTCCGGCTCCCAGATGCTGGGCCTCCT...AGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGAGCCAGCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | GAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACCGTGGAAAAGGCAGGTaGCCAGCAGCAGCAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: EEVKTGTSHPLVCWLCQDRGKGR*PAAAAA Trigger: TGCTGCTGCTGCTGCTGGCCACCTGCCTTTTCCACG...GTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACAGTGGCGGGGGTGGTGGTaGTGGTGGAGGCCCACATTC | + |
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Preference number: 4 (lower is better) Translates to: PEMHPSTWKHGVHLSWEQWRGWW*WWRPTF Trigger: GAATGTGGGCCTCCACCACCACCACCACCCCCGCCA...CTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | GCCATGCAAATGCAGCTGGAGCAAGCCCCAGTCTATTGTTCCCCTCGTTCACCCGACTCGGTTTCCCCCTaGAGCTGTACGGTTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: AMQMQLEQAPVYCSPRSPDSVSP*SCTVPL Trigger: GAGAGGAACCGTACAGCTGCAGGGGGAAACCGAGTC...GGGTGAACGAGGGGAACAATAGACTGGGGCTTGCTCCAGCTGCATTTGCATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CCCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACACAGTCCTGCCGTCCGTaGAAAAGGCAGGTGGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: PRDASFHMETWGPLVLGTQSCRP*KRQVAS Trigger: GCTGGCCACCTGCCTTTTCCACGGACGGCAGGACTG...TGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | TCTATTGTTCCCCTCGTTCACCCCAGAGATGCATCCTTCCACATGGAAACATGGCGGAAGGGCCAAGGCTaGGCCCGGCGGACTCGGTTT | + |
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Preference number: 4 (lower is better) Translates to: SIVPLVHPRDASFHMETWRKGQG*ARRTRF Trigger: AAACCGAGTCCGCCGGGCCCAGCCTTGGCCCTTCCG...CCATGTTTCCATGTGGAAGGATGCATCTCTGGGGTGAACGAGGGGAACAATAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACAGGGGTGGTGGTGGTGGTaGAGGCCCACATTCGGCACA | + |
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Preference number: 4 (lower is better) Translates to: PEMHPSTWKHGVHLSWEQGWWWW*RPTFGT Trigger: TGTGCCGAATGTGGGCCTCCACCACCACCACCACCC...CTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACAGGGGGTCCACTTGTCCTaGGAACAGATGGGAGGGCAG | + |
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Preference number: 4 (lower is better) Translates to: PEMHPSTWKHGVHLSWEQGVHLS*EQMGGQ Trigger: CTGCCCTCCCATCTGTTCCCAGGACAAGTGGACCCC...CTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGCCCCGAAAGAGATGCATCCTTCCACATaGAAACATGGGGTCCACTTG | + |
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Preference number: 4 (lower is better) Translates to: LGLTGSHCHKTGCPAPKEMHPST*KHGVHL Trigger: CAAGTGGACCCCATGTTTCCATGTGGAAGGATGCAT...CTCTTTCGGGGCTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR TCA 90 bp | GCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTCCAGGGACTAAGGCACCGATaGATTGACTGTGCAGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: ACHFWGSLGVTVTRRAVQGLRHR*IDCAAS Trigger: TGAGGCTGCACAGTCAATTCATCGGTGCCTTAGTCC...CTGGACAGCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | GGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACACGCTGCCATAGTACACTaGGGCATGCCATGCAAATGC | + |
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Preference number: 4 (lower is better) Translates to: GGQDGHFTSTCVLALPRHAAIVH*GMPCKC Trigger: GCATTTGCATGGCATGCCCCAGTGTACTATGGCAGC...GTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR TCA 90 bp | AAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCAAGGCACCGATGAATTaGCTGTGCAGCCTCACACTG | + |
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Preference number: 4 (lower is better) Translates to: KTRLSFLGLTGSHCHKTGKAPMN*LCSLTL Trigger: CAGTGTGAGGCTGCACAGTCAATTCATCGGTGCCTT...GCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCTTCCACATGGAAACATaGGGTCCACTTGTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: LMRRSRRALHIHLCAGSAFHMET*GPLVLG Trigger: TCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAA...GGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | AAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGTTCCTCCATTCTCTaGTGCCATAGTACACTGGGG | + |
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Preference number: 4 (lower is better) Translates to: KTRLSFLGLTGSHCHKTGCSSIL*CHSTLG Trigger: CCCCAGTGTACTATGGCAGCAGAGAATGGAGGAACA...GCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | AAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCCTTGTGTGCTGGCTCTaGCAAGACACGCTTGTCATT | + |
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Preference number: 4 (lower is better) Translates to: KTRLSFLGLTGSHCHKTGLVCWL*QDTLVI Trigger: AATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAG...GCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | TCACCCCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGATTTCTGGGGCTCACTaGGAGTCACTGTCACAAGAC | + |
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Preference number: 4 (lower is better) Translates to: SPQRCILPHGNMGSTCPGISGAH*ESLSQD Trigger: GTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAAT...CCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGGGGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CCCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACACACGCTTGTCATTTCTaGGGCTCACTGGGAGTCACT | + |
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Preference number: 4 (lower is better) Translates to: PRDASFHMETWGPLVLGTHACHF*GSLGVT Trigger: AGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTG...TGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | TCGTTCACCCCAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCCATCCACTTGTGTGCTaGCTCTGCCAAGACACGCTT | + |
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Preference number: 4 (lower is better) Translates to: SFTPEMHPSTWKHGVHLSHPLVC*LCQDTL Trigger: AAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATG...GGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTGGGGTGAACGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| 3UTR CAA 72 bp | CTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTaGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTT | + |
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Preference number: 4 (lower is better) Translates to: LMRRSRRALHIH*CAGSAKTRLSF Trigger: AAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | ATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACAGATGGGATCACATCCACTTGTGTaGTGGCTCTGCCAAGACACG | + |
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Preference number: 4 (lower is better) Translates to: MHPSTWKHGVHLSWEQMGSHPLV*WLCQDT Trigger: CGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGA...TCCCATCTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | CTGTGCAGCCTCACACTGCCTTCTCCAAACCAAAAGGACATTCTCAGGGCCTCTCCATGCAAATGCAGCTaGAGCAAGCCCCAGTCTATT | + |
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Preference number: 4 (lower is better) Translates to: LCSLTLPSPNQKDILRASPCKCS*SKPQSI Trigger: AATAGACTGGGGCTTGCTCCAGCTGCATTTGCATGG...AGAGGCCCTGAGAATGTCCTTTTGGTTTGGAGAAGGCAGTGTGAGGCTGCACAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | GGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTCGTTCACCCCAGAGATaGATCCTTCCACATGGAAAC | + |
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Preference number: 4 (lower is better) Translates to: GTSHPLVCWLCQDTLVISRSPQR*ILPHGN Trigger: GTTTCCATGTGGAAGGATGCATCTCTGGGGTGAACG...AGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR GCA 90 bp | GGCACTTCACATCCACTTGTGTGCTGGCTCTGCCAAGACACGCTTGTCATTTCTTGTGCAGCCTCACACTaGCTTCTCCAAACCAAAAGG | + |
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Preference number: 4 (lower is better) Translates to: GTSHPLVCWLCQDTLVISCAASH*LLQTKR Trigger: CCTTTTGGTTTGGAGAAGGCAGTGTGAGGCTGCACA...AGAAATGACAAGCGTGTCTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CCA 90 bp | AAGACACGCTTGTCATTTCTGGGGCTCACTGGGAGTCACTGTCACAAGACGGGCTGGTTTTTATTTTCTTaGACTAAGGCACCGATGAAT | + |
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Preference number: 4 (lower is better) Translates to: KTRLSFLGLTGSHCHKTGWFLFS*TKAPMN Trigger: ATTCATCGGTGCCTTAGTCCAAGAAAATAAAAACCA...GCCCGTCTTGTGACAGTGACTCCCAGTGAGCCCCAGAAATGACAAGCGTGTCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS CCA 90 bp | GCAGCTGCTGTCCACAGGCACCGGCGACAGCAGCCTCAGCGAGCGTaGCGGGGATGGTGGCGGTGGGGGTGGTGGTGGTGGTGGAGGTGG | + |
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Preference number: 5 (lower is better) Translates to: AAAVHRHRRQQPQRA*RGWWRWGWWWWWRW Trigger: CCACCTCCACCACCACCACCACCCCCACCGCCACCATCCCCGCCACGCTCGCTGAGGCTGCTGTCGCCGGTGCCTGTGGACAGCAGCTGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS GCA 90 bp | CCGCCGGAAGGGCCAAGGCTGGGCCCGGCGGACTCGGTTTCCCCCTaGAGCTGTACGGTTCCTCTCCACGTCACAGTCCTGCCGTCCGTG | + |
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Preference number: 5 (lower is better) Translates to: PPEGPRLGPADSVSP*SCTVPLHVTVLPSV Trigger: CACGGACGGCAGGACTGTGACGTGGAGAGGAACCGTACAGCTGCAGGGGGAAACCGAGTCCGCCGGGCCCAGCCTTGGCCCTTCCGGCGG 70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS TCA 90 bp | TGGCCAGCAGCAGCAGCAGCAGCAGGACCGCCACAGCAGCACCTGTaGTCCATCCCACGAGGGCTGTGCTCCCCAGGAGGCCCAGCATCT | + |
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Preference number: 5 (lower is better) Translates to: WPAAAAAAGPPQQHL*SIPRGLCSPGGPAS Trigger: AGATGCTGGGCCTCCTGGGGAGCACAGCCCTCGTGGGATGGATCACAGGTGCTGCTGTGGCGGTCCTGCTGCTGCTGCTGCTGCTGGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS CCA 90 bp | GGTTCCTCTCCACGTCACAGTCCTGCCGTCCGTGGAAAAGGCAGGTaGCCAGCAGCAGCAGCAGCAGCAGGACCGCCACAGCAGCACCTG | + |
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Preference number: 5 (lower is better) Translates to: GSSPRHSPAVRGKGR*PAAAAAAGPPQQHL Trigger: CAGGTGCTGCTGTGGCGGTCCTGCTGCTGCTGCTGCTGCTGGCCACCTGCCTTTTCCACGGACGGCAGGACTGTGACGTGGAGAGGAACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS GCA 90 bp | CGGTTTCCCCCTGCAGCTGTACGGTTCCTCTCCACGTCACAGTCCTaGCGTCCGTGGAAAAGGCAGGTGGCCAGCAGCAGCAGCAGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RFPPAAVRFLSTSQS*RPWKRQVASSSSSS Trigger: GCTGCTGCTGCTGCTGCTGGCCACCTGCCTTTTCCACGGACGGCAGGACTGTGACGTGGAGAGGAACCGTACAGCTGCAGGGGGAAACCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CAA 90 bp | CTGATGAGGAGGTCAAGACGGGCACTTCACATCCACTTGTGTGCTGGCTCTGCCTCTGCCAAGACACGCTaGTCATTTCTGGGGCTCACT | + |
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Preference number: 5 (lower is better) Translates to: LMRRSRRALHIHLCAGSASAKTR*SFLGLT Trigger: AGTGAGCCCCAGAAATGACAAGCGTGTCTTGGCAGA...GGCAGAGCCAGCACACAAGTGGATGTGAAGTGCCCGTCTTGACCTCCTCATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CAA 90 bp | CAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACAGAGCACTTCACATCCACTaGTGTGCTGGCTCTGCCAAG | + |
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Preference number: 5 (lower is better) Translates to: QRCILPHGNMGSTCPGNRALHIH*CAGSAK Trigger: CTTGGCAGAGCCAGCACACAAGTGGATGTGAAGTGC...TCTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS-3UTR CAA 90 bp | CAGAGATGCATCCTTCCACATGGAAACATGGGGTCCACTTGTCCTGGGAACAGAAAACATGGGGTCCACTaGTCCTGGGAACAGATGGGA | + |
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Preference number: 5 (lower is better) Translates to: QRCILPHGNMGSTCPGNRKHGVH*SWEQMG Trigger: TCCCATCTGTTCCCAGGACAAGTGGACCCCATGTTT...TCTGTTCCCAGGACAAGTGGACCCCATGTTTCCATGTGGAAGGATGCATCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS CCA 72 bp | CACCGGCGACAGCAGCCTCAGCGAGCGTGGCGGGGATaGTGGCGGTGGGGGTGGTGGTGGTGGTGGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: HRRQQPQRAWRG*WRWGWWWWWRW Trigger: CCACCTCCACCACCACCACCACCCCCACCGCCACCATCCCCGCCACGCTCGCTGAGGCTGCTGTCGCCGGTG 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS CCA 72 bp | GTCCACAGGCACCGGCGACAGCAGCCTCAGCGAGCGTaGCGGGGATGGTGGCGGTGGGGGTGGTGGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: VHRHRRQQPQRA*RGWWRWGWWWW Trigger: CCACCACCACCACCCCCACCGCCACCATCCCCGCCACGCTCGCTGAGGCTGCTGTCGCCGGTGCCTGTGGAC 74% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS CCA 72 bp | ATTCCCAGGTGGCCCCGCCGCCGGAAGGGCCAAGGCTaGGCCCGGCGGACTCGGTTTCCCCCTGCAGCTGTA | + |
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Preference number: 6 (lower is better) Translates to: IPRWPRRRKGQG*ARRTRFPPAAV Trigger: TACAGCTGCAGGGGGAAACCGAGTCCGCCGGGCCCAGCCTTGGCCCTTCCGGCGGCGGGGCCACCTGGGAAT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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| CDS CCA 72 bp | CCCACGAGGGCTGTGCTCCCCAGGAGGCCCAGCATCTaGGAGCCGGACAGTCCCTCTCTGCCCAGCAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: PTRAVLPRRPSI*EPDSPSLPSSS Trigger: GGAGCTGCTGGGCAGAGAGGGACTGTCCGGCTCCCAGATGCTGGGCCTCCTGGGGAGCACAGCCCTCGTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENST00000354323.3 |
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